Cp4.1LG04g01580 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g01580
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	S-protein homolog
Location	Cp4.1LG04: 523257 .. 523754 (+)
RNA-Seq Expression	Cp4.1LG04g01580
Synteny	Cp4.1LG04g01580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATGCATCGGCCTATGTTATTGCTAGTGCTTGTGCTCATAGCCTCCTCTCACTTTTCGATGGTCACAACCTCCAGAAACAAAAATAAGGTCCCAAAACCCAAAAAAACAAAGCCCAAATTTCTAAAACCAAACAATCCTAATCCCGCCTTTGAGCGTTTTACTGTAGAGATCCATAACGACTTGCGCATGTTCATATTGGATGCCCACTGCTCCTCAAAAGATGATGATTTAGGGTTACATATATTGTTCCCAGATGAGGAACAAGATTGGTCATTTCATGATAATTGGTTAGGCACTACCGAATTTCATTGTAGATTGGAGTGGCAATATGGGCTTCTAGAATTTGATGCCTTTCATAGCAACACAGATAATCTTTTACTCGATTATTGCGCCAACGCAACATGCATTTGGAGTGCGAGACAAGATGGGATTTATTTGAACAATCAAGATGATGATCTTGTTTTTTATGAGTATTGGGATATGCTTGGATAG

mRNA sequence

ATGGCGATGCATCGGCCTATGTTATTGCTAGTGCTTGTGCTCATAGCCTCCTCTCACTTTTCGATGGTCACAACCTCCAGAAACAAAAATAAGGTCCCAAAACCCAAAAAAACAAAGCCCAAATTTCTAAAACCAAACAATCCTAATCCCGCCTTTGAGCGTTTTACTGTAGAGATCCATAACGACTTGCGCATGTTCATATTGGATGCCCACTGCTCCTCAAAAGATGATGATTTAGGGTTACATATATTGTTCCCAGATGAGGAACAAGATTGGTCATTTCATGATAATTGGTTAGGCACTACCGAATTTCATTGTAGATTGGAGTGGCAATATGGGCTTCTAGAATTTGATGCCTTTCATAGCAACACAGATAATCTTTTACTCGATTATTGCGCCAACGCAACATGCATTTGGAGTGCGAGACAAGATGGGATTTATTTGAACAATCAAGATGATGATCTTGTTTTTTATGAGTATTGGGATATGCTTGGATAG

Coding sequence (CDS)

ATGGCGATGCATCGGCCTATGTTATTGCTAGTGCTTGTGCTCATAGCCTCCTCTCACTTTTCGATGGTCACAACCTCCAGAAACAAAAATAAGGTCCCAAAACCCAAAAAAACAAAGCCCAAATTTCTAAAACCAAACAATCCTAATCCCGCCTTTGAGCGTTTTACTGTAGAGATCCATAACGACTTGCGCATGTTCATATTGGATGCCCACTGCTCCTCAAAAGATGATGATTTAGGGTTACATATATTGTTCCCAGATGAGGAACAAGATTGGTCATTTCATGATAATTGGTTAGGCACTACCGAATTTCATTGTAGATTGGAGTGGCAATATGGGCTTCTAGAATTTGATGCCTTTCATAGCAACACAGATAATCTTTTACTCGATTATTGCGCCAACGCAACATGCATTTGGAGTGCGAGACAAGATGGGATTTATTTGAACAATCAAGATGATGATCTTGTTTTTTATGAGTATTGGGATATGCTTGGATAG

Protein sequence

MAMHRPMLLLVLVLIASSHFSMVTTSRNKNKVPKPKKTKPKFLKPNNPNPAFERFTVEIHNDLRMFILDAHCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTEFHCRLEWQYGLLEFDAFHSNTDNLLLDYCANATCIWSARQDGIYLNNQDDDLVFYEYWDMLG

Homology

[Close]

BLAST of Cp4.1LG04g01580 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.7e-10
Identity = 44/140 (31.43%), Postives = 67/140 (47.86%), Query Frame = 0


Query: 9   LLVLVLIASSHFSMVTTSRNKNKVPKPKKTKPKFLKPNNPNPAF--ERFTVEIHNDL-RM 68
           L +L++  ++  S    + +KN +P P         P++ N  F   + TVEI+NDL   
Sbjct: 10  LFILIIFITTKLSQ---ADHKNDIPVPN-------DPSSTNSVFPTSKRTVEINNDLGNQ 69

Query: 69  FILDAHCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTEFHCRLEWQYGLLEFDAFHSNTD 128
             L  HC SKDDDLG   L P E   +SF   + G T + C   W      FD +  + D
Sbjct: 70  LTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNESHSFDIYKDHRD 129

Query: 129 NLLLDYCANATCIWSARQDG 146
           +   + C +  C+W  R++G
Sbjct: 130 SGGDNKCESDRCVWKIRRNG 139

[Close]

BLAST of Cp4.1LG04g01580 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-09
Identity = 38/100 (38.00%), Postives = 53/100 (53.00%), Query Frame = 0


Query: 54  RFTVEIHNDLRMFILDAHCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTEFHCRL-EWQY 113
           R T++  ND   ++L  HC S+DDDLG HIL   E   W FH N+  +T + C   + Q 
Sbjct: 47  RVTIQNDND---YLLGIHCKSRDDDLGFHILAKGELFGWKFHVNFCYSTLYFCGFSQGQM 106

Query: 114 GLLEFDAFHSNTDNLLLDYCANATCIWSARQDGIYLNNQD 153
               F+ + +N D      CAN  C W A +DGIY  ++D
Sbjct: 107 KKGVFEIYRANRD---FYRCAN--CTWKAEKDGIYGYSED 138

[Close]

BLAST of Cp4.1LG04g01580 vs. ExPASy Swiss-Prot
Match: Q9FI84 (S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.4e-07
Identity = 36/110 (32.73%), Postives = 53/110 (48.18%), Query Frame = 0


Query: 54  RFTVEIHNDLRMFILDAHCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTEFHCRL-EWQY 113
           R TV+ +ND   ++L  HC SKDDDLG HI    E   W FH N+  +T + C   + Q 
Sbjct: 48  RITVKNNND---YLLGIHCKSKDDDLGFHIHKEGELYGWKFHVNFQNSTLYFCGFSQGQD 107

Query: 114 GLLEFDAFHSNTDNLLLDYCANATCIWSARQDGIY-LNNQDDDLVFYEYW 162
               FD      D    D+     C W+A++D +Y  +N    + ++  W
Sbjct: 108 NKGVFD-----IDRAERDFYRCRNCTWNAKKDSLYGYSNLPQTVTWFFKW 149

[Close]

BLAST of Cp4.1LG04g01580 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.3e-07
Identity = 32/94 (34.04%), Postives = 47/94 (50.00%), Query Frame = 0


Query: 71  HCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTEFHCRLEWQYGLLEFDAFHSNTDNLLLD 130
           HC SK+DDLG   L       W+F +N L +T F C +    G +  + F    D +L  
Sbjct: 58  HCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNKDNGHMNVNVFWD--DVILFH 117

Query: 131 YCANATCIWSARQDGIYL-NNQDDDLVFYEYWDM 164
            C    CIW+A+ DG+YL N+   + V    W++
Sbjct: 118 RCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWEV 149

[Close]

BLAST of Cp4.1LG04g01580 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.1e-07
Identity = 33/97 (34.02%), Postives = 46/97 (47.42%), Query Frame = 0


Query: 49  NPAFERFTVEIHNDLR-MFILDAHCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTEFHCR 108
           NP F +  V + N++     L   C SKDDDLG H+L   +   W F  +W  TT F C+
Sbjct: 26  NP-FAKTVVTVTNNISPQTTLTISCRSKDDDLGEHLLLHGQAFLWKFRPSWFRTTLFTCK 85

Query: 109 LEWQYGLLEFDAFHSNTDNLLLDYCANATCIWSARQD 145
             W   +  FD + S+ D     +C   +C WS   D
Sbjct: 86  FLWNNNVKWFDTYRSDRDQ---GHC--YSCNWSINAD 116

[Close]

BLAST of Cp4.1LG04g01580 vs. NCBI nr
Match: XP_022933678.1 (S-protein homolog 2-like [Cucurbita moschata])

HSP 1 Score: 337 bits (863), Expect = 1.30e-116
Identity = 158/165 (95.76%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 1   MAMHRPMLLLVLVLIASSHFSMVTTSRNKNKVPKPKKTKPKFLKPNNPNPAFERFTVEIH 60
           MAM RPMLLLVLVLIA SHFSM+TTS+N NKVPKPKKTKPKFLKPNNPNPAFERFTVEIH
Sbjct: 1   MAMRRPMLLLVLVLIAFSHFSMLTTSKNNNKVPKPKKTKPKFLKPNNPNPAFERFTVEIH 60

Query: 61  NDLRMFILDAHCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTEFHCRLEWQYGLLEFDAF 120
           NDLRMFILDAHCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTEFHCRLEWQYGLLEFDAF
Sbjct: 61  NDLRMFILDAHCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTEFHCRLEWQYGLLEFDAF 120

Query: 121 HSNTDNLLLDYCANATCIWSARQDGIYLNNQDDDLVFYEYWDMLG 165
           HSNTDNLL+DYCANATCIWSARQDG+YLNNQDDDLVFYEYWDMLG
Sbjct: 121 HSNTDNLLIDYCANATCIWSARQDGVYLNNQDDDLVFYEYWDMLG 165

[Close]

BLAST of Cp4.1LG04g01580 vs. NCBI nr
Match: KAE8648167.1 (hypothetical protein Csa_018435 [Cucumis sativus])

HSP 1 Score: 200 bits (509), Expect = 8.65e-63
Identity = 101/160 (63.12%), Postives = 116/160 (72.50%), Query Frame = 0


Query: 5   RPMLLLVLVLIASSHFSMVTTSRNKNKVPKPKKTKPKFLKPNNPNPAFERFTVEIHNDLR 64
           R  LLLV++L+A    SM    + KNK P PK        PNNP   FERFTVEIHNDLR
Sbjct: 4   RLTLLLVILLLAPLRTSMAK-KKAKNKSPTPK-----LSVPNNPVVMFERFTVEIHNDLR 63

Query: 65  MFILDAHCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTEFHCRLEWQYGLLEFDAFHSNT 124
           MFILD+HC SKDDDLGLHILFPDE+QDWSF  NW+ TT FHCRLEW+ G LEFD+F S  
Sbjct: 64  MFILDSHCYSKDDDLGLHILFPDEKQDWSFKGNWIATTSFHCRLEWEVGYLEFDSFKSAP 123

Query: 125 DNLLLDYCANATCIWSARQDGIYLNNQDDDLVFYEYWDML 164
           D  + +YC N TCIWSARQDG+YLNN   + VFY YW+M+
Sbjct: 124 D-FVTNYCGNQTCIWSARQDGVYLNNAAGEQVFYNYWEMI 156

[Close]

BLAST of Cp4.1LG04g01580 vs. NCBI nr
Match: XP_023546843.1 (S-protein homolog 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 166 bits (419), Expect = 4.98e-49
Identity = 76/159 (47.80%), Postives = 111/159 (69.81%), Query Frame = 0


Query: 6   PMLLLVLVLIASSHFSMVTTSRNKNKVPKPKKTKPKFLKPNNPNPAFERFTVEIHNDLRM 65
           P+LLL+L+L+     +M   S+ K +      T P+   PN P  A  +F V I N LRM
Sbjct: 11  PLLLLLLLLLHLVSLTMSVASKKKAE------TGPEQPDPNQPAIALRKFDVHIRNGLRM 70

Query: 66  FILDAHCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTEFHCRLEWQYGLLEFDAFHSNTD 125
           ++LD+HC SKDDDLG+H+++PD+EQ WSF  NWLG+T FHC+LEW YG +EFDAF  +  
Sbjct: 71  YLLDSHCCSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDL- 130

Query: 126 NLLLDYCANATCIWSARQDGIYLNNQDDDLVFYEYWDML 164
           N +  +C +++C+W+A+QDG+YL +Q+  LVF ++W+ML
Sbjct: 131 NFVTTFCGDSSCVWTAKQDGVYLADQNGQLVFKDHWEML 162

[Close]

BLAST of Cp4.1LG04g01580 vs. NCBI nr
Match: XP_008453055.1 (PREDICTED: uncharacterized protein LOC103493877 [Cucumis melo])

HSP 1 Score: 162 bits (410), Expect = 5.63e-48
Identity = 70/131 (53.44%), Postives = 98/131 (74.81%), Query Frame = 0


Query: 34  KPKKTKPKFLKPNNPNPAFERFTVEIHNDLRMFILDAHCSSKDDDLGLHILFPDEEQDWS 93
           K ++T P+  KP+ P   F +F + I+N+L+M++LD+HC SKDDDLG  +L+P++EQ WS
Sbjct: 9   KSQETGPELPKPHEPLVTFHKFNIRIYNELQMYLLDSHCYSKDDDLGTKVLYPNDEQSWS 68

Query: 94  FHDNWLGTTEFHCRLEWQYGLLEFDAFHSNTDNLLLDYCANATCIWSARQDGIYLNNQDD 153
           F  NWLGTT FHC+LEW+ G LEFDAF SN    L ++CA ++C WSARQDG+YL NQ+ 
Sbjct: 69  FRGNWLGTTNFHCKLEWENGYLEFDAF-SNDVKFLTNFCAKSSCCWSARQDGVYLTNQNG 128

Query: 154 DLVFYEYWDML 164
            +VF + W+M+
Sbjct: 129 QVVFNQNWEMI 138

[Close]

BLAST of Cp4.1LG04g01580 vs. NCBI nr
Match: KAG6600848.1 (S-protein-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 158 bits (399), Expect = 5.07e-46
Identity = 74/159 (46.54%), Postives = 109/159 (68.55%), Query Frame = 0


Query: 6   PMLLLVLVLIASSHFSMVTTSRNKNKVPKPKKTKPKFLKPNNPNPAFERFTVEIHNDLRM 65
           P+LLL+L  + S   +M   S+ K +      T P+   PN P  A  +F V I N LRM
Sbjct: 11  PLLLLLLFHLVS--LTMSVASKKKAE------TGPEQPDPNQPAIALRKFDVHIRNGLRM 70

Query: 66  FILDAHCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTEFHCRLEWQYGLLEFDAFHSNTD 125
           ++LD+HC SKDDDLG+ +++PD+EQ WSF  NWLG+T FHC+LEW YG +EFDAF  +  
Sbjct: 71  YLLDSHCCSKDDDLGVRVIYPDDEQRWSFRGNWLGSTNFHCKLEWAYGFVEFDAFDDDL- 130

Query: 126 NLLLDYCANATCIWSARQDGIYLNNQDDDLVFYEYWDML 164
           N +  +C N++C+W+A+QDG+YL +Q+  LVF ++W+++
Sbjct: 131 NFVTSFCGNSSCVWTAKQDGLYLADQNGQLVFKDHWELV 160

[Close]

BLAST of Cp4.1LG04g01580 vs. ExPASy TrEMBL
Match: A0A6J1F5H5 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111441018 PE=3 SV=1)

HSP 1 Score: 337 bits (863), Expect = 6.30e-117
Identity = 158/165 (95.76%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 1   MAMHRPMLLLVLVLIASSHFSMVTTSRNKNKVPKPKKTKPKFLKPNNPNPAFERFTVEIH 60
           MAM RPMLLLVLVLIA SHFSM+TTS+N NKVPKPKKTKPKFLKPNNPNPAFERFTVEIH
Sbjct: 1   MAMRRPMLLLVLVLIAFSHFSMLTTSKNNNKVPKPKKTKPKFLKPNNPNPAFERFTVEIH 60

Query: 61  NDLRMFILDAHCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTEFHCRLEWQYGLLEFDAF 120
           NDLRMFILDAHCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTEFHCRLEWQYGLLEFDAF
Sbjct: 61  NDLRMFILDAHCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTEFHCRLEWQYGLLEFDAF 120

Query: 121 HSNTDNLLLDYCANATCIWSARQDGIYLNNQDDDLVFYEYWDMLG 165
           HSNTDNLL+DYCANATCIWSARQDG+YLNNQDDDLVFYEYWDMLG
Sbjct: 121 HSNTDNLLIDYCANATCIWSARQDGVYLNNQDDDLVFYEYWDMLG 165

[Close]

BLAST of Cp4.1LG04g01580 vs. ExPASy TrEMBL
Match: A0A0A0KL79 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G016040 PE=3 SV=1)

HSP 1 Score: 195 bits (495), Expect = 2.95e-61
Identity = 90/131 (68.70%), Postives = 101/131 (77.10%), Query Frame = 0


Query: 34  KPKKTKPKFLKPNNPNPAFERFTVEIHNDLRMFILDAHCSSKDDDLGLHILFPDEEQDWS 93
           K K   PK   PNNP   FERFTVEIHNDLRMFILD+HC SKDDDLGLHILFPDE+QDWS
Sbjct: 7   KNKSPTPKLSVPNNPVVMFERFTVEIHNDLRMFILDSHCYSKDDDLGLHILFPDEKQDWS 66

Query: 94  FHDNWLGTTEFHCRLEWQYGLLEFDAFHSNTDNLLLDYCANATCIWSARQDGIYLNNQDD 153
           F  NW+ TT FHCRLEW+ G LEFD+F S  D  + +YC N TCIWSARQDG+YLNN   
Sbjct: 67  FKGNWIATTSFHCRLEWEVGYLEFDSFKSAPD-FVTNYCGNQTCIWSARQDGVYLNNAAG 126

Query: 154 DLVFYEYWDML 164
           + VFY YW+M+
Sbjct: 127 EQVFYNYWEMI 136

[Close]

BLAST of Cp4.1LG04g01580 vs. ExPASy TrEMBL
Match: A0A1S3BUQ9 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103493877 PE=3 SV=1)

HSP 1 Score: 162 bits (410), Expect = 2.73e-48
Identity = 70/131 (53.44%), Postives = 98/131 (74.81%), Query Frame = 0


Query: 34  KPKKTKPKFLKPNNPNPAFERFTVEIHNDLRMFILDAHCSSKDDDLGLHILFPDEEQDWS 93
           K ++T P+  KP+ P   F +F + I+N+L+M++LD+HC SKDDDLG  +L+P++EQ WS
Sbjct: 9   KSQETGPELPKPHEPLVTFHKFNIRIYNELQMYLLDSHCYSKDDDLGTKVLYPNDEQSWS 68

Query: 94  FHDNWLGTTEFHCRLEWQYGLLEFDAFHSNTDNLLLDYCANATCIWSARQDGIYLNNQDD 153
           F  NWLGTT FHC+LEW+ G LEFDAF SN    L ++CA ++C WSARQDG+YL NQ+ 
Sbjct: 69  FRGNWLGTTNFHCKLEWENGYLEFDAF-SNDVKFLTNFCAKSSCCWSARQDGVYLTNQNG 128

Query: 154 DLVFYEYWDML 164
            +VF + W+M+
Sbjct: 129 QVVFNQNWEMI 138

[Close]

BLAST of Cp4.1LG04g01580 vs. ExPASy TrEMBL
Match: A0A6J1FMU2 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111447244 PE=3 SV=1)

HSP 1 Score: 156 bits (395), Expect = 9.92e-46
Identity = 72/160 (45.00%), Postives = 109/160 (68.12%), Query Frame = 0


Query: 5   RPMLLLVLVLIASSHFSMVTTSRNKNKVPKPKKTKPKFLKPNNPNPAFERFTVEIHNDLR 64
           R + LL+L+L+     +M   S+ K +      T P+   PN P  A  +F V I N LR
Sbjct: 8   RRLPLLLLLLLHPVSLTMSVASKKKAE------TGPEQPDPNQPAIALRKFDVHIRNGLR 67

Query: 65  MFILDAHCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTEFHCRLEWQYGLLEFDAFHSNT 124
           M++LD+HC SKDDDLG+ +++PD+EQ WSF  NWLG+T FHC+LEW YG +EFDAF  + 
Sbjct: 68  MYLLDSHCCSKDDDLGVRVIYPDDEQRWSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDL 127

Query: 125 DNLLLDYCANATCIWSARQDGIYLNNQDDDLVFYEYWDML 164
            N +  +C +++C+W+A+QDG+YL +Q+  LVF ++W+++
Sbjct: 128 -NFVTSFCGDSSCVWTAKQDGLYLADQNGQLVFKDHWELV 160

[Close]

BLAST of Cp4.1LG04g01580 vs. ExPASy TrEMBL
Match: A0A0A0KSN2 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G538550 PE=3 SV=1)

HSP 1 Score: 153 bits (387), Expect = 1.16e-44
Identity = 69/110 (62.73%), Postives = 84/110 (76.36%), Query Frame = 0


Query: 55  FTVEIHNDLRMFILDAHCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTEFHCRLEWQYGL 114
           + +EIHNDL M++LD+HC SKD+DLGLHILFP E QDWSF DN   TT+F C LEW+ GL
Sbjct: 40  YQIEIHNDLEMYLLDSHCFSKDNDLGLHILFPGELQDWSFQDNDFETTKFRCILEWENGL 99

Query: 115 LEFDAFHSNTDNLLLDYCANATCIWSARQDGIYLNNQDDDLVFYEYWDML 164
           LEFD+F +N  N L ++C N TC WSARQDG+YL N   + VF +YWDML
Sbjct: 100 LEFDSFKTN-HNFLNNFCGNLTCSWSARQDGVYLTNVKGEYVFQDYWDML 148

[Close]

BLAST of Cp4.1LG04g01580 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 67.4 bits (163), Expect = 1.2e-11
Identity = 44/140 (31.43%), Postives = 67/140 (47.86%), Query Frame = 0


Query: 9   LLVLVLIASSHFSMVTTSRNKNKVPKPKKTKPKFLKPNNPNPAF--ERFTVEIHNDL-RM 68
           L +L++  ++  S    + +KN +P P         P++ N  F   + TVEI+NDL   
Sbjct: 10  LFILIIFITTKLSQ---ADHKNDIPVPN-------DPSSTNSVFPTSKRTVEINNDLGNQ 69

Query: 69  FILDAHCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTEFHCRLEWQYGLLEFDAFHSNTD 128
             L  HC SKDDDLG   L P E   +SF   + G T + C   W      FD +  + D
Sbjct: 70  LTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNESHSFDIYKDHRD 129

Query: 129 NLLLDYCANATCIWSARQDG 146
           +   + C +  C+W  R++G
Sbjct: 130 SGGDNKCESDRCVWKIRRNG 139

[Close]

BLAST of Cp4.1LG04g01580 vs. TAIR 10
Match: AT2G06090.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 63.2 bits (152), Expect = 2.3e-10
Identity = 34/95 (35.79%), Postives = 43/95 (45.26%), Query Frame = 0


Query: 67  ILDAHCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTEFHCRLEWQYGLLEFDAFHSNTDN 126
           +L  HC SKDDDLG+H +    E ++ F D+  G TEF C L    G      F +    
Sbjct: 41  VLTVHCKSKDDDLGIHTVARSYEYNFKFEDSVFGRTEFFCTLMHGVGSKYSVTFTAYKAK 100

Query: 127 LLLDYCANATCIWSARQDGIYLNNQDDDLVFYEYW 162
                      IW A  DGIYL ++D D V    W
Sbjct: 101 PAFVASTGVIKIWDALDDGIYLTDEDHDFVKIYGW 135

[Close]

BLAST of Cp4.1LG04g01580 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 60.1 bits (144), Expect = 2.0e-09
Identity = 32/86 (37.21%), Postives = 48/86 (55.81%), Query Frame = 0


Query: 67  ILDAHCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTEFHCRLEWQYGL---LEFDAFHSN 126
           +L  HC SKDDDLG HIL   ++ +++F DN   TT F C+++        L+F A+ ++
Sbjct: 40  LLKVHCRSKDDDLGEHILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNFKHHLDFVAYETS 99

Query: 127 TDNLLLDYCANATCIWSARQDGIYLN 150
               L      A+C W  R+DGIY +
Sbjct: 100 WSKAL-----EASCKWIGREDGIYFS 120

[Close]

BLAST of Cp4.1LG04g01580 vs. TAIR 10
Match: AT5G06020.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 57.8 bits (138), Expect = 9.8e-09
Identity = 36/110 (32.73%), Postives = 53/110 (48.18%), Query Frame = 0


Query: 54  RFTVEIHNDLRMFILDAHCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTEFHCRL-EWQY 113
           R TV+ +ND   ++L  HC SKDDDLG HI    E   W FH N+  +T + C   + Q 
Sbjct: 48  RITVKNNND---YLLGIHCKSKDDDLGFHIHKEGELYGWKFHVNFQNSTLYFCGFSQGQD 107

Query: 114 GLLEFDAFHSNTDNLLLDYCANATCIWSARQDGIY-LNNQDDDLVFYEYW 162
               FD      D    D+     C W+A++D +Y  +N    + ++  W
Sbjct: 108 NKGVFD-----IDRAERDFYRCRNCTWNAKKDSLYGYSNLPQTVTWFFKW 149

[Close]

BLAST of Cp4.1LG04g01580 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 57.0 bits (136), Expect = 1.7e-08
Identity = 32/94 (34.04%), Postives = 47/94 (50.00%), Query Frame = 0


Query: 71  HCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTEFHCRLEWQYGLLEFDAFHSNTDNLLLD 130
           HC SK+DDLG   L       W+F +N L +T F C +    G +  + F    D +L  
Sbjct: 58  HCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNKDNGHMNVNVFWD--DVILFH 117

Query: 131 YCANATCIWSARQDGIYL-NNQDDDLVFYEYWDM 164
            C    CIW+A+ DG+YL N+   + V    W++
Sbjct: 118 RCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWEV 149

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g01580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLQ5	1.7e-10	31.43	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
P0DN92	1.1e-09	38.00	S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1	[more]
Q9FI84	1.4e-07	32.73	S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1	[more]
F4JLS0	2.3e-07	34.04	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
P0DN93	3.1e-07	34.02	S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1	[more]

BLAST of Cp4.1LG04g01580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933678.1	1.30e-116	95.76	S-protein homolog 2-like [Cucurbita moschata]	[more]
KAE8648167.1	8.65e-63	63.13	hypothetical protein Csa_018435 [Cucumis sativus]	[more]
XP_023546843.1	4.98e-49	47.80	S-protein homolog 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_008453055.1	5.63e-48	53.44	PREDICTED: uncharacterized protein LOC103493877 [Cucumis melo]	[more]
KAG6600848.1	5.07e-46	46.54	S-protein-like 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cp4.1LG04g01580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F5H5	6.30e-117	95.76	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111441018 PE=3 SV=1	[more]
A0A0A0KL79	2.95e-61	68.70	S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G016040 PE=3 SV=1	[more]
A0A1S3BUQ9	2.73e-48	53.44	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103493877 PE=3 SV=1	[more]
A0A6J1FMU2	9.92e-46	45.00	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111447244 PE=3 SV=1	[more]
A0A0A0KSN2	1.16e-44	62.73	S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G538550 PE=3 SV=1	[more]

BLAST of Cp4.1LG04g01580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16195.1	1.2e-11	31.43	Plant self-incompatibility protein S1 family	[more]
AT2G06090.1	2.3e-10	35.79	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	2.0e-09	37.21	Plant self-incompatibility protein S1 family	[more]
AT5G06020.1	9.8e-09	32.73	Plant self-incompatibility protein S1 family	[more]
AT4G16295.1	1.7e-08	34.04	S-protein homologue 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 56..157 e-value: 1.1E-23 score: 83.7
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 39..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..49
None	No IPR available	PANTHER	PTHR31232:SF47	SUBFAMILY NOT NAMED	coord: 39..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g01580.1	Cp4.1LG04g01580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region