Homology
BLAST of Cp4.1LG03g15860 vs. ExPASy Swiss-Prot
Match:
Q9ASP6 (Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana OX=3702 GN=LIF2 PE=1 SV=1)
HSP 1 Score: 453.8 bits (1166), Expect = 2.2e-126
Identity = 265/502 (52.79%), Postives = 334/502 (66.53%), Query Frame = 0
Query: 1 MADGSEVEERVDLEEDNY-----------MEEIDDDVEEHVDEDGVDRRDGEHPEYDVEE 60
M+D + ++RVD EE +Y +EE +++ EE D+D V ++ E E +VE+
Sbjct: 1 MSDARDNDDRVDFEEGSYSEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAE--EREVED 60
Query: 61 VGEEPRIGTNEEDT---FSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGS 120
G+ G + ED + D N+ E+ + EK S +D++D EK++ LL+LPPHGS
Sbjct: 61 YGDTK--GGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGS 120
Query: 121 EIFIGGLSRDVSEDDLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIED 180
E+FIGGL RDV E+DLRDLCE +GEIFE+R++KDRDSG+SKGYAF+ FKTK+ AQKAIE+
Sbjct: 121 EVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEE 180
Query: 181 LHGKEVKGKTIRCSLSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK------ 240
LH KE KGKTIRCSLS++K+RLFIGNIPK+WTEDEFR++IE VGPGVENIELIK
Sbjct: 181 LHSKEFKGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTT 240
Query: 241 ------------------------------------------------------VKALYV 300
VKALYV
Sbjct: 241 RNRGFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYV 300
Query: 301 KNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKY 360
KNIPENT+TEQLKELFQ+HGEVTK+ PPGK G KRDF F+HYAERSSALKAVK+TE+Y
Sbjct: 301 KNIPENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERY 360
Query: 361 EIEGQLLEVVLAKPQSDKKSD-GAYSHISGGNPNHILHGGYGGYGGNPYGSLG-GYGVTA 420
E+ GQ LEVVLAKPQ+++K D +YS+ + P +H +GG+ PYG++G G G+
Sbjct: 361 EVNGQPLEVVLAKPQAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAG 420
Query: 421 GFHQPVIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPM---PPSRPRRSERSNGSGGP 424
F QP+IYGRG MP GMQMVPM+LPDGR+GYVLQQPG+PM PP RPRR++R+NGS G
Sbjct: 421 SFSQPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGG 480
BLAST of Cp4.1LG03g15860 vs. ExPASy Swiss-Prot
Match:
O43390 (Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1 SV=1)
HSP 1 Score: 122.1 bits (305), Expect = 1.5e-26
Identity = 126/423 (29.79%), Postives = 184/423 (43.50%), Query Frame = 0
Query: 102 PPHGSEIFIGGLSRDVSEDDLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQ 161
P G+E+F+G + RD+ ED+L L E G I+++R++ D SG+++GYAFI F KEAAQ
Sbjct: 161 PGIGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQ 220
Query: 162 KAIEDLHGKEVK-GKTIRCSLSDSKHRLFIGNIPKSWTE----DEFRRLIEG-------- 221
+A++ E++ GK + +S + +RLF+G+IPK+ T+ +EF ++ EG
Sbjct: 221 EAVKLCDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYH 280
Query: 222 -----------------------------------VGPGVENIE------------LIKV 281
V V +E + KV
Sbjct: 281 QPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKV 340
Query: 282 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 341
K L+V+N+ T E L++ F + G++ +V +D+AF+H+ +R +A+KA+
Sbjct: 341 KVLFVRNLATTVTEEILEKSFSEFGKLERV--------KKLKDYAFVHFEDRGAAVKAMD 400
Query: 342 ETEKYEIEGQLLEVVLAKPQSDKKS--------------DGAYSHISGGNPNHI----LH 401
E EIEG+ +E+VLAKP K+ + Y H P I
Sbjct: 401 EMNGKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAYEDYYYHPPPRMPPPIRGRGRG 460
Query: 402 GGYGGYGGNP--------YGSLGGY---GVTAGFHQP--------VIYGRG--------- 418
GG GGYG P Y GY G+ P + GRG
Sbjct: 461 GGRGGYGYPPDYYGYEDYYDDYYGYDYHDYRGGYEDPYYGYDDGYAVRGRGGGRGGRGAP 520
BLAST of Cp4.1LG03g15860 vs. ExPASy Swiss-Prot
Match:
O60506 (Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=1 SV=2)
HSP 1 Score: 120.9 bits (302), Expect = 3.4e-26
Identity = 93/315 (29.52%), Postives = 150/315 (47.62%), Query Frame = 0
Query: 102 PPHGSEIFIGGLSRDVSEDDLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQ 161
P G+EIF+G + RD+ ED+L L E G I+++R++ D +G ++GYAF+ F TKEAAQ
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217
Query: 162 KAIEDLHGKEVK-GKTIRCSLSDSKHRLFIGNIPKSWTEDEF------------------ 221
+A++ + E++ GK I +S + +RLF+G+IPKS T+++
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277
Query: 222 --------------------------RRLIEG---VGPGVENIE------------LIKV 281
RRL+ G V V +E + KV
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337
Query: 282 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 341
K L+V+N+ T E L++ F Q G++ +V +D+AFIH+ ER A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKAFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 397
Query: 342 ETEKYEIEGQLLEVVLAKPQSDKKSDGAYSHISGGNPNHILHGGYGGYG---------GN 348
E ++EG+ +E+V AKP K+ + + N ++ Y YG G
Sbjct: 398 EMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQ---MYDDYYYYGPPHMPPPTRGR 457
BLAST of Cp4.1LG03g15860 vs. ExPASy Swiss-Prot
Match:
Q7TMK9 (Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=2)
HSP 1 Score: 120.6 bits (301), Expect = 4.4e-26
Identity = 93/315 (29.52%), Postives = 150/315 (47.62%), Query Frame = 0
Query: 102 PPHGSEIFIGGLSRDVSEDDLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQ 161
P G+EIF+G + RD+ ED+L L E G I+++R++ D +G ++GYAF+ F TKEAAQ
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217
Query: 162 KAIEDLHGKEVK-GKTIRCSLSDSKHRLFIGNIPKSWTEDEF------------------ 221
+A++ + E++ GK I +S + +RLF+G+IPKS T+++
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277
Query: 222 --------------------------RRLIEG---VGPGVENIE------------LIKV 281
RRL+ G V V +E + KV
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337
Query: 282 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 341
K L+V+N+ T E L++ F Q G++ +V +D+AFIH+ ER A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKSFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 397
Query: 342 ETEKYEIEGQLLEVVLAKPQSDKKSDGAYSHISGGNPNHILHGGYGGYG---------GN 348
E ++EG+ +E+V AKP K+ + + N ++ Y YG G
Sbjct: 398 EMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQ---MYDDYYYYGPPHMPPPTRGR 457
BLAST of Cp4.1LG03g15860 vs. ExPASy Swiss-Prot
Match:
Q7TP47 (Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1)
HSP 1 Score: 120.6 bits (301), Expect = 4.4e-26
Identity = 93/315 (29.52%), Postives = 150/315 (47.62%), Query Frame = 0
Query: 102 PPHGSEIFIGGLSRDVSEDDLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQ 161
P G+EIF+G + RD+ ED+L L E G I+++R++ D +G ++GYAF+ F TKEAAQ
Sbjct: 68 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 127
Query: 162 KAIEDLHGKEVK-GKTIRCSLSDSKHRLFIGNIPKSWTEDEF------------------ 221
+A++ + E++ GK I +S + +RLF+G+IPKS T+++
Sbjct: 128 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 187
Query: 222 --------------------------RRLIEG---VGPGVENIE------------LIKV 281
RRL+ G V V +E + KV
Sbjct: 188 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 247
Query: 282 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 341
K L+V+N+ T E L++ F Q G++ +V +D+AFIH+ ER A+KA++
Sbjct: 248 KVLFVRNLANTVTEEILEKSFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 307
Query: 342 ETEKYEIEGQLLEVVLAKPQSDKKSDGAYSHISGGNPNHILHGGYGGYG---------GN 348
E ++EG+ +E+V AKP K+ + + N ++ Y YG G
Sbjct: 308 EMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQ---MYDDYYYYGPPHMPPPTRGR 367
BLAST of Cp4.1LG03g15860 vs. NCBI nr
Match:
XP_023527400.1 (heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo] >XP_023527401.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo] >XP_023527402.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 790 bits (2039), Expect = 2.93e-286
Identity = 423/482 (87.76%), Postives = 423/482 (87.76%), Query Frame = 0
Query: 1 MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNE 60
MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNE
Sbjct: 1 MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNE 60
Query: 61 EDTFSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED 120
EDTFSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED
Sbjct: 61 EDTFSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED 120
Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS
Sbjct: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
Query: 181 LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK-------------------- 240
LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK
Sbjct: 181 LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
Query: 241 ---------------------------------------VKALYVKNIPENTTTEQLKEL 300
VKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSNVNFKLDGNSPTVSWADPKSMSDNSAVAQVKALYVKNIPENTTTEQLKEL 300
Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
Query: 361 SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM 420
SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM 420
Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR 423
QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR 480
BLAST of Cp4.1LG03g15860 vs. NCBI nr
Match:
XP_022924386.1 (heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita moschata] >XP_022924387.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita moschata] >XP_022924388.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita moschata] >XP_022924389.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita moschata])
HSP 1 Score: 784 bits (2024), Expect = 5.65e-284
Identity = 420/482 (87.14%), Postives = 421/482 (87.34%), Query Frame = 0
Query: 1 MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNE 60
MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTN+
Sbjct: 1 MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNQ 60
Query: 61 EDTFSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED 120
ED FSGDGRNNAS ESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED
Sbjct: 61 EDKFSGDGRNNASIESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED 120
Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS
Sbjct: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
Query: 181 LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK-------------------- 240
LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK
Sbjct: 181 LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
Query: 241 ---------------------------------------VKALYVKNIPENTTTEQLKEL 300
VKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSNVNFKLDGNSPTVSWADPKSMPDNSAVAQVKALYVKNIPENTTTEQLKEL 300
Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
Query: 361 SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM 420
SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM 420
Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR 423
QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR 480
BLAST of Cp4.1LG03g15860 vs. NCBI nr
Match:
KAG6582699.1 (Heterogeneous nuclear ribonucleoprotein Q, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 780 bits (2014), Expect = 5.34e-282
Identity = 417/482 (86.51%), Postives = 419/482 (86.93%), Query Frame = 0
Query: 1 MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNE 60
MADGSEVEERVDLEEDNYMEE+DDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNE
Sbjct: 29 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNE 88
Query: 61 EDTFSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED 120
ED FSGDGRNNAS ESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED
Sbjct: 89 EDKFSGDGRNNASIESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED 148
Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
DLRDLCE LGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS
Sbjct: 149 DLRDLCEPLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS 208
Query: 181 LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK-------------------- 240
LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK
Sbjct: 209 LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 268
Query: 241 ---------------------------------------VKALYVKNIPENTTTEQLKEL 300
VKALYVKNIPENTTTEQLKEL
Sbjct: 269 CADYSRQKMLNVNFKLDGNSPTVSWADPKSMSDNSAVAQVKALYVKNIPENTTTEQLKEL 328
Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 329 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 388
Query: 361 SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM 420
SDKKSDGAYSH+SGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM
Sbjct: 389 SDKKSDGAYSHVSGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM 448
Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR 423
QMVPMVLPDGRIGYVLQQPG PMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR
Sbjct: 449 QMVPMVLPDGRIGYVLQQPGAPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR 508
BLAST of Cp4.1LG03g15860 vs. NCBI nr
Match:
XP_022979240.1 (heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita maxima] >XP_022979242.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita maxima] >XP_022979243.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita maxima])
HSP 1 Score: 771 bits (1991), Expect = 6.00e-279
Identity = 414/482 (85.89%), Postives = 417/482 (86.51%), Query Frame = 0
Query: 1 MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNE 60
MAD SEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPR+GTNE
Sbjct: 1 MADASEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRLGTNE 60
Query: 61 EDTFSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED 120
ED FSGDGRNNAS ESIEKIEKSTSLLDEDDLEKHAQLL+LPPHGSEIFIGGLSRDVSED
Sbjct: 61 EDKFSGDGRNNASIESIEKIEKSTSLLDEDDLEKHAQLLSLPPHGSEIFIGGLSRDVSED 120
Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQ+AIEDLHGKEVKGKTIRCS
Sbjct: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQQAIEDLHGKEVKGKTIRCS 180
Query: 181 LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK-------------------- 240
LSDSKHRLFIGNIPKSWTEDEFRRLIEGVG GVENIELIK
Sbjct: 181 LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGTGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
Query: 241 ---------------------------------------VKALYVKNIPENTTTEQLKEL 300
VKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSNVNFKLDGNSPTVSWADPKSMPDNSAVAQVKALYVKNIPENTTTEQLKEL 300
Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
Query: 361 SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM 420
SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYG TAGFHQPVIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGFTAGFHQPVIYGRGPMPAGM 420
Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR 423
QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGG AGRSGGSSSGDETNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGAAGRSGGSSSGDETNRGRRYR 480
BLAST of Cp4.1LG03g15860 vs. NCBI nr
Match:
XP_038903519.1 (heterogeneous nuclear ribonucleoprotein Q isoform X2 [Benincasa hispida])
HSP 1 Score: 727 bits (1877), Expect = 1.37e-261
Identity = 387/482 (80.29%), Postives = 406/482 (84.23%), Query Frame = 0
Query: 1 MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNE 60
MADGSEVEERVDLEEDNYMEE+DDDVEEHVDEDGVDRR GEHPE DVEEVGEEP++GT+
Sbjct: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGEHPEEDVEEVGEEPQVGTDT 60
Query: 61 EDTFSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED 120
ED FSGDGRN+ S ESIE EKS SLLDEDDLEKHA+LLALPPHGSE+FIGGLSRDV E+
Sbjct: 61 EDRFSGDGRNSISIESIENREKSASLLDEDDLEKHAELLALPPHGSEVFIGGLSRDVLEE 120
Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
DLRDLCESLGEIFEIRIIKDRDSGESKGYAFI F+TKEAAQKAIEDLHGKEVKGKTIRCS
Sbjct: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFRTKEAAQKAIEDLHGKEVKGKTIRCS 180
Query: 181 LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK-------------------- 240
LSDSKHRLFIGN+PKSWT+DEF+ LIEG+GPGVENIELIK
Sbjct: 181 LSDSKHRLFIGNVPKSWTDDEFKALIEGIGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
Query: 241 ---------------------------------------VKALYVKNIPENTTTEQLKEL 300
VKALYVKNIPENT+TEQLKEL
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTSTEQLKEL 300
Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
Query: 361 SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM 420
SDKKSDGAYS++SG +PNH+LHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSYMSGSHPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM 420
Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR 423
QMVPMVLPDGRIGYV QQPGVPMPPSR RRSER+NGSGGP GRSGGSSSGDE NRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVFQQPGVPMPPSRSRRSERNNGSGGPTGRSGGSSSGDEVNRGRRYR 480
BLAST of Cp4.1LG03g15860 vs. ExPASy TrEMBL
Match:
A0A6J1E8S5 (heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita moschata OX=3662 GN=LOC111431898 PE=4 SV=1)
HSP 1 Score: 784 bits (2024), Expect = 2.74e-284
Identity = 420/482 (87.14%), Postives = 421/482 (87.34%), Query Frame = 0
Query: 1 MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNE 60
MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTN+
Sbjct: 1 MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNQ 60
Query: 61 EDTFSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED 120
ED FSGDGRNNAS ESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED
Sbjct: 61 EDKFSGDGRNNASIESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED 120
Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS
Sbjct: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
Query: 181 LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK-------------------- 240
LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK
Sbjct: 181 LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
Query: 241 ---------------------------------------VKALYVKNIPENTTTEQLKEL 300
VKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSNVNFKLDGNSPTVSWADPKSMPDNSAVAQVKALYVKNIPENTTTEQLKEL 300
Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
Query: 361 SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM 420
SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM 420
Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR 423
QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR 480
BLAST of Cp4.1LG03g15860 vs. ExPASy TrEMBL
Match:
A0A6J1IN92 (heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita maxima OX=3661 GN=LOC111479027 PE=4 SV=1)
HSP 1 Score: 771 bits (1991), Expect = 2.91e-279
Identity = 414/482 (85.89%), Postives = 417/482 (86.51%), Query Frame = 0
Query: 1 MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNE 60
MAD SEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPR+GTNE
Sbjct: 1 MADASEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRLGTNE 60
Query: 61 EDTFSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED 120
ED FSGDGRNNAS ESIEKIEKSTSLLDEDDLEKHAQLL+LPPHGSEIFIGGLSRDVSED
Sbjct: 61 EDKFSGDGRNNASIESIEKIEKSTSLLDEDDLEKHAQLLSLPPHGSEIFIGGLSRDVSED 120
Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQ+AIEDLHGKEVKGKTIRCS
Sbjct: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQQAIEDLHGKEVKGKTIRCS 180
Query: 181 LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK-------------------- 240
LSDSKHRLFIGNIPKSWTEDEFRRLIEGVG GVENIELIK
Sbjct: 181 LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGTGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
Query: 241 ---------------------------------------VKALYVKNIPENTTTEQLKEL 300
VKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSNVNFKLDGNSPTVSWADPKSMPDNSAVAQVKALYVKNIPENTTTEQLKEL 300
Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
Query: 361 SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM 420
SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYG TAGFHQPVIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGFTAGFHQPVIYGRGPMPAGM 420
Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR 423
QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGG AGRSGGSSSGDETNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGAAGRSGGSSSGDETNRGRRYR 480
BLAST of Cp4.1LG03g15860 vs. ExPASy TrEMBL
Match:
A0A0A0L709 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118170 PE=4 SV=1)
HSP 1 Score: 739 bits (1908), Expect = 1.41e-267
Identity = 388/424 (91.51%), Postives = 402/424 (94.81%), Query Frame = 0
Query: 1 MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNE 60
MADGSEVEERVDLEEDNYMEE+DDDVEEHVDEDGVDRR GE PE DVEEV EEP++GT+
Sbjct: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
Query: 61 EDTFSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED 120
ED FS D RNN S ESIE EKS+SLLDEDDLEKHAQLLALPPHGSE+FIGGLSRDV E+
Sbjct: 61 EDKFSDD-RNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVK-GKTIRC 180
DLRD+CESLGEIFEIRIIKD+DSGESKGYAFI FKTKEAAQKAIEDLHGKEVK GKTIRC
Sbjct: 121 DLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180
Query: 181 SLSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIKVKALYVKNIPENTTTEQLK 240
SLSDSKHRLFIGN+PKSWT+DEFRRLIEGVGPGVENIELIKVKALYVKNIPENTTTEQLK
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKVKALYVKNIPENTTTEQLK 240
Query: 241 ELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAK 300
ELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAK
Sbjct: 241 ELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAK 300
Query: 301 PQSDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPA 360
PQSDKKSDGAYSHISG PNH+LHGGYGGYGGNPYGSLGGYGVTAGFHQP+IYGRGPMPA
Sbjct: 301 PQSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPA 360
Query: 361 GMQMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRR 420
GMQMVPMVLPDGRIGYVLQQPGVPMPPSR RRSERSNGSGG GRSGGSSS D+ NRGRR
Sbjct: 361 GMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRR 420
Query: 421 YRPY 423
YRPY
Sbjct: 421 YRPY 423
BLAST of Cp4.1LG03g15860 vs. ExPASy TrEMBL
Match:
A0A1S3AUX7 (heterogeneous nuclear ribonucleoprotein R isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483143 PE=4 SV=1)
HSP 1 Score: 720 bits (1858), Expect = 5.20e-259
Identity = 386/482 (80.08%), Postives = 402/482 (83.40%), Query Frame = 0
Query: 1 MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNE 60
MAD SEVEERVDLEEDNYMEE+DDDVEEHVDEDGVDRR GE PE DVEEV EEP++GT+
Sbjct: 1 MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
Query: 61 EDTFSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED 120
ED FSGDGRNN S ESIE EKS SLLDED+LEKHAQLLALPPHGSE+FIGGLSRDV E+
Sbjct: 61 EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
DLR++CESLGEIFEIRIIKD+DSGESKGYAFI FKTKEAAQKAIEDLHGKEVKGKTIRCS
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
Query: 181 LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK-------------------- 240
LSDSKHRLFIGN+PKSWT+DEFRRLIEGVGPGVENIELIK
Sbjct: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240
Query: 241 ---------------------------------------VKALYVKNIPENTTTEQLKEL 300
VKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKEL 300
Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
Query: 361 SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM 420
SDKKSDGAYSHISG PNH+LHGGYGGYGGNPYGS+GGYGVTAGFHQP+IYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSIGGYGVTAGFHQPMIYGRGPMPAGM 420
Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR 423
QMVPMVLPDGRIGYVLQQPGVPMPPSR RRSERSNGSGG GRSGGSSS D+ NRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYR 480
BLAST of Cp4.1LG03g15860 vs. ExPASy TrEMBL
Match:
A0A1S3AUK8 (heterogeneous nuclear ribonucleoprotein R isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483143 PE=4 SV=1)
HSP 1 Score: 715 bits (1846), Expect = 3.62e-257
Identity = 386/483 (79.92%), Postives = 402/483 (83.23%), Query Frame = 0
Query: 1 MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNE 60
MAD SEVEERVDLEEDNYMEE+DDDVEEHVDEDGVDRR GE PE DVEEV EEP++GT+
Sbjct: 1 MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
Query: 61 EDTFSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED 120
ED FSGDGRNN S ESIE EKS SLLDED+LEKHAQLLALPPHGSE+FIGGLSRDV E+
Sbjct: 61 EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVK-GKTIRC 180
DLR++CESLGEIFEIRIIKD+DSGESKGYAFI FKTKEAAQKAIEDLHGKEVK GKTIRC
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180
Query: 181 SLSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK------------------- 240
SLSDSKHRLFIGN+PKSWT+DEFRRLIEGVGPGVENIELIK
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240
Query: 241 ----------------------------------------VKALYVKNIPENTTTEQLKE 300
VKALYVKNIPENTTTEQLKE
Sbjct: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE 300
Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP
Sbjct: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
Query: 361 QSDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAG 420
QSDKKSDGAYSHISG PNH+LHGGYGGYGGNPYGS+GGYGVTAGFHQP+IYGRGPMPAG
Sbjct: 361 QSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSIGGYGVTAGFHQPMIYGRGPMPAG 420
Query: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRY 423
MQMVPMVLPDGRIGYVLQQPGVPMPPSR RRSERSNGSGG GRSGGSSS D+ NRGRRY
Sbjct: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRY 480
BLAST of Cp4.1LG03g15860 vs. TAIR 10
Match:
AT4G00830.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 453.8 bits (1166), Expect = 1.6e-127
Identity = 265/502 (52.79%), Postives = 334/502 (66.53%), Query Frame = 0
Query: 1 MADGSEVEERVDLEEDNY-----------MEEIDDDVEEHVDEDGVDRRDGEHPEYDVEE 60
M+D + ++RVD EE +Y +EE +++ EE D+D V ++ E E +VE+
Sbjct: 1 MSDARDNDDRVDFEEGSYSEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAE--EREVED 60
Query: 61 VGEEPRIGTNEEDT---FSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGS 120
G+ G + ED + D N+ E+ + EK S +D++D EK++ LL+LPPHGS
Sbjct: 61 YGDTK--GGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGS 120
Query: 121 EIFIGGLSRDVSEDDLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIED 180
E+FIGGL RDV E+DLRDLCE +GEIFE+R++KDRDSG+SKGYAF+ FKTK+ AQKAIE+
Sbjct: 121 EVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEE 180
Query: 181 LHGKEVKGKTIRCSLSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK------ 240
LH KE KGKTIRCSLS++K+RLFIGNIPK+WTEDEFR++IE VGPGVENIELIK
Sbjct: 181 LHSKEFKGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTT 240
Query: 241 ------------------------------------------------------VKALYV 300
VKALYV
Sbjct: 241 RNRGFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYV 300
Query: 301 KNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKY 360
KNIPENT+TEQLKELFQ+HGEVTK+ PPGK G KRDF F+HYAERSSALKAVK+TE+Y
Sbjct: 301 KNIPENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERY 360
Query: 361 EIEGQLLEVVLAKPQSDKKSD-GAYSHISGGNPNHILHGGYGGYGGNPYGSLG-GYGVTA 420
E+ GQ LEVVLAKPQ+++K D +YS+ + P +H +GG+ PYG++G G G+
Sbjct: 361 EVNGQPLEVVLAKPQAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAG 420
Query: 421 GFHQPVIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPM---PPSRPRRSERSNGSGGP 424
F QP+IYGRG MP GMQMVPM+LPDGR+GYVLQQPG+PM PP RPRR++R+NGS G
Sbjct: 421 SFSQPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGG 480
BLAST of Cp4.1LG03g15860 vs. TAIR 10
Match:
AT4G00830.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 453.8 bits (1166), Expect = 1.6e-127
Identity = 265/502 (52.79%), Postives = 334/502 (66.53%), Query Frame = 0
Query: 1 MADGSEVEERVDLEEDNY-----------MEEIDDDVEEHVDEDGVDRRDGEHPEYDVEE 60
M+D + ++RVD EE +Y +EE +++ EE D+D V ++ E E +VE+
Sbjct: 1 MSDARDNDDRVDFEEGSYSEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAE--EREVED 60
Query: 61 VGEEPRIGTNEEDT---FSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGS 120
G+ G + ED + D N+ E+ + EK S +D++D EK++ LL+LPPHGS
Sbjct: 61 YGDTK--GGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGS 120
Query: 121 EIFIGGLSRDVSEDDLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIED 180
E+FIGGL RDV E+DLRDLCE +GEIFE+R++KDRDSG+SKGYAF+ FKTK+ AQKAIE+
Sbjct: 121 EVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEE 180
Query: 181 LHGKEVKGKTIRCSLSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK------ 240
LH KE KGKTIRCSLS++K+RLFIGNIPK+WTEDEFR++IE VGPGVENIELIK
Sbjct: 181 LHSKEFKGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTT 240
Query: 241 ------------------------------------------------------VKALYV 300
VKALYV
Sbjct: 241 RNRGFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYV 300
Query: 301 KNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKY 360
KNIPENT+TEQLKELFQ+HGEVTK+ PPGK G KRDF F+HYAERSSALKAVK+TE+Y
Sbjct: 301 KNIPENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERY 360
Query: 361 EIEGQLLEVVLAKPQSDKKSD-GAYSHISGGNPNHILHGGYGGYGGNPYGSLG-GYGVTA 420
E+ GQ LEVVLAKPQ+++K D +YS+ + P +H +GG+ PYG++G G G+
Sbjct: 361 EVNGQPLEVVLAKPQAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAG 420
Query: 421 GFHQPVIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPM---PPSRPRRSERSNGSGGP 424
F QP+IYGRG MP GMQMVPM+LPDGR+GYVLQQPG+PM PP RPRR++R+NGS G
Sbjct: 421 SFSQPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGG 480
BLAST of Cp4.1LG03g15860 vs. TAIR 10
Match:
AT4G00830.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 436.4 bits (1121), Expect = 2.6e-122
Identity = 253/472 (53.60%), Postives = 320/472 (67.80%), Query Frame = 0
Query: 12 DLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNEEDT---FSGDG 71
D E+ +EE +++ EE D+D V ++ E E +VE+ G+ G + ED + D
Sbjct: 3 DEVEEEQVEEYEEEEEEDDDDDDVGNQNAE--EREVEDYGDTK--GGDMEDVQEEIAEDD 62
Query: 72 RNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSEDDLRDLCES 131
N+ E+ + EK S +D++D EK++ LL+LPPHGSE+FIGGL RDV E+DLRDLCE
Sbjct: 63 DNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIGGLPRDVGEEDLRDLCEE 122
Query: 132 LGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCSLSDSKHRL 191
+GEIFE+R++KDRDSG+SKGYAF+ FKTK+ AQKAIE+LH KE KGKTIRCSLS++K+RL
Sbjct: 123 IGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFKGKTIRCSLSETKNRL 182
Query: 192 FIGNIPKSWTEDEFRRLIEGVGPG------------------------------VENIEL 251
FIGNIPK+WTEDEFR++IE VGPG N +L
Sbjct: 183 FIGNIPKNWTEDEFRKVIEDVGPGDPTNTTRNRGFAFVLYYNNACADYSRQKMIDSNFKL 242
Query: 252 ----------------------IKVKALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPG 311
+VKALYVKNIPENT+TEQLKELFQ+HGEVTK+ PPG
Sbjct: 243 EGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPENTSTEQLKELFQRHGEVTKIVTPPG 302
Query: 312 KAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQSDKKSD-GAYSHISG 371
K G KRDF F+HYAERSSALKAVK+TE+YE+ GQ LEVVLAKPQ+++K D +YS+ +
Sbjct: 303 KGG--KRDFGFVHYAERSSALKAVKDTERYEVNGQPLEVVLAKPQAERKHDPSSYSYGAA 362
Query: 372 GNPNHILHGGYGGYGGNPYGSLG-GYGVTAGFHQPVIYGRGPMPAGMQMVPMVLPDGRIG 424
P +H +GG+ PYG++G G G+ F QP+IYGRG MP GMQMVPM+LPDGR+G
Sbjct: 363 PTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFSQPMIYGRGAMPTGMQMVPMLLPDGRVG 422
BLAST of Cp4.1LG03g15860 vs. TAIR 10
Match:
AT4G00830.4 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 433.3 bits (1113), Expect = 2.2e-121
Identity = 261/503 (51.89%), Postives = 328/503 (65.21%), Query Frame = 0
Query: 1 MADGSEVEERVDLEEDNY-----------MEEIDDDVEEHVDEDGVDRRDGEHPEYDVEE 60
M+D + ++RVD EE +Y +EE +++ EE D+D V ++ E E +VE+
Sbjct: 1 MSDARDNDDRVDFEEGSYSEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAE--EREVED 60
Query: 61 VGEEPRIGTNEEDT---FSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGS 120
G+ G + ED + D N+ E+ + EK S +D++D EK++ LL+LPPHGS
Sbjct: 61 YGDTK--GGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGS 120
Query: 121 EIFIGGLSRDVSEDDLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIED 180
E+FIGGL RDV E+DLRDLCE +GEIFE+R++KDRDSG+SKGYAF+ FKTK+ AQKAIE+
Sbjct: 121 EVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEE 180
Query: 181 LHGKEVK-GKTIRCSLSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK----- 240
LH KE K T CSLS S +RLFIGNIPK+WTEDEFR++IE VGPGVENIELIK
Sbjct: 181 LHSKEFKASSTANCSLSLS-NRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNT 240
Query: 241 -------------------------------------------------------VKALY 300
VKALY
Sbjct: 241 TRNRGFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALY 300
Query: 301 VKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEK 360
VKNIPENT+TEQLKELFQ+HGEVTK+ PPGK G KRDF F+HYAERSSALKAVK+TE+
Sbjct: 301 VKNIPENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTER 360
Query: 361 YEIEGQLLEVVLAKPQSDKKSD-GAYSHISGGNPNHILHGGYGGYGGNPYGSLG-GYGVT 420
YE+ GQ LEVVLAKPQ+++K D +YS+ + P +H +GG+ PYG++G G G+
Sbjct: 361 YEVNGQPLEVVLAKPQAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIA 420
Query: 421 AGFHQPVIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPM---PPSRPRRSERSNGSGG 424
F QP+IYGRG MP GMQMVPM+LPDGR+GYVLQQPG+PM PP RPRR++R+NGS G
Sbjct: 421 GSFSQPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSG 480
BLAST of Cp4.1LG03g15860 vs. TAIR 10
Match:
AT3G52660.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 292.7 bits (748), Expect = 4.6e-79
Identity = 180/485 (37.11%), Postives = 272/485 (56.08%), Query Frame = 0
Query: 3 DGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNEED 62
D E EERVDL+ DN EEI +EE V+ + V+ + E E EE+ EE + EE+
Sbjct: 13 DSMESEERVDLDGDNDPEEI---LEEEVEYEEVEEEEIEEIE---EEIEEEVEVEEEEEE 72
Query: 63 TFSGDGRNNASTESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSEDDL 122
E + + +E++ ++H +LLALPPHGSE+++GG+ D +E DL
Sbjct: 73 ------------------EDAVATEEEEEKKRHVELLALPPHGSEVYLGGIPTDATEGDL 132
Query: 123 RDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCSLS 182
+ C S+GE+ E+RI++++DSG+ KGYAF+ F++K+ A +AI+ L+ + +GK I+CS +
Sbjct: 133 KGFCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTLNNTDFRGKRIKCSTT 192
Query: 183 DSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIK---------------------- 242
+KHRLF+GN+P++W E + ++ +GPGV+ +EL K
Sbjct: 193 QAKHRLFLGNVPRNWMESDIKKAANRIGPGVQIVELPKEPQNMGRNRGFAFIEYYNHACA 252
Query: 243 --------------------------------------VKALYVKNIPENTTTEQLKELF 302
VKALY+KN+P + T E+LK LF
Sbjct: 253 EYSKQKMSNPSFKLDDNAPTVSWAESRSGGGGDSSASQVKALYIKNLPRDITQERLKALF 312
Query: 303 QQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQS 362
+ HG++ KV +PP K G + F+HYAER+S ++A+K TE+YEI+G +L+ LAKPQ+
Sbjct: 313 EHHGKILKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEIDGHMLDCTLAKPQA 372
Query: 363 DKKSD-GAYSHI--SGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPA 422
D+K++ ++ S PN+ Y G +P+G+LGG+G +A + QP+++ G
Sbjct: 373 DQKTNTNTVQNVQKSQLQPNYPPLLSY-GMAPSPFGALGGFGASA-YSQPLMHAGGHAAG 432
Query: 423 GMQMVPMVLPDGRIGYVLQQPGV-PMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGR 424
GM M+P++LPDGRIGYVLQQPG+ MP PR S G G + SG S D
Sbjct: 433 GMSMMPIMLPDGRIGYVLQQPGLAAMPQPPPRHSPPYRGGSGSSSSSGSKRSSDNGRGRS 471
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9ASP6 | 2.2e-126 | 52.79 | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana OX=3702 GN=LIF... | [more] |
O43390 | 1.5e-26 | 29.79 | Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1... | [more] |
O60506 | 3.4e-26 | 29.52 | Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=... | [more] |
Q7TMK9 | 4.4e-26 | 29.52 | Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE... | [more] |
Q7TP47 | 4.4e-26 | 29.52 | Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncr... | [more] |
Match Name | E-value | Identity | Description | |
XP_023527400.1 | 2.93e-286 | 87.76 | heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo] >XP_... | [more] |
XP_022924386.1 | 5.65e-284 | 87.14 | heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita moschata] >XP_02292438... | [more] |
KAG6582699.1 | 5.34e-282 | 86.51 | Heterogeneous nuclear ribonucleoprotein Q, partial [Cucurbita argyrosperma subsp... | [more] |
XP_022979240.1 | 6.00e-279 | 85.89 | heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita maxima] >XP_022979242.... | [more] |
XP_038903519.1 | 1.37e-261 | 80.29 | heterogeneous nuclear ribonucleoprotein Q isoform X2 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1E8S5 | 2.74e-284 | 87.14 | heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita moschata OX=3662 GN=... | [more] |
A0A6J1IN92 | 2.91e-279 | 85.89 | heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita maxima OX=3661 GN=LO... | [more] |
A0A0A0L709 | 1.41e-267 | 91.51 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118170 PE=4 SV=1 | [more] |
A0A1S3AUX7 | 5.20e-259 | 80.08 | heterogeneous nuclear ribonucleoprotein R isoform X2 OS=Cucumis melo OX=3656 GN=... | [more] |
A0A1S3AUK8 | 3.62e-257 | 79.92 | heterogeneous nuclear ribonucleoprotein R isoform X1 OS=Cucumis melo OX=3656 GN=... | [more] |
Match Name | E-value | Identity | Description | |
AT4G00830.1 | 1.6e-127 | 52.79 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT4G00830.2 | 1.6e-127 | 52.79 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT4G00830.3 | 2.6e-122 | 53.60 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT4G00830.4 | 2.2e-121 | 51.89 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT3G52660.1 | 4.6e-79 | 37.11 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |