Cp4.1LG03g13850 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG03g13850
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	cytochrome c oxidase subunit 5b-1, mitochondrial-like
Location	Cp4.1LG03: 9229484 .. 9235808 (+)
RNA-Seq Expression	Cp4.1LG03g13850
Synteny	Cp4.1LG03g13850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCCCCCATCCATCGCTTCTTACTCTTGACCAGTTCCGCGTTTCTCCTATTTCCAAAAGCATAGAAACTGAAGAGCAAGAGAGTGAAGAAAGGAAGAGCCAAATTCGCCGTCCTAGGGGTGCGACCTGAGATCATAGTCGGAGAAATCACCGATTTCAATCTACGATGTGGAGGAGATTGCTCGCTTCGCAGCTCAAATCCCTCAAATCTCTTCCCTCATCATCGACGCCCGCATCCGCTCCGTTAGGATGCATTTCCAAAGCCACTCGACTCGGTGCTGCTTCTCATGTTTCTCCTTCCGCGCCTGTCTCGCTCTTCGCTCGCTATTACGCCTCTGATTCTGGTAGATCTTGCTGTTTTATTTTGATTTTATAGTATGTCTCTGTATGTATGAAGAATCTATGATACGATTGCGAATCTGGAATTGGTCGTTTGGTTGTTAATCGATTAGAATGTATACGCGTTGAATGTTATGTATTGTACAGTCTGTGTCACTGTATGTGTGAATCTACTATTGGTCTCGTGGTTATTTATTAATTAGAATGTATACTCGTGGATTGTTAGTGTTTTACAGTCTGTTTCGCTGTATGTGTGAATCTATAATATGAGCACGAATGTGGTCATGATGTCCTGTGTTTAAATTTATTTTTTTAGCTGGTACTGGTGTGAAGAAGGTAGAGGATGTAATGCCAATCGCAACCGGACACGAGCGTGAAGAGCTTGAAGCTTCGCTTCAGGTGAAATTTATTGTATTTCTTGATTACCTGGATCTCTTTCCGCTGCGGGTTCCTTTCCCCCACCCCATTTTATGATGTGAAATCTACCGGACTAAGGAATAGTTTAAAATTTATACCTTAATTTATCTATTCATTTTCATTTTCGAACCGAGTCTGGTATTGTAATTTTCAGTTTCGGAAAGGCAGGTCAAAATATATAGATTCATTGATCGATTCATTTTCATTTTCAAACTCTCTGGCTTATGTTAATATTTTGATAGGCTGGCCTCTGATGGATGTATTTCTCATTTGGATGTGAGTCTCATTTCGGTTCGGTTAACCTTTGCAGGGAAAGGACATCCTTGACATAAACCATCCTGTTGGCCCTTTTGGAACTAAGGTTGGTGTAGTTTGCGATTAATTTTATCTTCTCTTGTTTTCGTTTGTTGGAAGTAACTCAGATGCTTTAGCTTTTATCAAGGTTCATTCCATGTAGCTTTCAAGGCATGACGAGACAGCAATATTTAATGAGTTTATTACTTTCACTTGAATTTAAGCTGCAGTTTTGTTATGCTATCAGGATATCTTCTCTGGTTAAAATATTTCATTGAGGTCTCAGACACCCAAGATATTTGAAAAGTGATTGTTCTGAATTTTTGTTTCCAGTCCTTTTTCCTTTTCCTCTTCTGATTATCCATTCCATATATTTCTTTCATGCTCCATGGCATATCATAACTTAATATTGCAGTATAATTAACAATACCTAGGAAAGTTCTATTTTCTTTTAAAATATTTTTTAAGAATCCAAGCTTTGATTCAGAAGAATGAAAGAAAGAACATATAAAAGCAAACAGTAAAAGAAAGAACATTAAGACCATACAAACAAGCTATGTCCACAAAGAAAAAAACTCCAATTCAAAATAATCAAATAAAGCAAATTATACAGATAGGTCAAGGAACAGGACACTAAGATAAGGAGTTCTTTCCTCTTTATCGAACGGAAAATCTCCCCAACTGGTTTGAATTAGGAAAGAAGTTAAAATGCTAAATGCTATGACTTTGTGCTACATTTAGAAGCAAGAAAATATGCAAGTTCCTTAATATCTGTCTCATCTCTAACATTCTCTCTAAGATTTTATTGTTCTGCACTAGCCTGCTAACCTAAATCAAATCTGGAGAATAAAGTCATTCAAAGAATTTTAGGCTTCCTTTTAAGGCTATAACCAACAATCTTAGGCTTCCTTTTGCATCTTGAATCAAGTCTGTTCCTTTTGAACCATTTTAATTTTGTCTGGTTTAGGTGGTTTTTTGTTTTGGAAAGTTAAACGCTTGTGGTTGGCTGCAAAAACCGTCTCTTTTGTTTCCTTTCTCTGAAGTCTGAACTTTAAACTGTTGATCAATTGTGTCAAAGCACATGAATTGGCGCTTGAAATTCTCAGTGTTGTGATCTTTCCATAATTTTTGGGTCAGTTCCTCCTTCACTTCGATGTTTTTTCGGGTACTTCAAAAGATATGCAATCTCTCTGTAGTTTGGATATGCTTTGAAGATAACCAATCAATGACAGAATGCCTTTTCATTTTGGATATGTTAGTTTCAACTCGTTGTGCAGTTTGATTAGAAAATTTTCAACTCAATTTGTAACTAGTCAATGGCGGAATGCCTTTTGGTTTTGGACATATCAGTTTCAACTGTTTGCACAATTTGGTTAGAAACTTTTCACCTCGTTTGGAAGTTAATTTTGTAATTGGACAGTTGTTTGAGGAAATAATCTTATCATATCTTGTTGTTTTAAGAATGTGTCAAGAAGTGGCCACATCGGTTGAGGGGCCTGGGTGTCAAACCTTAGCTCAGACCTTTGGTTGAAAGACTTCTCCTTAGTGTCTTTAAAAGTTGGAATATAAGTGCATGAAGTAAGGTTTCTCTCCTAATCTTTGATGCACCAAGATTAGCATATAGAATCCTTAACATTAAAGGGTGAATGAAACTGAAGTCGAGAGTTCGGAAAACTCTCTGACTGAAGCACCAATACTCAATTTACATTAAAAAAAATGTCCGGAAAACTCTACCTATCTGTTGGATCGTTATGACAACCCTAGAAGGGGGTGAATAGGGTGTAAAAAAAAAATATTTTAGTCTGCTTAATTTTACAAATGATCACACTTTTTTAGAGCAATTAAAAATGTCAATTAACACGAGAAGTACAAAAATAATAATACGATTCAAAACAATAAAAAATTATGAAAAACTTAGTGATTGAAAAGGCATAACAAACAAAAATTATGCTTAATTTTTGTTTTAGTCATAACTTCTTCGTTTTAGCTCCAATTGAGTTATTCCAAAGGTGTTGGAATCGTTATTCCAAGCTCTACACTATGGACACTTCAAAACACTAAAATTATTAGTAATTAGGAGCATGTTATCATCAAAATATTAATTAATTAATTTGAGATTTAGAGCCGAAAAGTCAACACCATTGTCAATTAGAGATGGAACAGTTCAAGAAGAGGTTTAGTGGATTTTCCATCTTTTTTTCTGGAAAGAATGGTTACATTGTTTAAAACAAAGAGGAGAGATCCTTCTCTAAACACAATCATATTGTATACCCTTGGAAGAAAGCTGACTAAAGATATACCTTGCAATTTTTAGGAAGTTTGGGTCTGCAAAACCTTTTTTATATAACTCCAAGATAATAGAGGGTTTTTTTATAATAAACAGAGGGAACTGAAAAGGCACTTGAATTGGAAGTTTGAACTCTTGGAATCCTGGTTTAAGGAGACATGAAGACCGTTCAACATGATAATAAGAATGATTCTCTCTTCGACTTCTCTATGTTGCTGTTCTTTCTGTTATCTTGAAATGCAACTTTTGATAATGAATAAAGATTAGCCTCATCCTGTAAGTCTTAATTCAACGATACAACCGCCTACATTGCACTGAAGGTAGTGTTTATGTCATAAGCTATTCTACCAAATACCCTACCAAAATCTGACTGAAGCACTCTTACCCAATTGGAACAAGAGACTTGTAATTATTTAGCACTAGAGCAAGCTTATGACTGTCGTCCACCATCATGGGCCTTTAGTGGAAGAATAGGAGCATCCCTTTATGAATTGCCTATTGCACTGCTTCATATTTGCGACCAATCACTATCTGCCAAATATCTTCCCTGGGAGATTTTCATAACCAATTGTGAGGAAGGTTAATGTTTTTCCTTTTGATATTTGTTATGTTTAAACCTTCATTCATAAGAGTGACCAGTGACCACATCAATCTAACTAGGTGATTACTCCTTTAGTCATTGGAACCTTCCCAAAAGGAATTCCTTATGTCTTTCTCTAAAATTCCATCTCTTCAGAGGGAATGTGTTAGAGACTGAAAGAAAGTATTAAGGGAGGTTGGTGAGGATTTTCTTTTTCTTTATCAAAAGATGTCTTGTTGTCTCTCCTATCTCGACAGGCACAATAATTCTTCAGTTAATATAATTGTTGTTTTCTATGAGGCCATTGATGATATCTGGTTAACATCACTGAAGGTTGAAGAGACTGAGAACTCCAGCAGATTTTCTTTGCGAAATTACCATGAATATAAATGCCTTGATTTTCACTATCCTGCTGATAGAACATCAACTTTGGAGAAAGAAATTTTAGGATGAGGAATCTTCTCCCTTCCCAATATTTTATTGTCTTGTTTCTCATTTGAAAATAGTGTTGTTTTAGTGCATCTGTGATACAGTATGCTAAGCAGATCTATGGTGCATTGCTGCCATCTAAGTGGGGTTTTGCTGAGGTTCCTCCCTTGTTATTAAATTTCTGTTTAGTTCGTACAAGTCTATGACTTTGACTATTCACTTTTATGTTCTTATAAATAAAAAAAACACTTTCATGTAGTTATTGATTTCCTGATCAGTTTTGTAATTATCTAAGGCTTTTCTTTTCTTCTATATGAGAAAAGGCTGTAACTTTCTTTGCGTTTTATGGGGTATGTGCTTCACACGTAGAAATACTGTGTTAGGGTATGTGAATGAAAGAGAGATTTTCTTGCATGACTTATTTCTGGGAGAAATCTTATACTTTTTATTTCTTTAGGAAGCACCTGCAGTTATCAAGTCATATTATGATGAAAGATTAGTTGGATGTCCTGGAGGTGAAGGCGGTGGGTACTCGCAATCTCTCCTTTTCCATGCTTTTTCATAATTTTTGTGCGAGTCTGACAAAATGTTACATAGGCAAATTCTGTGTTCTTCTATTACACATAAGAATTTCAATCTTCTGATGCATACTTTTCAATTGTAGAGGATGAGCATGATGTTGTCTGGTTTCGGCTGAGGAAAGACGTGCCACATGAATGCCCTGTGTGCTCACAGTACTTTGTGGTGAGTATTTATTTTAATTTATTATGTTTTGTTGACATGGTAGAAAGCTGGATATTTTTCCCCATTGTGGGTGGGTGGGGGCAAACTCTGCAACCTTACCTAATTTTCACGATAGTAAAAGGTTGGCATTCTTCAACCAGCATATGCCGAAGTATAGCTCCATTGGAAGGAAAGGACACAATAGTGAAAATACTAAAATGTCAATACCATAACTGTGAAAAGTGTTTTTTAACTAATCTTGCAAATAGTTTTCAATTTCTTTTTTGATATTTGTTGCCCACTTAACCAAAAATGCTTAGATCGAAAGATTGTTTTTTTGAGAAATAAATTATTGAAATATTTTCATATGCGCATGCGCGCACACATATATATATGTACAAGTGTTCCACTAGTAAACCTACTCTAATATGGCCTTGCAACAATAGGGATTAGAATCTCTCTATCTGTCTCTCTTCCATGTTATCCCACTTTCTCCTTTGATGGAATGGGCTATTGGTGTCTAAAATTACTTAGCAGAATTTTCCTAATCGTAACTTGTGTTCGCAGCTGGAAGTGGTGGGACCTGGAGGATCGCCGGATGGTTTTGGAGATGATGACCACCACCATTGATTGCAAGCATGCCCTTCTCGAAAATAAACCTTTGGCTTTTAGAAGAGACAAATCCCACAATATGCTGCAGTTCTTATTTAAAGCTGTGTTTTGTTTGTTTTCTGATGGTCCTTGTTTTTTTTGTTCTCCTTCAGCAACAAAGGGAATCTTAGTTGTTTCCGAGTCAGTTAGACATTGGCAAGTCATCTGCTAGAAGTTCGGGTTGCTTTTTCTTTTTTAGCTTTTCTTCTATGCATATCCAAATAATTGGAGGCATTTCAATTCTTTTCTATTACCTTCCAACCAAACCCATTAATCCTGGAAAGTTATTTCAAGAACTTCCAAAAAATAAATTGATTCAGGAACCGTTAAATGGCTGTATGGGAGTGGGTTTAGGTAAAATTCCTTGCCACTTCTATTGCAAATCTTAAACTTTTCATACTTGCCCATTGATCTTCTTGATGTTATTATGGTGCATCAAAGTCCTCTTATGATTCTCTTAGAGAACTTTGTGATGCTGTCGCGTAGTTGGGACTAAGGAGATGAAGAAACTATTAGCCAATATAATGAACAGGAGAAGTCCCAAGTCATCTGATTCTTTTGGTGTTGAAAAATGTATGTTGAACTTTCTGGATAAAAATCAATCAA

mRNA sequence

TGCCCCCATCCATCGCTTCTTACTCTTGACCAGTTCCGCGTTTCTCCTATTTCCAAAAGCATAGAAACTGAAGAGCAAGAGAGTGAAGAAAGGAAGAGCCAAATTCGCCGTCCTAGGGGTGCGACCTGAGATCATAGTCGGAGAAATCACCGATTTCAATCTACGATGTGGAGGAGATTGCTCGCTTCGCAGCTCAAATCCCTCAAATCTCTTCCCTCATCATCGACGCCCGCATCCGCTCCGTTAGGATGCATTTCCAAAGCCACTCGACTCGGTGCTGCTTCTCATGTTTCTCCTTCCGCGCCTGTCTCGCTCTTCGCTCGCTATTACGCCTCTGATTCTGCTGGTACTGGTGTGAAGAAGGTAGAGGATGTAATGCCAATCGCAACCGGACACGAGCGTGAAGAGCTTGAAGCTTCGCTTCAGGGAAAGGACATCCTTGACATAAACCATCCTGTTGGCCCTTTTGGAACTAAGGAAGCACCTGCAGTTATCAAGTCATATTATGATGAAAGATTAGTTGGATGTCCTGGAGGTGAAGGCGAGGATGAGCATGATGTTGTCTGGTTTCGGCTGAGGAAAGACGTGCCACATGAATGCCCTGTGTGCTCACAGTACTTTGTGCTGGAAGTGGTGGGACCTGGAGGATCGCCGGATGGTTTTGGAGATGATGACCACCACCATTGATTGCAAGCATGCCCTTCTCGAAAATAAACCTTTGGCTTTTAGAAGAGACAAATCCCACAATATGCTGCAGTTCTTATTTAAAGCTGTGTTTTGTTTGTTTTCTGATGGTCCTTGTTTTTTTTGTTCTCCTTCAGCAACAAAGGGAATCTTAGTTGTTTCCGAGTCAGTTAGACATTGGCAAGTCATCTGCTAGAAGTTCGGGTTGCTTTTTCTTTTTTAGCTTTTCTTCTATGCATATCCAAATAATTGGAGGCATTTCAATTCTTTTCTATTACCTTCCAACCAAACCCATTAATCCTGGAAAGTTATTTCAAGAACTTCCAAAAAATAAATTGATTCAGGAACCGTTAAATGGCTGTATGGGAGTGGGTTTAGGTAAAATTCCTTGCCACTTCTATTGCAAATCTTAAACTTTTCATACTTGCCCATTGATCTTCTTGATGTTATTATGGTGCATCAAAGTCCTCTTATGATTCTCTTAGAGAACTTTGTGATGCTGTCGCGTAGTTGGGACTAAGGAGATGAAGAAACTATTAGCCAATATAATGAACAGGAGAAGTCCCAAGTCATCTGATTCTTTTGGTGTTGAAAAATGTATGTTGAACTTTCTGGATAAAAATCAATCAA

Coding sequence (CDS)

ATGTGGAGGAGATTGCTCGCTTCGCAGCTCAAATCCCTCAAATCTCTTCCCTCATCATCGACGCCCGCATCCGCTCCGTTAGGATGCATTTCCAAAGCCACTCGACTCGGTGCTGCTTCTCATGTTTCTCCTTCCGCGCCTGTCTCGCTCTTCGCTCGCTATTACGCCTCTGATTCTGCTGGTACTGGTGTGAAGAAGGTAGAGGATGTAATGCCAATCGCAACCGGACACGAGCGTGAAGAGCTTGAAGCTTCGCTTCAGGGAAAGGACATCCTTGACATAAACCATCCTGTTGGCCCTTTTGGAACTAAGGAAGCACCTGCAGTTATCAAGTCATATTATGATGAAAGATTAGTTGGATGTCCTGGAGGTGAAGGCGAGGATGAGCATGATGTTGTCTGGTTTCGGCTGAGGAAAGACGTGCCACATGAATGCCCTGTGTGCTCACAGTACTTTGTGCTGGAAGTGGTGGGACCTGGAGGATCGCCGGATGGTTTTGGAGATGATGACCACCACCATTGA

Protein sequence

MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSAGTGVKKVEDVMPIATGHEREELEASLQGKDILDINHPVGPFGTKEAPAVIKSYYDERLVGCPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH

Homology

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BLAST of Cp4.1LG03g13850 vs. ExPASy Swiss-Prot
Match: Q9LW15 (Cytochrome c oxidase subunit 5b-1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=COX5B-1 PE=1 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.5e-52
Identity = 108/180 (60.00%), Postives = 134/180 (74.44%), Query Frame = 0


Query: 1   MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATR-LG---AASHVSPSAPVSLFARYYA 60
           MWRR+++SQLK+L    ++   A++P   I+  TR +G   AA+  + SA   +  R ++
Sbjct: 1   MWRRIVSSQLKTL----AADVVAASPRRSIAATTRPVGFYLAANRSAISASSFVIPRRFS 60

Query: 61  SDSAGT-GVKKVEDVMPIATGHEREELEASLQGKDILDINHPVGPFGTKEAPAVIKSYYD 120
           SDS  T   KKVEDVMPIATGHE+EELEA L+G+ + DI+ P GPFGTKEAPA++KSYYD
Sbjct: 61  SDSVETPATKKVEDVMPIATGHEKEELEAELEGRRLDDIDFPEGPFGTKEAPAIVKSYYD 120

Query: 121 ERLVGCPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFG--DDDHHH 174
           +R+VGCPGGEGEDEHDVVWF L K    ECPVC+QYF LEVVGPGG PDG G  DD+HHH
Sbjct: 121 KRIVGCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFELEVVGPGGPPDGHGDEDDEHHH 176

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BLAST of Cp4.1LG03g13850 vs. ExPASy Swiss-Prot
Match: Q9SSB8 (Cytochrome c oxidase subunit 5b-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=COX5B-2 PE=1 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 7.3e-52
Identity = 103/173 (59.54%), Postives = 128/173 (73.99%), Query Frame = 0


Query: 1   MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATRLGAASHVSP-SAPVSLFARYYASDS 60
           MWRR+++S LKS+ ++ S + P+      + ++T L  ++  S   A  S+F+R   S +
Sbjct: 1   MWRRIVSSHLKSISAVGSCAAPSCR--HAVVESTHLSLSTRASSIPAYSSIFSRLIGSAA 60

Query: 61  AGTGVKK-VEDVMPIATGHEREELEASLQGKDILDINHPVGPFGTKEAPAVIKSYYDERL 120
           A T VKK VEDVMPIATGHE+EEL+A L+G+ + DI+ P GPFGTKEAPAV+KSYYD R+
Sbjct: 61  ADTAVKKRVEDVMPIATGHEKEELQAELEGRKLDDIDFPEGPFGTKEAPAVVKSYYDMRI 120

Query: 121 VGCPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDH 172
           VGCPGGEGEDEHDVVWF L K    ECPVC+QYF LEVVGPGG PDG GDD H
Sbjct: 121 VGCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFKLEVVGPGGPPDGHGDDHH 171

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BLAST of Cp4.1LG03g13850 vs. ExPASy Swiss-Prot
Match: Q9SSS5 (Putative cytochrome c oxidase subunit 5b-like OS=Arabidopsis thaliana OX=3702 GN=At1g52710 PE=3 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 4.8e-27
Identity = 56/93 (60.22%), Postives = 66/93 (70.97%), Query Frame = 0


Query: 82  LEASLQGKDILDINHPVGPFGTKEAPAVIKSYYDERLVGCPGGEGEDEHDVVWFRLRKDV 141
           L+    G+ +LDI+HP  PFGTKE+PAV++SY+D+R +GC GGEGED HDVVWF L K  
Sbjct: 4   LDKEYSGRRLLDIDHPESPFGTKESPAVVQSYFDKRNIGCRGGEGEDGHDVVWFWLDKGK 63

Query: 142 PHECPVCSQYFVLEVVGPGGSPDGFGDD-DHHH 174
             ECPVCSQYF        G PDG GDD DHHH
Sbjct: 64  SFECPVCSQYF------EHGPPDGHGDDEDHHH 90

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BLAST of Cp4.1LG03g13850 vs. ExPASy Swiss-Prot
Match: P29505 (Cytochrome c oxidase subunit 5 OS=Dictyostelium discoideum OX=44689 GN=cxeA PE=1 SV=3)

HSP 1 Score: 58.2 bits (139), Expect = 1.1e-07
Identity = 26/71 (36.62%), Postives = 41/71 (57.75%), Query Frame = 0


Query: 93  DINHPV--GPFGTKEAPAVIKSYYDERLVGCPGGEGEDEHDVVWFRLRKDVPHECPVCSQ 152
           D  H V  G FGT ++P +++S +  R+V C GG+GE EHD+++  + +  P  C  C Q
Sbjct: 46  DFGHEVLTGAFGTLKSPVIVESIFHSRIVACEGGDGE-EHDILFHTVAEKKPTICLDCGQ 105

Query: 153 YFVLEVVGPGG 162
            F L+ +   G
Sbjct: 106 VFKLKHISSEG 115

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BLAST of Cp4.1LG03g13850 vs. NCBI nr
Match: XP_023528417.1 (cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 355 bits (911), Expect = 1.14e-123
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60
           MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA
Sbjct: 1   MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60

Query: 61  GTGVKKVEDVMPIATGHEREELEASLQGKDILDINHPVGPFGTKEAPAVIKSYYDERLVG 120
           GTGVKKVEDVMPIATGHEREELEASLQGKDILDINHPVGPFGTKEAPAVIKSYYDERLVG
Sbjct: 61  GTGVKKVEDVMPIATGHEREELEASLQGKDILDINHPVGPFGTKEAPAVIKSYYDERLVG 120

Query: 121 CPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH 173
           CPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH
Sbjct: 121 CPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH 173

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BLAST of Cp4.1LG03g13850 vs. NCBI nr
Match: XP_022956147.1 (cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita moschata] >XP_022980065.1 cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 354 bits (908), Expect = 3.28e-123
Identity = 172/173 (99.42%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60
           MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA
Sbjct: 1   MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60

Query: 61  GTGVKKVEDVMPIATGHEREELEASLQGKDILDINHPVGPFGTKEAPAVIKSYYDERLVG 120
           GTGVKKVEDVMPIATGHEREELEASL+GKDILDINHPVGPFGTKEAPAVIKSYYDERLVG
Sbjct: 61  GTGVKKVEDVMPIATGHEREELEASLEGKDILDINHPVGPFGTKEAPAVIKSYYDERLVG 120

Query: 121 CPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH 173
           CPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH
Sbjct: 121 CPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH 173

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BLAST of Cp4.1LG03g13850 vs. NCBI nr
Match: KAG6581911.1 (Cytochrome c oxidase subunit 5b-2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 352 bits (903), Expect = 1.90e-122
Identity = 171/173 (98.84%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60
           MWRRLLASQLK LKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA
Sbjct: 1   MWRRLLASQLKPLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60

Query: 61  GTGVKKVEDVMPIATGHEREELEASLQGKDILDINHPVGPFGTKEAPAVIKSYYDERLVG 120
           GTGVKKVEDVMPIATGHEREELEASL+GKDILDINHPVGPFGTKEAPAVIKSYYDERLVG
Sbjct: 61  GTGVKKVEDVMPIATGHEREELEASLEGKDILDINHPVGPFGTKEAPAVIKSYYDERLVG 120

Query: 121 CPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH 173
           CPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH
Sbjct: 121 CPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH 173

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BLAST of Cp4.1LG03g13850 vs. NCBI nr
Match: KAG7018344.1 (Cytochrome c oxidase subunit 5b-2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 350 bits (897), Expect = 1.56e-121
Identity = 170/173 (98.27%), Postives = 171/173 (98.84%), Query Frame = 0


Query: 1   MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60
           MWRRLLASQLK LKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA
Sbjct: 1   MWRRLLASQLKPLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60

Query: 61  GTGVKKVEDVMPIATGHEREELEASLQGKDILDINHPVGPFGTKEAPAVIKSYYDERLVG 120
           GTGVKKVEDVMPIATGHEREELEA L+GKDILDINHPVGPFGTKEAPAVIKSYYDERLVG
Sbjct: 61  GTGVKKVEDVMPIATGHEREELEALLEGKDILDINHPVGPFGTKEAPAVIKSYYDERLVG 120

Query: 121 CPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH 173
           CPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH
Sbjct: 121 CPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH 173

[Close]

BLAST of Cp4.1LG03g13850 vs. NCBI nr
Match: KAA0038130.1 (cytochrome c oxidase subunit 5b-2 [Cucumis melo var. makuwa] >TYK20477.1 cytochrome c oxidase subunit 5b-2 [Cucumis melo var. makuwa])

HSP 1 Score: 324 bits (831), Expect = 1.88e-111
Identity = 158/174 (90.80%), Postives = 167/174 (95.98%), Query Frame = 0


Query: 1   MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60
           MWRRLL+S LKSLKSLPSSSTPASAPLGCIS+A RLGAASH+SPS+ VSLFAR+YASDSA
Sbjct: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSA 60

Query: 61  GTGVKK-VEDVMPIATGHEREELEASLQGKDILDINHPVGPFGTKEAPAVIKSYYDERLV 120
            TG+KK VEDVMPIATGHEREELEASL+GKDILDINHPVGPFGTKEAPAVIKSYYDER+V
Sbjct: 61  DTGLKKKVEDVMPIATGHEREELEASLEGKDILDINHPVGPFGTKEAPAVIKSYYDERIV 120

Query: 121 GCPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH 173
           GCPGGE EDEHDVVWFRLRK VPHECPVCSQYFVLEVVGPGGSPDG+GDDDHHH
Sbjct: 121 GCPGGEDEDEHDVVWFRLRKGVPHECPVCSQYFVLEVVGPGGSPDGYGDDDHHH 174

[Close]

BLAST of Cp4.1LG03g13850 vs. ExPASy TrEMBL
Match: A0A6J1IV42 (cytochrome c oxidase subunit 5b-1, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111479582 PE=4 SV=1)

HSP 1 Score: 354 bits (908), Expect = 1.59e-123
Identity = 172/173 (99.42%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60
           MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA
Sbjct: 1   MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60

Query: 61  GTGVKKVEDVMPIATGHEREELEASLQGKDILDINHPVGPFGTKEAPAVIKSYYDERLVG 120
           GTGVKKVEDVMPIATGHEREELEASL+GKDILDINHPVGPFGTKEAPAVIKSYYDERLVG
Sbjct: 61  GTGVKKVEDVMPIATGHEREELEASLEGKDILDINHPVGPFGTKEAPAVIKSYYDERLVG 120

Query: 121 CPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH 173
           CPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH
Sbjct: 121 CPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH 173

[Close]

BLAST of Cp4.1LG03g13850 vs. ExPASy TrEMBL
Match: A0A6J1GVI7 (cytochrome c oxidase subunit 5b-1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111457927 PE=4 SV=1)

HSP 1 Score: 354 bits (908), Expect = 1.59e-123
Identity = 172/173 (99.42%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60
           MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA
Sbjct: 1   MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60

Query: 61  GTGVKKVEDVMPIATGHEREELEASLQGKDILDINHPVGPFGTKEAPAVIKSYYDERLVG 120
           GTGVKKVEDVMPIATGHEREELEASL+GKDILDINHPVGPFGTKEAPAVIKSYYDERLVG
Sbjct: 61  GTGVKKVEDVMPIATGHEREELEASLEGKDILDINHPVGPFGTKEAPAVIKSYYDERLVG 120

Query: 121 CPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH 173
           CPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH
Sbjct: 121 CPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH 173

[Close]

BLAST of Cp4.1LG03g13850 vs. ExPASy TrEMBL
Match: A0A5A7T437 (Cytochrome c oxidase subunit 5b-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00500 PE=4 SV=1)

HSP 1 Score: 324 bits (831), Expect = 9.08e-112
Identity = 158/174 (90.80%), Postives = 167/174 (95.98%), Query Frame = 0


Query: 1   MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60
           MWRRLL+S LKSLKSLPSSSTPASAPLGCIS+A RLGAASH+SPS+ VSLFAR+YASDSA
Sbjct: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSA 60

Query: 61  GTGVKK-VEDVMPIATGHEREELEASLQGKDILDINHPVGPFGTKEAPAVIKSYYDERLV 120
            TG+KK VEDVMPIATGHEREELEASL+GKDILDINHPVGPFGTKEAPAVIKSYYDER+V
Sbjct: 61  DTGLKKKVEDVMPIATGHEREELEASLEGKDILDINHPVGPFGTKEAPAVIKSYYDERIV 120

Query: 121 GCPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH 173
           GCPGGE EDEHDVVWFRLRK VPHECPVCSQYFVLEVVGPGGSPDG+GDDDHHH
Sbjct: 121 GCPGGEDEDEHDVVWFRLRKGVPHECPVCSQYFVLEVVGPGGSPDGYGDDDHHH 174

[Close]

BLAST of Cp4.1LG03g13850 vs. ExPASy TrEMBL
Match: A0A0A0LDH6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G538670 PE=4 SV=1)

HSP 1 Score: 318 bits (814), Expect = 3.55e-109
Identity = 153/174 (87.93%), Postives = 165/174 (94.83%), Query Frame = 0


Query: 1   MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60
           MWRRLL+S LKSLKSLPSSSTPASAPLGCIS+A RL AASH+SPS+ + LFAR+YASDSA
Sbjct: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA 60

Query: 61  GTGVKK-VEDVMPIATGHEREELEASLQGKDILDINHPVGPFGTKEAPAVIKSYYDERLV 120
            TG+KK VEDVMPIATGHEREELEASL+GKDILDINHP+GPFGTKEAPAVIKSYYDER+V
Sbjct: 61  DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTKEAPAVIKSYYDERIV 120

Query: 121 GCPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH 173
           GCPGGE EDEHDV+WFRLRK VPHECPVCSQYFVLEVVGPGGSPDG+GDDDHHH
Sbjct: 121 GCPGGEDEDEHDVIWFRLRKGVPHECPVCSQYFVLEVVGPGGSPDGYGDDDHHH 174

[Close]

BLAST of Cp4.1LG03g13850 vs. ExPASy TrEMBL
Match: A0A6J1KBJ1 (cytochrome c oxidase subunit 5b-2, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111492804 PE=4 SV=1)

HSP 1 Score: 313 bits (803), Expect = 1.69e-107
Identity = 153/174 (87.93%), Postives = 164/174 (94.25%), Query Frame = 0


Query: 1   MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60
           MWRRLL+SQLK+LKSLPSSSTPASAPLGCIS+ATRL A+S VS S+ VSLFAR+YASDSA
Sbjct: 1   MWRRLLSSQLKALKSLPSSSTPASAPLGCISQATRLAASSRVSHSSSVSLFARHYASDSA 60

Query: 61  GTGVKK-VEDVMPIATGHEREELEASLQGKDILDINHPVGPFGTKEAPAVIKSYYDERLV 120
            TG+KK  EDV+PI TGHEREELEASL+G+DILDINHPVGPFGTKE PAVIKSYYDERLV
Sbjct: 61  DTGLKKKAEDVIPIVTGHEREELEASLEGRDILDINHPVGPFGTKEEPAVIKSYYDERLV 120

Query: 121 GCPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH 173
           GCPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDG+GDDDH H
Sbjct: 121 GCPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGYGDDDHQH 174

[Close]

BLAST of Cp4.1LG03g13850 vs. TAIR 10
Match: AT3G15640.2 (Rubredoxin-like superfamily protein )

HSP 1 Score: 209.1 bits (531), Expect = 2.7e-54
Identity = 107/179 (59.78%), Postives = 133/179 (74.30%), Query Frame = 0


Query: 1   MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATR-LG---AASHVSPSAPVSLFARYYA 60
           MWRR+++SQLK+L    ++   A++P   I+  TR +G   AA+  + SA   +  R ++
Sbjct: 1   MWRRIVSSQLKTL----AADVVAASPRRSIAATTRPVGFYLAANRSAISASSFVIPRRFS 60

Query: 61  SDSAGTGVKKVEDVMPIATGHEREELEASLQGKDILDINHPVGPFGTKEAPAVIKSYYDE 120
           SDS     KKVEDVMPIATGHE+EELEA L+G+ + DI+ P GPFGTKEAPA++KSYYD+
Sbjct: 61  SDSETPATKKVEDVMPIATGHEKEELEAELEGRRLDDIDFPEGPFGTKEAPAIVKSYYDK 120

Query: 121 RLVGCPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFG--DDDHHH 174
           R+VGCPGGEGEDEHDVVWF L K    ECPVC+QYF LEVVGPGG PDG G  DD+HHH
Sbjct: 121 RIVGCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFELEVVGPGGPPDGHGDEDDEHHH 175

[Close]

BLAST of Cp4.1LG03g13850 vs. TAIR 10
Match: AT3G15640.1 (Rubredoxin-like superfamily protein )

HSP 1 Score: 207.2 bits (526), Expect = 1.0e-53
Identity = 108/180 (60.00%), Postives = 134/180 (74.44%), Query Frame = 0


Query: 1   MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATR-LG---AASHVSPSAPVSLFARYYA 60
           MWRR+++SQLK+L    ++   A++P   I+  TR +G   AA+  + SA   +  R ++
Sbjct: 1   MWRRIVSSQLKTL----AADVVAASPRRSIAATTRPVGFYLAANRSAISASSFVIPRRFS 60

Query: 61  SDSAGT-GVKKVEDVMPIATGHEREELEASLQGKDILDINHPVGPFGTKEAPAVIKSYYD 120
           SDS  T   KKVEDVMPIATGHE+EELEA L+G+ + DI+ P GPFGTKEAPA++KSYYD
Sbjct: 61  SDSVETPATKKVEDVMPIATGHEKEELEAELEGRRLDDIDFPEGPFGTKEAPAIVKSYYD 120

Query: 121 ERLVGCPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFG--DDDHHH 174
           +R+VGCPGGEGEDEHDVVWF L K    ECPVC+QYF LEVVGPGG PDG G  DD+HHH
Sbjct: 121 KRIVGCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFELEVVGPGGPPDGHGDEDDEHHH 176

[Close]

BLAST of Cp4.1LG03g13850 vs. TAIR 10
Match: AT1G80230.1 (Rubredoxin-like superfamily protein )

HSP 1 Score: 204.9 bits (520), Expect = 5.2e-53
Identity = 103/173 (59.54%), Postives = 128/173 (73.99%), Query Frame = 0


Query: 1   MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATRLGAASHVSP-SAPVSLFARYYASDS 60
           MWRR+++S LKS+ ++ S + P+      + ++T L  ++  S   A  S+F+R   S +
Sbjct: 1   MWRRIVSSHLKSISAVGSCAAPSCR--HAVVESTHLSLSTRASSIPAYSSIFSRLIGSAA 60

Query: 61  AGTGVKK-VEDVMPIATGHEREELEASLQGKDILDINHPVGPFGTKEAPAVIKSYYDERL 120
           A T VKK VEDVMPIATGHE+EEL+A L+G+ + DI+ P GPFGTKEAPAV+KSYYD R+
Sbjct: 61  ADTAVKKRVEDVMPIATGHEKEELQAELEGRKLDDIDFPEGPFGTKEAPAVVKSYYDMRI 120

Query: 121 VGCPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDH 172
           VGCPGGEGEDEHDVVWF L K    ECPVC+QYF LEVVGPGG PDG GDD H
Sbjct: 121 VGCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFKLEVVGPGGPPDGHGDDHH 171

[Close]

BLAST of Cp4.1LG03g13850 vs. TAIR 10
Match: AT1G52710.1 (Rubredoxin-like superfamily protein )

HSP 1 Score: 122.5 bits (306), Expect = 3.4e-28
Identity = 56/93 (60.22%), Postives = 66/93 (70.97%), Query Frame = 0


Query: 82  LEASLQGKDILDINHPVGPFGTKEAPAVIKSYYDERLVGCPGGEGEDEHDVVWFRLRKDV 141
           L+    G+ +LDI+HP  PFGTKE+PAV++SY+D+R +GC GGEGED HDVVWF L K  
Sbjct: 4   LDKEYSGRRLLDIDHPESPFGTKESPAVVQSYFDKRNIGCRGGEGEDGHDVVWFWLDKGK 63

Query: 142 PHECPVCSQYFVLEVVGPGGSPDGFGDD-DHHH 174
             ECPVCSQYF        G PDG GDD DHHH
Sbjct: 64  SFECPVCSQYF------EHGPPDGHGDDEDHHH 90

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g13850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LW15	1.5e-52	60.00	Cytochrome c oxidase subunit 5b-1, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
Q9SSB8	7.3e-52	59.54	Cytochrome c oxidase subunit 5b-2, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
Q9SSS5	4.8e-27	60.22	Putative cytochrome c oxidase subunit 5b-like OS=Arabidopsis thaliana OX=3702 GN...	[more]
P29505	1.1e-07	36.62	Cytochrome c oxidase subunit 5 OS=Dictyostelium discoideum OX=44689 GN=cxeA PE=1...	[more]

BLAST of Cp4.1LG03g13850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023528417.1	1.14e-123	100.00	cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita pepo subsp. pep...	[more]
XP_022956147.1	3.28e-123	99.42	cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita moschata] >XP_0...	[more]
KAG6581911.1	1.90e-122	98.84	Cytochrome c oxidase subunit 5b-2, mitochondrial, partial [Cucurbita argyrosperm...	[more]
KAG7018344.1	1.56e-121	98.27	Cytochrome c oxidase subunit 5b-2, mitochondrial [Cucurbita argyrosperma subsp. ...	[more]
KAA0038130.1	1.88e-111	90.80	cytochrome c oxidase subunit 5b-2 [Cucumis melo var. makuwa] >TYK20477.1 cytochr...	[more]

BLAST of Cp4.1LG03g13850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IV42	1.59e-123	99.42	cytochrome c oxidase subunit 5b-1, mitochondrial-like OS=Cucurbita maxima OX=366...	[more]
A0A6J1GVI7	1.59e-123	99.42	cytochrome c oxidase subunit 5b-1, mitochondrial-like OS=Cucurbita moschata OX=3...	[more]
A0A5A7T437	9.08e-112	90.80	Cytochrome c oxidase subunit 5b-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A0A0LDH6	3.55e-109	87.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G538670 PE=4 SV=1	[more]
A0A6J1KBJ1	1.69e-107	87.93	cytochrome c oxidase subunit 5b-2, mitochondrial-like OS=Cucurbita maxima OX=366...	[more]

BLAST of Cp4.1LG03g13850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15640.2	2.7e-54	59.78	Rubredoxin-like superfamily protein	[more]
AT3G15640.1	1.0e-53	60.00	Rubredoxin-like superfamily protein	[more]
AT1G80230.1	5.2e-53	59.54	Rubredoxin-like superfamily protein	[more]
AT1G52710.1	3.4e-28	60.22	Rubredoxin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002124	Cytochrome c oxidase, subunit Vb	PFAM	PF01215	COX5B	coord: 74..160 e-value: 5.9E-17 score: 61.6
IPR002124	Cytochrome c oxidase, subunit Vb	PANTHER	PTHR10122	CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL	coord: 1..173
IPR002124	Cytochrome c oxidase, subunit Vb	PROSITE	PS51359	COX5B_2	coord: 62..161 score: 20.926266
IPR002124	Cytochrome c oxidase, subunit Vb	CDD	cd00924	Cyt_c_Oxidase_Vb	coord: 65..159 e-value: 3.41839E-36 score: 119.326
IPR036972	Cytochrome c oxidase, subunit Vb superfamily	GENE3D	2.60.11.10	Cytochrome c oxidase, subunit Vb	coord: 64..157 e-value: 1.5E-29 score: 103.7
None	No IPR available	PANTHER	PTHR10122:SF16	SUBFAMILY NOT NAMED	coord: 1..173
None	No IPR available	SUPERFAMILY	57802	Rubredoxin-like	coord: 66..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g13850.1	Cp4.1LG03g13850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006123	mitochondrial electron transport, cytochrome c to oxygen
cellular_component	GO:0005751	mitochondrial respiratory chain complex IV
cellular_component	GO:0005740	mitochondrial envelope