Cp4.1LG03g15860 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG03g15860
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionheterogeneous nuclear ribonucleoprotein Q-like
LocationCp4.1LG03: 13577149 .. 13581424 (-)
RNA-Seq ExpressionCp4.1LG03g15860
SyntenyCp4.1LG03g15860
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGAAAGTTTTACAGCGTAGTTGCGTGAAATCAAGTATGGAATTGCTATTTTTGGCATAGAAAGGCTTTTTTGGACATTTCGCGGCACAAATCGGTAACAGAGAAGGGAGAAGCTACGCGCGCGAGGAAGACGACGACGACGTTTAACTAGAGGGAAGATTTCGGTTCCAGTTAAGCCCATGCGCTTGAAGAAGCCCTCGTCGTGTCGGCCCAGAGGGGCTTCGAACTCATTCTGAGAGATTTAACGCAGCTCTGATTCTCCATTTTCTCCATTTTCTCCGAGGCGGAAATAGGAACCAGCCCAGATACGCAAAGCAGGACTCGCTCACTATCACCTCAATTCCCCACTTCACTGGTATGCCTTACAAGACTCCCAATGTGATTTATTCGCCTTTCTTATTCCATTTCTTTGTTTTCTGTTTGTCCGATTTGCATACTGAGGGCCATGTTTTATTTATTTTGTGTCGTGAGACTGGGATGTCTTTGGAACGAAGTACACTGGTCGACGGAACATGAGTTAGGCTTATGTGCCCATAGATTTTATTTCTTAATTCTGTGTGCATGCATCATATTTCCTCTCCCCAGTCTGTTCGTATTAGTTTTTTGAATTTCATCATCTTTGAGCGAGCACTGTTGAAATTACTTTTAAAATTCTTAAATCTTCTGATTCTTGTTCATAAAAACTAGTCTGGACTCCAAATAATGTTGCTTCTAGATATGTTCAACACGAACTGAAGTGGGCAGGTTTTCATTCTGATCATTTAATATTTTTCCTTCTACCAGTTACTGGTACCCTCATACCCATATTTATATCTCAGATACATTTACTACATTACAGGTGATTTTGTGCTTATCAAGTTTATTTGTTGAATGACAATATCTGTGACATAAAGCAGTCATGGCTGATGGTTCAGAAGTCGAGGAGCGGGTGGATCTTGAAGAGGACAATTACATGGAAGAGATAGATGATGATGTGGAAGAACATGTTGATGAGGATGGAGTAGATAGGAGAGATGGGGAACATCCCGAATATGATGTTGAAGAAGTAGGTGAAGAGCCTCGAATTGGCACGAACGAAGAAGATACATTTTCTGGAGATGGTAGAAATAACGCATCCACAGAGTCTATAGAAAAGATAGAAAAGTCTACTTCTTTATTAGATGAAGATGATCTAGAGAAGCATGCTCAGCTTCTTGCTCTTCCTCCTCATGGATCTGAAATTTTTATTGGTGGACTTTCACGTGATGTTTCAGAAGATGACTTGAGAGATTTGTGTGAATCACTAGGAGAAATATTTGAGGTCTGGAGTGGTGTTTATTTTCTCTCATGCTTTCTCGTTCTTTCTCTGGGCCTTCGATTTTAGAGGTACGTTCTGTAATACAATTGTTTTGCAGATAAGGATAATAAAGGACAGAGATTCTGGTGAAAGCAAAGGTTATGCTTTTATATTGTTTAAAACAAAAGAGGCGGCACAGAAAGCTATAGAGGATTTACATGGTAAAGAAGTCAAGGTAATGTTGGACTCCTTAAGATTTTGATGGTCTTATTACTTTATTATGTTTCAGCAACTTCAAAGCTGCTTTTTTTTCAGATATTCATCATCAATAAATTTAAACTGATTTTAGTCATCCTCCACACTACAGGGTAAAACGATAAGGTGTTCTCTGTCTGATTCTAAGCACAGACTATTTATTGGTAATATCCCAAAAAGTTGGACAGAGGATGAGTTTAGGAGACTTATAGAAGGAGTTGGCCCTGGAGTTGAAAACATTGAGCTTATCAAGGTGGAGTTGCAAATTTATACATTTTATTCTTTGAAATTGATAGTTATTGAGGCTTGATGTTCTTTTGTCTGTATAAACTATTTCAGGATCCTCAGAACCCAAGCCGAAATCGTGGATTTGCATTTGTTCTGTATTATAACAATGCATGTGCTGACTATTCGAGGCAGAAAATGTCGAATGTGAATTTTAAGCTGGACGGAAATTCCCCAACTGTTAGTTGGGCTGATCCAAAAAGTATGTCTGATAACTCTGCCGTTGCTCAGGTAATTAAGTTATCATCATTGGAGAAAATTTTCTGGGATCTGCGTGACATTTTTCAAGCACCTTGAACCTTTGTATCAACTAGAATTTGGTTGACAAATGTGGTACTAAGGTTGAAAGTTATAACTGAAACGGTTCTTGGGCAGAGAAAATTCATGTGTCGTGCTGTATTGTTTCTTCAATTTCAATAACTAAATAAGGGAACCAGATATCTTAACCAAAAAAATTATATTGATTGATCAATGGAACATTGAGAAAGGAAATGTGTGTAGAAAGACAGTCATCTTGGTGGTTTCGAGGAACCTAATTTCGTAGCTTCCTCTTTGAGCCAAGCTTAGTACAAAACTCTGACAAAGTAGTCTGCCACGCCCCACCGATCCTCTGCTGGCCACTGACAAACTTCAACGAAGTCTAACTATCATTTTTGACAAACCATTGTACTACCCGTATGCTTATTGATATTAAGGTCTAACACTGATGTTTGGGGTTCGGTGCATTCTTTTCAAAAGCCTGTGTAATGGAAATGAGAATCTATTTAGCGATGAATGACGGATACTAAATTTTTTGGCTTGTCTTCTTGAAACCTCTCTCTAGCCAACAACACTGAGTGCATCTCCTTGGTGAGCATGTAAGAATTGATTGTGTTACCAATCGTTTCTATCTCTGAAACATTTGAATTGGTTGTCGTCAGTTCTCTTATGCCTGTGTATTAAGATGTATTTGAAGGAATTGAATTATACTTTGAATTTAGTTTTCAAATTTACAGGAAGATATCTAAAAGCGCATGGTAGTTTGAATACTGCATCGTTGTTGGTGAAAGCTATTAAGAATTGTTATGTTTTGGCATTGACATAACAATTCTTAGTTCTACTACATTATGGATCGCAGGTGAAGGCTCTTTATGTCAAAAACATACCTGAGAATACTACTACTGAGCAATTGAAAGAACTGTTTCAGCAGCATGGGGAAGTGACAAAAGTGAATATGCCACCTGGCAAAGCTGGGAGTAGCAAACGGGATTTTGCATTCATCCATTATGCTGAGAGGTCAAGTGCATTGAAGGCTGTTAAAGAGACAGAGAAATATGAAATTGAAGGTTTTGTTTTTATATCTTCAGAGATTTACAGTTGAAATCTCAAATGCACAATCATATCCCCTTTTCTTAACAGAAAAACGTTGAACATATTCAAATTAGGCTGCAGACAGAAGTTGGCCGGTGGCCCACTCTTTGTTTTTTTCATAGCTCTCTTTGCAGTGTTTTCTCTCTGTTTACTGAAATGGACGATGTGTCCAACATATGCATGGAATTTCATTTAGTACAAGTCTTCAACATTTCAAGTTGTCTAAACATATCAGTTGTATATGACGTTGTTTCTATAAAGGAAAAAAGGATGATAGAAGGGATCCAGAGATGCTTTGTCTTAACTTTTTTCTTCCAACCCAAAGAATAATGTTCAGGGATTTTATCTGCAGGCCAACTGTTGGAGGTTGTCCTTGCTAAGCCTCAAAGTGATAAAAAATCAGATGGGGCCTATTCCCACATATCTGGAGGTAATCCCAACCATATTCTTCACGGTGGATACGGTGGTTATGGCGGAAACCCATATGGTTCCTTAGGTGGGTATGGTGTTACTGCTGGCTTCCATCAGGTACTTTCTTACCTAGAAGGCTTTTAATAAAGAAAAGAATTCCACATTAATCTCATGGATTTGCTTGCATGAACAGCCAGTGATTTATGGTAGGGGGCCAATGCCAGCGGGAATGCAGATGGTACCGATGGTTTTACCAGATGGTCGAATTGGTTATGTCCTGTAAGATTTCGCTCGACTTCAAATCCATTTCTATATAAGTATATAAGATAAGTAGATTGTATATTGTCACCTGTGAATGCAGTCAGCAACCCGGAGTACCAATGCCACCGTCTCGACCTCGAAGAAGTGAGAGGAGCAATGGCTCAGGTGGACCGGCAGGTCGTTCGGGAGGTAGCAGTAGTGGTGATGAAACCAACCGTGGCAGAAGGTATCGACCCTATTAGTGATTTAGCCTAATGGTGTGATTGAAGCATTAGGCTAAATCACAGGAAATAACAAATTGAAGGCAATTCTTATTATTAGCTTTTGGAAAATTATGTGCACCAAAGCAATTGCTCTCTCACCCATTCTTCTTGGTCTTCTTTTGAACTTGATACTGTATATTCAACTCAACTCATAAATAACAAGGATTCTGTTTGT

mRNA sequence

AGGAAAGTTTTACAGCGTAGTTGCGTGAAATCAAGTATGGAATTGCTATTTTTGGCATAGAAAGGCTTTTTTGGACATTTCGCGGCACAAATCGGTAACAGAGAAGGGAGAAGCTACGCGCGCGAGGAAGACGACGACGACGTTTAACTAGAGGGAAGATTTCGGTTCCAGTTAAGCCCATGCGCTTGAAGAAGCCCTCGTCGTGTCGGCCCAGAGGGGCTTCGAACTCATTCTGAGAGATTTAACGCAGCTCTGATTCTCCATTTTCTCCATTTTCTCCGAGGCGGAAATAGGAACCAGCCCAGATACGCAAAGCAGGACTCGCTCACTATCACCTCAATTCCCCACTTCACTGGTGATTTTGTGCTTATCAAGTTTATTTGTTGAATGACAATATCTGTGACATAAAGCAGTCATGGCTGATGGTTCAGAAGTCGAGGAGCGGGTGGATCTTGAAGAGGACAATTACATGGAAGAGATAGATGATGATGTGGAAGAACATGTTGATGAGGATGGAGTAGATAGGAGAGATGGGGAACATCCCGAATATGATGTTGAAGAAGTAGGTGAAGAGCCTCGAATTGGCACGAACGAAGAAGATACATTTTCTGGAGATGGTAGAAATAACGCATCCACAGAGTCTATAGAAAAGATAGAAAAGTCTACTTCTTTATTAGATGAAGATGATCTAGAGAAGCATGCTCAGCTTCTTGCTCTTCCTCCTCATGGATCTGAAATTTTTATTGGTGGACTTTCACGTGATGTTTCAGAAGATGACTTGAGAGATTTGTGTGAATCACTAGGAGAAATATTTGAGATAAGGATAATAAAGGACAGAGATTCTGGTGAAAGCAAAGGTTATGCTTTTATATTGTTTAAAACAAAAGAGGCGGCACAGAAAGCTATAGAGGATTTACATGGTAAAGAAGTCAAGGGTAAAACGATAAGGTGTTCTCTGTCTGATTCTAAGCACAGACTATTTATTGGTAATATCCCAAAAAGTTGGACAGAGGATGAGTTTAGGAGACTTATAGAAGGAGTTGGCCCTGGAGTTGAAAACATTGAGCTTATCAAGGTGAAGGCTCTTTATGTCAAAAACATACCTGAGAATACTACTACTGAGCAATTGAAAGAACTGTTTCAGCAGCATGGGGAAGTGACAAAAGTGAATATGCCACCTGGCAAAGCTGGGAGTAGCAAACGGGATTTTGCATTCATCCATTATGCTGAGAGGTCAAGTGCATTGAAGGCTGTTAAAGAGACAGAGAAATATGAAATTGAAGGCCAACTGTTGGAGGTTGTCCTTGCTAAGCCTCAAAGTGATAAAAAATCAGATGGGGCCTATTCCCACATATCTGGAGGTAATCCCAACCATATTCTTCACGGTGGATACGGTGGTTATGGCGGAAACCCATATGGTTCCTTAGGTGGGTATGGTGTTACTGCTGGCTTCCATCAGCCAGTGATTTATGGTAGGGGGCCAATGCCAGCGGGAATGCAGATGGTACCGATGGTTTTACCAGATGGTCGAATTGGTTATGTCCTTCAGCAACCCGGAGTACCAATGCCACCGTCTCGACCTCGAAGAAGTGAGAGGAGCAATGGCTCAGGTGGACCGGCAGGTCGTTCGGGAGGTAGCAGTAGTGGTGATGAAACCAACCGTGGCAGAAGGTATCGACCCTATTAGTGATTTAGCCTAATGGTGTGATTGAAGCATTAGGCTAAATCACAGGAAATAACAAATTGAAGGCAATTCTTATTATTAGCTTTTGGAAAATTATGTGCACCAAAGCAATTGCTCTCTCACCCATTCTTCTTGGTCTTCTTTTGAACTTGATACTGTATATTCAACTCAACTCATAAATAACAAGGATTCTGTTTGT

Coding sequence (CDS)

ATGGCTGATGGTTCAGAAGTCGAGGAGCGGGTGGATCTTGAAGAGGACAATTACATGGAAGAGATAGATGATGATGTGGAAGAACATGTTGATGAGGATGGAGTAGATAGGAGAGATGGGGAACATCCCGAATATGATGTTGAAGAAGTAGGTGAAGAGCCTCGAATTGGCACGAACGAAGAAGATACATTTTCTGGAGATGGTAGAAATAACGCATCCACAGAGTCTATAGAAAAGATAGAAAAGTCTACTTCTTTATTAGATGAAGATGATCTAGAGAAGCATGCTCAGCTTCTTGCTCTTCCTCCTCATGGATCTGAAATTTTTATTGGTGGACTTTCACGTGATGTTTCAGAAGATGACTTGAGAGATTTGTGTGAATCACTAGGAGAAATATTTGAGATAAGGATAATAAAGGACAGAGATTCTGGTGAAAGCAAAGGTTATGCTTTTATATTGTTTAAAACAAAAGAGGCGGCACAGAAAGCTATAGAGGATTTACATGGTAAAGAAGTCAAGGGTAAAACGATAAGGTGTTCTCTGTCTGATTCTAAGCACAGACTATTTATTGGTAATATCCCAAAAAGTTGGACAGAGGATGAGTTTAGGAGACTTATAGAAGGAGTTGGCCCTGGAGTTGAAAACATTGAGCTTATCAAGGTGAAGGCTCTTTATGTCAAAAACATACCTGAGAATACTACTACTGAGCAATTGAAAGAACTGTTTCAGCAGCATGGGGAAGTGACAAAAGTGAATATGCCACCTGGCAAAGCTGGGAGTAGCAAACGGGATTTTGCATTCATCCATTATGCTGAGAGGTCAAGTGCATTGAAGGCTGTTAAAGAGACAGAGAAATATGAAATTGAAGGCCAACTGTTGGAGGTTGTCCTTGCTAAGCCTCAAAGTGATAAAAAATCAGATGGGGCCTATTCCCACATATCTGGAGGTAATCCCAACCATATTCTTCACGGTGGATACGGTGGTTATGGCGGAAACCCATATGGTTCCTTAGGTGGGTATGGTGTTACTGCTGGCTTCCATCAGCCAGTGATTTATGGTAGGGGGCCAATGCCAGCGGGAATGCAGATGGTACCGATGGTTTTACCAGATGGTCGAATTGGTTATGTCCTTCAGCAACCCGGAGTACCAATGCCACCGTCTCGACCTCGAAGAAGTGAGAGGAGCAATGGCTCAGGTGGACCGGCAGGTCGTTCGGGAGGTAGCAGTAGTGGTGATGAAACCAACCGTGGCAGAAGGTATCGACCCTATTAG

Protein sequence

MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNEEDTFSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSEDDLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCSLSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIKVKALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQSDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYRPY
Homology
BLAST of Cp4.1LG03g15860 vs. ExPASy Swiss-Prot
Match: Q9ASP6 (Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana OX=3702 GN=LIF2 PE=1 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 2.2e-126
Identity = 265/502 (52.79%), Postives = 334/502 (66.53%), Query Frame = 0

Query: 1   MADGSEVEERVDLEEDNY-----------MEEIDDDVEEHVDEDGVDRRDGEHPEYDVEE 60
           M+D  + ++RVD EE +Y           +EE +++ EE  D+D V  ++ E  E +VE+
Sbjct: 1   MSDARDNDDRVDFEEGSYSEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAE--EREVED 60

Query: 61  VGEEPRIGTNEEDT---FSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGS 120
            G+    G + ED     + D  N+   E+ +  EK  S +D++D EK++ LL+LPPHGS
Sbjct: 61  YGDTK--GGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGS 120

Query: 121 EIFIGGLSRDVSEDDLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIED 180
           E+FIGGL RDV E+DLRDLCE +GEIFE+R++KDRDSG+SKGYAF+ FKTK+ AQKAIE+
Sbjct: 121 EVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEE 180

Query: 181 LHGKEVKGKTIRCSLSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK------ 240
           LH KE KGKTIRCSLS++K+RLFIGNIPK+WTEDEFR++IE VGPGVENIELIK      
Sbjct: 181 LHSKEFKGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTT 240

Query: 241 ------------------------------------------------------VKALYV 300
                                                                 VKALYV
Sbjct: 241 RNRGFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYV 300

Query: 301 KNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKY 360
           KNIPENT+TEQLKELFQ+HGEVTK+  PPGK G  KRDF F+HYAERSSALKAVK+TE+Y
Sbjct: 301 KNIPENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERY 360

Query: 361 EIEGQLLEVVLAKPQSDKKSD-GAYSHISGGNPNHILHGGYGGYGGNPYGSLG-GYGVTA 420
           E+ GQ LEVVLAKPQ+++K D  +YS+ +   P   +H  +GG+   PYG++G G G+  
Sbjct: 361 EVNGQPLEVVLAKPQAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAG 420

Query: 421 GFHQPVIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPM---PPSRPRRSERSNGSGGP 424
            F QP+IYGRG MP GMQMVPM+LPDGR+GYVLQQPG+PM   PP RPRR++R+NGS G 
Sbjct: 421 SFSQPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGG 480

BLAST of Cp4.1LG03g15860 vs. ExPASy Swiss-Prot
Match: O43390 (Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.5e-26
Identity = 126/423 (29.79%), Postives = 184/423 (43.50%), Query Frame = 0

Query: 102 PPHGSEIFIGGLSRDVSEDDLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQ 161
           P  G+E+F+G + RD+ ED+L  L E  G I+++R++ D  SG+++GYAFI F  KEAAQ
Sbjct: 161 PGIGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQ 220

Query: 162 KAIEDLHGKEVK-GKTIRCSLSDSKHRLFIGNIPKSWTE----DEFRRLIEG-------- 221
           +A++     E++ GK +   +S + +RLF+G+IPK+ T+    +EF ++ EG        
Sbjct: 221 EAVKLCDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYH 280

Query: 222 -----------------------------------VGPGVENIE------------LIKV 281
                                              V   V  +E            + KV
Sbjct: 281 QPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKV 340

Query: 282 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 341
           K L+V+N+    T E L++ F + G++ +V           +D+AF+H+ +R +A+KA+ 
Sbjct: 341 KVLFVRNLATTVTEEILEKSFSEFGKLERV--------KKLKDYAFVHFEDRGAAVKAMD 400

Query: 342 ETEKYEIEGQLLEVVLAKPQSDKKS--------------DGAYSHISGGNPNHI----LH 401
           E    EIEG+ +E+VLAKP   K+               +  Y H     P  I      
Sbjct: 401 EMNGKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAYEDYYYHPPPRMPPPIRGRGRG 460

Query: 402 GGYGGYGGNP--------YGSLGGY---GVTAGFHQP--------VIYGRG--------- 418
           GG GGYG  P        Y    GY       G+  P         + GRG         
Sbjct: 461 GGRGGYGYPPDYYGYEDYYDDYYGYDYHDYRGGYEDPYYGYDDGYAVRGRGGGRGGRGAP 520

BLAST of Cp4.1LG03g15860 vs. ExPASy Swiss-Prot
Match: O60506 (Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=1 SV=2)

HSP 1 Score: 120.9 bits (302), Expect = 3.4e-26
Identity = 93/315 (29.52%), Postives = 150/315 (47.62%), Query Frame = 0

Query: 102 PPHGSEIFIGGLSRDVSEDDLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQ 161
           P  G+EIF+G + RD+ ED+L  L E  G I+++R++ D  +G ++GYAF+ F TKEAAQ
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217

Query: 162 KAIEDLHGKEVK-GKTIRCSLSDSKHRLFIGNIPKSWTEDEF------------------ 221
           +A++  +  E++ GK I   +S + +RLF+G+IPKS T+++                   
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277

Query: 222 --------------------------RRLIEG---VGPGVENIE------------LIKV 281
                                     RRL+ G   V   V  +E            + KV
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337

Query: 282 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 341
           K L+V+N+    T E L++ F Q G++ +V           +D+AFIH+ ER  A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKAFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 397

Query: 342 ETEKYEIEGQLLEVVLAKPQSDKKSDGAYSHISGGNPNHILHGGYGGYG---------GN 348
           E    ++EG+ +E+V AKP   K+ +      +  N    ++  Y  YG         G 
Sbjct: 398 EMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQ---MYDDYYYYGPPHMPPPTRGR 457

BLAST of Cp4.1LG03g15860 vs. ExPASy Swiss-Prot
Match: Q7TMK9 (Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=2)

HSP 1 Score: 120.6 bits (301), Expect = 4.4e-26
Identity = 93/315 (29.52%), Postives = 150/315 (47.62%), Query Frame = 0

Query: 102 PPHGSEIFIGGLSRDVSEDDLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQ 161
           P  G+EIF+G + RD+ ED+L  L E  G I+++R++ D  +G ++GYAF+ F TKEAAQ
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217

Query: 162 KAIEDLHGKEVK-GKTIRCSLSDSKHRLFIGNIPKSWTEDEF------------------ 221
           +A++  +  E++ GK I   +S + +RLF+G+IPKS T+++                   
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277

Query: 222 --------------------------RRLIEG---VGPGVENIE------------LIKV 281
                                     RRL+ G   V   V  +E            + KV
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337

Query: 282 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 341
           K L+V+N+    T E L++ F Q G++ +V           +D+AFIH+ ER  A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKSFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 397

Query: 342 ETEKYEIEGQLLEVVLAKPQSDKKSDGAYSHISGGNPNHILHGGYGGYG---------GN 348
           E    ++EG+ +E+V AKP   K+ +      +  N    ++  Y  YG         G 
Sbjct: 398 EMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQ---MYDDYYYYGPPHMPPPTRGR 457

BLAST of Cp4.1LG03g15860 vs. ExPASy Swiss-Prot
Match: Q7TP47 (Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 4.4e-26
Identity = 93/315 (29.52%), Postives = 150/315 (47.62%), Query Frame = 0

Query: 102 PPHGSEIFIGGLSRDVSEDDLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQ 161
           P  G+EIF+G + RD+ ED+L  L E  G I+++R++ D  +G ++GYAF+ F TKEAAQ
Sbjct: 68  PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 127

Query: 162 KAIEDLHGKEVK-GKTIRCSLSDSKHRLFIGNIPKSWTEDEF------------------ 221
           +A++  +  E++ GK I   +S + +RLF+G+IPKS T+++                   
Sbjct: 128 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 187

Query: 222 --------------------------RRLIEG---VGPGVENIE------------LIKV 281
                                     RRL+ G   V   V  +E            + KV
Sbjct: 188 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 247

Query: 282 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 341
           K L+V+N+    T E L++ F Q G++ +V           +D+AFIH+ ER  A+KA++
Sbjct: 248 KVLFVRNLANTVTEEILEKSFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 307

Query: 342 ETEKYEIEGQLLEVVLAKPQSDKKSDGAYSHISGGNPNHILHGGYGGYG---------GN 348
           E    ++EG+ +E+V AKP   K+ +      +  N    ++  Y  YG         G 
Sbjct: 308 EMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQ---MYDDYYYYGPPHMPPPTRGR 367

BLAST of Cp4.1LG03g15860 vs. NCBI nr
Match: XP_023527400.1 (heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo] >XP_023527401.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo] >XP_023527402.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 790 bits (2039), Expect = 2.93e-286
Identity = 423/482 (87.76%), Postives = 423/482 (87.76%), Query Frame = 0

Query: 1   MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNE 60
           MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNE
Sbjct: 1   MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNE 60

Query: 61  EDTFSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED 120
           EDTFSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED
Sbjct: 61  EDTFSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
           DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS
Sbjct: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK-------------------- 240
           LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK                    
Sbjct: 181 LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240

Query: 241 ---------------------------------------VKALYVKNIPENTTTEQLKEL 300
                                                  VKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSNVNFKLDGNSPTVSWADPKSMSDNSAVAQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
           FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360

Query: 361 SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM 420
           SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR 423
           QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR 480

BLAST of Cp4.1LG03g15860 vs. NCBI nr
Match: XP_022924386.1 (heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita moschata] >XP_022924387.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita moschata] >XP_022924388.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita moschata] >XP_022924389.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita moschata])

HSP 1 Score: 784 bits (2024), Expect = 5.65e-284
Identity = 420/482 (87.14%), Postives = 421/482 (87.34%), Query Frame = 0

Query: 1   MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNE 60
           MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTN+
Sbjct: 1   MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNQ 60

Query: 61  EDTFSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED 120
           ED FSGDGRNNAS ESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED
Sbjct: 61  EDKFSGDGRNNASIESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
           DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS
Sbjct: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK-------------------- 240
           LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK                    
Sbjct: 181 LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240

Query: 241 ---------------------------------------VKALYVKNIPENTTTEQLKEL 300
                                                  VKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSNVNFKLDGNSPTVSWADPKSMPDNSAVAQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
           FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360

Query: 361 SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM 420
           SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR 423
           QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR 480

BLAST of Cp4.1LG03g15860 vs. NCBI nr
Match: KAG6582699.1 (Heterogeneous nuclear ribonucleoprotein Q, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 780 bits (2014), Expect = 5.34e-282
Identity = 417/482 (86.51%), Postives = 419/482 (86.93%), Query Frame = 0

Query: 1   MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNE 60
           MADGSEVEERVDLEEDNYMEE+DDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNE
Sbjct: 29  MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNE 88

Query: 61  EDTFSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED 120
           ED FSGDGRNNAS ESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED
Sbjct: 89  EDKFSGDGRNNASIESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED 148

