Cp4.1LG03g16650 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG03g16650
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionAT-rich interactive domain-containing protein 2-like isoform X1
LocationCp4.1LG03: 13167664 .. 13171503 (-)
RNA-Seq ExpressionCp4.1LG03g16650
SyntenyCp4.1LG03g16650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGGGATTAACGTATGCTTATAAACCTTGAGGAAAAAGATCCATTTCTTTTAATACAAAGATACCGTTCCTTGTTTGATTCCGAATCTCATCTCTTTCTTCCTTGTTCCTTCTACTCAGCTTCGGAGTTCCGTCGCCGGACAGAGTTCCGAACTTCGAAGAAGATAACCGGAGGTTCTGATAAGCGCCGCCGATTCTAGGAGCTCATCGTGCAAATACGATTTACGAGGCTGAACTCCTATGGTATCCTCTAACGATCTTGACGTACGAAATCAATCAATCTAGAGCGATTCAAATAATCGTGTATTAGTATTTAGTAATAAAAGAGACGAAGCGCGGGAGATCATTTTATTCTGGTTCCGGAATTCGATGTTCTTGATCTCATTGTTAATCTCTTCCCGCCAAAAAGTTTTGGTTATCCGAAAATTTACCTGTGGATATATACTTTTATTCCTAGTCCACAAATCTTCCGTCTCGTAGTCTTTTTGCTGCATTACGATTTTTTTTCCCCCTCTTTTATCGTTCGAAGGAAAATTTATATTTGTTTTTAGAACTCGAACCATCAACAATCAATGTTGTGATGGTTAATGGGGCTGCAATAGGTTTTGCGAGGATCTTTGGGAAAGCTTATAGCAAGTTGTCGACGAACTAGGATGTTTTCAGAGTATCGCCTATTGACTCAGATAGTGCGATAAGATTTATTGTTGATGTTTAGTTTAAAATGCGTCCTGAAATTCGGTCGAGGATGAATTTGACTGGTTTGAATGTATGAAAGGGACCCTTGTGTACTAAGGCAGTTTTGGGTCTCAAGACTCTGAACTAAAATGACTTTAGACGAGCAAAATTTCGATTTGTTTAAGCTATTTGTGGCTGTACGAGATAAGGGTGGTTATAATGTTGTATCGAGGAAGGATCTGTGGGACCTGGTAGCAGAAGAATCTGGTTTAGGTTCTATCATCTCCTCCACGGTGAAAGTGCTGTACGTTGAGTATTTGAATGTTTTAGAGAGATTTCTTGAAAGGGTTGTTGAGGATAGAGACTCCACAAATAGTTGCAGCAGTAATGGAGACAGTACGGGCTTCGGACTCAATTGCTCGCCGCTGGATATTCAGTCTTTGAAGAAGACCAATGATTTGCAGGACTCAAATTTTTCTGTATGTGATGATAGGATTGTGGTTCCAAAGACTGATACGGACAATTATACTGCTGGTTGTGGGGAAACCTTTTGCCAATCAAATAAGAGCAAGTCGGACATTCATGACACAAGTGACTTGTATGAAGATGAAGACTTTAGCCTGGAATTAGCATCCAATGTGGACGAGAATTTTGATGACATTGAGAAATCCCATAGTCTAAACATTCAGAAATATGAAAATGCATTAGTGGACGGAGTAGAAAGCAATGTGGAGTTCCCTTACGACTGCAGAAAGTGTGATGGTTATGATTCTGATAACAAACAAGGAATGTCAGTCGAGGAACATAATTTTAGCCATGAGAAAAAGTGTGAGTCCATGTTAGGAATGTTGAATTGGATCGCAGAAATTGCAAAGAATCCATGTAACCCTGTTATTGGGTTATTACCTGAGCGTTCGGAGTGGAAGTCAAGCGCAGATGAAGAGATCTGTAAGCAAGTTCTTCTGATTCGAGAGGCAATGTTCCTGCAAGGACATATTAATTCTTATGCTGTGCAGGTATATTTCTATGAACACTTGATCTTGCAAAAATTATTCACATGAATATTATTCCATCCTACTTATAATCGTAACATTCAGTCTGAAACCATTTTGTAAAAGAGATATCAACATGTCGCATGTATAGTGCTGTGCACTCCCTTGCTTGATACTTCAAAATGTGAGTATACAGTTCAATGCGCTAGTGCTTGTTGTCTGTGTCTATTGCAGCTCTACAAGCACTTGGTTCGTTTTATACTTGTGAAAAATAGCCACGAAACAACCTGTTGTGTAGTTTTTCAGGATGATAGCATGGGTTCTTCCTTTCATGTTCTTGAAATAATTGTTGGCACATTTATTTAGTGCCTCATCTGTTTTCTGCATTGGTAGATGTAAAGGTTATTATATAGGCTTACCATGGTTCTTTGTTCGGGTTTCGGTTTTATGGATAATCTTGTCTACTTGATGCAGCACCATTACATTCTCTGCTTATTGTGCTAGATCGCAAATAATGTTCTGTGTGACTAGGAATATGCAAGTTTATGAAATACACTGTTAGTATTTGAATCTTTTTTCTGCAGTTTAGCATTCTCCATGTTTTCAGTATGACAATATGGGTTAAGATGCTTATGTTCTTCAAAGAATGCTTAAAAATTGAAAACTTGGCTACAATTTCCGATCTCTTTAGCGTGTAGTTAATGCATGGTAATGTTATTTAAGCGTTCGTCTTATTATAATATCAGGGCATACATCAAGGCTCCAGTTACAAGCTAAGAAAGAGGACAAAATCTGGGAAAGTATTTCCTTATGGGATGAGTAGTGCTCAAAGTTTTGTACTGAGGACGGGCAACCGACTAGACCAAGAAATTCTTGTAACAACTGATTCCTGGATGCCAGTTTACATGGGGACATCTGCCTCAAAGCAAATACGTTTAGGGCCAAAGTTTCAAGTTGAAGTACCAGAATGGAGTGGTATAACATCTGGAAGCGACTCTAAGTGGTTGGGGACACTGGTTTGGCCTTCGGATAATGATAGCCAAGCATATCGCCATGAAGACAATCTCGTTGGGAAGGGGCGGGAAGATTCGTGTAAATGTCAGGTACGCGGTTCCCCTAAATGCACTCAATATCATATTCTAGAGAAAAGATTGAAAGTTAAGATGGAAATAGGCTATGCATTCTATAACTGGAAATTCGATAGAATGGGGGAGGAAGTAAGACTTCATTGGACCGGGAAAGAGGAGCGTAAGTTTAAAAGTGCAGTGAGGTATAGTTCTGAATCTTTTAAGCAGTCTTTCAGGGATCATATTTCCAAGTTTTTCCCTTATAAAAGCAGAGAAGATATAGTATGCTACTACTTTAATGTCTTCATATTGCATCGCAGAAGATTTCAGAACAGATTCACTCCAGATAACATTTGCAGTGATGATGAACTGGAATCTAAGTAGTCGGAAAAAAACCTCATTGGTAAGTCCATAACTGTGTAGAGATGGGAAAATCAGGATATTTTTCTCTTTTCTTTTCCTTGGTTTCATATACATATTTGTTCAGTTACGGGTTGATCAGTGCATAATCTGTATATTTGGGAAATAATAGCTGGAAGAGATTCATGTAGTTAGTTTTGGGCCTTCTGAAGTGTTTTGTGCTTTCATACAACCCCTTCATATTCCTAGTTGCAACATCAATGAACATGTTCATCTTCTTTTTTTAGCCTCAAATCCTTTTTCATTGGCCCCTTGTAGTGCCTGAAGAACATCCAATTCTTGACAGTGTAGAAGTTTTTGCCCAATATACTCAAACCATAGGATGCACACCTCCTACCTACAACTGGAAGGGGTATATTTTTTGCTTGCTGGGGAGAGGTTTGGATGTCTTTTGATACAGTTTCAAGAAAGGAAATATTGTTTGATAAGCTTGTTACTAAGAAACCTAGGTGGGTTTTGTTAAGTCACTCATCAATTTCATTAGATTTTGTGTGTATTTAGATTACCCAAATGCTTTCCTTTTAGAGCTTTGGAACCCAAATGCTTGTGGAGGTTGGAAAAAACTAGTGGTTTTGGACTTTTCTTGCTAATGAATGTGATATTAGCATGAAAAAACTAATATGTAAAATTATATTTCCTATCAAAATTGAAGGAGAAATCCTAAAATGGAAATTTTGCCCCATGGTT

mRNA sequence

TAGGGATTAACGTATGCTTATAAACCTTGAGGAAAAAGATCCATTTCTTTTAATACAAAGATACCGTTCCTTGTTTGATTCCGAATCTCATCTCTTTCTTCCTTGTTCCTTCTACTCAGCTTCGGAGTTCCGTCGCCGGACAGAGTTCCGAACTTCGAAGAAGATAACCGGAGGTTCTGATAAGCGCCGCCGATTCTAGGAGCTCATCGTGCAAATACGATTTACGAGGCTGAACTCCTATGGTATCCTCTAACGATCTTGACGTACGAAATCAATCAATCTAGAGCGATTCAAATAATCGTGTATTAGTATTTAGTAATAAAAGAGACGAAGCGCGGGAGATCATTTTATTCTGGTTCCGGAATTCGATGTTCTTGATCTCATTGTTAATCTCTTCCCGCCAAAAAGTTTTGGTTATCCGAAAATTTACCTGTGGATATATACTTTTATTCCTAGTCCACAAATCTTCCGTCTCGTAGTCTTTTTGCTGCATTACGATTTTTTTTCCCCCTCTTTTATCGTTCGAAGGAAAATTTATATTTGTTTTTAGAACTCGAACCATCAACAATCAATGTTGTGATGGTTAATGGGGCTGCAATAGGTTTTGCGAGGATCTTTGGGAAAGCTTATAGCAAGTTGTCGACGAACTAGGATGTTTTCAGAGTATCGCCTATTGACTCAGATAGTGCGATAAGATTTATTGTTGATGTTTAGTTTAAAATGCGTCCTGAAATTCGGTCGAGGATGAATTTGACTGGTTTGAATGTATGAAAGGGACCCTTGTGTACTAAGGCAGTTTTGGGTCTCAAGACTCTGAACTAAAATGACTTTAGACGAGCAAAATTTCGATTTGTTTAAGCTATTTGTGGCTGTACGAGATAAGGGTGGTTATAATGTTGTATCGAGGAAGGATCTGTGGGACCTGGTAGCAGAAGAATCTGGTTTAGGTTCTATCATCTCCTCCACGGTGAAAGTGCTGTACGTTGAGTATTTGAATGTTTTAGAGAGATTTCTTGAAAGGGTTGTTGAGGATAGAGACTCCACAAATAGTTGCAGCAGTAATGGAGACAGTACGGGCTTCGGACTCAATTGCTCGCCGCTGGATATTCAGTCTTTGAAGAAGACCAATGATTTGCAGGACTCAAATTTTTCTGTATGTGATGATAGGATTGTGGTTCCAAAGACTGATACGGACAATTATACTGCTGGTTGTGGGGAAACCTTTTGCCAATCAAATAAGAGCAAGTCGGACATTCATGACACAAGTGACTTGTATGAAGATGAAGACTTTAGCCTGGAATTAGCATCCAATGTGGACGAGAATTTTGATGACATTGAGAAATCCCATAGTCTAAACATTCAGAAATATGAAAATGCATTAGTGGACGGAGTAGAAAGCAATGTGGAGTTCCCTTACGACTGCAGAAAGTGTGATGGTTATGATTCTGATAACAAACAAGGAATGTCAGTCGAGGAACATAATTTTAGCCATGAGAAAAAGTGTGAGTCCATGTTAGGAATGTTGAATTGGATCGCAGAAATTGCAAAGAATCCATGTAACCCTGTTATTGGGTTATTACCTGAGCGTTCGGAGTGGAAGTCAAGCGCAGATGAAGAGATCTGTAAGCAAGTTCTTCTGATTCGAGAGGCAATGTTCCTGCAAGGACATATTAATTCTTATGCTGTGCAGGGCATACATCAAGGCTCCAGTTACAAGCTAAGAAAGAGGACAAAATCTGGGAAAGTATTTCCTTATGGGATGAGTAGTGCTCAAAGTTTTGTACTGAGGACGGGCAACCGACTAGACCAAGAAATTCTTGTAACAACTGATTCCTGGATGCCAGTTTACATGGGGACATCTGCCTCAAAGCAAATACGTTTAGGGCCAAAGTTTCAAGTTGAAGTACCAGAATGGAGTGGTATAACATCTGGAAGCGACTCTAAGTGGTTGGGGACACTGGTTTGGCCTTCGGATAATGATAGCCAAGCATATCGCCATGAAGACAATCTCGTTGGGAAGGGGCGGGAAGATTCGTGTAAATGTCAGGTACGCGGTTCCCCTAAATGCACTCAATATCATATTCTAGAGAAAAGATTGAAAGTTAAGATGGAAATAGGCTATGCATTCTATAACTGGAAATTCGATAGAATGGGGGAGGAAGTAAGACTTCATTGGACCGGGAAAGAGGAGCGTAAGTTTAAAAGTGCAGTGAGAAGATTTCAGAACAGATTCACTCCAGATAACATTTGCAGTGATGATGAACTGGAATCTAAGTAGTCGGAAAAAAACCTCATTGTGCCTGAAGAACATCCAATTCTTGACAGTGTAGAAGTTTTTGCCCAATATACTCAAACCATAGGATGCACACCTCCTACCTACAACTGGAAGGGGTATATTTTTTGCTTGCTGGGGAGAGGTTTGGATGTCTTTTGATACAGTTTCAAGAAAGGAAATATTGTTTGATAAGCTTGTTACTAAGAAACCTAGGTGGGTTTTGTTAAGTCACTCATCAATTTCATTAGATTTTGTGTGTATTTAGATTACCCAAATGCTTTCCTTTTAGAGCTTTGGAACCCAAATGCTTGTGGAGGTTGGAAAAAACTAGTGGTTTTGGACTTTTCTTGCTAATGAATGTGATATTAGCATGAAAAAACTAATATGTAAAATTATATTTCCTATCAAAATTGAAGGAGAAATCCTAAAATGGAAATTTTGCCCCATGGTT

Coding sequence (CDS)

ATGACTTTAGACGAGCAAAATTTCGATTTGTTTAAGCTATTTGTGGCTGTACGAGATAAGGGTGGTTATAATGTTGTATCGAGGAAGGATCTGTGGGACCTGGTAGCAGAAGAATCTGGTTTAGGTTCTATCATCTCCTCCACGGTGAAAGTGCTGTACGTTGAGTATTTGAATGTTTTAGAGAGATTTCTTGAAAGGGTTGTTGAGGATAGAGACTCCACAAATAGTTGCAGCAGTAATGGAGACAGTACGGGCTTCGGACTCAATTGCTCGCCGCTGGATATTCAGTCTTTGAAGAAGACCAATGATTTGCAGGACTCAAATTTTTCTGTATGTGATGATAGGATTGTGGTTCCAAAGACTGATACGGACAATTATACTGCTGGTTGTGGGGAAACCTTTTGCCAATCAAATAAGAGCAAGTCGGACATTCATGACACAAGTGACTTGTATGAAGATGAAGACTTTAGCCTGGAATTAGCATCCAATGTGGACGAGAATTTTGATGACATTGAGAAATCCCATAGTCTAAACATTCAGAAATATGAAAATGCATTAGTGGACGGAGTAGAAAGCAATGTGGAGTTCCCTTACGACTGCAGAAAGTGTGATGGTTATGATTCTGATAACAAACAAGGAATGTCAGTCGAGGAACATAATTTTAGCCATGAGAAAAAGTGTGAGTCCATGTTAGGAATGTTGAATTGGATCGCAGAAATTGCAAAGAATCCATGTAACCCTGTTATTGGGTTATTACCTGAGCGTTCGGAGTGGAAGTCAAGCGCAGATGAAGAGATCTGTAAGCAAGTTCTTCTGATTCGAGAGGCAATGTTCCTGCAAGGACATATTAATTCTTATGCTGTGCAGGGCATACATCAAGGCTCCAGTTACAAGCTAAGAAAGAGGACAAAATCTGGGAAAGTATTTCCTTATGGGATGAGTAGTGCTCAAAGTTTTGTACTGAGGACGGGCAACCGACTAGACCAAGAAATTCTTGTAACAACTGATTCCTGGATGCCAGTTTACATGGGGACATCTGCCTCAAAGCAAATACGTTTAGGGCCAAAGTTTCAAGTTGAAGTACCAGAATGGAGTGGTATAACATCTGGAAGCGACTCTAAGTGGTTGGGGACACTGGTTTGGCCTTCGGATAATGATAGCCAAGCATATCGCCATGAAGACAATCTCGTTGGGAAGGGGCGGGAAGATTCGTGTAAATGTCAGGTACGCGGTTCCCCTAAATGCACTCAATATCATATTCTAGAGAAAAGATTGAAAGTTAAGATGGAAATAGGCTATGCATTCTATAACTGGAAATTCGATAGAATGGGGGAGGAAGTAAGACTTCATTGGACCGGGAAAGAGGAGCGTAAGTTTAAAAGTGCAGTGAGAAGATTTCAGAACAGATTCACTCCAGATAACATTTGCAGTGATGATGAACTGGAATCTAAGTAG

Protein sequence

MTLDEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVLERFLERVVEDRDSTNSCSSNGDSTGFGLNCSPLDIQSLKKTNDLQDSNFSVCDDRIVVPKTDTDNYTAGCGETFCQSNKSKSDIHDTSDLYEDEDFSLELASNVDENFDDIEKSHSLNIQKYENALVDGVESNVEFPYDCRKCDGYDSDNKQGMSVEEHNFSHEKKCESMLGMLNWIAEIAKNPCNPVIGLLPERSEWKSSADEEICKQVLLIREAMFLQGHINSYAVQGIHQGSSYKLRKRTKSGKVFPYGMSSAQSFVLRTGNRLDQEILVTTDSWMPVYMGTSASKQIRLGPKFQVEVPEWSGITSGSDSKWLGTLVWPSDNDSQAYRHEDNLVGKGREDSCKCQVRGSPKCTQYHILEKRLKVKMEIGYAFYNWKFDRMGEEVRLHWTGKEERKFKSAVRRFQNRFTPDNICSDDELESK
Homology
[Close]
BLAST of Cp4.1LG03g16650 vs. ExPASy Swiss-Prot
Match: Q84JT7 (AT-rich interactive domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=ARID1 PE=2 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 9.8e-46
Identity = 147/476 (30.88%), Postives = 218/476 (45.80%), Query Frame = 0 

Query: 1   MTLDEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL 60
           MT + +  DLF LF+ V  KGG++ VS    WD V +ESGL S  S++ K++YV+YL+  
Sbjct: 72  MTGEGRTVDLFNLFLNVTHKGGFDAVSENGSWDEVVQESGLESYDSASAKLIYVKYLDAF 131

Query: 61  ERFLERVVEDRDSTNSCSSNGDSTGFGLNCSPLDIQSLKKTNDLQDSNFSVCDDRIVVPK 120
            R+L RVV      +S   +G S       +   +  +KK  +L+             P 
Sbjct: 132 GRWLNRVVAGDTDVSSVELSGISDALVARLNGF-LSEVKKKYELRKGR----------PA 191

Query: 121 TDTDNYTAGCGETFCQSNKSKSDIHDTSDLYEDEDFSLELASNVDENFDDIEKSHSLNIQ 180
            +                + K  I  T   Y+      E ASN     D +++     + 
Sbjct: 192 KEL-------------GAELKWFISKTKRRYDKHHVGKESASN-----DAVKEFQGSKLA 251

Query: 181 KYENALVDGVESNVEFPYDCRKCDGYDSDNKQGMSVEEHNFSHEKKCESMLGMLNWIAEI 240
           +     +  +ES                        +E +   ++K E  L  L W++++
Sbjct: 252 ERRLEQIMILES----------------------VTQECSSPGKRKRECPLETLKWLSDV 311

Query: 241 AKNPCNPVIGLLPERSEWKSSADEEICKQVLLIREAMFLQGHI---NSYAVQGIH----- 300
           AK+PC+P +G++P+RSEW S   EE  KQ+LL R +              VQ +H     
Sbjct: 312 AKDPCDPSLGIVPDRSEWVSYGSEEPWKQLLLFRASRTNNDSACEKTWQKVQKMHPCLYD 371

Query: 301 --QGSSYKLRKRTKSGKVFPYGMSSAQSFVLRTGNRLDQEILVTTDSWMPVYMGTSASKQ 360
              G+SY LR+R  S + +  G         +TGN  D              +G+S  + 
Sbjct: 372 DSAGASYNLRERL-SYEDYKRG---------KTGNGSD--------------IGSSDEED 431

Query: 361 ---IRLGPKFQVEVPEWSGITSGSDSKWLGTLVWP--SDNDSQAYRHEDNLVGKGREDSC 420
                +G KFQ +VPEW+GIT  SDSKWLGT +WP   +        E + +GKGR+D C
Sbjct: 432 RPCALVGSKFQAKVPEWTGITPESDSKWLGTRIWPLTKEQTKANLLIERDRIGKGRQDPC 472

Query: 421 KCQVRGSPKCTQYHILEKRLKVKMEIGYAFYNWKFDRMGEEVRLHWTGKEERKFKS 462
            C   GS +C ++HI  KR K+K+E+G AFY W FD MGE    +WT  E +K KS
Sbjct: 492 GCHNPGSIECVKFHITAKRDKLKLELGPAFYMWCFDVMGECTLQYWTDLELKKIKS 472

[Close]
BLAST of Cp4.1LG03g16650 vs. ExPASy Swiss-Prot
Match: Q9LDD4 (AT-rich interactive domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=ARID2 PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 6.4e-45
Identity = 159/558 (28.49%), Postives = 251/558 (44.98%), Query Frame = 0 

Query: 4   DEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVLERF 63
           D +N DLFKLFV VR++ G++ VSRK LW++VAE+ G    +  ++ ++Y++YLN +E++
Sbjct: 53  DGKNVDLFKLFVLVREREGFDTVSRKRLWEVVAEKLGFDCSLVPSLILIYLKYLNRMEKW 112

Query: 64  LERVVEDRDSTNSCSSNGDSTGFGLNCSPL-----DIQSLKKTNDLQDSNFSVCDDRIVV 123
               VE+    N    N DS   G     L       +SL      Q  N +V       
Sbjct: 113 ---AVEESRIVN--WDNKDSEKKGCYSGMLHELGNGFKSLLDNGKCQKRNRAV------- 172

Query: 124 PKTDTDNYTAGCG---ETFCQSNKSKSDIHDTSDLYEDEDFSLELASNVDENFDDIEKSH 183
                     GC    E+  + ++S+    ++    +D+D  + L+S V           
Sbjct: 173 --------AFGCNHMEESCSEFDRSRKRFRES----DDDDKGVGLSSVVIR--------- 232

Query: 184 SLNIQKYENALVDGVESNVEFPYDCRKCDGYDSDNKQGMSVEEHNFSHEKKCESMLGMLN 243
                  E  +V  VE                    +G+S    +FS EK+ + + GML 
Sbjct: 233 -------EETVVCAVE--------------------EGLS----DFSLEKR-DDLPGMLK 292

Query: 244 WIAEIAKNPCNPVIGLLPERSEWKSSADEEICKQVLLIREAMFLQ--------------G 303
           W+A +A +P +P IG++P  S+WK     +   QV   + ++ +Q              G
Sbjct: 293 WLALVATSPHDPAIGVIPHSSKWKQYNGNKCWLQVARAKNSLLVQRDNAELRYRYHPFRG 352

Query: 304 HINSYAVQGIHQGSSY--------KLRKRTKSGKVFPYGMSS---AQSFVLRTGNRLD-- 363
           H      Q IH  S Y        +LR   +   +  +  SS     S V  + +R    
Sbjct: 353 H------QNIHHPSMYEDDRKSIGRLRYSIRPPNLSKHCSSSCCNGSSLVSLSKSRSTKC 412

Query: 364 QEILVTTDSWMPVYMGTSASKQ----------IRLGPKFQVEVPEWSGITSGSDSKWLGT 423
           +++ +       +  GTS +++          I++G + Q +V EW+     SDSKWLGT
Sbjct: 413 RKLTIIASERAGLTAGTSRARKRNKAEIPRRCIKVGHQHQAQVDEWTESGVDSDSKWLGT 472

Query: 424 LVWPSDNDSQAYRHEDN-LVGKGREDSCKCQVRGSPKCTQYHILEKRLKVKMEIGYAFYN 481
            +WP +N     +   N LVGKGR DSC C++ G  +CT+ HI EKR+++K E+G  F++
Sbjct: 473 RIWPPENSEALDQTLGNDLVGKGRPDSCSCELSGFVECTRLHIAEKRMELKRELGDDFFH 532

[Close]
BLAST of Cp4.1LG03g16650 vs. NCBI nr
Match: XP_023527666.1 (AT-rich interactive domain-containing protein 1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 988 bits (2555), Expect = 0.0
Identity = 484/484 (100.00%), Postives = 484/484 (100.00%), Query Frame = 0 

Query: 1   MTLDEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL 60
           MTLDEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL
Sbjct: 1   MTLDEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL 60

Query: 61  ERFLERVVEDRDSTNSCSSNGDSTGFGLNCSPLDIQSLKKTNDLQDSNFSVCDDRIVVPK 120
           ERFLERVVEDRDSTNSCSSNGDSTGFGLNCSPLDIQSLKKTNDLQDSNFSVCDDRIVVPK
Sbjct: 61  ERFLERVVEDRDSTNSCSSNGDSTGFGLNCSPLDIQSLKKTNDLQDSNFSVCDDRIVVPK 120

Query: 121 TDTDNYTAGCGETFCQSNKSKSDIHDTSDLYEDEDFSLELASNVDENFDDIEKSHSLNIQ 180
           TDTDNYTAGCGETFCQSNKSKSDIHDTSDLYEDEDFSLELASNVDENFDDIEKSHSLNIQ
Sbjct: 121 TDTDNYTAGCGETFCQSNKSKSDIHDTSDLYEDEDFSLELASNVDENFDDIEKSHSLNIQ 180

Query: 181 KYENALVDGVESNVEFPYDCRKCDGYDSDNKQGMSVEEHNFSHEKKCESMLGMLNWIAEI 240
           KYENALVDGVESNVEFPYDCRKCDGYDSDNKQGMSVEEHNFSHEKKCESMLGMLNWIAEI
Sbjct: 181 KYENALVDGVESNVEFPYDCRKCDGYDSDNKQGMSVEEHNFSHEKKCESMLGMLNWIAEI 240

Query: 241 AKNPCNPVIGLLPERSEWKSSADEEICKQVLLIREAMFLQGHINSYAVQGIHQGSSYKLR 300
           AKNPCNPVIGLLPERSEWKSSADEEICKQVLLIREAMFLQGHINSYAVQGIHQGSSYKLR
Sbjct: 241 AKNPCNPVIGLLPERSEWKSSADEEICKQVLLIREAMFLQGHINSYAVQGIHQGSSYKLR 300

Query: 301 KRTKSGKVFPYGMSSAQSFVLRTGNRLDQEILVTTDSWMPVYMGTSASKQIRLGPKFQVE 360
           KRTKSGKVFPYGMSSAQSFVLRTGNRLDQEILVTTDSWMPVYMGTSASKQIRLGPKFQVE
Sbjct: 301 KRTKSGKVFPYGMSSAQSFVLRTGNRLDQEILVTTDSWMPVYMGTSASKQIRLGPKFQVE 360

Query: 361 VPEWSGITSGSDSKWLGTLVWPSDNDSQAYRHEDNLVGKGREDSCKCQVRGSPKCTQYHI 420
           VPEWSGITSGSDSKWLGTLVWPSDNDSQAYRHEDNLVGKGREDSCKCQVRGSPKCTQYHI
Sbjct: 361 VPEWSGITSGSDSKWLGTLVWPSDNDSQAYRHEDNLVGKGREDSCKCQVRGSPKCTQYHI 420

Query: 421 LEKRLKVKMEIGYAFYNWKFDRMGEEVRLHWTGKEERKFKSAVRRFQNRFTPDNICSDDE 480
           LEKRLKVKMEIGYAFYNWKFDRMGEEVRLHWTGKEERKFKSAVRRFQNRFTPDNICSDDE
Sbjct: 421 LEKRLKVKMEIGYAFYNWKFDRMGEEVRLHWTGKEERKFKSAVRRFQNRFTPDNICSDDE 480

Query: 481 LESK 484
           LESK
Sbjct: 481 LESK 484

[Close]
BLAST of Cp4.1LG03g16650 vs. NCBI nr
Match: XP_023527667.1 (AT-rich interactive domain-containing protein 1-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 982 bits (2539), Expect = 0.0
Identity = 483/484 (99.79%), Postives = 483/484 (99.79%), Query Frame = 0 

Query: 1   MTLDEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL 60
           MTLDEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL
Sbjct: 1   MTLDEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL 60

Query: 61  ERFLERVVEDRDSTNSCSSNGDSTGFGLNCSPLDIQSLKKTNDLQDSNFSVCDDRIVVPK 120
           ERFLERVVEDRDSTNSCSSNGDSTGFGLNCSPLDIQSLKKTNDLQDSNFSVCDDRIVVPK
Sbjct: 61  ERFLERVVEDRDSTNSCSSNGDSTGFGLNCSPLDIQSLKKTNDLQDSNFSVCDDRIVVPK 120

Query: 121 TDTDNYTAGCGETFCQSNKSKSDIHDTSDLYEDEDFSLELASNVDENFDDIEKSHSLNIQ 180
           TDTDNYTAGCGETFCQSNKSKSDIHDTSDLYEDEDFSLELASNVDENFDDIEKSHSLNIQ
Sbjct: 121 TDTDNYTAGCGETFCQSNKSKSDIHDTSDLYEDEDFSLELASNVDENFDDIEKSHSLNIQ 180

Query: 181 KYENALVDGVESNVEFPYDCRKCDGYDSDNKQGMSVEEHNFSHEKKCESMLGMLNWIAEI 240
           KYENALVDGVESNVEFPYDCRKCDGYDSDNKQGMSVEEHNFSHEKKCESMLGMLNWIAEI
Sbjct: 181 KYENALVDGVESNVEFPYDCRKCDGYDSDNKQGMSVEEHNFSHEKKCESMLGMLNWIAEI 240

Query: 241 AKNPCNPVIGLLPERSEWKSSADEEICKQVLLIREAMFLQGHINSYAVQGIHQGSSYKLR 300
           AKNPCNPVIGLLPERSEWKSSADEEICKQVLLIREAMFLQGHINSYAVQGIHQGSSYKLR
Sbjct: 241 AKNPCNPVIGLLPERSEWKSSADEEICKQVLLIREAMFLQGHINSYAVQGIHQGSSYKLR 300

Query: 301 KRTKSGKVFPYGMSSAQSFVLRTGNRLDQEILVTTDSWMPVYMGTSASKQIRLGPKFQVE 360
           KRTKSGKVFPYGMSSAQSFVLRTGNRLDQEILVTTDSWMPVYMGTSASKQIRLGPKFQVE
Sbjct: 301 KRTKSGKVFPYGMSSAQSFVLRTGNRLDQEILVTTDSWMPVYMGTSASKQIRLGPKFQVE 360

Query: 361 VPEWSGITSGSDSKWLGTLVWPSDNDSQAYRHEDNLVGKGREDSCKCQVRGSPKCTQYHI 420
           VPEWSGITSGSDSKWLGTLVWPSDNDSQAYRHEDNLVGKGREDSCKCQVRGSPKCTQYHI
Sbjct: 361 VPEWSGITSGSDSKWLGTLVWPSDNDSQAYRHEDNLVGKGREDSCKCQVRGSPKCTQYHI 420

Query: 421 LEKRLKVKMEIGYAFYNWKFDRMGEEVRLHWTGKEERKFKSAVRRFQNRFTPDNICSDDE 480
           LEKRLKVKMEIGYAFYNWKFDRMGEEVRLHWTGKEERKFKSAVR FQNRFTPDNICSDDE
Sbjct: 421 LEKRLKVKMEIGYAFYNWKFDRMGEEVRLHWTGKEERKFKSAVR-FQNRFTPDNICSDDE 480

Query: 481 LESK 484
           LESK
Sbjct: 481 LESK 483

[Close]
BLAST of Cp4.1LG03g16650 vs. NCBI nr
Match: XP_023527662.1 (AT-rich interactive domain-containing protein 1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023527663.1 AT-rich interactive domain-containing protein 1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023527664.1 AT-rich interactive domain-containing protein 1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023527665.1 AT-rich interactive domain-containing protein 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 969 bits (2505), Expect = 0.0
Identity = 484/523 (92.54%), Postives = 484/523 (92.54%), Query Frame = 0 

Query: 1   MTLDEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL 60
           MTLDEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL
Sbjct: 1   MTLDEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL 60

Query: 61  ERFLERVVEDRDSTNSCSSNGDSTGFGLNCSPLDIQSLKKTNDLQDSNFSVCDDRIVVPK 120
           ERFLERVVEDRDSTNSCSSNGDSTGFGLNCSPLDIQSLKKTNDLQDSNFSVCDDRIVVPK
Sbjct: 61  ERFLERVVEDRDSTNSCSSNGDSTGFGLNCSPLDIQSLKKTNDLQDSNFSVCDDRIVVPK 120

Query: 121 TDTDNYTAGCGETFCQSNKSKSDIHDTSDLYEDEDFSLELASNVDENFDDIEKSHSLNIQ 180
           TDTDNYTAGCGETFCQSNKSKSDIHDTSDLYEDEDFSLELASNVDENFDDIEKSHSLNIQ
Sbjct: 121 TDTDNYTAGCGETFCQSNKSKSDIHDTSDLYEDEDFSLELASNVDENFDDIEKSHSLNIQ 180

Query: 181 KYENALVDGVESNVEFPYDCRKCDGYDSDNKQGMSVEEHNFSHEKKCESMLGMLNWIAEI 240
           KYENALVDGVESNVEFPYDCRKCDGYDSDNKQGMSVEEHNFSHEKKCESMLGMLNWIAEI
Sbjct: 181 KYENALVDGVESNVEFPYDCRKCDGYDSDNKQGMSVEEHNFSHEKKCESMLGMLNWIAEI 240

Query: 241 AKNPCNPVIGLLPERSEWKSSADEEICKQVLLIREAMFLQGHINSYAVQGIHQGSSYKLR 300
           AKNPCNPVIGLLPERSEWKSSADEEICKQVLLIREAMFLQGHINSYAVQGIHQGSSYKLR
Sbjct: 241 AKNPCNPVIGLLPERSEWKSSADEEICKQVLLIREAMFLQGHINSYAVQGIHQGSSYKLR 300

Query: 301 KRTKSGKVFPYGMSSAQSFVLRTGNRLDQEILVTTDSWMPVYMGTSASKQIRLGPKFQVE 360
           KRTKSGKVFPYGMSSAQSFVLRTGNRLDQEILVTTDSWMPVYMGTSASKQIRLGPKFQVE
Sbjct: 301 KRTKSGKVFPYGMSSAQSFVLRTGNRLDQEILVTTDSWMPVYMGTSASKQIRLGPKFQVE 360

Query: 361 VPEWSGITSGSDSKWLGTLVWPSDNDSQAYRHEDNLVGKGREDSCKCQVRGSPKCTQYHI 420
           VPEWSGITSGSDSKWLGTLVWPSDNDSQAYRHEDNLVGKGREDSCKCQVRGSPKCTQYHI
Sbjct: 361 VPEWSGITSGSDSKWLGTLVWPSDNDSQAYRHEDNLVGKGREDSCKCQVRGSPKCTQYHI 420

Query: 421 LEKRLKVKMEIGYAFYNWKFDRMGEEVRLHWTGKEERKFKSAVR---------------- 480
           LEKRLKVKMEIGYAFYNWKFDRMGEEVRLHWTGKEERKFKSAVR                
Sbjct: 421 LEKRLKVKMEIGYAFYNWKFDRMGEEVRLHWTGKEERKFKSAVRYSSESFKQSFRDHISK 480

Query: 481 -----------------------RFQNRFTPDNICSDDELESK 484
                                  RFQNRFTPDNICSDDELESK
Sbjct: 481 FFPYKSREDIVCYYFNVFILHRRRFQNRFTPDNICSDDELESK 523

[Close]
BLAST of Cp4.1LG03g16650 vs. NCBI nr
Match: XP_022924830.1 (AT-rich interactive domain-containing protein 2-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 956 bits (2472), Expect = 0.0
Identity = 469/484 (96.90%), Postives = 474/484 (97.93%), Query Frame = 0 

Query: 1   MTLDEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL 60
           MT DEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL
Sbjct: 1   MTSDEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL 60

Query: 61  ERFLERVVEDRDSTNSCSSNGDSTGFGLNCSPLDIQSLKKTNDLQDSNFSVCDDRIVVPK 120
           ERFLERVVEDRDSTN CSSNGDSTGFGLNCSPLDIQSLKK NDLQDSNFSVCDDRIVVPK
Sbjct: 61  ERFLERVVEDRDSTNCCSSNGDSTGFGLNCSPLDIQSLKKNNDLQDSNFSVCDDRIVVPK 120

Query: 121 TDTDNYTAGCGETFCQSNKSKSDIHDTSDLYEDEDFSLELASNVDENFDDIEKSHSLNIQ 180
           TD DNYTAGCGETFCQSNKSK DIHDT+DLYEDEDFSLELASNVDENFDDIEKS+SLNIQ
Sbjct: 121 TDRDNYTAGCGETFCQSNKSKPDIHDTNDLYEDEDFSLELASNVDENFDDIEKSNSLNIQ 180

Query: 181 KYENALVDGVESNVEFPYDCRKCDGYDSDNKQGMSVEEHNFSHEKKCESMLGMLNWIAEI 240
           KYENALVDGVESNVEFPYDCRKCDGYDSDNKQG+SVEEHNFSHEKKCESMLGM+NWIAEI
Sbjct: 181 KYENALVDGVESNVEFPYDCRKCDGYDSDNKQGVSVEEHNFSHEKKCESMLGMVNWIAEI 240

Query: 241 AKNPCNPVIGLLPERSEWKSSADEEICKQVLLIREAMFLQGHINSYAVQGIHQGSSYKLR 300
           AKNPCNP IGLLPERSEWKSSA+EEI KQVLLIREAMFLQGHINSYAVQGIHQGSSYKLR
Sbjct: 241 AKNPCNPAIGLLPERSEWKSSANEEIWKQVLLIREAMFLQGHINSYAVQGIHQGSSYKLR 300

Query: 301 KRTKSGKVFPYGMSSAQSFVLRTGNRLDQEILVTTDSWMPVYMGTSASKQIRLGPKFQVE 360
           KRTKSGKVFPYGMSSAQSFVL TGNRLDQEILVTTDSWMPVYMGTSASKQIRLGPKFQVE
Sbjct: 301 KRTKSGKVFPYGMSSAQSFVLGTGNRLDQEILVTTDSWMPVYMGTSASKQIRLGPKFQVE 360

Query: 361 VPEWSGITSGSDSKWLGTLVWPSDNDSQAYRHEDNLVGKGREDSCKCQVRGSPKCTQYHI 420
           VPEWSGITSGSDSKWLGTL WPSDNDSQAYRHEDNLVGKGREDSCKCQVRGSPKCTQYHI
Sbjct: 361 VPEWSGITSGSDSKWLGTLAWPSDNDSQAYRHEDNLVGKGREDSCKCQVRGSPKCTQYHI 420

Query: 421 LEKRLKVKMEIGYAFYNWKFDRMGEEVRLHWTGKEERKFKSAVRRFQNRFTPDNICSDDE 480
           LEKRLKVKMEIGYAFYNWKFDRMGEEVRL WTGKEERKFKSAVRRFQNRFTPDNICSDDE
Sbjct: 421 LEKRLKVKMEIGYAFYNWKFDRMGEEVRLRWTGKEERKFKSAVRRFQNRFTPDNICSDDE 480

Query: 481 LESK 484
           LESK
Sbjct: 481 LESK 484

[Close]
BLAST of Cp4.1LG03g16650 vs. NCBI nr
Match: XP_022924831.1 (AT-rich interactive domain-containing protein 2-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 950 bits (2456), Expect = 0.0
Identity = 468/484 (96.69%), Postives = 473/484 (97.73%), Query Frame = 0 

Query: 1   MTLDEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL 60
           MT DEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL
Sbjct: 1   MTSDEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL 60

Query: 61  ERFLERVVEDRDSTNSCSSNGDSTGFGLNCSPLDIQSLKKTNDLQDSNFSVCDDRIVVPK 120
           ERFLERVVEDRDSTN CSSNGDSTGFGLNCSPLDIQSLKK NDLQDSNFSVCDDRIVVPK
Sbjct: 61  ERFLERVVEDRDSTNCCSSNGDSTGFGLNCSPLDIQSLKKNNDLQDSNFSVCDDRIVVPK 120

Query: 121 TDTDNYTAGCGETFCQSNKSKSDIHDTSDLYEDEDFSLELASNVDENFDDIEKSHSLNIQ 180
           TD DNYTAGCGETFCQSNKSK DIHDT+DLYEDEDFSLELASNVDENFDDIEKS+SLNIQ
Sbjct: 121 TDRDNYTAGCGETFCQSNKSKPDIHDTNDLYEDEDFSLELASNVDENFDDIEKSNSLNIQ 180

Query: 181 KYENALVDGVESNVEFPYDCRKCDGYDSDNKQGMSVEEHNFSHEKKCESMLGMLNWIAEI 240
           KYENALVDGVESNVEFPYDCRKCDGYDSDNKQG+SVEEHNFSHEKKCESMLGM+NWIAEI
Sbjct: 181 KYENALVDGVESNVEFPYDCRKCDGYDSDNKQGVSVEEHNFSHEKKCESMLGMVNWIAEI 240

Query: 241 AKNPCNPVIGLLPERSEWKSSADEEICKQVLLIREAMFLQGHINSYAVQGIHQGSSYKLR 300
           AKNPCNP IGLLPERSEWKSSA+EEI KQVLLIREAMFLQGHINSYAVQGIHQGSSYKLR
Sbjct: 241 AKNPCNPAIGLLPERSEWKSSANEEIWKQVLLIREAMFLQGHINSYAVQGIHQGSSYKLR 300

Query: 301 KRTKSGKVFPYGMSSAQSFVLRTGNRLDQEILVTTDSWMPVYMGTSASKQIRLGPKFQVE 360
           KRTKSGKVFPYGMSSAQSFVL TGNRLDQEILVTTDSWMPVYMGTSASKQIRLGPKFQVE
Sbjct: 301 KRTKSGKVFPYGMSSAQSFVLGTGNRLDQEILVTTDSWMPVYMGTSASKQIRLGPKFQVE 360

Query: 361 VPEWSGITSGSDSKWLGTLVWPSDNDSQAYRHEDNLVGKGREDSCKCQVRGSPKCTQYHI 420
           VPEWSGITSGSDSKWLGTL WPSDNDSQAYRHEDNLVGKGREDSCKCQVRGSPKCTQYHI
Sbjct: 361 VPEWSGITSGSDSKWLGTLAWPSDNDSQAYRHEDNLVGKGREDSCKCQVRGSPKCTQYHI 420

Query: 421 LEKRLKVKMEIGYAFYNWKFDRMGEEVRLHWTGKEERKFKSAVRRFQNRFTPDNICSDDE 480
           LEKRLKVKMEIGYAFYNWKFDRMGEEVRL WTGKEERKFKSAVR FQNRFTPDNICSDDE
Sbjct: 421 LEKRLKVKMEIGYAFYNWKFDRMGEEVRLRWTGKEERKFKSAVR-FQNRFTPDNICSDDE 480

Query: 481 LESK 484
           LESK
Sbjct: 481 LESK 483

[Close]
BLAST of Cp4.1LG03g16650 vs. ExPASy TrEMBL
Match: A0A6J1EG64 (AT-rich interactive domain-containing protein 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111432204 PE=4 SV=1)

HSP 1 Score: 956 bits (2472), Expect = 0.0
Identity = 469/484 (96.90%), Postives = 474/484 (97.93%), Query Frame = 0 

Query: 1   MTLDEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL 60
           MT DEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL
Sbjct: 1   MTSDEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL 60

Query: 61  ERFLERVVEDRDSTNSCSSNGDSTGFGLNCSPLDIQSLKKTNDLQDSNFSVCDDRIVVPK 120
           ERFLERVVEDRDSTN CSSNGDSTGFGLNCSPLDIQSLKK NDLQDSNFSVCDDRIVVPK
Sbjct: 61  ERFLERVVEDRDSTNCCSSNGDSTGFGLNCSPLDIQSLKKNNDLQDSNFSVCDDRIVVPK 120

Query: 121 TDTDNYTAGCGETFCQSNKSKSDIHDTSDLYEDEDFSLELASNVDENFDDIEKSHSLNIQ 180
           TD DNYTAGCGETFCQSNKSK DIHDT+DLYEDEDFSLELASNVDENFDDIEKS+SLNIQ
Sbjct: 121 TDRDNYTAGCGETFCQSNKSKPDIHDTNDLYEDEDFSLELASNVDENFDDIEKSNSLNIQ 180

Query: 181 KYENALVDGVESNVEFPYDCRKCDGYDSDNKQGMSVEEHNFSHEKKCESMLGMLNWIAEI 240
           KYENALVDGVESNVEFPYDCRKCDGYDSDNKQG+SVEEHNFSHEKKCESMLGM+NWIAEI
Sbjct: 181 KYENALVDGVESNVEFPYDCRKCDGYDSDNKQGVSVEEHNFSHEKKCESMLGMVNWIAEI 240

Query: 241 AKNPCNPVIGLLPERSEWKSSADEEICKQVLLIREAMFLQGHINSYAVQGIHQGSSYKLR 300
           AKNPCNP IGLLPERSEWKSSA+EEI KQVLLIREAMFLQGHINSYAVQGIHQGSSYKLR
Sbjct: 241 AKNPCNPAIGLLPERSEWKSSANEEIWKQVLLIREAMFLQGHINSYAVQGIHQGSSYKLR 300

Query: 301 KRTKSGKVFPYGMSSAQSFVLRTGNRLDQEILVTTDSWMPVYMGTSASKQIRLGPKFQVE 360
           KRTKSGKVFPYGMSSAQSFVL TGNRLDQEILVTTDSWMPVYMGTSASKQIRLGPKFQVE
Sbjct: 301 KRTKSGKVFPYGMSSAQSFVLGTGNRLDQEILVTTDSWMPVYMGTSASKQIRLGPKFQVE 360

Query: 361 VPEWSGITSGSDSKWLGTLVWPSDNDSQAYRHEDNLVGKGREDSCKCQVRGSPKCTQYHI 420
           VPEWSGITSGSDSKWLGTL WPSDNDSQAYRHEDNLVGKGREDSCKCQVRGSPKCTQYHI
Sbjct: 361 VPEWSGITSGSDSKWLGTLAWPSDNDSQAYRHEDNLVGKGREDSCKCQVRGSPKCTQYHI 420

Query: 421 LEKRLKVKMEIGYAFYNWKFDRMGEEVRLHWTGKEERKFKSAVRRFQNRFTPDNICSDDE 480
           LEKRLKVKMEIGYAFYNWKFDRMGEEVRL WTGKEERKFKSAVRRFQNRFTPDNICSDDE
Sbjct: 421 LEKRLKVKMEIGYAFYNWKFDRMGEEVRLRWTGKEERKFKSAVRRFQNRFTPDNICSDDE 480

Query: 481 LESK 484
           LESK
Sbjct: 481 LESK 484

[Close]
BLAST of Cp4.1LG03g16650 vs. ExPASy TrEMBL
Match: A0A6J1EAJ3 (AT-rich interactive domain-containing protein 2-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111432204 PE=4 SV=1)

HSP 1 Score: 950 bits (2456), Expect = 0.0
Identity = 468/484 (96.69%), Postives = 473/484 (97.73%), Query Frame = 0 

Query: 1   MTLDEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL 60
           MT DEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL
Sbjct: 1   MTSDEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL 60

Query: 61  ERFLERVVEDRDSTNSCSSNGDSTGFGLNCSPLDIQSLKKTNDLQDSNFSVCDDRIVVPK 120
           ERFLERVVEDRDSTN CSSNGDSTGFGLNCSPLDIQSLKK NDLQDSNFSVCDDRIVVPK
Sbjct: 61  ERFLERVVEDRDSTNCCSSNGDSTGFGLNCSPLDIQSLKKNNDLQDSNFSVCDDRIVVPK 120

Query: 121 TDTDNYTAGCGETFCQSNKSKSDIHDTSDLYEDEDFSLELASNVDENFDDIEKSHSLNIQ 180
           TD DNYTAGCGETFCQSNKSK DIHDT+DLYEDEDFSLELASNVDENFDDIEKS+SLNIQ
Sbjct: 121 TDRDNYTAGCGETFCQSNKSKPDIHDTNDLYEDEDFSLELASNVDENFDDIEKSNSLNIQ 180

Query: 181 KYENALVDGVESNVEFPYDCRKCDGYDSDNKQGMSVEEHNFSHEKKCESMLGMLNWIAEI 240
           KYENALVDGVESNVEFPYDCRKCDGYDSDNKQG+SVEEHNFSHEKKCESMLGM+NWIAEI
Sbjct: 181 KYENALVDGVESNVEFPYDCRKCDGYDSDNKQGVSVEEHNFSHEKKCESMLGMVNWIAEI 240

Query: 241 AKNPCNPVIGLLPERSEWKSSADEEICKQVLLIREAMFLQGHINSYAVQGIHQGSSYKLR 300
           AKNPCNP IGLLPERSEWKSSA+EEI KQVLLIREAMFLQGHINSYAVQGIHQGSSYKLR
Sbjct: 241 AKNPCNPAIGLLPERSEWKSSANEEIWKQVLLIREAMFLQGHINSYAVQGIHQGSSYKLR 300

Query: 301 KRTKSGKVFPYGMSSAQSFVLRTGNRLDQEILVTTDSWMPVYMGTSASKQIRLGPKFQVE 360
           KRTKSGKVFPYGMSSAQSFVL TGNRLDQEILVTTDSWMPVYMGTSASKQIRLGPKFQVE
Sbjct: 301 KRTKSGKVFPYGMSSAQSFVLGTGNRLDQEILVTTDSWMPVYMGTSASKQIRLGPKFQVE 360

Query: 361 VPEWSGITSGSDSKWLGTLVWPSDNDSQAYRHEDNLVGKGREDSCKCQVRGSPKCTQYHI 420
           VPEWSGITSGSDSKWLGTL WPSDNDSQAYRHEDNLVGKGREDSCKCQVRGSPKCTQYHI
Sbjct: 361 VPEWSGITSGSDSKWLGTLAWPSDNDSQAYRHEDNLVGKGREDSCKCQVRGSPKCTQYHI 420

Query: 421 LEKRLKVKMEIGYAFYNWKFDRMGEEVRLHWTGKEERKFKSAVRRFQNRFTPDNICSDDE 480
           LEKRLKVKMEIGYAFYNWKFDRMGEEVRL WTGKEERKFKSAVR FQNRFTPDNICSDDE
Sbjct: 421 LEKRLKVKMEIGYAFYNWKFDRMGEEVRLRWTGKEERKFKSAVR-FQNRFTPDNICSDDE 480

Query: 481 LESK 484
           LESK
Sbjct: 481 LESK 483

[Close]
BLAST of Cp4.1LG03g16650 vs. ExPASy TrEMBL
Match: A0A6J1J0E9 (AT-rich interactive domain-containing protein 2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480131 PE=4 SV=1)

HSP 1 Score: 939 bits (2428), Expect = 0.0
Identity = 462/484 (95.45%), Postives = 470/484 (97.11%), Query Frame = 0 

Query: 1   MTLDEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL 60
           MT DEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL
Sbjct: 1   MTSDEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL 60

Query: 61  ERFLERVVEDRDSTNSCSSNGDSTGFGLNCSPLDIQSLKKTNDLQDSNFSVCDDRIVVPK 120
           ERFLERVVEDRDSTNSCSSNGDSTGFGLNC PL IQSLKK NDLQDSNFSVCDDRIVVPK
Sbjct: 61  ERFLERVVEDRDSTNSCSSNGDSTGFGLNCLPLYIQSLKKNNDLQDSNFSVCDDRIVVPK 120

Query: 121 TDTDNYTAGCGETFCQSNKSKSDIHDTSDLYEDEDFSLELASNVDENFDDIEKSHSLNIQ 180
           TD DN+TAGCGETFCQSNKSK DIHDTSDLYEDEDFSLELASNVDENFDDIEKSHSLNIQ
Sbjct: 121 TDRDNHTAGCGETFCQSNKSKPDIHDTSDLYEDEDFSLELASNVDENFDDIEKSHSLNIQ 180

Query: 181 KYENALVDGVESNVEFPYDCRKCDGYDSDNKQGMSVEEHNFSHEKKCESMLGMLNWIAEI 240
           KYENALVDGVESNVEFPYDCRKCDGYDSDNKQG+SVEEHNFSHEKKCESMLGM+NWIAEI
Sbjct: 181 KYENALVDGVESNVEFPYDCRKCDGYDSDNKQGVSVEEHNFSHEKKCESMLGMVNWIAEI 240

Query: 241 AKNPCNPVIGLLPERSEWKSSADEEICKQVLLIREAMFLQGHINSYAVQGIHQGSSYKLR 300
           AKNPCNPVIGLLPERSEWKSSA+EEI KQVLLIREAMFL+GHINSYAVQ IH GS YKLR
Sbjct: 241 AKNPCNPVIGLLPERSEWKSSANEEIWKQVLLIREAMFLEGHINSYAVQDIHGGSCYKLR 300

Query: 301 KRTKSGKVFPYGMSSAQSFVLRTGNRLDQEILVTTDSWMPVYMGTSASKQIRLGPKFQVE 360
           KRTKSGKVFPYGMSSAQ+ VL TGNRLDQEILVTTDSWMPVYMGTSASKQIRLGPKFQVE
Sbjct: 301 KRTKSGKVFPYGMSSAQNLVLGTGNRLDQEILVTTDSWMPVYMGTSASKQIRLGPKFQVE 360

Query: 361 VPEWSGITSGSDSKWLGTLVWPSDNDSQAYRHEDNLVGKGREDSCKCQVRGSPKCTQYHI 420
           VPEWSGITSGSDSKWLGTLVWPSDNDSQAYRH+DNLVGKGREDSCKCQVRGSPKCTQYHI
Sbjct: 361 VPEWSGITSGSDSKWLGTLVWPSDNDSQAYRHKDNLVGKGREDSCKCQVRGSPKCTQYHI 420

Query: 421 LEKRLKVKMEIGYAFYNWKFDRMGEEVRLHWTGKEERKFKSAVRRFQNRFTPDNICSDDE 480
           LEKRLKVKMEIGYAFYNWKFDRMGEEVRL WTGKEE KFKSAVRRFQNRFTP+NICSDDE
Sbjct: 421 LEKRLKVKMEIGYAFYNWKFDRMGEEVRLCWTGKEEHKFKSAVRRFQNRFTPENICSDDE 480

Query: 481 LESK 484
           LESK
Sbjct: 481 LESK 484

[Close]
BLAST of Cp4.1LG03g16650 vs. ExPASy TrEMBL
Match: A0A6J1EAB1 (AT-rich interactive domain-containing protein 2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432204 PE=4 SV=1)

HSP 1 Score: 937 bits (2422), Expect = 0.0
Identity = 469/523 (89.67%), Postives = 474/523 (90.63%), Query Frame = 0 

Query: 1   MTLDEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL 60
           MT DEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL
Sbjct: 1   MTSDEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL 60

Query: 61  ERFLERVVEDRDSTNSCSSNGDSTGFGLNCSPLDIQSLKKTNDLQDSNFSVCDDRIVVPK 120
           ERFLERVVEDRDSTN CSSNGDSTGFGLNCSPLDIQSLKK NDLQDSNFSVCDDRIVVPK
Sbjct: 61  ERFLERVVEDRDSTNCCSSNGDSTGFGLNCSPLDIQSLKKNNDLQDSNFSVCDDRIVVPK 120

Query: 121 TDTDNYTAGCGETFCQSNKSKSDIHDTSDLYEDEDFSLELASNVDENFDDIEKSHSLNIQ 180
           TD DNYTAGCGETFCQSNKSK DIHDT+DLYEDEDFSLELASNVDENFDDIEKS+SLNIQ
Sbjct: 121 TDRDNYTAGCGETFCQSNKSKPDIHDTNDLYEDEDFSLELASNVDENFDDIEKSNSLNIQ 180

Query: 181 KYENALVDGVESNVEFPYDCRKCDGYDSDNKQGMSVEEHNFSHEKKCESMLGMLNWIAEI 240
           KYENALVDGVESNVEFPYDCRKCDGYDSDNKQG+SVEEHNFSHEKKCESMLGM+NWIAEI
Sbjct: 181 KYENALVDGVESNVEFPYDCRKCDGYDSDNKQGVSVEEHNFSHEKKCESMLGMVNWIAEI 240

Query: 241 AKNPCNPVIGLLPERSEWKSSADEEICKQVLLIREAMFLQGHINSYAVQGIHQGSSYKLR 300
           AKNPCNP IGLLPERSEWKSSA+EEI KQVLLIREAMFLQGHINSYAVQGIHQGSSYKLR
Sbjct: 241 AKNPCNPAIGLLPERSEWKSSANEEIWKQVLLIREAMFLQGHINSYAVQGIHQGSSYKLR 300

Query: 301 KRTKSGKVFPYGMSSAQSFVLRTGNRLDQEILVTTDSWMPVYMGTSASKQIRLGPKFQVE 360
           KRTKSGKVFPYGMSSAQSFVL TGNRLDQEILVTTDSWMPVYMGTSASKQIRLGPKFQVE
Sbjct: 301 KRTKSGKVFPYGMSSAQSFVLGTGNRLDQEILVTTDSWMPVYMGTSASKQIRLGPKFQVE 360

Query: 361 VPEWSGITSGSDSKWLGTLVWPSDNDSQAYRHEDNLVGKGREDSCKCQVRGSPKCTQYHI 420
           VPEWSGITSGSDSKWLGTL WPSDNDSQAYRHEDNLVGKGREDSCKCQVRGSPKCTQYHI
Sbjct: 361 VPEWSGITSGSDSKWLGTLAWPSDNDSQAYRHEDNLVGKGREDSCKCQVRGSPKCTQYHI 420

Query: 421 LEKRLKVKMEIGYAFYNWKFDRMGEEVRLHWTGKEERKFKSAVR---------------- 480
           LEKRLKVKMEIGYAFYNWKFDRMGEEVRL WTGKEERKFKSAVR                
Sbjct: 421 LEKRLKVKMEIGYAFYNWKFDRMGEEVRLRWTGKEERKFKSAVRCSSESFKQSFRNHISK 480

Query: 481 -----------------------RFQNRFTPDNICSDDELESK 484
                                  RFQNRFTPDNICSDDELESK
Sbjct: 481 FFPYKSREDIVCYYFNVFILHRRRFQNRFTPDNICSDDELESK 523

[Close]
BLAST of Cp4.1LG03g16650 vs. ExPASy TrEMBL
Match: A0A6J1IXS7 (AT-rich interactive domain-containing protein 2-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111480131 PE=4 SV=1)

HSP 1 Score: 933 bits (2412), Expect = 0.0
Identity = 461/484 (95.25%), Postives = 469/484 (96.90%), Query Frame = 0 

Query: 1   MTLDEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL 60
           MT DEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL
Sbjct: 1   MTSDEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL 60

Query: 61  ERFLERVVEDRDSTNSCSSNGDSTGFGLNCSPLDIQSLKKTNDLQDSNFSVCDDRIVVPK 120
           ERFLERVVEDRDSTNSCSSNGDSTGFGLNC PL IQSLKK NDLQDSNFSVCDDRIVVPK
Sbjct: 61  ERFLERVVEDRDSTNSCSSNGDSTGFGLNCLPLYIQSLKKNNDLQDSNFSVCDDRIVVPK 120

Query: 121 TDTDNYTAGCGETFCQSNKSKSDIHDTSDLYEDEDFSLELASNVDENFDDIEKSHSLNIQ 180
           TD DN+TAGCGETFCQSNKSK DIHDTSDLYEDEDFSLELASNVDENFDDIEKSHSLNIQ
Sbjct: 121 TDRDNHTAGCGETFCQSNKSKPDIHDTSDLYEDEDFSLELASNVDENFDDIEKSHSLNIQ 180

Query: 181 KYENALVDGVESNVEFPYDCRKCDGYDSDNKQGMSVEEHNFSHEKKCESMLGMLNWIAEI 240
           KYENALVDGVESNVEFPYDCRKCDGYDSDNKQG+SVEEHNFSHEKKCESMLGM+NWIAEI
Sbjct: 181 KYENALVDGVESNVEFPYDCRKCDGYDSDNKQGVSVEEHNFSHEKKCESMLGMVNWIAEI 240

Query: 241 AKNPCNPVIGLLPERSEWKSSADEEICKQVLLIREAMFLQGHINSYAVQGIHQGSSYKLR 300
           AKNPCNPVIGLLPERSEWKSSA+EEI KQVLLIREAMFL+GHINSYAVQ IH GS YKLR
Sbjct: 241 AKNPCNPVIGLLPERSEWKSSANEEIWKQVLLIREAMFLEGHINSYAVQDIHGGSCYKLR 300

Query: 301 KRTKSGKVFPYGMSSAQSFVLRTGNRLDQEILVTTDSWMPVYMGTSASKQIRLGPKFQVE 360
           KRTKSGKVFPYGMSSAQ+ VL TGNRLDQEILVTTDSWMPVYMGTSASKQIRLGPKFQVE
Sbjct: 301 KRTKSGKVFPYGMSSAQNLVLGTGNRLDQEILVTTDSWMPVYMGTSASKQIRLGPKFQVE 360

Query: 361 VPEWSGITSGSDSKWLGTLVWPSDNDSQAYRHEDNLVGKGREDSCKCQVRGSPKCTQYHI 420
           VPEWSGITSGSDSKWLGTLVWPSDNDSQAYRH+DNLVGKGREDSCKCQVRGSPKCTQYHI
Sbjct: 361 VPEWSGITSGSDSKWLGTLVWPSDNDSQAYRHKDNLVGKGREDSCKCQVRGSPKCTQYHI 420

Query: 421 LEKRLKVKMEIGYAFYNWKFDRMGEEVRLHWTGKEERKFKSAVRRFQNRFTPDNICSDDE 480
           LEKRLKVKMEIGYAFYNWKFDRMGEEVRL WTGKEE KFKSAVR FQNRFTP+NICSDDE
Sbjct: 421 LEKRLKVKMEIGYAFYNWKFDRMGEEVRLCWTGKEEHKFKSAVR-FQNRFTPENICSDDE 480

Query: 481 LESK 484
           LESK
Sbjct: 481 LESK 483

[Close]
BLAST of Cp4.1LG03g16650 vs. TAIR 10
Match: AT2G46040.1 (ARID/BRIGHT DNA-binding domain;ELM2 domain protein )

HSP 1 Score: 186.0 bits (471), Expect = 7.0e-47
Identity = 147/476 (30.88%), Postives = 218/476 (45.80%), Query Frame = 0 

Query: 1   MTLDEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVL 60
           MT + +  DLF LF+ V  KGG++ VS    WD V +ESGL S  S++ K++YV+YL+  
Sbjct: 72  MTGEGRTVDLFNLFLNVTHKGGFDAVSENGSWDEVVQESGLESYDSASAKLIYVKYLDAF 131

Query: 61  ERFLERVVEDRDSTNSCSSNGDSTGFGLNCSPLDIQSLKKTNDLQDSNFSVCDDRIVVPK 120
            R+L RVV      +S   +G S       +   +  +KK  +L+             P 
Sbjct: 132 GRWLNRVVAGDTDVSSVELSGISDALVARLNGF-LSEVKKKYELRKGR----------PA 191

Query: 121 TDTDNYTAGCGETFCQSNKSKSDIHDTSDLYEDEDFSLELASNVDENFDDIEKSHSLNIQ 180
            +                + K  I  T   Y+      E ASN     D +++     + 
Sbjct: 192 KEL-------------GAELKWFISKTKRRYDKHHVGKESASN-----DAVKEFQGSKLA 251

Query: 181 KYENALVDGVESNVEFPYDCRKCDGYDSDNKQGMSVEEHNFSHEKKCESMLGMLNWIAEI 240
           +     +  +ES                        +E +   ++K E  L  L W++++
Sbjct: 252 ERRLEQIMILES----------------------VTQECSSPGKRKRECPLETLKWLSDV 311

Query: 241 AKNPCNPVIGLLPERSEWKSSADEEICKQVLLIREAMFLQGHI---NSYAVQGIH----- 300
           AK+PC+P +G++P+RSEW S   EE  KQ+LL R +              VQ +H     
Sbjct: 312 AKDPCDPSLGIVPDRSEWVSYGSEEPWKQLLLFRASRTNNDSACEKTWQKVQKMHPCLYD 371

Query: 301 --QGSSYKLRKRTKSGKVFPYGMSSAQSFVLRTGNRLDQEILVTTDSWMPVYMGTSASKQ 360
              G+SY LR+R  S + +  G         +TGN  D              +G+S  + 
Sbjct: 372 DSAGASYNLRERL-SYEDYKRG---------KTGNGSD--------------IGSSDEED 431

Query: 361 ---IRLGPKFQVEVPEWSGITSGSDSKWLGTLVWP--SDNDSQAYRHEDNLVGKGREDSC 420
                +G KFQ +VPEW+GIT  SDSKWLGT +WP   +        E + +GKGR+D C
Sbjct: 432 RPCALVGSKFQAKVPEWTGITPESDSKWLGTRIWPLTKEQTKANLLIERDRIGKGRQDPC 472

Query: 421 KCQVRGSPKCTQYHILEKRLKVKMEIGYAFYNWKFDRMGEEVRLHWTGKEERKFKS 462
            C   GS +C ++HI  KR K+K+E+G AFY W FD MGE    +WT  E +K KS
Sbjct: 492 GCHNPGSIECVKFHITAKRDKLKLELGPAFYMWCFDVMGECTLQYWTDLELKKIKS 472

[Close]
BLAST of Cp4.1LG03g16650 vs. TAIR 10
Match: AT4G11400.1 (ARID/BRIGHT DNA-binding domain;ELM2 domain protein )

HSP 1 Score: 183.3 bits (464), Expect = 4.5e-46
Identity = 159/558 (28.49%), Postives = 251/558 (44.98%), Query Frame = 0 

Query: 4   DEQNFDLFKLFVAVRDKGGYNVVSRKDLWDLVAEESGLGSIISSTVKVLYVEYLNVLERF 63
           D +N DLFKLFV VR++ G++ VSRK LW++VAE+ G    +  ++ ++Y++YLN +E++
Sbjct: 53  DGKNVDLFKLFVLVREREGFDTVSRKRLWEVVAEKLGFDCSLVPSLILIYLKYLNRMEKW 112

Query: 64  LERVVEDRDSTNSCSSNGDSTGFGLNCSPL-----DIQSLKKTNDLQDSNFSVCDDRIVV 123
               VE+    N    N DS   G     L       +SL      Q  N +V       
Sbjct: 113 ---AVEESRIVN--WDNKDSEKKGCYSGMLHELGNGFKSLLDNGKCQKRNRAV------- 172

Query: 124 PKTDTDNYTAGCG---ETFCQSNKSKSDIHDTSDLYEDEDFSLELASNVDENFDDIEKSH 183
                     GC    E+  + ++S+    ++    +D+D  + L+S V           
Sbjct: 173 --------AFGCNHMEESCSEFDRSRKRFRES----DDDDKGVGLSSVVIR--------- 232

Query: 184 SLNIQKYENALVDGVESNVEFPYDCRKCDGYDSDNKQGMSVEEHNFSHEKKCESMLGMLN 243
                  E  +V  VE                    +G+S    +FS EK+ + + GML 
Sbjct: 233 -------EETVVCAVE--------------------EGLS----DFSLEKR-DDLPGMLK 292

Query: 244 WIAEIAKNPCNPVIGLLPERSEWKSSADEEICKQVLLIREAMFLQ--------------G 303
           W+A +A +P +P IG++P  S+WK     +   QV   + ++ +Q              G
Sbjct: 293 WLALVATSPHDPAIGVIPHSSKWKQYNGNKCWLQVARAKNSLLVQRDNAELRYRYHPFRG 352

Query: 304 HINSYAVQGIHQGSSY--------KLRKRTKSGKVFPYGMSS---AQSFVLRTGNRLD-- 363
           H      Q IH  S Y        +LR   +   +  +  SS     S V  + +R    
Sbjct: 353 H------QNIHHPSMYEDDRKSIGRLRYSIRPPNLSKHCSSSCCNGSSLVSLSKSRSTKC 412

Query: 364 QEILVTTDSWMPVYMGTSASKQ----------IRLGPKFQVEVPEWSGITSGSDSKWLGT 423
           +++ +       +  GTS +++          I++G + Q +V EW+     SDSKWLGT
Sbjct: 413 RKLTIIASERAGLTAGTSRARKRNKAEIPRRCIKVGHQHQAQVDEWTESGVDSDSKWLGT 472

Query: 424 LVWPSDNDSQAYRHEDN-LVGKGREDSCKCQVRGSPKCTQYHILEKRLKVKMEIGYAFYN 481
            +WP +N     +   N LVGKGR DSC C++ G  +CT+ HI EKR+++K E+G  F++
Sbjct: 473 RIWPPENSEALDQTLGNDLVGKGRPDSCSCELSGFVECTRLHIAEKRMELKRELGDDFFH 532

[Close]
BLAST of Cp4.1LG03g16650 vs. TAIR 10
Match: AT1G26580.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: ELM2 domain-containing protein (TAIR:AT2G03470.1); Has 161 Blast hits to 161 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 4; Plants - 156; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 2.6e-09
Identity = 49/198 (24.75%), Postives = 80/198 (40.40%), Query Frame = 0 

Query: 284 NSYAVQGIHQGSSYKLRKRTKSGKVFPYGMSSAQSFVLRTGNRLDQEILVTTDSWMPVYM 343
           ++Y   G     ++    +   G+   Y   S + F L     +   +    +++  + +
Sbjct: 72  SNYVYPGHDMDDTFTWDTQGCGGRDATYSPHSGKYFEL----DIPPRVFAPVETFYYLLL 131

Query: 344 GTSASKQIRLGPKFQVEVPEWSGITSGS-----------------DSKWLGTLVWPSDND 403
              A KQ+ +GP  Q E+PEW G  +G+                   K  GT V P    
Sbjct: 132 DQRAKKQVPIGPGHQAEIPEWEGSQTGNIETSGMSVQNHISGCADGEKLFGTSVIPMPG- 191

Query: 404 SQAYRHEDNLVGKGREDSCKCQVRGSPKCTQYHILEKRLKVKMEIG-YAFYNWKFDRMGE 463
                H D++VGKGR+  C C+ R S +C   HI E R ++    G   F       MGE
Sbjct: 192 LTTVAHIDDIVGKGRK-FCVCRDRDSVRCVCQHIKEAREELVKTFGNETFKELGLCEMGE 251

[Close]
BLAST of Cp4.1LG03g16650 vs. TAIR 10
Match: AT1G13880.1 (ELM2 domain-containing protein )

HSP 1 Score: 47.8 bits (112), Expect = 3.0e-05
Identity = 43/137 (31.39%), Postives = 63/137 (45.99%), Query Frame = 0 

Query: 338 WMPVYMGTSASKQIRLGPKFQVEVPE--------WSGITSGSDSKWL-GTLVWP-SDNDS 397
           W P+    S  K + +G  +Q ++PE         SG   G D + + G  V P  D ++
Sbjct: 119 WCPI----SPRKTVPIGSDYQADIPECVKEEANDQSGQGVGYDEEQVTGKCVIPMPDCET 178

Query: 398 QAYRHEDNLVGKGREDSCKCQVRGSPKCTQYHILEKRLKVKMEIGY-AFYNWKFDRMGEE 457
           +  +     +GKGR++ C C  +GS +C Q HI+E R  +   IGY    +     MGEE
Sbjct: 179 EVCK-----IGKGRKE-CICLDKGSIRCVQQHIMENREDLFATIGYDRCLDIGLCEMGEE 238

Query: 458 VRLHWTGKEERKFKSAV 464
           V    T  EE  F   V
Sbjct: 239 VAARLTEDEEDLFHEIV 245

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g16650 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q84JT79.8e-4630.88AT-rich interactive domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 ... [more]
Q9LDD46.4e-4528.49AT-rich interactive domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of Cp4.1LG03g16650 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023527666.10.0100.00AT-rich interactive domain-containing protein 1-like isoform X2 [Cucurbita pepo ... [more]
XP_023527667.10.099.79AT-rich interactive domain-containing protein 1-like isoform X3 [Cucurbita pepo ... [more]
XP_023527662.10.092.54AT-rich interactive domain-containing protein 1-like isoform X1 [Cucurbita pepo ... [more]
XP_022924830.10.096.90AT-rich interactive domain-containing protein 2-like isoform X2 [Cucurbita mosch... [more]
XP_022924831.10.096.69AT-rich interactive domain-containing protein 2-like isoform X3 [Cucurbita mosch... [more]
BLAST of Cp4.1LG03g16650 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EG640.096.90AT-rich interactive domain-containing protein 2-like isoform X2 OS=Cucurbita mos... [more]
A0A6J1EAJ30.096.69AT-rich interactive domain-containing protein 2-like isoform X3 OS=Cucurbita mos... [more]
A0A6J1J0E90.095.45AT-rich interactive domain-containing protein 2-like isoform X2 OS=Cucurbita max... [more]
A0A6J1EAB10.089.67AT-rich interactive domain-containing protein 2-like isoform X1 OS=Cucurbita mos... [more]
A0A6J1IXS70.095.25AT-rich interactive domain-containing protein 2-like isoform X3 OS=Cucurbita max... [more]
BLAST of Cp4.1LG03g16650 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G46040.17.0e-4730.88ARID/BRIGHT DNA-binding domain;ELM2 domain protein [more]
AT4G11400.14.5e-4628.49ARID/BRIGHT DNA-binding domain;ELM2 domain protein [more]
AT1G26580.12.6e-0924.75FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT1G13880.13.0e-0531.39ELM2 domain-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001606ARID DNA-binding domainSMARTSM00501bright_3coord: 1..66
e-value: 0.0048
score: 12.2
IPR001606ARID DNA-binding domainPFAMPF01388ARIDcoord: 3..58
e-value: 2.5E-7
score: 31.3
IPR001606ARID DNA-binding domainPROSITEPS51011ARIDcoord: 1..65
score: 16.745289
IPR000949ELM2 domainSMARTSM01189ELM2_2coord: 351..404
e-value: 0.0019
score: 27.4
IPR000949ELM2 domainPROSITEPS51156ELM2coord: 349..484
score: 10.886315
IPR036431ARID DNA-binding domain superfamilyGENE3D1.10.150.60coord: 1..77
e-value: 5.9E-12
score: 47.1
IPR036431ARID DNA-binding domain superfamilySUPERFAMILY46774ARID-likecoord: 3..67
NoneNo IPR availablePANTHERPTHR46410AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2coord: 1..464
NoneNo IPR availablePANTHERPTHR46410:SF1AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1coord: 1..464
NoneNo IPR availableCDDcd16100ARIDcoord: 2..61
e-value: 2.40678E-11
score: 57.7528

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g16650.1Cp4.1LG03g16650.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding