Cp4.1LG04g02460 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG04g02460
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionActin-related protein 2/3 complex subunit
LocationCp4.1LG04: 7777771 .. 7783159 (+)
RNA-Seq ExpressionCp4.1LG04g02460
SyntenyCp4.1LG04g02460
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TACGTTGGCGCACAGAGAATCTTTCTTAACATACACGGCTGCTGGTTTTCGCCATGGTCGCTTTCCTTTTTGGATCGCATTCGTATTTCTGAGATCTCCCTCGCGCGCGCCTGTATTTCTCAATCACTTCTAAGACTTTTATCTTAAAAGTCCCTACCAATCGCAAATCAAATTCACCGAGAAGCTGGAATTTCGAGCCGTCGTTGATTCCTGAGAATTTCCAATATTCTCTACTGGAGCTGGGAAAACAATGACAGCAATTGCAGTTCACGGGTTCGCTCAGTGCATCACTTGCCATGCTTGGAGTCCTGATCACTCTAGTAATTAACCTTTCTCTTTTTGCTCGCTTTCTTTATTTAATCGTTCTGTTTTCTGAGGGTGAAATGGAATGGAAATGTCGAGTTTCTGTAATTTGTTTGTCCTCAGTTCAGGAAAAAGTTGAACCAAAATACTTAGACGTGGATTTTATATATTGAGATCGCGTATCTATGTTTCCTGAGCTATCAAAGAGAGGGCAATGATATCAATTCAGCTGAGCGATCTAGATTTAGTTTGCTTTATTGATGAATGATGGGAAGAACGCCAGGATAGGTTACTTGGGCTCAACCTCCACCCTGTTGAAAATACGATAACCCATACGTCTTATGGGGTAGGATACATGCTAATTATGCTGTTGACTAGCTTCACGAGATCTGTTTACTGATCTGATCATTCTGGGAATAACCAATATGTCTTATGGGGTAGGATACATGCTAAAATTCATGGAGAAATGGGCTGTTATCGAATCGGCTGCTAAGTTTTTCAGGTCACCCGGGGGACATTCGTTTGTTACTTTGTTACTTCAATGCTCTCCATTGTCTAATAATCAAAAGGACGATTTTATTCAATTGTTGTTTAGATTCATCATCTGACTGTGCTTATGCTAATGTTCTTGATATGTTTTATAGTGGTTGCATTTTGTCCCAACAACAATGAAGTTCACATTTATAAATCAGTACAAGACAACTGGGAGAGAATACATGTTCTTCAAAAGGTATCTTTTAACTTTACTGTTTCCATTTATAATTTATGAGAAAATATGAAACCTAAGGTCACTGCATTTATCTATTCATGATCGATGTTTTTTGTTTTCATTCCAATCTTTTGAGTTAGGTTAAGTGAAATCTTTCTAATGAAGGCATGTTGTTAATGTCTATTAATTTATCTACTTTGTCTGTGTCAGCACGATCAAATTATCTCTGGGATAGACTGGAGTGTGAAGTCAAACAGAATTGTGACTGCATCACATGATCGAAATTCGTAAGTGTTATCTCATATTCTTGTTTTTTTTGGTCCAGTTATTTGTACGTTCACTGGTTTCTTATCTTTTCACTTTTTTTCACTCCAGTTATCACCCCTTCCTTCCCCCAGCCTCTTCTGGCCTCTCTCAGATAATATTTTGGGAATTTTATTTATTTATATGTTCCACATTGGCCTACCAATCTCTTTTCTTTCTAGATATGTTTGGAACCTTGAAGGATCAGAATGGGTACCAACTCTTGTCATTCTTAGACTAAACCGTGCTGCACTTTGTGTTCAGTGGAGTCCAAAAGGTAGTGCAAAATGTCCTACCCTGCTCTTGCTCATCACTTATGTTATCCACATCATCCTTAAATTTCTACGTTTTGCATTATCCATCTTACCCCTAGAAAACAAGTTTGCTGTTGGAAGTGGGGCAAAAACTGTTTGCATATGCTACTATGAACAAGAGAACAATTGGTATGGCTCTTTCTCACTTTTTGTTCAAGTCATCGTGTCTATTGCCTTTATTTTACACGAAGATGGAAACTCTGCTAGATGATGAATTTATTGCTAATATTTCTTATCTGTAATCTTTTTGTTTCTTTGGCTTTGTAATCAATGCTTTAGTTTATTTTTGAATCATAATTAATTCTTATCAGAAATGAAACAACTCTTTATCATTGCTTCACCTAGTATGCTTACGCATTAGTTTTCCATATTTAACATGATCATGGTTTACCTTCCACAGGTGGGTCAGTAAACTTCTCAGGAAAAGGCATGATTCTTCTGTGACAAATGTCGCTTGGCATCCCAATAATGTTTGTTTTACCCTTCTTTCCACCGTTTCATATGAATTTATATGGACAAATTTTTTGATCTTTTTAGAAGATTTCCAGTTATATCTTAGTGCTTGCTTGTCACTTTGTTTTTCTGAGCAAAATTATGGCTGTGTTTTTCGGTTATGAATTTTCCCTTATATTTTATTCACAGCTTCTTCTTGCAACAACCTCAACGGATGGAAAATGTCGAATATTTTCCACCTTCATTAAAGGTGTTGACACAAAGTATGTAGAGAGTAGTTTAGACTGCAGTCTTCTCATGAAATATTATAGGATTGATTTAGAAGTTACTGATGCTTGATTGAAATTTCACAGGGATTCAAAAGCCGGCGCATTTTCAGATTCAAAATTCGGAGAGGTTTAATATTCAGACTTTTAATTTGCAGTGAACAAAATTTCTTGTGCTTGGAAGAGTAGAATGCTTAAATTTTTTTTTATAAAATAACTAAAAGTGTTTTTGGATTGTCATCTTTTGATTCAAATTTAAATGATTTGAATTTCTCCCTTTGGAAAAGACATGGTTCAGTATTTTTGTCCACAGTTGCTCTCTACTTTGACGAGCAAAGTAGTTCCTATTATTTATGAGCAATTTCTTTTGGTGAATTAGTTAATTGTTCAGCTCGATCTCTCATTCTCTTGGGCATTTGGCGTGAAGTGGTCACCAAGTGGCAAAACCTTAGCTTATGCAGGTTAGAAGTACCTCCTCTCTGCAAATTATTTACAGAGACAACTTTATAAGTTACAACTACAGCATATGGAATAGCAACAAGTTTGAATTTACAGAGACAAGTTTGAATTGTCTAATACATTTGCTTCTTATAGTCATACTGCCTTCCTTATAAATTGGGTAAGTTTTTTTCCATAAACATCATGGATAATACATCCATTTTGTAAATTTCAATCATCAATGAAATCGTCTCTTGTAAAAAAAAAAAAAAAAAATTCATTGGTTAGCTTCCTATAACTTGTACATAACAATTGTAACTATGAAATTTCCCCCATTATTTTAGTTACCTTTTGTTTGGGGCGTTGAAAACAATTTATAGGATTCAACTAGAGTCTCATTTTTTATGCTCTTGTTTAGATGGTGGTTTATTTGTACGCTACTGAAGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNAATTTAAATGCTGAAGGTCACAATTCGATGATTTACTTTGTTGATGAAATTGGTCCTTCCCCTCTAGCCCAGAATGTTGCACTTCGAGATTTGCCTCTTCGTGATGTGGGTCAGCATCCATTTTTCTTTACTCTTTGAGTATTTCTTATAATTATTTAAATACAATGTACTATTTCGCTTTCTAATCTTGAAGGTTTTTTGGATCAATATAACACTCTTTCAGATACTATTTGTTAGTGAGAGAATGGTTATAGGTGTAGGATTCGATTGCAATCCTATGGTTTTTGCTGCTGATGAAAGAGGGATCTGGTGAGCTAAGCTTTAAATAGATTGTGTTATCTTTAAGATATTATAATATTTTAAGGAATATGTAAAGTGATTTATCTGCTTTCCTTCCCCTCACCACAACTAGGAGCTTTATAAGATTTCTTGGTGAAAGGAAAACAGCTTCAGCTTCAAAATATGGATCCCAGGTATTGCATCCATTTAACTTTGTCGGTTAACAATTATTTTACAACTTAAGCTGGAAACAGAATGCATTGTCTACTGGCTGAATGCTTAGTAATTTTATACATCTTTTTAGTTAGGTCTGCAGATGGCCTGATCTAAATGGGTCGTTGCCTGTTCAGTTGTTCCACCCTGTCTGAATTCTCAGGTCCCAGTACTCCATACTGGGCTTGACGGGCTGCAAGTATATGGACTTAGCTTGACTTTGAATATTGGTTTCCCTGTCATTTTTAATAATATACATAAATTTGAAAATTTGAAAATAGAGTATCAAATGAAAACAATGATTTAGAAAAAAGTGTCTAGAAAAACAAACAAAAATAATAAATATTTGAAAAGAAAAAAAAGATTATTTAAATAAAGATCAATACAAAGGCTAGTGCCCTTTGCCAGTTGGTTTAACTTTCATGGCTATTTTCCACATCTTGTTTATCAACTAATAGACTTTGCCACTTGGTTTAACTAGCAAGCTGAATTTGTGAAACGCCTTTTTTTCTCAATCAGTTTTCAGAAGCATTTGGGAAGTTATATGGTCAACCGAGGCAAGGTGTTGACAATGAATCAGTTGAATCTTCAAGATTGCGCGGAATTGTCCACGAGAATTGCATAAAGTATGTAGTTATTGAATATATTTTCTGTAGCTTCTACTTGGTTGATTTTGTGAATTACTTTGATTTCCGGGAGGATGCCCCATATCCACTTAATTATTTGCTTATCCAGAGAGCCATTTGTAATCTGAGCGAATTAGCAAAAAGTGGGTATGGACATGGGGTGGCCTTCACATTGTTAAATGTGCATGACGTAATGATTTGTTTTTGAACTGTAGTTGTATTGTGCCTCTTAGAGAGCGAAGGGTTTCCACTATAAAGAGATTCAGCACTTCAGGTTTGTTAAAAGGAAGAGATATTGAACAAATCTTAGTCCTTCATTTTTATTTATGAACAAGATCTGTTGTGTGTCCTTAAGTTCTGAAGCCTTCATTTTCATGTCTCGAAAATGATCGAAACTTACGAGAAGGCTGGTTTTAATGGAAGCTATTTGCCCTGACCTTACAGGCTTGGATGGAAAAGTTGCTATTTGGGACTTGGAGGGCCAGGCTGATCTATCTCAATACTTGTGAACCTTGATTCAGTAACTTTCTCACTACCATGTAAAGAATCTTGCTCTCGGCAGAGTCAACATGCCTTGTATATCATAGCAGCTGTGAGGAACTGATTGCTTTTTCTTCTTGTAGCAGACAAGCGAGTTTGATTTTGTGTATGTATGCATTTTCAGCTAAAATTTTGCTCTTAGAGATTTCATACACATCATTGGAGTTCAATCCCTCTCATTTAGGTCTCAATTTATGTTCAGACTATTGGTTTTACATCTTCTATAATGTTCTGTCTCTCGAAATACTTCGTGTCGTTTCATATTCTGTGCCGTTTGTGTTTGATATGAAAATATCAAAATTAAACTCGGCATGAACACAGACTATACTGCAAAGAGTTGTAGTACTTGTTATTGTTCAAATTGTGGGTACCAAATGAAGAAAGACAAGATTATAACTTGTAAGTTGTA

mRNA sequence

TACGTTGGCGCACAGAGAATCTTTCTTAACATACACGGCTGCTGGTTTTCGCCATGGTCGCTTTCCTTTTTGGATCGCATTCGTATTTCTGAGATCTCCCTCGCGCGCGCCTGTATTTCTCAATCACTTCTAAGACTTTTATCTTAAAAGTCCCTACCAATCGCAAATCAAATTCACCGAGAAGCTGGAATTTCGAGCCGTCGTTGATTCCTGAGAATTTCCAATATTCTCTACTGGAGCTGGGAAAACAATGACAGCAATTGCAGTTCACGGGTTCGCTCAGTGCATCACTTGCCATGCTTGGAGTCCTGATCACTCTATGGTTGCATTTTGTCCCAACAACAATGAAGTTCACATTTATAAATCAGTACAAGACAACTGGGAGAGAATACATGTTCTTCAAAAGCACGATCAAATTATCTCTGGGATAGACTGGAGTGTGAAGTCAAACAGAATTGTGACTGCATCACATGATCGAAATTCATATGTTTGGAACCTTGAAGGATCAGAATGGGTACCAACTCTTGTCATTCTTAGACTAAACCGTGCTGCACTTTGTGTTCAGTGGAGTCCAAAAGAAAACAAGTTTGCTGTTGGAAGTGGGGCAAAAACTGTTTGCATATGCTACTATGAACAAGAGAACAATTGGTGGGTCAGTAAACTTCTCAGGAAAAGGCATGATTCTTCTGTGACAAATGTCGCTTGGCATCCCAATAATCTTCTTCTTGCAACAACCTCAACGGATGGAAAATGTCGAATATTTTCCACCTTCATTAAAGGTGTTGACACAAAGGATTCAAAAGCCGGCGCATTTTCAGATTCAAAATTCGGAGAGTTAATTGTTCAGCTCGATCTCTCATTCTCTTGGGCATTTGGCGTGAAGTGGTCACCAAGTGGCAAAACCTTAGCTTATGCAGGTCACAATTCGATGATTTACTTTGTTGATGAAATTGGTCCTTCCCCTCTAGCCCAGAATGTTGCACTTCGAGATTTGCCTCTTCGTGATATACTATTTGTTAGTGAGAGAATGGTTATAGGTGTAGGATTCGATTGCAATCCTATGGTTTTTGCTGCTGATGAAAGAGGGATCTGGAGCTTTATAAGATTTCTTGGTGAAAGGAAAACAGCTTCAGCTTCAAAATATGGATCCCAGTTTTCAGAAGCATTTGGGAAGTTATATGGTCAACCGAGGCAAGGTGTTGACAATGAATCAGTTGAATCTTCAAGATTGCGCGGAATTGTCCACGAGAATTGCATAAATTGTATTGTGCCTCTTAGAGAGCGAAGGGTTTCCACTATAAAGAGATTCAGCACTTCAGGCTTGGATGGAAAAGTTGCTATTTGGGACTTGGAGGGCCAGGCTGATCTATCTCAATACTTGTGAACCTTGATTCAGTAACTTTCTCACTACCATGTAAAGAATCTTGCTCTCGGCAGAGTCAACATGCCTTGTATATCATAGCAGCTGTGAGGAACTGATTGCTTTTTCTTCTTGTAGCAGACAAGCGAGTTTGATTTTGTGTATGTATGCATTTTCAGCTAAAATTTTGCTCTTAGAGATTTCATACACATCATTGGAGTTCAATCCCTCTCATTTAGGTCTCAATTTATGTTCAGACTATTGGTTTTACATCTTCTATAATGTTCTGTCTCTCGAAATACTTCGTGTCGTTTCATATTCTGTGCCGTTTGTGTTTGATATGAAAATATCAAAATTAAACTCGGCATGAACACAGACTATACTGCAAAGAGTTGTAGTACTTGTTATTGTTCAAATTGTGGGTACCAAATGAAGAAAGACAAGATTATAACTTGTAAGTTGTA

Coding sequence (CDS)

ATGACAGCAATTGCAGTTCACGGGTTCGCTCAGTGCATCACTTGCCATGCTTGGAGTCCTGATCACTCTATGGTTGCATTTTGTCCCAACAACAATGAAGTTCACATTTATAAATCAGTACAAGACAACTGGGAGAGAATACATGTTCTTCAAAAGCACGATCAAATTATCTCTGGGATAGACTGGAGTGTGAAGTCAAACAGAATTGTGACTGCATCACATGATCGAAATTCATATGTTTGGAACCTTGAAGGATCAGAATGGGTACCAACTCTTGTCATTCTTAGACTAAACCGTGCTGCACTTTGTGTTCAGTGGAGTCCAAAAGAAAACAAGTTTGCTGTTGGAAGTGGGGCAAAAACTGTTTGCATATGCTACTATGAACAAGAGAACAATTGGTGGGTCAGTAAACTTCTCAGGAAAAGGCATGATTCTTCTGTGACAAATGTCGCTTGGCATCCCAATAATCTTCTTCTTGCAACAACCTCAACGGATGGAAAATGTCGAATATTTTCCACCTTCATTAAAGGTGTTGACACAAAGGATTCAAAAGCCGGCGCATTTTCAGATTCAAAATTCGGAGAGTTAATTGTTCAGCTCGATCTCTCATTCTCTTGGGCATTTGGCGTGAAGTGGTCACCAAGTGGCAAAACCTTAGCTTATGCAGGTCACAATTCGATGATTTACTTTGTTGATGAAATTGGTCCTTCCCCTCTAGCCCAGAATGTTGCACTTCGAGATTTGCCTCTTCGTGATATACTATTTGTTAGTGAGAGAATGGTTATAGGTGTAGGATTCGATTGCAATCCTATGGTTTTTGCTGCTGATGAAAGAGGGATCTGGAGCTTTATAAGATTTCTTGGTGAAAGGAAAACAGCTTCAGCTTCAAAATATGGATCCCAGTTTTCAGAAGCATTTGGGAAGTTATATGGTCAACCGAGGCAAGGTGTTGACAATGAATCAGTTGAATCTTCAAGATTGCGCGGAATTGTCCACGAGAATTGCATAAATTGTATTGTGCCTCTTAGAGAGCGAAGGGTTTCCACTATAAAGAGATTCAGCACTTCAGGCTTGGATGGAAAAGTTGCTATTTGGGACTTGGAGGGCCAGGCTGATCTATCTCAATACTTGTGA

Protein sequence

MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGIDWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDTKDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLAQNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKTASASKYGSQFSEAFGKLYGQPRQGVDNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLEGQADLSQYL
Homology
[Close]
BLAST of Cp4.1LG04g02460 vs. ExPASy Swiss-Prot
Match: O80856 (Actin-related protein 2/3 complex subunit 1A OS=Arabidopsis thaliana OX=3702 GN=ARPC1A PE=2 SV=1)

HSP 1 Score: 609.8 bits (1571), Expect = 2.1e-173
Identity = 286/370 (77.30%), Postives = 326/370 (88.11%), Query Frame = 0 

Query: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSV-QDNWERIHVLQKHDQIISG 60
           M  + VH FA+ ITCHAWSPD SMVA CPNN EVHIYKS+ QD+WER+HVLQKHDQI+SG
Sbjct: 1   MAVVDVHRFAESITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSG 60

Query: 61  IDWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120
           IDWS KSN+IVT SHDRNSYVW+LEG+EWVPTLVILRLNRAALCVQWSPKENKFAVGSGA
Sbjct: 61  IDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120

Query: 121 KTVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVD 180
           KTVCICYYEQENNWWVSKL+RKRH+SSVT+VAWHPNN+LLATTSTDGKCR+FSTFIKGVD
Sbjct: 121 KTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIKGVD 180

Query: 181 TKDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPL 240
           TKDSKAG+ +++KFGE I+QLDLS+SWAFGVKWSPSG TLAY GH+SMIYFVD++GPSPL
Sbjct: 181 TKDSKAGSPAETKFGEQILQLDLSYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPSPL 240

Query: 241 AQNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKTASA-SKY 300
           AQ+VA RDLPLRD+LF+SE+MVIGVG+D NPMVFA+D+ GIWSFIR++GE+K AS+ S Y
Sbjct: 241 AQSVAFRDLPLRDVLFISEKMVIGVGYDSNPMVFASDDTGIWSFIRYIGEKKAASSNSSY 300

Query: 301 GSQFSEAFGKLYGQPRQGVDNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGL 360
            SQFSEAFGK YG   Q     + ++S  RG VH+NCIN IV L +     + RFSTSGL
Sbjct: 301 SSQFSEAFGKFYGS--QSKSTTANDASESRGGVHDNCINSIVSLSKAGSPKVMRFSTSGL 360

Query: 361 DGKVAIWDLE 369
           DGKVAIWDLE
Sbjct: 361 DGKVAIWDLE 368

[Close]
BLAST of Cp4.1LG04g02460 vs. ExPASy Swiss-Prot
Match: Q9SJW6 (Actin-related protein 2/3 complex subunit 1B OS=Arabidopsis thaliana OX=3702 GN=ARPC1B PE=2 SV=1)

HSP 1 Score: 605.9 bits (1561), Expect = 3.1e-172
Identity = 285/370 (77.03%), Postives = 325/370 (87.84%), Query Frame = 0 

Query: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSV-QDNWERIHVLQKHDQIISG 60
           M  + VH FA+ ITCHAWSPD SMVA CPNN EVHIYKS+ QD+WER+HVLQKHDQI+SG
Sbjct: 1   MAVVDVHRFAESITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSG 60

Query: 61  IDWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120
           IDWS KSN+IVT SHDRNSYVW+LEG+EWVPTLVILRLNRAALCVQWSPKENKFAVGSGA
Sbjct: 61  IDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120

Query: 121 KTVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVD 180
           KTVCICYYEQENNWWVSKL+RKRH+SSVT+VAWHPNN+LLATTSTDGKCR+FSTFIKGVD
Sbjct: 121 KTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIKGVD 180

Query: 181 TKDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPL 240
           TKDSKAG+ +++KFGE I+QLDLS+SWAFGVKWSPSG TLAY GH+SMIYFVD++GPSPL
Sbjct: 181 TKDSKAGSPAETKFGEQILQLDLSYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPSPL 240

Query: 241 AQNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKTASA-SKY 300
           AQ+VA RDLPLRD+LF+SE+MVIGVG+D NPMVFAAD+ GIWSFIR++GE+K AS+ S Y
Sbjct: 241 AQSVAFRDLPLRDVLFISEKMVIGVGYDSNPMVFAADDTGIWSFIRYIGEKKAASSGSSY 300

Query: 301 GSQFSEAFGKLYGQPRQGVDNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGL 360
            SQFSEAFGK YG   Q     + ++S  RG VH+N I  IVPL +     + RFSTSGL
Sbjct: 301 SSQFSEAFGKFYGS--QSKSTTANDASDSRGGVHDNSITSIVPLGKGGSPKVMRFSTSGL 360

Query: 361 DGKVAIWDLE 369
           DGK+AIWDLE
Sbjct: 361 DGKIAIWDLE 368

[Close]
BLAST of Cp4.1LG04g02460 vs. ExPASy Swiss-Prot
Match: O96622 (Actin-related protein 2/3 complex subunit 1 OS=Dictyostelium discoideum OX=44689 GN=arcA PE=1 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 1.7e-90
Identity = 162/369 (43.90%), Postives = 233/369 (63.14%), Query Frame = 0 

Query: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI 60
           M+A  +   A CIT HAW+ D S VA CPNNNEVHIY     +W   HVL +HDQ+++ I
Sbjct: 1   MSAFEIEHLASCITAHAWNADRSRVALCPNNNEVHIYAKQGTSWVVEHVLAEHDQLVTSI 60

Query: 61  DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120
           DW+ K+NRI+T+S DRN+YVW  +  +W P LV+LR+NRAA  V+WSP+ENKFAV +GAK
Sbjct: 61  DWAPKTNRILTSSQDRNAYVWTFKDGQWKPVLVLLRINRAATHVKWSPQENKFAVATGAK 120

Query: 121 TVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180
            VCIC++E+E++WW S  + K+H S+V  V WHPNNLLLAT+S+D K R+F  +IK  D 
Sbjct: 121 LVCICFFEEEHDWWASNHI-KKHKSTVLKVDWHPNNLLLATSSSDYKVRVFDAYIKKADG 180

Query: 181 KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA 240
           + S    + +  FGE + + D   SW   +KWSPSG TLAY+ H+ +    +     P  
Sbjct: 181 R-SVTRPYGEVAFGEPVFEFDQCASWVHALKWSPSGSTLAYSSHDGVFAVANFSTNPPTI 240

Query: 241 QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKTASASKYGS 300
           + + +R+LPLRD+L+++E  + GVG+DC P++   ++ G W   ++ GE   AS     +
Sbjct: 241 EKLRVRNLPLRDLLYITENSIAGVGYDCAPLLI-TNQNG-W---KYSGEMDKASEGGAAA 300

Query: 301 QFSEAFGKLYGQPRQGVD-NESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLD 360
               +  KL+   +  VD  ES  + +    VH+NCI  IVP +      +  FSTSGLD
Sbjct: 301 GSETSARKLF---QNKVDLGESKSADKKLTTVHQNCITSIVPFKSVG-GVVSDFSTSGLD 358

Query: 361 GKVAIWDLE 369
           G + +W ++
Sbjct: 361 GNIVVWHVK 358

[Close]
BLAST of Cp4.1LG04g02460 vs. ExPASy Swiss-Prot
Match: Q7ZXD5 (Actin-related protein 2/3 complex subunit 1B-A OS=Xenopus laevis OX=8355 GN=arpc1b-a PE=2 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 6.8e-79
Identity = 155/367 (42.23%), Postives = 226/367 (61.58%), Query Frame = 0 

Query: 4   IAVHGF-AQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGIDW 63
           +A H F  + ITCHAW+ D + +AFCPN+++VHIYK   D W +IH L++H+  ++GIDW
Sbjct: 1   MAYHSFLLEPITCHAWNKDATQIAFCPNSHDVHIYKKDGDKWSKIHELKEHNGHVTGIDW 60

Query: 64  SVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 123
           + +SNRIVT   DRN+YVW L+ + W PTLVILR+NRAA CV+WSPKENKFAVGSG++ +
Sbjct: 61  APESNRIVTCGTDRNAYVWTLKNNVWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLI 120

Query: 124 CICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDTKD 183
            ICY+EQEN+WWV K ++K   S+V ++ WHPNN+LLA  S+D K RIFS +IK V+ + 
Sbjct: 121 SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSSDFKSRIFSAYIKEVEERP 180

Query: 184 SKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLAQN 243
           +     S   FGEL+ +   S  W   V +S SG  +A+  H+S I   D      +  +
Sbjct: 181 APTPWGSKMPFGELMFESSSSCGWVHSVCFSHSGDRMAWVSHDSTICISDATKKMRVT-S 240

Query: 244 VALRDLPLRDILFVSERMVIGVGFDCNPMVFAADE-RGIWSFIRFLGERKTASASKYGSQ 303
           +    LPL  + F++E  ++  G DC P+++  DE +G  SF   L   K   +S+ G  
Sbjct: 241 LITDTLPLLCVTFITENSLVAAGHDCFPVLYIYDEAQGTLSFGGKLDIPK--QSSQRGMT 300

Query: 304 FSEAFGKLYGQPRQGVDNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDGK 363
             E F  L  +     +N +++S      +H+N I+ +  L   +    K F T+GLDG 
Sbjct: 301 ARERFQNLDKKASSDTNNITLDS------LHKNSISQLSVLSGGKAKCSK-FCTTGLDGG 357

Query: 364 VAIWDLE 369
           + IWD++
Sbjct: 361 MCIWDVK 357

[Close]
BLAST of Cp4.1LG04g02460 vs. ExPASy Swiss-Prot
Match: Q9WV32 (Actin-related protein 2/3 complex subunit 1B OS=Mus musculus OX=10090 GN=Arpc1b PE=1 SV=4)

HSP 1 Score: 295.0 bits (754), Expect = 1.2e-78
Identity = 149/367 (40.60%), Postives = 223/367 (60.76%), Query Frame = 0 

Query: 4   IAVHGF-AQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGIDW 63
           +A H F  + I+CHAW+ D + +A CPNN+EVHIY+     W ++H L++H+  ++GIDW
Sbjct: 1   MAYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGAKWNKVHELKEHNGQVTGIDW 60

Query: 64  SVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 123
           + +SNRIVT   DRN+YVW L+G  W PTLVILR+NRAA CV+W+P ENKFAVGSG++ +
Sbjct: 61  APESNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRVI 120

Query: 124 CICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDTKD 183
            ICY+EQEN+WWV K ++K   S+V ++ WHPNN+LLA  S D KCRIFS +IK V+ + 
Sbjct: 121 SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERP 180

Query: 184 SKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLAQN 243
           +     S   FGEL+ +   S  W  GV +S SG  +A+  H+S +  VD      +A  
Sbjct: 181 APTPWGSKMPFGELMFESSSSCGWVHGVCFSASGSRVAWVSHDSTVCLVDADKKMAVA-T 240

Query: 244 VALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKT-ASASKYGSQ 303
           +A   LPL  + F++E  ++  G DC P++F  D   +   + F G       +S+ G  
Sbjct: 241 LASETLPLLAVTFITENSLVAAGHDCFPVLFTYDNAAV--TLSFGGRLDVPKQSSQRGMT 300

Query: 304 FSEAFGKLYGQPRQGVDNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDGK 363
             E F  L    +   +  +   + L  + H+N ++ I  L   + +   +F T+G+DG 
Sbjct: 301 ARERFQNL--DKKASSEGGAATGAGLDSL-HKNSVSQISVLSGGK-AKCSQFCTTGMDGG 360

Query: 364 VAIWDLE 369
           ++IWD++
Sbjct: 361 MSIWDVK 360

[Close]
BLAST of Cp4.1LG04g02460 vs. NCBI nr
Match: XP_023531973.1 (actin-related protein 2/3 complex subunit 1A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 781 bits (2016), Expect = 2.80e-285
Identity = 377/377 (100.00%), Postives = 377/377 (100.00%), Query Frame = 0 

Query: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI 60
           MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI
Sbjct: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI 60

Query: 61  DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120
           DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK
Sbjct: 61  DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120

Query: 121 TVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180
           TVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT
Sbjct: 121 TVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180

Query: 181 KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA 240
           KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA
Sbjct: 181 KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA 240

Query: 241 QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKTASASKYGS 300
           QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKTASASKYGS
Sbjct: 241 QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKTASASKYGS 300

Query: 301 QFSEAFGKLYGQPRQGVDNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDG 360
           QFSEAFGKLYGQPRQGVDNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDG
Sbjct: 301 QFSEAFGKLYGQPRQGVDNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDG 360

Query: 361 KVAIWDLEGQADLSQYL 377
           KVAIWDLEGQADLSQYL
Sbjct: 361 KVAIWDLEGQADLSQYL 377

[Close]
BLAST of Cp4.1LG04g02460 vs. NCBI nr
Match: XP_022930887.1 (actin-related protein 2/3 complex subunit 1A-like [Cucurbita moschata] >KAG6589287.1 Actin-related protein 2/3 complex subunit 1A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 776 bits (2003), Expect = 2.69e-283
Identity = 375/377 (99.47%), Postives = 375/377 (99.47%), Query Frame = 0 

Query: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI 60
           MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI
Sbjct: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI 60

Query: 61  DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120
           DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK
Sbjct: 61  DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120

Query: 121 TVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180
           TVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT
Sbjct: 121 TVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180

Query: 181 KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA 240
           KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA
Sbjct: 181 KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA 240

Query: 241 QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKTASASKYGS 300
           QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERK ASASKYGS
Sbjct: 241 QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGS 300

Query: 301 QFSEAFGKLYGQPRQGVDNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDG 360
           QFSEAFGKLYGQPRQGV NESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDG
Sbjct: 301 QFSEAFGKLYGQPRQGVGNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDG 360

Query: 361 KVAIWDLEGQADLSQYL 377
           KVAIWDLEGQADLSQYL
Sbjct: 361 KVAIWDLEGQADLSQYL 377

[Close]
BLAST of Cp4.1LG04g02460 vs. NCBI nr
Match: XP_022989257.1 (actin-related protein 2/3 complex subunit 1A-like [Cucurbita maxima])

HSP 1 Score: 773 bits (1996), Expect = 3.14e-282
Identity = 373/377 (98.94%), Postives = 374/377 (99.20%), Query Frame = 0 

Query: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI 60
           MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI
Sbjct: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI 60

Query: 61  DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120
           DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK
Sbjct: 61  DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120

Query: 121 TVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180
           TVCICYYEQENNWWVSKL+RKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT
Sbjct: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180

Query: 181 KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA 240
           KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA
Sbjct: 181 KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA 240

Query: 241 QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKTASASKYGS 300
           QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKTASASKYGS
Sbjct: 241 QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKTASASKYGS 300

Query: 301 QFSEAFGKLYGQPRQGVDNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDG 360
           QFSEAFGKLYGQPRQ V NESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDG
Sbjct: 301 QFSEAFGKLYGQPRQDVGNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDG 360

Query: 361 KVAIWDLEGQADLSQYL 377
           KV IWDLEGQADLSQYL
Sbjct: 361 KVVIWDLEGQADLSQYL 377

[Close]
BLAST of Cp4.1LG04g02460 vs. NCBI nr
Match: XP_038886984.1 (actin-related protein 2/3 complex subunit 1A-like [Benincasa hispida])

HSP 1 Score: 745 bits (1924), Expect = 2.97e-271
Identity = 355/377 (94.16%), Postives = 365/377 (96.82%), Query Frame = 0 

Query: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI 60
           MTAIAVH FA+CITCHAWSPDHSMVAFCPNNNEVHIYKS+QDNWER+HVLQKHDQ+ISGI
Sbjct: 1   MTAIAVHQFAECITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQLISGI 60

Query: 61  DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120
           DWSV+SNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK
Sbjct: 61  DWSVRSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120

Query: 121 TVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180
           TVCICYYEQENNWWVSKL+RKRHDSSVTNVAWHPNNLLLATTSTDGKCRIF+TFIKGVDT
Sbjct: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFATFIKGVDT 180

Query: 181 KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA 240
           KDS+AG FSDSKFGELIVQLDLSFSWAFGVKWSPSG TLAYAGHNSMIYFVDE+GPSPLA
Sbjct: 181 KDSRAGTFSDSKFGELIVQLDLSFSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA 240

Query: 241 QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKTASASKYGS 300
           QNVA RDLPLRDILFVSERMVIGVGFDCNPM FAADERGIWSFIRFLGERK AS SKYGS
Sbjct: 241 QNVAFRDLPLRDILFVSERMVIGVGFDCNPMAFAADERGIWSFIRFLGERKPASGSKYGS 300

Query: 301 QFSEAFGKLYGQPRQGVDNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDG 360
           QFSEAFGKLYGQPRQGV N+SVESSRLRG VHENCIN IVPLRER VSTIKRFSTSGLDG
Sbjct: 301 QFSEAFGKLYGQPRQGVGNDSVESSRLRGCVHENCINSIVPLRERGVSTIKRFSTSGLDG 360

Query: 361 KVAIWDLEGQADLSQYL 377
           KV IWDLEGQADLSQYL
Sbjct: 361 KVVIWDLEGQADLSQYL 377

[Close]
BLAST of Cp4.1LG04g02460 vs. NCBI nr
Match: XP_008449504.1 (PREDICTED: actin-related protein 2/3 complex subunit 1A-like [Cucumis melo])

HSP 1 Score: 745 bits (1924), Expect = 2.97e-271
Identity = 354/377 (93.90%), Postives = 365/377 (96.82%), Query Frame = 0 

Query: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI 60
           MTAIAVH FAQCITCHAWSPDHSMVAFCPNNNEVHIYKS+QDNWER+HVLQKHDQ+ISGI
Sbjct: 1   MTAIAVHQFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQLISGI 60

Query: 61  DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120
           DWSV+SNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK
Sbjct: 61  DWSVRSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120

Query: 121 TVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180
           TVCICYYEQENNWWVSKL+RKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT
Sbjct: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180

Query: 181 KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA 240
           KDS+AG FSDSKFGELIVQLDLSFSWAFGVKWSPSG TLAYAGHNSMIYFVDE+GPSPLA
Sbjct: 181 KDSRAGTFSDSKFGELIVQLDLSFSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA 240

Query: 241 QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKTASASKYGS 300
           QNVA RDLPLRDILFVSERMVIGVGFDC+PM FAADERGIWSF+RFLGERKTAS SKYGS
Sbjct: 241 QNVAFRDLPLRDILFVSERMVIGVGFDCHPMAFAADERGIWSFVRFLGERKTASGSKYGS 300

Query: 301 QFSEAFGKLYGQPRQGVDNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDG 360
           QFSEAFGKLYGQPRQGV N+SVESSRLRG VHENCINCIVPL+E  VSTIKRFSTSGLDG
Sbjct: 301 QFSEAFGKLYGQPRQGVGNDSVESSRLRGCVHENCINCIVPLKEPGVSTIKRFSTSGLDG 360

Query: 361 KVAIWDLEGQADLSQYL 377
           KV IWDLEGQ DLSQYL
Sbjct: 361 KVVIWDLEGQDDLSQYL 377

[Close]
BLAST of Cp4.1LG04g02460 vs. ExPASy TrEMBL
Match: A0A6J1ERW9 (Actin-related protein 2/3 complex subunit OS=Cucurbita moschata OX=3662 GN=LOC111437237 PE=3 SV=1)

HSP 1 Score: 776 bits (2003), Expect = 1.30e-283
Identity = 375/377 (99.47%), Postives = 375/377 (99.47%), Query Frame = 0 

Query: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI 60
           MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI
Sbjct: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI 60

Query: 61  DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120
           DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK
Sbjct: 61  DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120

Query: 121 TVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180
           TVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT
Sbjct: 121 TVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180

Query: 181 KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA 240
           KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA
Sbjct: 181 KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA 240

Query: 241 QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKTASASKYGS 300
           QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERK ASASKYGS
Sbjct: 241 QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGS 300

Query: 301 QFSEAFGKLYGQPRQGVDNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDG 360
           QFSEAFGKLYGQPRQGV NESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDG
Sbjct: 301 QFSEAFGKLYGQPRQGVGNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDG 360

Query: 361 KVAIWDLEGQADLSQYL 377
           KVAIWDLEGQADLSQYL
Sbjct: 361 KVAIWDLEGQADLSQYL 377

[Close]
BLAST of Cp4.1LG04g02460 vs. ExPASy TrEMBL
Match: A0A6J1JFB5 (Actin-related protein 2/3 complex subunit OS=Cucurbita maxima OX=3661 GN=LOC111486386 PE=3 SV=1)

HSP 1 Score: 773 bits (1996), Expect = 1.52e-282
Identity = 373/377 (98.94%), Postives = 374/377 (99.20%), Query Frame = 0 

Query: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI 60
           MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI
Sbjct: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI 60

Query: 61  DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120
           DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK
Sbjct: 61  DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120

Query: 121 TVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180
           TVCICYYEQENNWWVSKL+RKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT
Sbjct: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180

Query: 181 KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA 240
           KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA
Sbjct: 181 KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA 240

Query: 241 QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKTASASKYGS 300
           QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKTASASKYGS
Sbjct: 241 QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKTASASKYGS 300

Query: 301 QFSEAFGKLYGQPRQGVDNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDG 360
           QFSEAFGKLYGQPRQ V NESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDG
Sbjct: 301 QFSEAFGKLYGQPRQDVGNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDG 360

Query: 361 KVAIWDLEGQADLSQYL 377
           KV IWDLEGQADLSQYL
Sbjct: 361 KVVIWDLEGQADLSQYL 377

[Close]
BLAST of Cp4.1LG04g02460 vs. ExPASy TrEMBL
Match: A0A1S3BM68 (Actin-related protein 2/3 complex subunit OS=Cucumis melo OX=3656 GN=LOC103491371 PE=3 SV=1)

HSP 1 Score: 745 bits (1924), Expect = 1.44e-271
Identity = 354/377 (93.90%), Postives = 365/377 (96.82%), Query Frame = 0 

Query: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI 60
           MTAIAVH FAQCITCHAWSPDHSMVAFCPNNNEVHIYKS+QDNWER+HVLQKHDQ+ISGI
Sbjct: 1   MTAIAVHQFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQLISGI 60

Query: 61  DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120
           DWSV+SNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK
Sbjct: 61  DWSVRSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120

Query: 121 TVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180
           TVCICYYEQENNWWVSKL+RKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT
Sbjct: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180

Query: 181 KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA 240
           KDS+AG FSDSKFGELIVQLDLSFSWAFGVKWSPSG TLAYAGHNSMIYFVDE+GPSPLA
Sbjct: 181 KDSRAGTFSDSKFGELIVQLDLSFSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA 240

Query: 241 QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKTASASKYGS 300
           QNVA RDLPLRDILFVSERMVIGVGFDC+PM FAADERGIWSF+RFLGERKTAS SKYGS
Sbjct: 241 QNVAFRDLPLRDILFVSERMVIGVGFDCHPMAFAADERGIWSFVRFLGERKTASGSKYGS 300

Query: 301 QFSEAFGKLYGQPRQGVDNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDG 360
           QFSEAFGKLYGQPRQGV N+SVESSRLRG VHENCINCIVPL+E  VSTIKRFSTSGLDG
Sbjct: 301 QFSEAFGKLYGQPRQGVGNDSVESSRLRGCVHENCINCIVPLKEPGVSTIKRFSTSGLDG 360

Query: 361 KVAIWDLEGQADLSQYL 377
           KV IWDLEGQ DLSQYL
Sbjct: 361 KVVIWDLEGQDDLSQYL 377

[Close]
BLAST of Cp4.1LG04g02460 vs. ExPASy TrEMBL
Match: A0A6J1GLX8 (Actin-related protein 2/3 complex subunit OS=Cucurbita moschata OX=3662 GN=LOC111455454 PE=3 SV=1)

HSP 1 Score: 738 bits (1904), Expect = 1.61e-268
Identity = 352/377 (93.37%), Postives = 362/377 (96.02%), Query Frame = 0 

Query: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI 60
           MTAIAVH FAQCITCHAWSPDHSMVAFCPNNNEVHIYKS+QDNWER+HVLQKHDQ+ISGI
Sbjct: 1   MTAIAVHQFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQLISGI 60

Query: 61  DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120
           DWSV+SNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK
Sbjct: 61  DWSVRSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120

Query: 121 TVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180
           TVCICYYEQENNWWVSKL+RKRHDSSVTNVAWH NNLLLATTSTDGKCRIFSTFIKGVDT
Sbjct: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHTNNLLLATTSTDGKCRIFSTFIKGVDT 180

Query: 181 KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA 240
           KDS+AG FSDSKFGELIVQLDLSFSWAFGVKWSPSG TLAYAGHNSMIYFVDE+GPSPLA
Sbjct: 181 KDSRAGKFSDSKFGELIVQLDLSFSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA 240

Query: 241 QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKTASASKYGS 300
           Q+VA RDLPLRDILFVSERMVIG GFDCNPM FAADERGIWSFIRFLGERKTAS SKYGS
Sbjct: 241 QSVAFRDLPLRDILFVSERMVIGTGFDCNPMAFAADERGIWSFIRFLGERKTASGSKYGS 300

Query: 301 QFSEAFGKLYGQPRQGVDNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDG 360
           QFSEAFGKLYGQ +QGV N+SVESSRLRG VHENCI CIVPLRE  VSTIKRFSTSGLDG
Sbjct: 301 QFSEAFGKLYGQSKQGVGNDSVESSRLRGCVHENCITCIVPLREPGVSTIKRFSTSGLDG 360

Query: 361 KVAIWDLEGQADLSQYL 377
           KV IWDLEGQADLSQYL
Sbjct: 361 KVVIWDLEGQADLSQYL 377

[Close]
BLAST of Cp4.1LG04g02460 vs. ExPASy TrEMBL
Match: A0A6J1D3Z7 (Actin-related protein 2/3 complex subunit OS=Momordica charantia OX=3673 GN=LOC111016823 PE=3 SV=1)

HSP 1 Score: 733 bits (1893), Expect = 7.64e-267
Identity = 349/377 (92.57%), Postives = 359/377 (95.23%), Query Frame = 0 

Query: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI 60
           MTAIAVH FAQCITCHAWSPD SMVAFCPNNNEVHIYKS+QDNWER+HVLQKHDQIISGI
Sbjct: 1   MTAIAVHQFAQCITCHAWSPDRSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGI 60

Query: 61  DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120
           DWSV+SN+IVTASHDRNSYVWNLE SEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK
Sbjct: 61  DWSVRSNKIVTASHDRNSYVWNLEKSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120

Query: 121 TVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180
           TVCICYYEQENNWWVSKL+RKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVD 
Sbjct: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDK 180

Query: 181 KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA 240
           KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSG TLAYAGHNSMIYFVDE+GPSPLA
Sbjct: 181 KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA 240

Query: 241 QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKTASASKYGS 300
           QNV  RDLPLRDILFVSERMVIGVG+DCNPMVFAADERGIWSFIRFLGERK  S S YGS
Sbjct: 241 QNVPFRDLPLRDILFVSERMVIGVGYDCNPMVFAADERGIWSFIRFLGERKATSGSNYGS 300

Query: 301 QFSEAFGKLYGQPRQGVDNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDG 360
           QFSEAFGKLYGQP+ GV N+SVESSRLRG VHENCINCIVPLRE + STIKRFSTSGLDG
Sbjct: 301 QFSEAFGKLYGQPKHGVGNDSVESSRLRGCVHENCINCIVPLREPKASTIKRFSTSGLDG 360

Query: 361 KVAIWDLEGQADLSQYL 377
           KV IWDLEGQ DLSQYL
Sbjct: 361 KVVIWDLEGQGDLSQYL 377

[Close]
BLAST of Cp4.1LG04g02460 vs. TAIR 10
Match: AT2G30910.1 (actin-related protein C1A )

HSP 1 Score: 609.8 bits (1571), Expect = 1.5e-174
Identity = 286/370 (77.30%), Postives = 326/370 (88.11%), Query Frame = 0 

Query: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSV-QDNWERIHVLQKHDQIISG 60
           M  + VH FA+ ITCHAWSPD SMVA CPNN EVHIYKS+ QD+WER+HVLQKHDQI+SG
Sbjct: 1   MAVVDVHRFAESITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSG 60

Query: 61  IDWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120
           IDWS KSN+IVT SHDRNSYVW+LEG+EWVPTLVILRLNRAALCVQWSPKENKFAVGSGA
Sbjct: 61  IDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120

Query: 121 KTVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVD 180
           KTVCICYYEQENNWWVSKL+RKRH+SSVT+VAWHPNN+LLATTSTDGKCR+FSTFIKGVD
Sbjct: 121 KTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIKGVD 180

Query: 181 TKDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPL 240
           TKDSKAG+ +++KFGE I+QLDLS+SWAFGVKWSPSG TLAY GH+SMIYFVD++GPSPL
Sbjct: 181 TKDSKAGSPAETKFGEQILQLDLSYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPSPL 240

Query: 241 AQNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKTASA-SKY 300
           AQ+VA RDLPLRD+LF+SE+MVIGVG+D NPMVFA+D+ GIWSFIR++GE+K AS+ S Y
Sbjct: 241 AQSVAFRDLPLRDVLFISEKMVIGVGYDSNPMVFASDDTGIWSFIRYIGEKKAASSNSSY 300

Query: 301 GSQFSEAFGKLYGQPRQGVDNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGL 360
            SQFSEAFGK YG   Q     + ++S  RG VH+NCIN IV L +     + RFSTSGL
Sbjct: 301 SSQFSEAFGKFYGS--QSKSTTANDASESRGGVHDNCINSIVSLSKAGSPKVMRFSTSGL 360

Query: 361 DGKVAIWDLE 369
           DGKVAIWDLE
Sbjct: 361 DGKVAIWDLE 368

[Close]
BLAST of Cp4.1LG04g02460 vs. TAIR 10
Match: AT2G30910.3 (actin-related protein C1A )

HSP 1 Score: 609.8 bits (1571), Expect = 1.5e-174
Identity = 286/370 (77.30%), Postives = 326/370 (88.11%), Query Frame = 0 

Query: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSV-QDNWERIHVLQKHDQIISG 60
           M  + VH FA+ ITCHAWSPD SMVA CPNN EVHIYKS+ QD+WER+HVLQKHDQI+SG
Sbjct: 1   MAVVDVHRFAESITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSG 60

Query: 61  IDWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120
           IDWS KSN+IVT SHDRNSYVW+LEG+EWVPTLVILRLNRAALCVQWSPKENKFAVGSGA
Sbjct: 61  IDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120

Query: 121 KTVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVD 180
           KTVCICYYEQENNWWVSKL+RKRH+SSVT+VAWHPNN+LLATTSTDGKCR+FSTFIKGVD
Sbjct: 121 KTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIKGVD 180

Query: 181 TKDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPL 240
           TKDSKAG+ +++KFGE I+QLDLS+SWAFGVKWSPSG TLAY GH+SMIYFVD++GPSPL
Sbjct: 181 TKDSKAGSPAETKFGEQILQLDLSYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPSPL 240

Query: 241 AQNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKTASA-SKY 300
           AQ+VA RDLPLRD+LF+SE+MVIGVG+D NPMVFA+D+ GIWSFIR++GE+K AS+ S Y
Sbjct: 241 AQSVAFRDLPLRDVLFISEKMVIGVGYDSNPMVFASDDTGIWSFIRYIGEKKAASSNSSY 300

Query: 301 GSQFSEAFGKLYGQPRQGVDNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGL 360
            SQFSEAFGK YG   Q     + ++S  RG VH+NCIN IV L +     + RFSTSGL
Sbjct: 301 SSQFSEAFGKFYGS--QSKSTTANDASESRGGVHDNCINSIVSLSKAGSPKVMRFSTSGL 360

Query: 361 DGKVAIWDLE 369
           DGKVAIWDLE
Sbjct: 361 DGKVAIWDLE 368

[Close]
BLAST of Cp4.1LG04g02460 vs. TAIR 10
Match: AT2G31300.1 (actin-related protein C1B )

HSP 1 Score: 605.9 bits (1561), Expect = 2.2e-173
Identity = 285/370 (77.03%), Postives = 325/370 (87.84%), Query Frame = 0 

Query: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSV-QDNWERIHVLQKHDQIISG 60
           M  + VH FA+ ITCHAWSPD SMVA CPNN EVHIYKS+ QD+WER+HVLQKHDQI+SG
Sbjct: 1   MAVVDVHRFAESITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSG 60

Query: 61  IDWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120
           IDWS KSN+IVT SHDRNSYVW+LEG+EWVPTLVILRLNRAALCVQWSPKENKFAVGSGA
Sbjct: 61  IDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120

Query: 121 KTVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVD 180
           KTVCICYYEQENNWWVSKL+RKRH+SSVT+VAWHPNN+LLATTSTDGKCR+FSTFIKGVD
Sbjct: 121 KTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIKGVD 180

Query: 181 TKDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPL 240
           TKDSKAG+ +++KFGE I+QLDLS+SWAFGVKWSPSG TLAY GH+SMIYFVD++GPSPL
Sbjct: 181 TKDSKAGSPAETKFGEQILQLDLSYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPSPL 240

Query: 241 AQNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKTASA-SKY 300
           AQ+VA RDLPLRD+LF+SE+MVIGVG+D NPMVFAAD+ GIWSFIR++GE+K AS+ S Y
Sbjct: 241 AQSVAFRDLPLRDVLFISEKMVIGVGYDSNPMVFAADDTGIWSFIRYIGEKKAASSGSSY 300

Query: 301 GSQFSEAFGKLYGQPRQGVDNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGL 360
            SQFSEAFGK YG   Q     + ++S  RG VH+N I  IVPL +     + RFSTSGL
Sbjct: 301 SSQFSEAFGKFYGS--QSKSTTANDASDSRGGVHDNSITSIVPLGKGGSPKVMRFSTSGL 360

Query: 361 DGKVAIWDLE 369
           DGK+AIWDLE
Sbjct: 361 DGKIAIWDLE 368

[Close]
BLAST of Cp4.1LG04g02460 vs. TAIR 10
Match: AT2G30910.2 (actin-related protein C1A )

HSP 1 Score: 585.5 bits (1508), Expect = 3.1e-167
Identity = 281/372 (75.54%), Postives = 319/372 (85.75%), Query Frame = 0 

Query: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSV-QDNWERIHVLQKHDQIISG 60
           M  + VH FA+ ITCHAWSPD SMVA CPNN EVHIYKS+ QD+WER+HVLQKHDQI+SG
Sbjct: 1   MAVVDVHRFAESITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSG 60

Query: 61  IDWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120
           IDWS KSN+IVT SHDRNSYVW+LEG+EWVPTLVILRLNRAALCVQWSPKENKFAVGSGA
Sbjct: 61  IDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120

Query: 121 KTVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVD 180
           KTVCICYYEQENNWWVSKL+RKRH+SSVT+VAWHPNN+LLATTSTDGKCR+FSTFIKGVD
Sbjct: 121 KTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIKGVD 180

Query: 181 TKDSK--AGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPS 240
           TK +    GAF   K  + I+QLDLS+SWAFGVKWSPSG TLAY GH+SMIYFVD++GPS
Sbjct: 181 TKYAHYLNGAFFLLK--QQILQLDLSYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPS 240

Query: 241 PLAQNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKTASA-S 300
           PLAQ+VA RDLPLRD+LF+SE+MVIGVG+D NPMVFA+D+ GIWSFIR++GE+K AS+ S
Sbjct: 241 PLAQSVAFRDLPLRDVLFISEKMVIGVGYDSNPMVFASDDTGIWSFIRYIGEKKAASSNS 300

Query: 301 KYGSQFSEAFGKLYGQPRQGVDNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTS 360
            Y SQFSEAFGK YG   Q     + ++S  RG VH+NCIN IV L +     + RFSTS
Sbjct: 301 SYSSQFSEAFGKFYGS--QSKSTTANDASESRGGVHDNCINSIVSLSKAGSPKVMRFSTS 360

Query: 361 GLDGKVAIWDLE 369
           GLDGKVAIWDLE
Sbjct: 361 GLDGKVAIWDLE 368

[Close]
BLAST of Cp4.1LG04g02460 vs. TAIR 10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 54.3 bits (129), Expect = 2.5e-07
Identity = 39/133 (29.32%), Postives = 65/133 (48.87%), Query Frame = 0 

Query: 45  ERIHVLQKHDQIISGIDWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCV 104
           E +     H+  IS + +S  +  IV+AS D+   +W++E    + TL+       A CV
Sbjct: 62  EPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLI--GHTNYAFCV 121

Query: 105 QWSPKENKFAVGSGAKTVCICYYEQENNWWVS--KLLR--KRHDSSVTNVAWHPNNLLLA 164
            ++P+ N    GS  +TV I        W V+  K L+    H   VT V ++ +  L+ 
Sbjct: 122 NFNPQSNMIVSGSFDETVRI--------WDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIV 181

Query: 165 TTSTDGKCRIFST 174
           ++S DG CRI+ +
Sbjct: 182 SSSYDGLCRIWDS 184

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g02460 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O808562.1e-17377.30Actin-related protein 2/3 complex subunit 1A OS=Arabidopsis thaliana OX=3702 GN=... [more]
Q9SJW63.1e-17277.03Actin-related protein 2/3 complex subunit 1B OS=Arabidopsis thaliana OX=3702 GN=... [more]
O966221.7e-9043.90Actin-related protein 2/3 complex subunit 1 OS=Dictyostelium discoideum OX=44689... [more]
Q7ZXD56.8e-7942.23Actin-related protein 2/3 complex subunit 1B-A OS=Xenopus laevis OX=8355 GN=arpc... [more]
Q9WV321.2e-7840.60Actin-related protein 2/3 complex subunit 1B OS=Mus musculus OX=10090 GN=Arpc1b ... [more]
BLAST of Cp4.1LG04g02460 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023531973.12.80e-285100.00actin-related protein 2/3 complex subunit 1A-like [Cucurbita pepo subsp. pepo][more]
XP_022930887.12.69e-28399.47actin-related protein 2/3 complex subunit 1A-like [Cucurbita moschata] >KAG65892... [more]
XP_022989257.13.14e-28298.94actin-related protein 2/3 complex subunit 1A-like [Cucurbita maxima][more]
XP_038886984.12.97e-27194.16actin-related protein 2/3 complex subunit 1A-like [Benincasa hispida][more]
XP_008449504.12.97e-27193.90PREDICTED: actin-related protein 2/3 complex subunit 1A-like [Cucumis melo][more]
BLAST of Cp4.1LG04g02460 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1ERW91.30e-28399.47Actin-related protein 2/3 complex subunit OS=Cucurbita moschata OX=3662 GN=LOC11... [more]
A0A6J1JFB51.52e-28298.94Actin-related protein 2/3 complex subunit OS=Cucurbita maxima OX=3661 GN=LOC1114... [more]
A0A1S3BM681.44e-27193.90Actin-related protein 2/3 complex subunit OS=Cucumis melo OX=3656 GN=LOC10349137... [more]
A0A6J1GLX81.61e-26893.37Actin-related protein 2/3 complex subunit OS=Cucurbita moschata OX=3662 GN=LOC11... [more]
A0A6J1D3Z77.64e-26792.57Actin-related protein 2/3 complex subunit OS=Momordica charantia OX=3673 GN=LOC1... [more]
BLAST of Cp4.1LG04g02460 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G30910.11.5e-17477.30actin-related protein C1A [more]
AT2G30910.31.5e-17477.30actin-related protein C1A [more]
AT2G31300.12.2e-17377.03actin-related protein C1B [more]
AT2G30910.23.1e-16775.54actin-related protein C1A [more]
AT3G49660.12.5e-0729.32Transducin/WD40 repeat-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 2..38
e-value: 410.0
score: 0.5
coord: 87..126
e-value: 7.9
score: 11.3
coord: 193..232
e-value: 5.2
score: 12.5
coord: 320..366
e-value: 190.0
score: 2.6
coord: 43..82
e-value: 1.1E-4
score: 31.5
coord: 132..172
e-value: 1.9E-5
score: 34.1
IPR001680WD40 repeatPFAMPF00400WD40coord: 45..82
e-value: 0.049
score: 14.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 50..91
score: 11.477578
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 140..172
score: 9.639578
IPR024977Anaphase-promoting complex subunit 4, WD40 domainPFAMPF12894ANAPC4_WD40coord: 104..172
e-value: 1.4E-5
score: 25.2
IPR017383Actin-related protein 2/3 complex subunit 1PIRSFPIRSF038093ARPC1coord: 1..371
e-value: 9.3E-146
score: 483.4
IPR017383Actin-related protein 2/3 complex subunit 1PANTHERPTHR10709ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1coord: 1..367
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 5..376
e-value: 2.7E-136
score: 456.1
NoneNo IPR availablePANTHERPTHR10709:SF2ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNITcoord: 1..367
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 50..84
score: 9.256512
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 69..83
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 11..373

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g02460.1Cp4.1LG04g02460.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0034314 Arp2/3 complex-mediated actin nucleation
biological_process GO:0030833 regulation of actin filament polymerization
cellular_component GO:0005885 Arp2/3 protein complex
cellular_component GO:0005737 cytoplasm
cellular_component GO:0015629 actin cytoskeleton
molecular_function GO:0051015 actin filament binding
molecular_function GO:0005515 protein binding