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
           DLRDLCE LGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS
Sbjct: 149 DLRDLCEPLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS 208

Query: 181 LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK-------------------- 240
           LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK                    
Sbjct: 209 LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 268

Query: 241 ---------------------------------------VKALYVKNIPENTTTEQLKEL 300
                                                  VKALYVKNIPENTTTEQLKEL
Sbjct: 269 CADYSRQKMLNVNFKLDGNSPTVSWADPKSMSDNSAVAQVKALYVKNIPENTTTEQLKEL 328

Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
           FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 329 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 388

Query: 361 SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM 420
           SDKKSDGAYSH+SGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM
Sbjct: 389 SDKKSDGAYSHVSGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM 448

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR 423
           QMVPMVLPDGRIGYVLQQPG PMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR
Sbjct: 449 QMVPMVLPDGRIGYVLQQPGAPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR 508

BLAST of Cp4.1LG03g15860 vs. NCBI nr
Match: XP_022979240.1 (heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita maxima] >XP_022979242.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita maxima] >XP_022979243.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita maxima])

HSP 1 Score: 771 bits (1991), Expect = 6.00e-279
Identity = 414/482 (85.89%), Postives = 417/482 (86.51%), Query Frame = 0

Query: 1   MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNE 60
           MAD SEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPR+GTNE
Sbjct: 1   MADASEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRLGTNE 60

Query: 61  EDTFSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED 120
           ED FSGDGRNNAS ESIEKIEKSTSLLDEDDLEKHAQLL+LPPHGSEIFIGGLSRDVSED
Sbjct: 61  EDKFSGDGRNNASIESIEKIEKSTSLLDEDDLEKHAQLLSLPPHGSEIFIGGLSRDVSED 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
           DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQ+AIEDLHGKEVKGKTIRCS
Sbjct: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQQAIEDLHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK-------------------- 240
           LSDSKHRLFIGNIPKSWTEDEFRRLIEGVG GVENIELIK                    
Sbjct: 181 LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGTGVENIELIKDPQNPSRNRGFAFVLYYNNA 240

Query: 241 ---------------------------------------VKALYVKNIPENTTTEQLKEL 300
                                                  VKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSNVNFKLDGNSPTVSWADPKSMPDNSAVAQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
           FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360

Query: 361 SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM 420
           SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYG TAGFHQPVIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGFTAGFHQPVIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR 423
           QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGG AGRSGGSSSGDETNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGAAGRSGGSSSGDETNRGRRYR 480

BLAST of Cp4.1LG03g15860 vs. NCBI nr
Match: XP_038903519.1 (heterogeneous nuclear ribonucleoprotein Q isoform X2 [Benincasa hispida])

HSP 1 Score: 727 bits (1877), Expect = 1.37e-261
Identity = 387/482 (80.29%), Postives = 406/482 (84.23%), Query Frame = 0

Query: 1   MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNE 60
           MADGSEVEERVDLEEDNYMEE+DDDVEEHVDEDGVDRR GEHPE DVEEVGEEP++GT+ 
Sbjct: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGEHPEEDVEEVGEEPQVGTDT 60

Query: 61  EDTFSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED 120
           ED FSGDGRN+ S ESIE  EKS SLLDEDDLEKHA+LLALPPHGSE+FIGGLSRDV E+
Sbjct: 61  EDRFSGDGRNSISIESIENREKSASLLDEDDLEKHAELLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
           DLRDLCESLGEIFEIRIIKDRDSGESKGYAFI F+TKEAAQKAIEDLHGKEVKGKTIRCS
Sbjct: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFRTKEAAQKAIEDLHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK-------------------- 240
           LSDSKHRLFIGN+PKSWT+DEF+ LIEG+GPGVENIELIK                    
Sbjct: 181 LSDSKHRLFIGNVPKSWTDDEFKALIEGIGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240

Query: 241 ---------------------------------------VKALYVKNIPENTTTEQLKEL 300
                                                  VKALYVKNIPENT+TEQLKEL
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTSTEQLKEL 300

Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
           FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360

Query: 361 SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM 420
           SDKKSDGAYS++SG +PNH+LHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSYMSGSHPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR 423
           QMVPMVLPDGRIGYV QQPGVPMPPSR RRSER+NGSGGP GRSGGSSSGDE NRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVFQQPGVPMPPSRSRRSERNNGSGGPTGRSGGSSSGDEVNRGRRYR 480

BLAST of Cp4.1LG03g15860 vs. ExPASy TrEMBL
Match: A0A6J1E8S5 (heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita moschata OX=3662 GN=LOC111431898 PE=4 SV=1)

HSP 1 Score: 784 bits (2024), Expect = 2.74e-284
Identity = 420/482 (87.14%), Postives = 421/482 (87.34%), Query Frame = 0

Query: 1   MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNE 60
           MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTN+
Sbjct: 1   MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNQ 60

Query: 61  EDTFSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED 120
           ED FSGDGRNNAS ESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED
Sbjct: 61  EDKFSGDGRNNASIESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
           DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS
Sbjct: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK-------------------- 240
           LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK                    
Sbjct: 181 LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240

Query: 241 ---------------------------------------VKALYVKNIPENTTTEQLKEL 300
                                                  VKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSNVNFKLDGNSPTVSWADPKSMPDNSAVAQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
           FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360

Query: 361 SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM 420
           SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR 423
           QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR 480

BLAST of Cp4.1LG03g15860 vs. ExPASy TrEMBL
Match: A0A6J1IN92 (heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita maxima OX=3661 GN=LOC111479027 PE=4 SV=1)

HSP 1 Score: 771 bits (1991), Expect = 2.91e-279
Identity = 414/482 (85.89%), Postives = 417/482 (86.51%), Query Frame = 0

Query: 1   MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNE 60
           MAD SEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPR+GTNE
Sbjct: 1   MADASEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRLGTNE 60

Query: 61  EDTFSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED 120
           ED FSGDGRNNAS ESIEKIEKSTSLLDEDDLEKHAQLL+LPPHGSEIFIGGLSRDVSED
Sbjct: 61  EDKFSGDGRNNASIESIEKIEKSTSLLDEDDLEKHAQLLSLPPHGSEIFIGGLSRDVSED 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
           DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQ+AIEDLHGKEVKGKTIRCS
Sbjct: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQQAIEDLHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK-------------------- 240
           LSDSKHRLFIGNIPKSWTEDEFRRLIEGVG GVENIELIK                    
Sbjct: 181 LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGTGVENIELIKDPQNPSRNRGFAFVLYYNNA 240

Query: 241 ---------------------------------------VKALYVKNIPENTTTEQLKEL 300
                                                  VKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSNVNFKLDGNSPTVSWADPKSMPDNSAVAQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
           FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360

Query: 361 SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM 420
           SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYG TAGFHQPVIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGFTAGFHQPVIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR 423
           QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGG AGRSGGSSSGDETNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGAAGRSGGSSSGDETNRGRRYR 480

BLAST of Cp4.1LG03g15860 vs. ExPASy TrEMBL
Match: A0A0A0L709 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118170 PE=4 SV=1)

HSP 1 Score: 739 bits (1908), Expect = 1.41e-267
Identity = 388/424 (91.51%), Postives = 402/424 (94.81%), Query Frame = 0

Query: 1   MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNE 60
           MADGSEVEERVDLEEDNYMEE+DDDVEEHVDEDGVDRR GE PE DVEEV EEP++GT+ 
Sbjct: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDTFSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED 120
           ED FS D RNN S ESIE  EKS+SLLDEDDLEKHAQLLALPPHGSE+FIGGLSRDV E+
Sbjct: 61  EDKFSDD-RNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVK-GKTIRC 180
           DLRD+CESLGEIFEIRIIKD+DSGESKGYAFI FKTKEAAQKAIEDLHGKEVK GKTIRC
Sbjct: 121 DLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180

Query: 181 SLSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIKVKALYVKNIPENTTTEQLK 240
           SLSDSKHRLFIGN+PKSWT+DEFRRLIEGVGPGVENIELIKVKALYVKNIPENTTTEQLK
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKVKALYVKNIPENTTTEQLK 240

Query: 241 ELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAK 300
           ELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAK
Sbjct: 241 ELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAK 300

Query: 301 PQSDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPA 360
           PQSDKKSDGAYSHISG  PNH+LHGGYGGYGGNPYGSLGGYGVTAGFHQP+IYGRGPMPA
Sbjct: 301 PQSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPA 360

Query: 361 GMQMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRR 420
           GMQMVPMVLPDGRIGYVLQQPGVPMPPSR RRSERSNGSGG  GRSGGSSS D+ NRGRR
Sbjct: 361 GMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRR 420

Query: 421 YRPY 423
           YRPY
Sbjct: 421 YRPY 423

BLAST of Cp4.1LG03g15860 vs. ExPASy TrEMBL
Match: A0A1S3AUX7 (heterogeneous nuclear ribonucleoprotein R isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483143 PE=4 SV=1)

HSP 1 Score: 720 bits (1858), Expect = 5.20e-259
Identity = 386/482 (80.08%), Postives = 402/482 (83.40%), Query Frame = 0

Query: 1   MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNE 60
           MAD SEVEERVDLEEDNYMEE+DDDVEEHVDEDGVDRR GE PE DVEEV EEP++GT+ 
Sbjct: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDTFSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED 120
           ED FSGDGRNN S ESIE  EKS SLLDED+LEKHAQLLALPPHGSE+FIGGLSRDV E+
Sbjct: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
           DLR++CESLGEIFEIRIIKD+DSGESKGYAFI FKTKEAAQKAIEDLHGKEVKGKTIRCS
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK-------------------- 240
           LSDSKHRLFIGN+PKSWT+DEFRRLIEGVGPGVENIELIK                    
Sbjct: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240

Query: 241 ---------------------------------------VKALYVKNIPENTTTEQLKEL 300
                                                  VKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
           FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360

Query: 361 SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM 420
           SDKKSDGAYSHISG  PNH+LHGGYGGYGGNPYGS+GGYGVTAGFHQP+IYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSIGGYGVTAGFHQPMIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR 423
           QMVPMVLPDGRIGYVLQQPGVPMPPSR RRSERSNGSGG  GRSGGSSS D+ NRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYR 480

BLAST of Cp4.1LG03g15860 vs. ExPASy TrEMBL
Match: A0A1S3AUK8 (heterogeneous nuclear ribonucleoprotein R isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483143 PE=4 SV=1)

HSP 1 Score: 715 bits (1846), Expect = 3.62e-257
Identity = 386/483 (79.92%), Postives = 402/483 (83.23%), Query Frame = 0

Query: 1   MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNE 60
           MAD SEVEERVDLEEDNYMEE+DDDVEEHVDEDGVDRR GE PE DVEEV EEP++GT+ 
Sbjct: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDTFSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED 120
           ED FSGDGRNN S ESIE  EKS SLLDED+LEKHAQLLALPPHGSE+FIGGLSRDV E+
Sbjct: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVK-GKTIRC 180
           DLR++CESLGEIFEIRIIKD+DSGESKGYAFI FKTKEAAQKAIEDLHGKEVK GKTIRC
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180

Query: 181 SLSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK------------------- 240
           SLSDSKHRLFIGN+PKSWT+DEFRRLIEGVGPGVENIELIK                   
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240

Query: 241 ----------------------------------------VKALYVKNIPENTTTEQLKE 300
                                                   VKALYVKNIPENTTTEQLKE
Sbjct: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE 300

Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
           LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP
Sbjct: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360

Query: 361 QSDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAG 420
           QSDKKSDGAYSHISG  PNH+LHGGYGGYGGNPYGS+GGYGVTAGFHQP+IYGRGPMPAG
Sbjct: 361 QSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSIGGYGVTAGFHQPMIYGRGPMPAG 420

Query: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRY 423
           MQMVPMVLPDGRIGYVLQQPGVPMPPSR RRSERSNGSGG  GRSGGSSS D+ NRGRRY
Sbjct: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRY 480

BLAST of Cp4.1LG03g15860 vs. TAIR 10
Match: AT4G00830.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 453.8 bits (1166), Expect = 1.6e-127
Identity = 265/502 (52.79%), Postives = 334/502 (66.53%), Query Frame = 0

Query: 1   MADGSEVEERVDLEEDNY-----------MEEIDDDVEEHVDEDGVDRRDGEHPEYDVEE 60
           M+D  + ++RVD EE +Y           +EE +++ EE  D+D V  ++ E  E +VE+
Sbjct: 1   MSDARDNDDRVDFEEGSYSEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAE--EREVED 60

Query: 61  VGEEPRIGTNEEDT---FSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGS 120
            G+    G + ED     + D  N+   E+ +  EK  S +D++D EK++ LL+LPPHGS
Sbjct: 61  YGDTK--GGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGS 120

Query: 121 EIFIGGLSRDVSEDDLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIED 180
           E+FIGGL RDV E+DLRDLCE +GEIFE+R++KDRDSG+SKGYAF+ FKTK+ AQKAIE+
Sbjct: 121 EVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEE 180

Query: 181 LHGKEVKGKTIRCSLSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK------ 240
           LH KE KGKTIRCSLS++K+RLFIGNIPK+WTEDEFR++IE VGPGVENIELIK      
Sbjct: 181 LHSKEFKGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTT 240

Query: 241 ------------------------------------------------------VKALYV 300
                                                                 VKALYV
Sbjct: 241 RNRGFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYV 300

Query: 301 KNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKY 360
           KNIPENT+TEQLKELFQ+HGEVTK+  PPGK G  KRDF F+HYAERSSALKAVK+TE+Y
Sbjct: 301 KNIPENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERY 360

Query: 361 EIEGQLLEVVLAKPQSDKKSD-GAYSHISGGNPNHILHGGYGGYGGNPYGSLG-GYGVTA 420
           E+ GQ LEVVLAKPQ+++K D  +YS+ +   P   +H  +GG+   PYG++G G G+  
Sbjct: 361 EVNGQPLEVVLAKPQAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAG 420

Query: 421 GFHQPVIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPM---PPSRPRRSERSNGSGGP 424
            F QP+IYGRG MP GMQMVPM+LPDGR+GYVLQQPG+PM   PP RPRR++R+NGS G 
Sbjct: 421 SFSQPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGG 480

BLAST of Cp4.1LG03g15860 vs. TAIR 10
Match: AT4G00830.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 453.8 bits (1166), Expect = 1.6e-127
Identity = 265/502 (52.79%), Postives = 334/502 (66.53%), Query Frame = 0

Query: 1   MADGSEVEERVDLEEDNY-----------MEEIDDDVEEHVDEDGVDRRDGEHPEYDVEE 60
           M+D  + ++RVD EE +Y           +EE +++ EE  D+D V  ++ E  E +VE+
Sbjct: 1   MSDARDNDDRVDFEEGSYSEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAE--EREVED 60

Query: 61  VGEEPRIGTNEEDT---FSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGS 120
            G+    G + ED     + D  N+   E+ +  EK  S +D++D EK++ LL+LPPHGS
Sbjct: 61  YGDTK--GGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGS 120

Query: 121 EIFIGGLSRDVSEDDLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIED 180
           E+FIGGL RDV E+DLRDLCE +GEIFE+R++KDRDSG+SKGYAF+ FKTK+ AQKAIE+
Sbjct: 121 EVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEE 180

Query: 181 LHGKEVKGKTIRCSLSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK------ 240
           LH KE KGKTIRCSLS++K+RLFIGNIPK+WTEDEFR++IE VGPGVENIELIK      
Sbjct: 181 LHSKEFKGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTT 240

Query: 241 ------------------------------------------------------VKALYV 300
                                                                 VKALYV
Sbjct: 241 RNRGFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYV 300

Query: 301 KNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKY 360
           KNIPENT+TEQLKELFQ+HGEVTK+  PPGK G  KRDF F+HYAERSSALKAVK+TE+Y
Sbjct: 301 KNIPENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERY 360

Query: 361 EIEGQLLEVVLAKPQSDKKSD-GAYSHISGGNPNHILHGGYGGYGGNPYGSLG-GYGVTA 420
           E+ GQ LEVVLAKPQ+++K D  +YS+ +   P   +H  +GG+   PYG++G G G+  
Sbjct: 361 EVNGQPLEVVLAKPQAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAG 420

Query: 421 GFHQPVIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPM---PPSRPRRSERSNGSGGP 424
            F QP+IYGRG MP GMQMVPM+LPDGR+GYVLQQPG+PM   PP RPRR++R+NGS G 
Sbjct: 421 SFSQPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGG 480

BLAST of Cp4.1LG03g15860 vs. TAIR 10
Match: AT4G00830.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 436.4 bits (1121), Expect = 2.6e-122
Identity = 253/472 (53.60%), Postives = 320/472 (67.80%), Query Frame = 0

Query: 12  DLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNEEDT---FSGDG 71
           D  E+  +EE +++ EE  D+D V  ++ E  E +VE+ G+    G + ED     + D 
Sbjct: 3   DEVEEEQVEEYEEEEEEDDDDDDVGNQNAE--EREVEDYGDTK--GGDMEDVQEEIAEDD 62

Query: 72  RNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSEDDLRDLCES 131
            N+   E+ +  EK  S +D++D EK++ LL+LPPHGSE+FIGGL RDV E+DLRDLCE 
Sbjct: 63  DNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIGGLPRDVGEEDLRDLCEE 122

Query: 132 LGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCSLSDSKHRL 191
           +GEIFE+R++KDRDSG+SKGYAF+ FKTK+ AQKAIE+LH KE KGKTIRCSLS++K+RL
Sbjct: 123 IGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFKGKTIRCSLSETKNRL 182

Query: 192 FIGNIPKSWTEDEFRRLIEGVGPG------------------------------VENIEL 251
           FIGNIPK+WTEDEFR++IE VGPG                                N +L
Sbjct: 183 FIGNIPKNWTEDEFRKVIEDVGPGDPTNTTRNRGFAFVLYYNNACADYSRQKMIDSNFKL 242

Query: 252 ----------------------IKVKALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPG 311
                                  +VKALYVKNIPENT+TEQLKELFQ+HGEVTK+  PPG
Sbjct: 243 EGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPENTSTEQLKELFQRHGEVTKIVTPPG 302

Query: 312 KAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQSDKKSD-GAYSHISG 371
           K G  KRDF F+HYAERSSALKAVK+TE+YE+ GQ LEVVLAKPQ+++K D  +YS+ + 
Sbjct: 303 KGG--KRDFGFVHYAERSSALKAVKDTERYEVNGQPLEVVLAKPQAERKHDPSSYSYGAA 362

Query: 372 GNPNHILHGGYGGYGGNPYGSLG-GYGVTAGFHQPVIYGRGPMPAGMQMVPMVLPDGRIG 424
             P   +H  +GG+   PYG++G G G+   F QP+IYGRG MP GMQMVPM+LPDGR+G
Sbjct: 363 PTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFSQPMIYGRGAMPTGMQMVPMLLPDGRVG 422

BLAST of Cp4.1LG03g15860 vs. TAIR 10
Match: AT4G00830.4 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 433.3 bits (1113), Expect = 2.2e-121
Identity = 261/503 (51.89%), Postives = 328/503 (65.21%), Query Frame = 0

Query: 1   MADGSEVEERVDLEEDNY-----------MEEIDDDVEEHVDEDGVDRRDGEHPEYDVEE 60
           M+D  + ++RVD EE +Y           +EE +++ EE  D+D V  ++ E  E +VE+
Sbjct: 1   MSDARDNDDRVDFEEGSYSEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAE--EREVED 60

Query: 61  VGEEPRIGTNEEDT---FSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGS 120
            G+    G + ED     + D  N+   E+ +  EK  S +D++D EK++ LL+LPPHGS
Sbjct: 61  YGDTK--GGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGS 120

Query: 121 EIFIGGLSRDVSEDDLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIED 180
           E+FIGGL RDV E+DLRDLCE +GEIFE+R++KDRDSG+SKGYAF+ FKTK+ AQKAIE+
Sbjct: 121 EVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEE 180

Query: 181 LHGKEVK-GKTIRCSLSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK----- 240
           LH KE K   T  CSLS S +RLFIGNIPK+WTEDEFR++IE VGPGVENIELIK     
Sbjct: 181 LHSKEFKASSTANCSLSLS-NRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNT 240

Query: 241 -------------------------------------------------------VKALY 300
                                                                  VKALY
Sbjct: 241 TRNRGFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALY 300

Query: 301 VKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEK 360
           VKNIPENT+TEQLKELFQ+HGEVTK+  PPGK G  KRDF F+HYAERSSALKAVK+TE+
Sbjct: 301 VKNIPENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTER 360

Query: 361 YEIEGQLLEVVLAKPQSDKKSD-GAYSHISGGNPNHILHGGYGGYGGNPYGSLG-GYGVT 420
           YE+ GQ LEVVLAKPQ+++K D  +YS+ +   P   +H  +GG+   PYG++G G G+ 
Sbjct: 361 YEVNGQPLEVVLAKPQAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIA 420

Query: 421 AGFHQPVIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPM---PPSRPRRSERSNGSGG 424
             F QP+IYGRG MP GMQMVPM+LPDGR+GYVLQQPG+PM   PP RPRR++R+NGS G
Sbjct: 421 GSFSQPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSG 480

BLAST of Cp4.1LG03g15860 vs. TAIR 10
Match: AT3G52660.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 292.7 bits (748), Expect = 4.6e-79
Identity = 180/485 (37.11%), Postives = 272/485 (56.08%), Query Frame = 0

Query: 3   DGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNEED 62
           D  E EERVDL+ DN  EEI   +EE V+ + V+  + E  E   EE+ EE  +   EE+
Sbjct: 13  DSMESEERVDLDGDNDPEEI---LEEEVEYEEVEEEEIEEIE---EEIEEEVEVEEEEEE 72

Query: 63  TFSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSEDDL 122
                             E + +  +E++ ++H +LLALPPHGSE+++GG+  D +E DL
Sbjct: 73  ------------------EDAVATEEEEEKKRHVELLALPPHGSEVYLGGIPTDATEGDL 132

Query: 123 RDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCSLS 182
           +  C S+GE+ E+RI++++DSG+ KGYAF+ F++K+ A +AI+ L+  + +GK I+CS +
Sbjct: 133 KGFCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTLNNTDFRGKRIKCSTT 192

Query: 183 DSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK---------------------- 242
            +KHRLF+GN+P++W E + ++    +GPGV+ +EL K                      
Sbjct: 193 QAKHRLFLGNVPRNWMESDIKKAANRIGPGVQIVELPKEPQNMGRNRGFAFIEYYNHACA 252

Query: 243 --------------------------------------VKALYVKNIPENTTTEQLKELF 302
                                                 VKALY+KN+P + T E+LK LF
Sbjct: 253 EYSKQKMSNPSFKLDDNAPTVSWAESRSGGGGDSSASQVKALYIKNLPRDITQERLKALF 312

Query: 303 QQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQS 362
           + HG++ KV +PP K G     + F+HYAER+S ++A+K TE+YEI+G +L+  LAKPQ+
Sbjct: 313 EHHGKILKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEIDGHMLDCTLAKPQA 372

Query: 363 DKKSD-GAYSHI--SGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPA 422
           D+K++     ++  S   PN+     Y G   +P+G+LGG+G +A + QP+++  G    
Sbjct: 373 DQKTNTNTVQNVQKSQLQPNYPPLLSY-GMAPSPFGALGGFGASA-YSQPLMHAGGHAAG 432

Query: 423 GMQMVPMVLPDGRIGYVLQQPGV-PMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGR 424
           GM M+P++LPDGRIGYVLQQPG+  MP   PR S    G  G +  SG   S D      
Sbjct: 433 GMSMMPIMLPDGRIGYVLQQPGLAAMPQPPPRHSPPYRGGSGSSSSSGSKRSSDNGRGRS 471

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9ASP62.2e-12652.79Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana OX=3702 GN=LIF... [more]
O433901.5e-2629.79Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1... [more]
O605063.4e-2629.52Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=... [more]
Q7TMK94.4e-2629.52Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE... [more]
Q7TP474.4e-2629.52Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncr... [more]
Match NameE-valueIdentityDescription
XP_023527400.12.93e-28687.76heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo] >XP_... [more]
XP_022924386.15.65e-28487.14heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita moschata] >XP_02292438... [more]
KAG6582699.15.34e-28286.51Heterogeneous nuclear ribonucleoprotein Q, partial [Cucurbita argyrosperma subsp... [more]
XP_022979240.16.00e-27985.89heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita maxima] >XP_022979242.... [more]
XP_038903519.11.37e-26180.29heterogeneous nuclear ribonucleoprotein Q isoform X2 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A0A6J1E8S52.74e-28487.14heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1IN922.91e-27985.89heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A0A0L7091.41e-26791.51Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118170 PE=4 SV=1[more]
A0A1S3AUX75.20e-25980.08heterogeneous nuclear ribonucleoprotein R isoform X2 OS=Cucumis melo OX=3656 GN=... [more]
A0A1S3AUK83.62e-25779.92heterogeneous nuclear ribonucleoprotein R isoform X1 OS=Cucumis melo OX=3656 GN=... [more]
Match NameE-valueIdentityDescription
AT4G00830.11.6e-12752.79RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT4G00830.21.6e-12752.79RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT4G00830.32.6e-12253.60RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT4G00830.42.2e-12151.89RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT3G52660.14.6e-7937.11RNA-binding (RRM/RBD/RNP motifs) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 107..180
e-value: 4.0E-27
score: 106.1
coord: 223..296
e-value: 1.1E-17
score: 74.8
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 108..178
e-value: 3.0E-21
score: 75.0
coord: 224..293
e-value: 6.2E-16
score: 58.0
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 222..300
score: 15.869082
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 106..184
score: 20.405819
IPR003954RNA recognition motif domain, eukaryoteSMARTSM00361rrm2_1coord: 107..180
e-value: 1.3E-5
score: 34.7
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 187..221
e-value: 2.8E-5
score: 26.1
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 222..342
e-value: 1.1E-21
score: 79.3
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 5..186
e-value: 4.3E-30
score: 106.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 377..423
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 391..413
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..76
NoneNo IPR availablePANTHERPTHR48024GEO13361P1-RELATEDcoord: 2..220
NoneNo IPR availablePANTHERPTHR48024GEO13361P1-RELATEDcoord: 220..421
NoneNo IPR availablePANTHERPTHR48024:SF13HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN Qcoord: 2..220
NoneNo IPR availablePANTHERPTHR48024:SF13HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN Qcoord: 220..421
NoneNo IPR availableCDDcd12251RRM3_hnRNPR_likecoord: 221..300
e-value: 2.78476E-31
score: 112.333
NoneNo IPR availableCDDcd00590RRM_SFcoord: 108..180
e-value: 3.05292E-24
score: 93.1385
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 103..214
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 220..328

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g15860.1Cp4.1LG03g15860.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding