Cp4.1LG03g15990 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG03g15990
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Auxin-responsive family protein
Location	Cp4.1LG03: 13552868 .. 13553194 (+)
RNA-Seq Expression	Cp4.1LG03g15990
Synteny	Cp4.1LG03g15990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCGGTGGAGAGAGACGACGCCAGCACTCCGCCGCCGCCGCCGTCCCCAAAGGCTGCTTGGCGGTCCGAGTGGGCCAGAAGGAGGAAGAGCAGCAGAGATTTGTGGTCCCGGTTATGTACTTCAATCACCCGCGCTTCATGCAACTTCTCAAAGAGGCGGAGGAGGAGTACGGATTCGATCAGAAGGGGACCATCGCCATTCCTTGCCACGTCGAGGAGTTCCGCCACGTCCAGGGCATGATTGACCGTGAAAATTCATTCCACCGCCGTCACCACCACCACCACCACCACCACCACGTCGGTTGCTTTCGGGTTTCATTCTGA

mRNA sequence

ATGCCCGGTGGAGAGAGACGACGCCAGCACTCCGCCGCCGCCGCCGTCCCCAAAGGCTGCTTGGCGGTCCGAGTGGGCCAGAAGGAGGAAGAGCAGCAGAGATTTGTGGTCCCGGTTATGTACTTCAATCACCCGCGCTTCATGCAACTTCTCAAAGAGGCGGAGGAGGAGTACGGATTCGATCAGAAGGGGACCATCGCCATTCCTTGCCACGTCGAGGAGTTCCGCCACGTCCAGGGCATGATTGACCGTGAAAATTCATTCCACCGCCGTCACCACCACCACCACCACCACCACCACGTCGGTTGCTTTCGGGTTTCATTCTGA

Coding sequence (CDS)

ATGCCCGGTGGAGAGAGACGACGCCAGCACTCCGCCGCCGCCGCCGTCCCCAAAGGCTGCTTGGCGGTCCGAGTGGGCCAGAAGGAGGAAGAGCAGCAGAGATTTGTGGTCCCGGTTATGTACTTCAATCACCCGCGCTTCATGCAACTTCTCAAAGAGGCGGAGGAGGAGTACGGATTCGATCAGAAGGGGACCATCGCCATTCCTTGCCACGTCGAGGAGTTCCGCCACGTCCAGGGCATGATTGACCGTGAAAATTCATTCCACCGCCGTCACCACCACCACCACCACCACCACCACGTCGGTTGCTTTCGGGTTTCATTCTGA

Protein sequence

MPGGERRRQHSAAAAVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHHHHHHHHVGCFRVSF

Homology

[Close]

BLAST of Cp4.1LG03g15990 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.1e-32
Identity = 69/106 (65.09%), Postives = 82/106 (77.36%), Query Frame = 0


Query: 7   RRQHSAAAAVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTI 66
           R+Q      VPKGCLA++VG + EEQQRF+VPV+YFNHP FMQLLKEAE+EYGFDQKGTI
Sbjct: 15  RKQSVKVKDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTI 74

Query: 67  AIPCHVEEFRHVQGMIDRENSFHRRHHHHH-------HHHHVGCFR 106
            IPCHVEEFR+VQ +ID E S +  ++HHH       +HH VGCFR
Sbjct: 75  TIPCHVEEFRYVQALIDGERSVYNGNNHHHRHGGRDQYHHLVGCFR 120

[Close]

BLAST of Cp4.1LG03g15990 vs. ExPASy Swiss-Prot
Match: O22150 (Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana OX=3702 GN=SAUR36 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.2e-14
Identity = 37/73 (50.68%), Postives = 50/73 (68.49%), Query Frame = 0


Query: 10  HSAAAAVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIP 69
           H  A  VP+G LA+ VGQK+ +  R +VP++YFNHP F +LL+EAE+EYGF  +G I IP
Sbjct: 73  HKKADPVPRGHLAIYVGQKDGDCHRVLVPIVYFNHPLFGELLREAEKEYGFCHEGGITIP 132

Query: 70  CHVEEFRHVQGMI 83
           C   +F  V+  I
Sbjct: 133 CLYSDFERVKTRI 145

[Close]

BLAST of Cp4.1LG03g15990 vs. ExPASy Swiss-Prot
Match: Q41220 (Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana OX=3702 GN=SAUR15 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 5.1e-11
Identity = 31/71 (43.66%), Postives = 48/71 (67.61%), Query Frame = 0


Query: 13 AAAVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ-KGTIAIPCH 72
          +++ P+G +AV VG+ +++++R+VVPV Y N P F QLL ++EEE+G+D   G + IPCH
Sbjct: 18 SSSTPRGFMAVYVGENDQKKKRYVVPVSYLNQPLFQQLLSKSEEEFGYDHPMGGLTIPCH 77

Query: 73 VEEFRHVQGMI 83
             F  V   I
Sbjct: 78 ESLFFTVTSQI 88

[Close]

BLAST of Cp4.1LG03g15990 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.5e-10
Identity = 35/78 (44.87%), Postives = 49/78 (62.82%), Query Frame = 0


Query: 8  RQHSAAAAVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ-KGTI 67
          R  +AA+A PKG LAV VG  E +++R++VP+ Y N P F  LL ++EEE+GFD   G +
Sbjct: 16 RSTTAASAAPKGFLAVYVG--ESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMGGL 75

Query: 68 AIPCHVEEFRHVQGMIDR 85
           IPC  + F +V     R
Sbjct: 76 TIPCPEDTFINVTSRFQR 91

[Close]

BLAST of Cp4.1LG03g15990 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.5e-10
Identity = 33/72 (45.83%), Postives = 48/72 (66.67%), Query Frame = 0


Query: 8  RQHSAAAAVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ-KGTI 67
          R  +A +A PKG LAV VG  E +++R++VP+ Y N P F  LL ++E+E+GFD   G +
Sbjct: 16 RSTAAVSAAPKGFLAVYVG--ESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGL 75

Query: 68 AIPCHVEEFRHV 79
           IPCH + F +V
Sbjct: 76 TIPCHEDTFINV 85

[Close]

BLAST of Cp4.1LG03g15990 vs. NCBI nr
Match: XP_023526937.1 (auxin-responsive protein SAUR32-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 227 bits (579), Expect = 3.80e-75
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MPGGERRRQHSAAAAVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGF 60
           MPGGERRRQHSAAAAVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGF
Sbjct: 1   MPGGERRRQHSAAAAVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGF 60

Query: 61  DQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHHHHHHHHVGCFRVSF 108
           DQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHHHHHHHHVGCFRVSF
Sbjct: 61  DQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHHHHHHHHVGCFRVSF 108

[Close]

BLAST of Cp4.1LG03g15990 vs. NCBI nr
Match: XP_022979593.1 (auxin-responsive protein SAUR32-like [Cucurbita maxima])

HSP 1 Score: 204 bits (520), Expect = 3.35e-66
Identity = 101/108 (93.52%), Postives = 102/108 (94.44%), Query Frame = 0


Query: 1   MPGGERRRQHSAAAAVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGF 60
           MPGG+RRR HS AA VPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGF
Sbjct: 1   MPGGDRRRLHSGAA-VPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGF 60

Query: 61  DQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHHHHHHHHVGCFRVSF 108
           DQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHHHHH   VGCFRVSF
Sbjct: 61  DQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHHHHH---VGCFRVSF 104

[Close]

BLAST of Cp4.1LG03g15990 vs. NCBI nr
Match: XP_022924405.1 (auxin-responsive protein SAUR32-like [Cucurbita moschata] >KAG6582694.1 Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019092.1 Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 201 bits (511), Expect = 7.67e-65
Identity = 100/108 (92.59%), Postives = 100/108 (92.59%), Query Frame = 0


Query: 1   MPGGERRRQHSAAAAVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGF 60
           M GGERRRQHS A  VPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGF
Sbjct: 1   MGGGERRRQHSGAG-VPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGF 60

Query: 61  DQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHHHHHHHHVGCFRVSF 108
           DQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHHHH    VGCFRVSF
Sbjct: 61  DQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHHHH----VGCFRVSF 103

[Close]

BLAST of Cp4.1LG03g15990 vs. NCBI nr
Match: XP_038900878.1 (auxin-responsive protein SAUR32-like [Benincasa hispida])

HSP 1 Score: 199 bits (507), Expect = 3.23e-64
Identity = 100/108 (92.59%), Postives = 101/108 (93.52%), Query Frame = 0


Query: 1   MPGGERRRQHSAAAAVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGF 60
           M GGERRRQ SAA  VPKGCLAVRVGQK EEQQRFVVPVMYFNHPRFMQLLKEAEEEYGF
Sbjct: 1   MGGGERRRQSSAA--VPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGF 60

Query: 61  DQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHHHHHHHHVGCFRVSF 108
           DQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHHHHHH  +GCFRVSF
Sbjct: 61  DQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHHHHHH--LGCFRVSF 104

[Close]

BLAST of Cp4.1LG03g15990 vs. NCBI nr
Match: KAA0048857.1 (auxin-responsive family protein [Cucumis melo var. makuwa] >TYK20809.1 auxin-responsive family protein [Cucumis melo var. makuwa])

HSP 1 Score: 199 bits (505), Expect = 7.40e-64
Identity = 99/110 (90.00%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 1   MPGGERRRQHSAAAAVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGF 60
           M GGERRRQ  + AAVPKGCLAV+VGQK EEQQRFVVPVMYFNHPRFMQLLKEAEEEYGF
Sbjct: 1   MGGGERRRQ--SGAAVPKGCLAVKVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGF 60

Query: 61  DQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHHHHHHH--HVGCFRVSF 108
           DQKGTIAIPCHVEEFRHVQGMIDRENSFHRRH+HHHHHH  H+GCFRVSF
Sbjct: 61  DQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHNHHHHHHSHHLGCFRVSF 108

[Close]

BLAST of Cp4.1LG03g15990 vs. ExPASy TrEMBL
Match: A0A6J1IWQ0 (auxin-responsive protein SAUR32-like OS=Cucurbita maxima OX=3661 GN=LOC111479275 PE=3 SV=1)

HSP 1 Score: 204 bits (520), Expect = 1.62e-66
Identity = 101/108 (93.52%), Postives = 102/108 (94.44%), Query Frame = 0


Query: 1   MPGGERRRQHSAAAAVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGF 60
           MPGG+RRR HS AA VPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGF
Sbjct: 1   MPGGDRRRLHSGAA-VPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGF 60

Query: 61  DQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHHHHHHHHVGCFRVSF 108
           DQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHHHHH   VGCFRVSF
Sbjct: 61  DQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHHHHH---VGCFRVSF 104

[Close]

BLAST of Cp4.1LG03g15990 vs. ExPASy TrEMBL
Match: A0A6J1EEX5 (auxin-responsive protein SAUR32-like OS=Cucurbita moschata OX=3662 GN=LOC111431915 PE=3 SV=1)

HSP 1 Score: 201 bits (511), Expect = 3.71e-65
Identity = 100/108 (92.59%), Postives = 100/108 (92.59%), Query Frame = 0


Query: 1   MPGGERRRQHSAAAAVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGF 60
           M GGERRRQHS A  VPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGF
Sbjct: 1   MGGGERRRQHSGAG-VPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGF 60

Query: 61  DQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHHHHHHHHVGCFRVSF 108
           DQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHHHH    VGCFRVSF
Sbjct: 61  DQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHHHH----VGCFRVSF 103

[Close]

BLAST of Cp4.1LG03g15990 vs. ExPASy TrEMBL
Match: A0A5D3DBZ9 (Auxin-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00700 PE=3 SV=1)

HSP 1 Score: 199 bits (505), Expect = 3.58e-64
Identity = 99/110 (90.00%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 1   MPGGERRRQHSAAAAVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGF 60
           M GGERRRQ  + AAVPKGCLAV+VGQK EEQQRFVVPVMYFNHPRFMQLLKEAEEEYGF
Sbjct: 1   MGGGERRRQ--SGAAVPKGCLAVKVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGF 60

Query: 61  DQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHHHHHHH--HVGCFRVSF 108
           DQKGTIAIPCHVEEFRHVQGMIDRENSFHRRH+HHHHHH  H+GCFRVSF
Sbjct: 61  DQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHNHHHHHHSHHLGCFRVSF 108

[Close]

BLAST of Cp4.1LG03g15990 vs. ExPASy TrEMBL
Match: A0A0A0L5S7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118740 PE=3 SV=1)

HSP 1 Score: 197 bits (500), Expect = 2.28e-63
Identity = 99/113 (87.61%), Postives = 102/113 (90.27%), Query Frame = 0


Query: 1   MPGGERRRQHSAAAAVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGF 60
           M GGERRRQ SA   VPKGCLAV+VGQK EEQQRFVVPVMYFNHPRFMQLLKEAEEEYGF
Sbjct: 1   MGGGERRRQSSAT--VPKGCLAVKVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGF 60

Query: 61  DQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHHHHH-----HHHVGCFRVSF 108
           DQKGTIAIPCHVEEFRHVQGMIDRENSFHRRH+HHHH     HHH+GCFRVSF
Sbjct: 61  DQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHNHHHHQQQHHHHHLGCFRVSF 111

[Close]

BLAST of Cp4.1LG03g15990 vs. ExPASy TrEMBL
Match: A0A6J1D068 (auxin-responsive protein SAUR32-like OS=Momordica charantia OX=3673 GN=LOC111016369 PE=3 SV=1)

HSP 1 Score: 179 bits (453), Expect = 3.82e-56
Identity = 88/106 (83.02%), Postives = 92/106 (86.79%), Query Frame = 0


Query: 3   GGERRRQHSAAAAVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ 62
           GG  +RQ SA AAVPKGCLAV+VG + EEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ
Sbjct: 15  GGHGKRQGSATAAVPKGCLAVKVGHQGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ 74

Query: 63  KGTIAIPCHVEEFRHVQGMIDRENSFHRRHHHHHHHHHVGCFRVSF 108
           KGTI IPCHVE+FRHVQ MIDRENSF R     HHHHHVGCFRVSF
Sbjct: 75  KGTITIPCHVEQFRHVQCMIDRENSFRR-----HHHHHVGCFRVSF 115

[Close]

BLAST of Cp4.1LG03g15990 vs. TAIR 10
Match: AT2G46690.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 139.0 bits (349), Expect = 2.2e-33
Identity = 69/106 (65.09%), Postives = 82/106 (77.36%), Query Frame = 0


Query: 7   RRQHSAAAAVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTI 66
           R+Q      VPKGCLA++VG + EEQQRF+VPV+YFNHP FMQLLKEAE+EYGFDQKGTI
Sbjct: 15  RKQSVKVKDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTI 74

Query: 67  AIPCHVEEFRHVQGMIDRENSFHRRHHHHH-------HHHHVGCFR 106
            IPCHVEEFR+VQ +ID E S +  ++HHH       +HH VGCFR
Sbjct: 75  TIPCHVEEFRYVQALIDGERSVYNGNNHHHRHGGRDQYHHLVGCFR 120

[Close]

BLAST of Cp4.1LG03g15990 vs. TAIR 10
Match: AT4G00880.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 136.7 bits (343), Expect = 1.1e-32
Identity = 70/96 (72.92%), Postives = 79/96 (82.29%), Query Frame = 0


Query: 16  VPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEF 75
           VPKGCLAV+VGQ  EEQ+RFV+PVMYFNHP F QLLKEAEEE+GF QKGTI IPCHVEEF
Sbjct: 28  VPKGCLAVKVGQ-GEEQERFVIPVMYFNHPLFGQLLKEAEEEFGFAQKGTITIPCHVEEF 87

Query: 76  RHVQGMIDRENSFH-----RRHHHHHHHHHVGCFRV 107
           R+VQG+IDREN+         HHHHHH+H + CFRV
Sbjct: 88  RYVQGLIDRENTRFLGTNLLDHHHHHHNHLIRCFRV 122

[Close]

BLAST of Cp4.1LG03g15990 vs. TAIR 10
Match: AT3G61900.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 127.9 bits (320), Expect = 5.0e-30
Identity = 58/72 (80.56%), Postives = 65/72 (90.28%), Query Frame = 0


Query: 16  VPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEF 75
           VPKGCLA++VG KEEE+QRFVVPV YFNHP FMQLL+EAEEEYGF+QKGTI IPCHVE F
Sbjct: 30  VPKGCLAIKVGSKEEEKQRFVVPVFYFNHPLFMQLLREAEEEYGFEQKGTITIPCHVEVF 89

Query: 76  RHVQGMIDRENS 88
           R+VQ MI+RE S
Sbjct: 90  RYVQDMINRERS 101

[Close]

BLAST of Cp4.1LG03g15990 vs. TAIR 10
Match: AT5G53590.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 99.8 bits (247), Expect = 1.5e-21
Identity = 51/99 (51.52%), Postives = 71/99 (71.72%), Query Frame = 0


Query: 16  VPKGCLAVRVGQKEEEQ--QRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVE 75
           VPKGC+A+ VG +++E+   RFVVP+++ +HP F+ LLKEAE+EYGF   G I IPC V+
Sbjct: 46  VPKGCVAIMVGHEDDEEGLHRFVVPLVFLSHPLFLDLLKEAEKEYGFKHDGPITIPCGVD 105

Query: 76  EFRHVQGMIDRENSFHRRH--------HHHHHHHHVGCF 105
           EF+HVQ +ID E   HRRH        +H+HH++H+ CF
Sbjct: 106 EFKHVQEVIDEET--HRRHSHGGHGHNNHNHHNNHLRCF 142

[Close]

BLAST of Cp4.1LG03g15990 vs. TAIR 10
Match: AT3G60690.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 84.3 bits (207), Expect = 6.4e-17
Identity = 38/73 (52.05%), Postives = 53/73 (72.60%), Query Frame = 0


Query: 16  VPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEF 75
           VPKG  AV +G+K+ + QR +VP++YFNHP F +LL+EAEEE+GF Q+G I IPC   +F
Sbjct: 88  VPKGHSAVYIGKKDGDFQRVLVPIVYFNHPLFGELLREAEEEFGFSQEGGITIPCPYSDF 147

Query: 76  RHVQGMIDRENSF 89
           + VQ  I+  + F
Sbjct: 148 KRVQTRIESGSGF 160

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g15990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUZ3	3.1e-32	65.09	Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 S...	[more]
O22150	2.2e-14	50.68	Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana OX=3702 GN=SAUR36 PE=2 S...	[more]
Q41220	5.1e-11	43.66	Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana OX=3702 GN=SAUR15 PE=1 S...	[more]
Q9FJG0	1.5e-10	44.87	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]
Q9FJF7	2.5e-10	45.83	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S...	[more]

BLAST of Cp4.1LG03g15990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023526937.1	3.80e-75	100.00	auxin-responsive protein SAUR32-like [Cucurbita pepo subsp. pepo]	[more]
XP_022979593.1	3.35e-66	93.52	auxin-responsive protein SAUR32-like [Cucurbita maxima]	[more]
XP_022924405.1	7.67e-65	92.59	auxin-responsive protein SAUR32-like [Cucurbita moschata] >KAG6582694.1 Auxin-re...	[more]
XP_038900878.1	3.23e-64	92.59	auxin-responsive protein SAUR32-like [Benincasa hispida]	[more]
KAA0048857.1	7.40e-64	90.00	auxin-responsive family protein [Cucumis melo var. makuwa] >TYK20809.1 auxin-res...	[more]

BLAST of Cp4.1LG03g15990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IWQ0	1.62e-66	93.52	auxin-responsive protein SAUR32-like OS=Cucurbita maxima OX=3661 GN=LOC111479275...	[more]
A0A6J1EEX5	3.71e-65	92.59	auxin-responsive protein SAUR32-like OS=Cucurbita moschata OX=3662 GN=LOC1114319...	[more]
A0A5D3DBZ9	3.58e-64	90.00	Auxin-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0L5S7	2.28e-63	87.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118740 PE=3 SV=1	[more]
A0A6J1D068	3.82e-56	83.02	auxin-responsive protein SAUR32-like OS=Momordica charantia OX=3673 GN=LOC111016...	[more]

BLAST of Cp4.1LG03g15990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46690.1	2.2e-33	65.09	SAUR-like auxin-responsive protein family	[more]
AT4G00880.1	1.1e-32	72.92	SAUR-like auxin-responsive protein family	[more]
AT3G61900.1	5.0e-30	80.56	SAUR-like auxin-responsive protein family	[more]
AT5G53590.1	1.5e-21	51.52	SAUR-like auxin-responsive protein family	[more]
AT3G60690.1	6.4e-17	52.05	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 10..81 e-value: 1.2E-22 score: 79.9
None	No IPR available	PANTHER	PTHR31374:SF213	SUBFAMILY NOT NAMED	coord: 7..102
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 7..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g15990.1	Cp4.1LG03g15990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin