Cp4.1LG03g18030 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG03g18030
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RING-type domain-containing protein
Location	Cp4.1LG03: 12355791 .. 12359431 (+)
RNA-Seq Expression	Cp4.1LG03g18030
Synteny	Cp4.1LG03g18030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGCAACGAAGATGGCAAATAAAGAATAATTTCGAGGAAAGGAGGATCGGTAAGGATGTAAAGTTTTTCAAAGAAAACACCTCTACATATATGGAATGGAAGCCAAGATTGCTTTTATATCGATTGCCGCTCCCTCTTTCCCTTCCCCTTTCTCCCTTTCCTTTCCCCATTTCTTCATCTTCCGCTTCCTCTCGCCAAGTTTCTTGGGTTTCCTCTTTCGATCGGCCTGCTCCAGCCGCAGTCCGCCGTTCCCTTCTCCTCCAGGTACCATCTCCGTTACTATTTTGTTCATACTACTGTTATATTGCTCCAATCATGTTTGTTTTCTCTGATTTGTTGCCTATCTTTTTGTTTCTTGTTTGTTTCTGGTTTTTCTGCTAGGTTTTAATGTGTTTGTGCTTCGTTCTGTGTTTTCGATTCTTGCCTTTTTCCGTTATTCGGCCTAGTTCCGAACTCTTGAACAAAGTCTGTTTAAGGTTTTAGCACGTCTGTTTCAGATTCGAGAAGATGATGCTTTGAATTGCTTGTACTGACGGTTCGATTTCTCTAGGGTTTTAAATGTGTTTTTTGGGGTCTGGTTAGGGCTTAAATCTCAACAATATATTAGCTAAATTAGGGGTTTTATTATTTTTTTTTTAATTTTTTTTTTTGATGTTCATTTGGGGTTTTATTGTCATTTTTATTTTATTTTTAGTTCATTTGGGCCTTTATTTTTAAATCACAGTTTCAAGGGCCATGATTGGAGAAAACAATCCTTGATATAAATGGTCGATTTAGACGGTTTATACAAGTATAAATAGTTTATATAAGATTAAGTTTGAATAATAGAAATTCGAAAAACGGAATCGTCGGTTTCATATTTTAAACTTCGTCACGGTTCTCCGAACTTTGTATAAATTAAACAGATTTTCATTTATAACCACTAAACAGGTTAATTTTGATACGCACTGTCGTTAAAAAAATTAAACAGATTTTCAATTGTGCATCCTATCAATATTCCATTTCACTGGCCTTTTGGTCCTCTAGATTTTGTTCTTGATCAATGATGCGAAAAGGAAGAGAGGTCTGTGTTTCTTGTTTCGTTTTTTTATAACATTTAACTCATTTGTTCAATTCAATGTAGACTTCTAGTGAATTACATTACGGATGATTCAACCTCGTAGTTATTTAGATCTGAATTACTTCTTCATTTCTGTGGATGATTCTACTTTTTCAGGTCTGAAATACACAAAGGGCTGTCGGAATGAGCATTCGAAGTACAAATGATCTACATGAACAGAGAGCAAGAGTTGTTGAGAGAAGAACAAGATTGGACATTGACTTAAATTGTCCACCCCCAGATGAGTGCATTGATCCAACTGGCCCTCATGACGAAGCGGCACAGTACTATAATCGTCACCAAGAACAAGCTACGGACGCGGTTGATGAGGACATTGCTATAATCTCCCCGCGGAAATTTGCTGAAGTATGCAGTATTTTCGGTAAATTATTATGATTATTTGTCTAACTAGGCCACATGAGGAATTTAAGATGGTTCAAATTTTTTTAGGCCAGGAAGAATTTTCGAAGAAACCACTTTGAGAGTAGCTACGGTGTAGTCGTCAGACGTAATGGCAGCACAGAAGTTTATAGTGCTCTCACAGGTTTGTTTCCTTTTCTTTCCAATTCTTAAACTTCTTGATATATATTTCAATAGTTGGTTATTTCTCTCAGATAGTATGGCTACATTACCATTTCCCGGTATTTTATAAGGTACACTCAAGATGTTCTTTTAGAATGTTCAATATATTCACATTCTTGGATTTTTCTTATGTACTTTGAATCTTCTATATCTGGATCCACAAGACTGGTTGAATAAAAATCAGTATAATGCATATTTGAATTATATTTCGTTAGGTAAGAGAAAATCTTATGAAATCAAATCTCTAGTTCTTAACATGCATGCTGTTGTTTAAAGTTTTTATGAGCTTTGTATTTACATAACAATCTTGGGTTTTTGATTTTTATTTCTACTAGTAATCATATGTTCAAAACTTGCTCCTCTTTTCATTGCCAACCAGTTTGTCCAACTTCATTTGCATCCAATTACCTAATTTAACGAACACATTCCTGCCCGAACTTTGAAAATTATTTTGATTGCAGTTAACCGTGAAATTACCATTCTTTTGATTGAAGGCATTTTTTGTAGTTTGCCTCCTTTTTTGTGTCCCTTTATATTCTTTCTTTCATTTATCTCAATGAAACCTGGTTATATTCATAAGGGGAAAAAACAGTGAAATGAATTAACACATTTATTATCATTTATTACTCTGTTGCCAATCTGCTTATGTAACCTGTTTTCAACTATTTTGCAGATGTATCAAGTTGGCCCCCCTTTACAATTTGGTCGCCCCGTACGATTAGGAATAGTGTATCCATACAGGAACAACAAACAACTCACAACTTGGACCTCCGCTTAAGCTGTGAAACCAGTAGTAGGGCCACTAAGGTAATACTAATTTAGTGGTTATTTTCACCTGCAAAAACTTGGAGTTGCCTGTTCATCTGTGTATATATTGAAACTGAATATAATGTGTTCTGAAAAATTCAGGCTTCATTCGATGAAAGTTGCATTATTGATTTCTGTTATTAAATAATGTGGCTGTTTACTGAAGATTTATTTGTTCCTTTCTTCTACACAGAAGTATAACCCAAATGGGAAAAAAAGGAAAAAGAACTTTTCTAAAATCTCTAGGAAAACCTTGATTCAAGTTTTGATCCATAAAGTTCAAATCCTTCGGTTAATCCCTTGTGAATTTGGAATATCTTTTAGATGCTTTTCTTCCGTGCAAACATCTCAAACCAATCTGTTAAAAATTTGCTTCATCTTGTGCAAGTTTCTGTGAGGGCCATAGATTGCCATTGATTCAAGTTTCAGTTGGCACAAAACTTGGGCAATGATTTGAGCGAAGTCTTAACCAACTTCAAAACCACAAAATATTTGAGGTTCAATGCGTAATGATGCCAATATCTGAAGTAGATCTATGATGTTAATCACTGATTAACATCATTTTCCCATCCTTGTTTAGTAGAACTTGAAATTGAACTGTTATCTCCTTATTGCAGGTAAAAACTGACATTGTTATTCCTTCTGCACCTGCACTAAATAGTAGCAACACACCTGCAGATCGGAAGTTGCGGTGTGCGATCTGCATAGAACCATTGGTCGAAGAAACGACGACAAAATGCGGGCACATTTTCTGCAGGAATTGCATTGAAATAGCCATTGCTACTCAACACAAATGTCCCATATGTCGGCGTAAGCTTAGAAAACGAGATATTATTCGGATTTACCTTCCTTTTTCGAGTTAAAAAGAACAAAAAAAAAATATGAACACAACACAAGAATATTGCTTCTGTGTATTATGTATTCTTTTTCTGATGACGACAACGACATAGACGACTAGATTTGTACTTGCACACAGTTGCATTAACAAATATAGATTTCTTGATTTCTTCTTTCTGTATGGAATGAAACTAAAAACAAAAAGAACTAAAATCTCTTTGATGAGGTGTACTCTCTACTTGTATTTGAGTTCAAATAGTTCATTGATTAGAAAGGGGTGAATGAATGATTTGGCCCTCTTCTTTGCCTTATAAT

mRNA sequence

AGAGCAACGAAGATGGCAAATAAAGAATAATTTCGAGGAAAGGAGGATCGGTAAGGATGTAAAGTTTTTCAAAGAAAACACCTCTACATATATGGAATGGAAGCCAAGATTGCTTTTATATCGATTGCCGCTCCCTCTTTCCCTTCCCCTTTCTCCCTTTCCTTTCCCCATTTCTTCATCTTCCGCTTCCTCTCGCCAAGTTTCTTGGGTTTCCTCTTTCGATCGGCCTGCTCCAGCCGCAGTCCGCCGTTCCCTTCTCCTCCAGGTCTGAAATACACAAAGGGCTGTCGGAATGAGCATTCGAAGTACAAATGATCTACATGAACAGAGAGCAAGAGTTGTTGAGAGAAGAACAAGATTGGACATTGACTTAAATTGTCCACCCCCAGATGAGTGCATTGATCCAACTGGCCCTCATGACGAAGCGGCACAGTACTATAATCGTCACCAAGAACAAGCTACGGACGCGGTTGATGAGGACATTGCTATAATCTCCCCGCGGAAATTTGCTGAAGCCAGGAAGAATTTTCGAAGAAACCACTTTGAGAGTAGCTACGGTGTAGTCGTCAGACGTAATGGCAGCACAGAAGTTTATAGTGCTCTCACAGATGTATCAAGTTGGCCCCCCTTTACAATTTGGTCGCCCCGTACGATTAGGAATAGTGTATCCATACAGGAACAACAAACAACTCACAACTTGGACCTCCGCTTAAGCTGTGAAACCAGTAGTAGGGCCACTAAGGTAAAAACTGACATTGTTATTCCTTCTGCACCTGCACTAAATAGTAGCAACACACCTGCAGATCGGAAGTTGCGGTGTGCGATCTGCATAGAACCATTGGTCGAAGAAACGACGACAAAATGCGGGCACATTTTCTGCAGGAATTGCATTGAAATAGCCATTGCTACTCAACACAAATGTCCCATATGTCGGCGTAAGCTTAGAAAACGAGATATTATTCGGATTTACCTTCCTTTTTCGAGTTAAAAAGAACAAAAAAAAAATATGAACACAACACAAGAATATTGCTTCTGTGTATTATGTATTCTTTTTCTGATGACGACAACGACATAGACGACTAGATTTGTACTTGCACACAGTTGCATTAACAAATATAGATTTCTTGATTTCTTCTTTCTGTATGGAATGAAACTAAAAACAAAAAGAACTAAAATCTCTTTGATGAGGTGTACTCTCTACTTGTATTTGAGTTCAAATAGTTCATTGATTAGAAAGGGGTGAATGAATGATTTGGCCCTCTTCTTTGCCTTATAAT

Coding sequence (CDS)

ATGAGCATTCGAAGTACAAATGATCTACATGAACAGAGAGCAAGAGTTGTTGAGAGAAGAACAAGATTGGACATTGACTTAAATTGTCCACCCCCAGATGAGTGCATTGATCCAACTGGCCCTCATGACGAAGCGGCACAGTACTATAATCGTCACCAAGAACAAGCTACGGACGCGGTTGATGAGGACATTGCTATAATCTCCCCGCGGAAATTTGCTGAAGCCAGGAAGAATTTTCGAAGAAACCACTTTGAGAGTAGCTACGGTGTAGTCGTCAGACGTAATGGCAGCACAGAAGTTTATAGTGCTCTCACAGATGTATCAAGTTGGCCCCCCTTTACAATTTGGTCGCCCCGTACGATTAGGAATAGTGTATCCATACAGGAACAACAAACAACTCACAACTTGGACCTCCGCTTAAGCTGTGAAACCAGTAGTAGGGCCACTAAGGTAAAAACTGACATTGTTATTCCTTCTGCACCTGCACTAAATAGTAGCAACACACCTGCAGATCGGAAGTTGCGGTGTGCGATCTGCATAGAACCATTGGTCGAAGAAACGACGACAAAATGCGGGCACATTTTCTGCAGGAATTGCATTGAAATAGCCATTGCTACTCAACACAAATGTCCCATATGTCGGCGTAAGCTTAGAAAACGAGATATTATTCGGATTTACCTTCCTTTTTCGAGTTAA

Protein sequence

MSIRSTNDLHEQRARVVERRTRLDIDLNCPPPDECIDPTGPHDEAAQYYNRHQEQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTDVSSWPPFTIWSPRTIRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSNTPADRKLRCAICIEPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRIYLPFSS

Homology

[Close]

BLAST of Cp4.1LG03g18030 vs. ExPASy Swiss-Prot
Match: P87176 (E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=slx8 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.2e-06
Identity = 41/133 (30.83%), Postives = 61/133 (45.86%), Query Frame = 0


Query: 118 PRTIRNSV----SIQEQQTTHNLDLRLSCETSSRATKVK---------TDIVIPSAPALN 177
           P ++ NS+    SI  Q TT +  + L+ ETS    K K         T+  I       
Sbjct: 132 PASVENSLTNVNSIHAQPTTISDMIDLTDETSYDPRKQKFEQGKNPSTTNAEIEKEEPSK 191

Query: 178 SSNTPADRKL---RCAICIEPLVEETTTKCGHIFCRNCIEIAIAT---QHKCPICRRKLR 232
               P+ ++L   +C IC++     + T CGHIFC  CI  A+ T     KCP+CRRK+ 
Sbjct: 192 KQVVPSSQRLADYKCVICLDSPENLSCTPCGHIFCNFCILSALGTTAATQKCPVCRRKVH 251

[Close]

BLAST of Cp4.1LG03g18030 vs. ExPASy Swiss-Prot
Match: Q6LFN2 (RING finger protein PFF0165c OS=Plasmodium falciparum (isolate 3D7) OX=36329 GN=PFF0165c PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.6e-06
Identity = 25/66 (37.88%), Postives = 38/66 (57.58%), Query Frame = 0


Query: 163  LNSSNTPADRKLRCAICIEPLVEETTTKCGHIFCRNCIEIAIATQH-KCPICRRKLRKRD 222
            L   N    R+L C++C+E        KCGHI+C NCI   + T++ KCP C+    K+D
Sbjct: 1037 LIEENNELRRRLICSVCMENFRNYIIIKCGHIYCNNCIFNNLKTRNRKCPQCKVPFDKKD 1096

Query: 223  IIRIYL 228
            + +I+L
Sbjct: 1097 LQKIFL 1102

[Close]

BLAST of Cp4.1LG03g18030 vs. ExPASy Swiss-Prot
Match: Q2TBT8 (RING finger protein 151 OS=Bos taurus OX=9913 GN=RNF151 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.3e-05
Identity = 22/63 (34.92%), Postives = 33/63 (52.38%), Query Frame = 0


Query: 163 LNSSNTPADRKLRCAICIEPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDI 222
           LN   +P D    C++C   L       C HIFC+ CI   +A Q  CP CR+++R R +
Sbjct: 7   LNLFISPPDCNFLCSVCHGVLKRPVRLPCSHIFCKKCILRWLARQKTCPCCRKEVRHRKM 66

Query: 223 IRI 226
           + +
Sbjct: 67  VHV 69

[Close]

BLAST of Cp4.1LG03g18030 vs. ExPASy Swiss-Prot
Match: Q3UWZ0 (Tripartite motif-containing protein 75 OS=Mus musculus OX=10090 GN=Trim75 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.3e-05
Identity = 20/54 (37.04%), Postives = 34/54 (62.96%), Query Frame = 0


Query: 172 RKLRCAICIEPLVEETTTKCGHIFCRNCIEIAIATQH---KCPICRRKLRKRDI 223
           ++ +C IC++ L +  T +CGH FCR+CI+   A Q     CP+CR + + R++
Sbjct: 12  KETKCPICLDDLTDPVTVECGHNFCRSCIKDFWAGQQATSSCPVCRHQCQHRNL 65

[Close]

BLAST of Cp4.1LG03g18030 vs. ExPASy Swiss-Prot
Match: Q9D9R0 (E3 ubiquitin-protein ligase RNF125 OS=Mus musculus OX=10090 GN=Rnf125 PE=2 SV=3)

HSP 1 Score: 50.4 bits (119), Expect = 3.1e-05
Identity = 20/44 (45.45%), Postives = 29/44 (65.91%), Query Frame = 0


Query: 176 CAICIEPLVEETTTKCGHIFCRNCIEIAIATQHK--CPICRRKL 218
           C++C+E L +   T+CGH+FCR+CI  +I   +K  CP CR  L
Sbjct: 37  CSVCLEVLHQPVRTRCGHVFCRSCIATSIKNNNKWTCPYCRAYL 80

[Close]

BLAST of Cp4.1LG03g18030 vs. NCBI nr
Match: XP_023528072.1 (uncharacterized protein LOC111791100 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 470 bits (1210), Expect = 2.48e-167
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MSIRSTNDLHEQRARVVERRTRLDIDLNCPPPDECIDPTGPHDEAAQYYNRHQEQATDAV 60
           MSIRSTNDLHEQRARVVERRTRLDIDLNCPPPDECIDPTGPHDEAAQYYNRHQEQATDAV
Sbjct: 1   MSIRSTNDLHEQRARVVERRTRLDIDLNCPPPDECIDPTGPHDEAAQYYNRHQEQATDAV 60

Query: 61  DEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTDVSSWPPFTIWSPRT 120
           DEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTDVSSWPPFTIWSPRT
Sbjct: 61  DEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTDVSSWPPFTIWSPRT 120

Query: 121 IRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSNTPADRKLRCAICI 180
           IRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSNTPADRKLRCAICI
Sbjct: 121 IRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSNTPADRKLRCAICI 180

Query: 181 EPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRIYLPFSS 231
           EPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRIYLPFSS
Sbjct: 181 EPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRIYLPFSS 231

[Close]

BLAST of Cp4.1LG03g18030 vs. NCBI nr
Match: KAG6582483.1 (hypothetical protein SDJN03_22485, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 456 bits (1172), Expect = 1.54e-161
Identity = 225/231 (97.40%), Postives = 227/231 (98.27%), Query Frame = 0


Query: 1   MSIRSTNDLHEQRARVVERRTRLDIDLNCPPPDECIDPTGPHDEAAQYYNRHQEQATDAV 60
           MSI+STNDLHEQRARVVERRTRLDIDLNCPPPDECIDPTGPHDEAAQY N H+EQATDAV
Sbjct: 1   MSIQSTNDLHEQRARVVERRTRLDIDLNCPPPDECIDPTGPHDEAAQYNNHHREQATDAV 60

Query: 61  DEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTDVSSWPPFTIWSPRT 120
           DEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTDVSSWPPFTIWSPRT
Sbjct: 61  DEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTDVSSWPPFTIWSPRT 120

Query: 121 IRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSNTPADRKLRCAICI 180
            RNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSS TPADRKLRCAICI
Sbjct: 121 NRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICI 180

Query: 181 EPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRIYLPFSS 231
           EPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRIYLPFSS
Sbjct: 181 EPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRIYLPFSS 231

[Close]

BLAST of Cp4.1LG03g18030 vs. NCBI nr
Match: XP_022924677.1 (E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like [Cucurbita moschata])

HSP 1 Score: 452 bits (1164), Expect = 2.56e-160
Identity = 223/231 (96.54%), Postives = 226/231 (97.84%), Query Frame = 0


Query: 1   MSIRSTNDLHEQRARVVERRTRLDIDLNCPPPDECIDPTGPHDEAAQYYNRHQEQATDAV 60
           MSI+STNDLHE+RARVVERRTRLDIDLNCPPPDECIDPTGPHDE AQY N H+EQATDAV
Sbjct: 1   MSIQSTNDLHERRARVVERRTRLDIDLNCPPPDECIDPTGPHDEVAQYNNHHREQATDAV 60

Query: 61  DEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTDVSSWPPFTIWSPRT 120
           DEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTDVSSWPPFTIWSPRT
Sbjct: 61  DEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTDVSSWPPFTIWSPRT 120

Query: 121 IRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSNTPADRKLRCAICI 180
            RNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSS TPADRKLRCAICI
Sbjct: 121 NRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICI 180

Query: 181 EPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRIYLPFSS 231
           EPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRIYLPFSS
Sbjct: 181 EPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRIYLPFSS 231

[Close]

BLAST of Cp4.1LG03g18030 vs. NCBI nr
Match: XP_022980395.1 (E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like [Cucurbita maxima])

HSP 1 Score: 449 bits (1156), Expect = 4.25e-159
Identity = 222/231 (96.10%), Postives = 226/231 (97.84%), Query Frame = 0


Query: 1   MSIRSTNDLHEQRARVVERRTRLDIDLNCPPPDECIDPTGPHDEAAQYYNRHQEQATDAV 60
           MSI+STNDLHE+RARVVERRTRLDIDLNCPPPDECIDPTGPHDEAAQY N H+EQATDAV
Sbjct: 1   MSIQSTNDLHERRARVVERRTRLDIDLNCPPPDECIDPTGPHDEAAQYNNHHREQATDAV 60

Query: 61  DEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTDVSSWPPFTIWSPRT 120
           DEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTDVSSWPPFTIWSPRT
Sbjct: 61  DEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTDVSSWPPFTIWSPRT 120

Query: 121 IRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSNTPADRKLRCAICI 180
            RNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDI IPSAPAL+SS TPADRKLRCAICI
Sbjct: 121 NRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIDIPSAPALSSSLTPADRKLRCAICI 180

Query: 181 EPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRIYLPFSS 231
           EPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRIYLPFSS
Sbjct: 181 EPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRIYLPFSS 231

[Close]

BLAST of Cp4.1LG03g18030 vs. NCBI nr
Match: XP_008438340.1 (PREDICTED: uncharacterized protein LOC103483470 [Cucumis melo] >KAA0049140.1 E3 ubiquitin-protein ligase RNF4-like [Cucumis melo var. makuwa] >TYK17421.1 E3 ubiquitin-protein ligase RNF4-like [Cucumis melo var. makuwa])

HSP 1 Score: 397 bits (1020), Expect = 2.28e-138
Identity = 190/231 (82.25%), Postives = 208/231 (90.04%), Query Frame = 0


Query: 1   MSIRSTNDLHEQRARVVERRTRLDIDLNCPPPDECIDPTGPHDEAAQYYNRHQEQATDAV 60
           MSI+S+NDLH+  ARV+ERRT LD DLNCPPPDECIDPTGP DEAAQYYN +Q QATDA+
Sbjct: 1   MSIQSSNDLHDWSARVIERRTVLDFDLNCPPPDECIDPTGPRDEAAQYYNHYQGQATDAI 60

Query: 61  DEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTDVSSWPPFTIWSPRT 120
           DEDIAIISPRKFAEARKNFRRNHFES YG V+RRNG+TEVY AL+DV++WPPFTIWSP T
Sbjct: 61  DEDIAIISPRKFAEARKNFRRNHFESGYGAVIRRNGNTEVYGALSDVTTWPPFTIWSPLT 120

Query: 121 IRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSNTPADRKLRCAICI 180
           I N+VS+QEQQT HNLDLRLSCE+SSRATK KTD  IPS  AL+SS  P DR LRCAICI
Sbjct: 121 ISNNVSLQEQQTIHNLDLRLSCESSSRATKAKTDTDIPSTLALSSSIPPTDRTLRCAICI 180

Query: 181 EPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRIYLPFSS 231
           EPLVEETTTKCGH+FCRNCIE AIATQH+CPICRRKLRKRDIIRIYLPF+S
Sbjct: 181 EPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLPFTS 231

[Close]

BLAST of Cp4.1LG03g18030 vs. ExPASy TrEMBL
Match: A0A6J1E9N0 (E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like OS=Cucurbita moschata OX=3662 GN=LOC111432108 PE=4 SV=1)

HSP 1 Score: 452 bits (1164), Expect = 1.24e-160
Identity = 223/231 (96.54%), Postives = 226/231 (97.84%), Query Frame = 0


Query: 1   MSIRSTNDLHEQRARVVERRTRLDIDLNCPPPDECIDPTGPHDEAAQYYNRHQEQATDAV 60
           MSI+STNDLHE+RARVVERRTRLDIDLNCPPPDECIDPTGPHDE AQY N H+EQATDAV
Sbjct: 1   MSIQSTNDLHERRARVVERRTRLDIDLNCPPPDECIDPTGPHDEVAQYNNHHREQATDAV 60

Query: 61  DEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTDVSSWPPFTIWSPRT 120
           DEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTDVSSWPPFTIWSPRT
Sbjct: 61  DEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTDVSSWPPFTIWSPRT 120

Query: 121 IRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSNTPADRKLRCAICI 180
            RNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSS TPADRKLRCAICI
Sbjct: 121 NRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICI 180

Query: 181 EPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRIYLPFSS 231
           EPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRIYLPFSS
Sbjct: 181 EPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRIYLPFSS 231

[Close]

BLAST of Cp4.1LG03g18030 vs. ExPASy TrEMBL
Match: A0A6J1IW57 (E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like OS=Cucurbita maxima OX=3661 GN=LOC111479771 PE=4 SV=1)

HSP 1 Score: 449 bits (1156), Expect = 2.06e-159
Identity = 222/231 (96.10%), Postives = 226/231 (97.84%), Query Frame = 0


Query: 1   MSIRSTNDLHEQRARVVERRTRLDIDLNCPPPDECIDPTGPHDEAAQYYNRHQEQATDAV 60
           MSI+STNDLHE+RARVVERRTRLDIDLNCPPPDECIDPTGPHDEAAQY N H+EQATDAV
Sbjct: 1   MSIQSTNDLHERRARVVERRTRLDIDLNCPPPDECIDPTGPHDEAAQYNNHHREQATDAV 60

Query: 61  DEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTDVSSWPPFTIWSPRT 120
           DEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTDVSSWPPFTIWSPRT
Sbjct: 61  DEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTDVSSWPPFTIWSPRT 120

Query: 121 IRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSNTPADRKLRCAICI 180
            RNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDI IPSAPAL+SS TPADRKLRCAICI
Sbjct: 121 NRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIDIPSAPALSSSLTPADRKLRCAICI 180

Query: 181 EPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRIYLPFSS 231
           EPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRIYLPFSS
Sbjct: 181 EPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRIYLPFSS 231

[Close]

BLAST of Cp4.1LG03g18030 vs. ExPASy TrEMBL
Match: A0A5A7U158 (E3 ubiquitin-protein ligase RNF4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002840 PE=4 SV=1)

HSP 1 Score: 397 bits (1020), Expect = 1.10e-138
Identity = 190/231 (82.25%), Postives = 208/231 (90.04%), Query Frame = 0


Query: 1   MSIRSTNDLHEQRARVVERRTRLDIDLNCPPPDECIDPTGPHDEAAQYYNRHQEQATDAV 60
           MSI+S+NDLH+  ARV+ERRT LD DLNCPPPDECIDPTGP DEAAQYYN +Q QATDA+
Sbjct: 1   MSIQSSNDLHDWSARVIERRTVLDFDLNCPPPDECIDPTGPRDEAAQYYNHYQGQATDAI 60

Query: 61  DEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTDVSSWPPFTIWSPRT 120
           DEDIAIISPRKFAEARKNFRRNHFES YG V+RRNG+TEVY AL+DV++WPPFTIWSP T
Sbjct: 61  DEDIAIISPRKFAEARKNFRRNHFESGYGAVIRRNGNTEVYGALSDVTTWPPFTIWSPLT 120

Query: 121 IRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSNTPADRKLRCAICI 180
           I N+VS+QEQQT HNLDLRLSCE+SSRATK KTD  IPS  AL+SS  P DR LRCAICI
Sbjct: 121 ISNNVSLQEQQTIHNLDLRLSCESSSRATKAKTDTDIPSTLALSSSIPPTDRTLRCAICI 180

Query: 181 EPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRIYLPFSS 231
           EPLVEETTTKCGH+FCRNCIE AIATQH+CPICRRKLRKRDIIRIYLPF+S
Sbjct: 181 EPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLPFTS 231

[Close]

BLAST of Cp4.1LG03g18030 vs. ExPASy TrEMBL
Match: A0A1S3AW86 (uncharacterized protein LOC103483470 OS=Cucumis melo OX=3656 GN=LOC103483470 PE=4 SV=1)

HSP 1 Score: 397 bits (1020), Expect = 1.10e-138
Identity = 190/231 (82.25%), Postives = 208/231 (90.04%), Query Frame = 0


Query: 1   MSIRSTNDLHEQRARVVERRTRLDIDLNCPPPDECIDPTGPHDEAAQYYNRHQEQATDAV 60
           MSI+S+NDLH+  ARV+ERRT LD DLNCPPPDECIDPTGP DEAAQYYN +Q QATDA+
Sbjct: 1   MSIQSSNDLHDWSARVIERRTVLDFDLNCPPPDECIDPTGPRDEAAQYYNHYQGQATDAI 60

Query: 61  DEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTDVSSWPPFTIWSPRT 120
           DEDIAIISPRKFAEARKNFRRNHFES YG V+RRNG+TEVY AL+DV++WPPFTIWSP T
Sbjct: 61  DEDIAIISPRKFAEARKNFRRNHFESGYGAVIRRNGNTEVYGALSDVTTWPPFTIWSPLT 120

Query: 121 IRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSNTPADRKLRCAICI 180
           I N+VS+QEQQT HNLDLRLSCE+SSRATK KTD  IPS  AL+SS  P DR LRCAICI
Sbjct: 121 ISNNVSLQEQQTIHNLDLRLSCESSSRATKAKTDTDIPSTLALSSSIPPTDRTLRCAICI 180

Query: 181 EPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRIYLPFSS 231
           EPLVEETTTKCGH+FCRNCIE AIATQH+CPICRRKLRKRDIIRIYLPF+S
Sbjct: 181 EPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLPFTS 231

[Close]

BLAST of Cp4.1LG03g18030 vs. ExPASy TrEMBL
Match: A0A0A0L424 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G130260 PE=4 SV=1)

HSP 1 Score: 387 bits (993), Expect = 1.43e-134
Identity = 186/231 (80.52%), Postives = 206/231 (89.18%), Query Frame = 0


Query: 1   MSIRSTNDLHEQRARVVERRTRLDIDLNCPPPDECIDPTGPHDEAAQYYNRHQEQATDAV 60
           MSI+S+NDLH+  +RV+ERRT LD DLNCPPPDECIDPTG  DEAAQYYN +Q QATDA+
Sbjct: 1   MSIQSSNDLHDWSSRVIERRTVLDFDLNCPPPDECIDPTGLPDEAAQYYNHYQGQATDAI 60

Query: 61  DEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTDVSSWPPFTIWSPRT 120
           DEDIAIISPRKFAEARKNFRRNHFES  G V+RRNG+TEVY AL+DV++WPPFTIWSP T
Sbjct: 61  DEDIAIISPRKFAEARKNFRRNHFESGCGAVIRRNGNTEVYGALSDVTTWPPFTIWSPLT 120

Query: 121 IRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSNTPADRKLRCAICI 180
           I N+VS+QEQQT HNLDLRLSCE+SSRATK KTD  IPS  AL+SS  P DR LRCAICI
Sbjct: 121 ISNNVSLQEQQTIHNLDLRLSCESSSRATKAKTDTDIPSTLALSSSIPPTDRTLRCAICI 180

Query: 181 EPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRIYLPFSS 231
           EPLVEETTTKCGH+FCRNCIE AIATQH+CPICRRKLR+RDIIRIYLPF+S
Sbjct: 181 EPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKLRRRDIIRIYLPFTS 231

[Close]

BLAST of Cp4.1LG03g18030 vs. TAIR 10
Match: AT5G48655.2 (RING/U-box superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 6.1e-17
Identity = 67/219 (30.59%), Postives = 102/219 (46.58%), Query Frame = 0


Query: 19  RRTRLDIDLNCPPPDE---------CIDPTGPHDEAAQYYNRHQEQATDAVDEDIAIISP 78
           RR +  IDLN  P D+            P  P   A    +       DA+++D+   S 
Sbjct: 13  RRRKAVIDLNAVPVDQEGTSASVRTLTVPITPSQPAPTMID------VDAIEDDVIESSA 72

Query: 79  RKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTDVSSWPPFTIWSPRTIRNSVSIQE 138
             FAEA K+  RN       V V   G+T   + +++            R I +S S+ +
Sbjct: 73  SAFAEA-KSKSRNARRRPLMVDVESGGTTRFPANISN----------KRRRIPSSESVID 132

Query: 139 QQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSNTPADRKLRCAICIEPLVEETTT 198
                +  +      SSR ++ K     P+ P       P + K  C IC+ P  EE +T
Sbjct: 133 ---CEHASVNDEVNMSSRVSRSKA----PAPP-------PEEPKFTCPICMCPFTEEMST 192

Query: 199 KCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRIYLP 229
           KCGHIFC+ CI++AI+ Q KCP CR+K+  +++IR++LP
Sbjct: 193 KCGHIFCKGCIKMAISRQGKCPTCRKKVTAKELIRVFLP 200

[Close]

BLAST of Cp4.1LG03g18030 vs. TAIR 10
Match: AT5G48655.1 (RING/U-box superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 6.1e-17
Identity = 67/219 (30.59%), Postives = 102/219 (46.58%), Query Frame = 0


Query: 19  RRTRLDIDLNCPPPDE---------CIDPTGPHDEAAQYYNRHQEQATDAVDEDIAIISP 78
           RR +  IDLN  P D+            P  P   A    +       DA+++D+   S 
Sbjct: 13  RRRKAVIDLNAVPVDQEGTSASVRTLTVPITPSQPAPTMID------VDAIEDDVIESSA 72

Query: 79  RKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTDVSSWPPFTIWSPRTIRNSVSIQE 138
             FAEA K+  RN       V V   G+T   + +++            R I +S S+ +
Sbjct: 73  SAFAEA-KSKSRNARRRPLMVDVESGGTTRFPANISN----------KRRRIPSSESVID 132

Query: 139 QQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSNTPADRKLRCAICIEPLVEETTT 198
                +  +      SSR ++ K     P+ P       P + K  C IC+ P  EE +T
Sbjct: 133 ---CEHASVNDEVNMSSRVSRSKA----PAPP-------PEEPKFTCPICMCPFTEEMST 192

Query: 199 KCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRIYLP 229
           KCGHIFC+ CI++AI+ Q KCP CR+K+  +++IR++LP
Sbjct: 193 KCGHIFCKGCIKMAISRQGKCPTCRKKVTAKELIRVFLP 200

[Close]

BLAST of Cp4.1LG03g18030 vs. TAIR 10
Match: AT5G48655.3 (RING/U-box superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 6.1e-17
Identity = 67/219 (30.59%), Postives = 102/219 (46.58%), Query Frame = 0


Query: 19  RRTRLDIDLNCPPPDE---------CIDPTGPHDEAAQYYNRHQEQATDAVDEDIAIISP 78
           RR +  IDLN  P D+            P  P   A    +       DA+++D+   S 
Sbjct: 13  RRRKAVIDLNAVPVDQEGTSASVRTLTVPITPSQPAPTMID------VDAIEDDVIESSA 72

Query: 79  RKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTDVSSWPPFTIWSPRTIRNSVSIQE 138
             FAEA K+  RN       V V   G+T   + +++            R I +S S+ +
Sbjct: 73  SAFAEA-KSKSRNARRRPLMVDVESGGTTRFPANISN----------KRRRIPSSESVID 132

Query: 139 QQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSNTPADRKLRCAICIEPLVEETTT 198
                +  +      SSR ++ K     P+ P       P + K  C IC+ P  EE +T
Sbjct: 133 ---CEHASVNDEVNMSSRVSRSKA----PAPP-------PEEPKFTCPICMCPFTEEMST 192

Query: 199 KCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRIYLP 229
           KCGHIFC+ CI++AI+ Q KCP CR+K+  +++IR++LP
Sbjct: 193 KCGHIFCKGCIKMAISRQGKCPTCRKKVTAKELIRVFLP 200

[Close]

BLAST of Cp4.1LG03g18030 vs. TAIR 10
Match: AT3G07200.1 (RING/U-box superfamily protein )

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-14
Identity = 35/87 (40.23%), Postives = 54/87 (62.07%), Query Frame = 0


Query: 144 TSSRATKVKTDIVIPSAPALNSSNTP--ADRKLRCAICIEPLVEETTTKCGHIFCRNCIE 203
           T  R+ +   D V  + P  + +  P   + K  C IC+ P  +E +TKCGHIFC+ CI+
Sbjct: 93  TRRRSDQTSVDSVELNKPRKSKAVAPPVEEPKFSCPICLCPFTQEVSTKCGHIFCKKCIK 152

Query: 204 IAIATQHKCPICRRKLRKRDIIRIYLP 229
            A++ Q KCP CR+K+  +D+IR++LP
Sbjct: 153 NALSLQAKCPTCRKKITVKDLIRVFLP 179

[Close]

BLAST of Cp4.1LG03g18030 vs. TAIR 10
Match: AT3G07200.2 (RING/U-box superfamily protein )

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-14
Identity = 35/87 (40.23%), Postives = 54/87 (62.07%), Query Frame = 0


Query: 144 TSSRATKVKTDIVIPSAPALNSSNTP--ADRKLRCAICIEPLVEETTTKCGHIFCRNCIE 203
           T  R+ +   D V  + P  + +  P   + K  C IC+ P  +E +TKCGHIFC+ CI+
Sbjct: 93  TRRRSDQTSVDSVELNKPRKSKAVAPPVEEPKFSCPICLCPFTQEVSTKCGHIFCKKCIK 152

Query: 204 IAIATQHKCPICRRKLRKRDIIRIYLP 229
            A++ Q KCP CR+K+  +D+IR++LP
Sbjct: 153 NALSLQAKCPTCRKKITVKDLIRVFLP 179

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g18030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P87176	1.2e-06	30.83	E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8 OS=Schizosaccharomyces...	[more]
Q6LFN2	3.6e-06	37.88	RING finger protein PFF0165c OS=Plasmodium falciparum (isolate 3D7) OX=36329 GN=...	[more]
Q2TBT8	2.3e-05	34.92	RING finger protein 151 OS=Bos taurus OX=9913 GN=RNF151 PE=2 SV=1	[more]
Q3UWZ0	2.3e-05	37.04	Tripartite motif-containing protein 75 OS=Mus musculus OX=10090 GN=Trim75 PE=2 S...	[more]
Q9D9R0	3.1e-05	45.45	E3 ubiquitin-protein ligase RNF125 OS=Mus musculus OX=10090 GN=Rnf125 PE=2 SV=3	[more]

BLAST of Cp4.1LG03g18030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023528072.1	2.48e-167	100.00	uncharacterized protein LOC111791100 [Cucurbita pepo subsp. pepo]	[more]
KAG6582483.1	1.54e-161	97.40	hypothetical protein SDJN03_22485, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022924677.1	2.56e-160	96.54	E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like [Cucurbita moscha...	[more]
XP_022980395.1	4.25e-159	96.10	E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like [Cucurbita maxima...	[more]
XP_008438340.1	2.28e-138	82.25	PREDICTED: uncharacterized protein LOC103483470 [Cucumis melo] >KAA0049140.1 E3 ...	[more]

BLAST of Cp4.1LG03g18030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E9N0	1.24e-160	96.54	E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like OS=Cucurbita mosc...	[more]
A0A6J1IW57	2.06e-159	96.10	E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like OS=Cucurbita maxi...	[more]
A0A5A7U158	1.10e-138	82.25	E3 ubiquitin-protein ligase RNF4-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3AW86	1.10e-138	82.25	uncharacterized protein LOC103483470 OS=Cucumis melo OX=3656 GN=LOC103483470 PE=...	[more]
A0A0A0L424	1.43e-134	80.52	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G130260 P...	[more]

BLAST of Cp4.1LG03g18030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48655.2	6.1e-17	30.59	RING/U-box superfamily protein	[more]
AT5G48655.1	6.1e-17	30.59	RING/U-box superfamily protein	[more]
AT5G48655.3	6.1e-17	30.59	RING/U-box superfamily protein	[more]
AT3G07200.1	1.3e-14	40.23	RING/U-box superfamily protein	[more]
AT3G07200.2	1.3e-14	40.23	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 176..213 e-value: 9.7E-5 score: 31.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 176..214 score: 12.917115
None	No IPR available	PFAM	PF13923	zf-C3HC4_2	coord: 175..213 e-value: 7.7E-9 score: 35.2
None	No IPR available	PANTHER	PTHR47094	ELFLESS, ISOFORM B	coord: 1..228
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 166..219
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 159..228 e-value: 1.3E-17 score: 65.0
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 191..200

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g18030.1	Cp4.1LG03g18030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding