Cp4.1LG03g13830 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAGATGAGTTAGGCAGTGACTGTATTGACGTGTAAAGAATCAAAAGAAACGAGAAGTAAACTACTCAAAAGGTATGAGGTGGGGCCTGGTTTTGAAGTATTGAAGAAGAAGGTAGCAGAGATATTTTGAGGATGTGCCTATCAAAGACATCCATTTGCCCTTTGGGCTCTGCCAAGGACCAAACTTCTCTAATTTATGCATCAAAAAGCAATCAAATACTTGAGCCAGCAAAGAAACATGTAAACAAATGAGATTCCCATGTGGGTCAGACCATACAGATCATAGTTGATATGGCCACACATTCCAACGCACATATATTATTTCAATAATTCGCCTTGAACGATAGCACTTCAATTATCAGTTGTACTGCATATATACAATTTACTAACCTTTTGATGAAAAAGCTTCACTTTTTCATCAACCATGTGGAGTAGCCTTCCTCTTGATGTTCTTGCCAACATCTTCTCCTTCCTCTCCCCAGACTCCTTGGCACGAGCTAGATCGGCCTGCAGGCATTGGCACGAGTGCGTCGATACTCGCCCCTTGAGCACCAAGCCAATTCTTTCGCAGTATCATCCCTCATGGTTCATCGCCTTGCCTTTGCGAGCACACAAGCTATGTTTTGCTCACAATCCAATTTTTGACAATTGGCATAAGCTCTCACTGGAATTTCTTCCTGATTTAGTCAAACCAATTGCCACAGTTGGTAATCTTCTGCTTTTAAGATCCGTAAGTTCTGTTGTTCTACAATTGATCATATGCAATCCATTCACTAGTCAATTCCGGTATCTTCCAAGGCCGAACATCACTAGGAGTAATCCGGCTGTGGGGGTTGTAATACAAAACACAAGCCAAGATTCTCAGTTTCCAGAATTCGAAGTCTATGTAGCAGGTGGGATGTCAGAGGCACCACAAGGTGGCACCACTTATGAATCAAAGTTGGAAATATATGATTCAAGAAACGACTCATGGAAAATTGTAGGATCACTGCCAGTGGAATTTTCCGTGAGGCTAACAGTCTGGACTCATAATGACAGTGTCTACTCTAATGGGGTTTTGTATTGGATAACCTCTGCAAGGGCATTCAGGGTGATGGGGTTTGAGATTAACTCAAACATTTGCAGGGAATTGCAGGTGCCAATGGCTGACCGACTTGAATTTGCCGCACTTACAAGCCGAAATGGAAGGCTAGCATTAGTTGGTGCCATATGCGGTGAAAACGCCTGCGTTTGGGAGCTTGGAGATAGAGATATGTGGGCAGTGGTTGAGAAGGTGCCAAATGACTTGGGAATAAAACTTCTAGGAGGAAGCAATGGAAGATGGATAAACACCAAGTGCGTAGCAAACAATGAGGTTATGTGCTTGTACAAGGAGCTTGGAAGTGGAATGGTAATTTGGAGAGAAAGAAAAGAGAAGAACAAATGGGAATGGAATTGGATCAATGGATGTTCTTCAATTAGAAGCCAAAGAGTTGATAACTTGCCAATAAAAGGACTGCTTCTTCAACCAAGCCTTGCTCCTTTTGCACCGTACTCAAATTGAATGTGAGTTTTTCAATCCTAACAATAAGAACAGCATAACTACTTTGATTATCATGTAGGAAATGATGGACCAACTTCCATTAATGAACGAATAAAGGGTCAATTACAGTTCACCTACAATATCATAGAAGTAAGAGTTTCTGAAAGGATGGATATCTAACTTGAAAGCATTATGACAGAATCAGAGTACAATTTGGAGCTATATCATCAGGAATGGCCCATGAGGAGAAGGTCAGAATCCACAGAAACTTGAAGAAATTGATGTTGTAAAAATGGCCAAATCACCAACCAATCTATTTTATAACACAATATCATGTCAAGTATGTACACCTTTTTATTCTAAATAAGTAGAATCAGTCAATAACTGCCTCACGAACTGGAATGGCTTGTGAAGAGCTCTGAAAGAAACATTTTCAGAAGACCAAAAAGCAACTATGTTCGGTATTGTACACAGAATCATCCAAGCAATAATTTCTTCAAAACACTTCAAAAAATTTCAGCAGCATCTAGAACTGTCACCAAGATATGAAGCTACAAATGGAACCTATCCTCACACCATAGTCAATTGCCATAAGAAAAAAAAAAACCTAGGGTTCAATCTCAGATCAAGGTAAGGCATGCTATCCAGCGCGGAAAATGCCAAAGGAAGCATTATTTTAACAGCATCTGAGTGGAGGGGGAAGAGCACAGAATTGAAAGATTATTATACCTCAAAGATCGAAATATGCATAAATCAATCAAACAAAACCTCTACAACGGCGAACATAACAAAAGCAATTGCAATAACCCATTAAATAATGATCGGTTTATTCCAAGGGAAGAGAATCCTAGGAGAACAAATCGGCGCAGATTAAGAAAATTCGGCGAGAATTAAAAATTAAGATCAGGGGAACTTAAATCATGGCCTGCGGGAGAGAGAATTCACAGATTAAGCAGAAGAAAGAGGCAATTAGAGTGAAAAAGGACAAACCGAGTAGCTACCAAATTACAAGATCCAATTGCTATGAGTTGGAATGAATCTCATGGGCGACCCATTAGCGCATTTAGCTCGACCAAATCAAGAATATGGATGCGAGTTCGCTTAGTGGGTTTATGTGTAAGTGTGTGGGCGTGTTTAGGGAAGTACCACATATCTAACCATGTATGTGTGTGTTTGCGTTACCCCGCCCTAACCACGAGGTTATTTACTGAGTATTTCTTAAAATATTCAAACCATGAGCTACTCTTACATCTTAGATAAAGACATAGTACCCATGTACGGATGACTAAGGTGACGCGTGAAGACCATAAAATCTGAGTTACGGTAGTTACATTTCATATTATTTGTCAGTCTTTATTAGGATTTAATAATTTTATT AAAGATGAGTTAGGCAGTGACTGTATTGACGTGTAAAGAATCAAAAGAAACGAGAAGTAAACTACTCAAAAGGTATGAGGTGGGGCCTGGTTTTGAAGTATTGAAGAAGAAGGTAGCAGAGATATTTTGAGGATGTGCCTATCAAAGACATCCATTTGCCCTTTGGGCTCTGCCAAGGACCAAACTTCTCTAATTTATGCATCAAAAAGCAATCAAATACTTGAGCCAGCAAAGAAACATGTAAACAAATGAGATTCCCATGTGGGTCAGACCATACAGATCATAGTTGATATGGCCACACATTCCAACGCACATATATTATTTCAATAATTCGCCTTGAACGATAGCACTTCAATTATCAGTTGTACTGCATATATACAATTTACTAACCTTTTGATGAAAAAGCTTCACTTTTTCATCAACCATGTGGAGTAGCCTTCCTCTTGATGTTCTTGCCAACATCTTCTCCTTCCTCTCCCCAGACTCCTTGGCACGAGCTAGATCGGCCTGCAGGCATTGGCACGAGTGCGTCGATACTCGCCCCTTGAGCACCAAGCCAATTCTTTCGCAGTATCATCCCTCATGGTTCATCGCCTTGCCTTTGCGAGCACACAAGCTATGTTTTGCTCACAATCCAATTTTTGACAATTGGCATAAGCTCTCACTGGAATTTCTTCCTGATTTAGTCAAACCAATTGCCACAGTTGGTAATCTTCTGCTTTTAAGATCCGTAAGTTCTGTTGTTCTACAATTGATCATATGCAATCCATTCACTAGTCAATTCCGGTATCTTCCAAGGCCGAACATCACTAGGAGTAATCCGGCTGTGGGGGTTGTAATACAAAACACAAGCCAAGATTCTCAGTTTCCAGAATTCGAAGTCTATGTAGCAGGTGGGATGTCAGAGGCACCACAAGGTGGCACCACTTATGAATCAAAGTTGGAAATATATGATTCAAGAAACGACTCATGGAAAATTGTAGGATCACTGCCAGTGGAATTTTCCGTGAGGCTAACAGTCTGGACTCATAATGACAGTGTCTACTCTAATGGGGTTTTGTATTGGATAACCTCTGCAAGGGCATTCAGGGTGATGGGGTTTGAGATTAACTCAAACATTTGCAGGGAATTGCAGGTGCCAATGGCTGACCGACTTGAATTTGCCGCACTTACAAGCCGAAATGGAAGGCTAGCATTAGTTGGTGCCATATGCGGTGAAAACGCCTGCGTTTGGGAGCTTGGAGATAGAGATATGTGGGCAGTGGTTGAGAAGGTGCCAAATGACTTGGGAATAAAACTTCTAGGAGGAAGCAATGGAAGATGGATAAACACCAAGTGCGTAGCAAACAATGAGGTTATGTGCTTGTACAAGGAGCTTGGAAGTGGAATGGTAATTTGGAGAGAAAGAAAAGAGAAGAACAAATGGGAATGGAATTGGATCAATGGATGTTCTTCAATTAGAAGCCAAAGAGTTGATAACTTGCCAATAAAAGGACTGCTTCTTCAACCAAGCCTTGCTCCTTTTGCACCGTACTCAAATTGAAATCAGAGTACAATTTGGAGCTATATCATCAGGAATGGCCCATGAGGAGAAGGTCAGAATCCACAGAAACTTGAAGAAATTGATGTTGTAAAAATGGCCAAATCACCAACCAATCTATTTTATAACACAATATCATGTCAAGTATGTACACCTTTTTATTCTAAATAAGTAGAATCAGTCAATAACTGCCTCACGAACTGGAATGGCTTGTGAAGAGCTCTGAAAGAAACATTTTCAGAAGACCAAAAAGCAACTATGTTCGGTATTGTACACAGAATCATCCAAGCAATAATTTCTTCAAAACACTTCAAAAAATTTCAGCAGCATCTAGAACTGTCACCAAGATATGAAGCTACAAATGGAACCTATCCTCACACCATAGTCAATTGCCATAAGAAAAAAAAAAACCTAGGGTTCAATCTCAGATCAAGGTAAGGCATGCTATCCAGCGCGGAAAATGCCAAAGGAAGCATTATTTTAACAGCATCTGAGTGGAGGGGGAAGAGCACAGAATTGAAAGATTATTATACCTCAAAGATCGAAATATGCATAAATCAATCAAACAAAACCTCTACAACGGCGAACATAACAAAAGCAATTGCAATAACCCATTAAATAATGATCGGTTTATTCCAAGGGAAGAGAATCCTAGGAGAACAAATCGGCGCAGATTAAGAAAATTCGGCGAGAATTAAAAATTAAGATCAGGGGAACTTAAATCATGGCCTGCGGGAGAGAGAATTCACAGATTAAGCAGAAGAAAGAGGCAATTAGAGTGAAAAAGGACAAACCGAGTAGCTACCAAATTACAAGATCCAATTGCTATGAGTTGGAATGAATCTCATGGGCGACCCATTAGCGCATTTAGCTCGACCAAATCAAGAATATGGATGCGAGTTCGCTTAGTGGGTTTATGTGTAAGTGTGTGGGCGTGTTTAGGGAAGTACCACATATCTAACCATGTATGTGTGTGTTTGCGTTACCCCGCCCTAACCACGAGGTTATTTACTGAGTATTTCTTAAAATATTCAAACCATGAGCTACTCTTACATCTTAGATAAAGACATAGTACCCATGTACGGATGACTAAGGTGACGCGTGAAGACCATAAAATCTGAGTTACGGTAGTTACATTTCATATTATTTGTCAGTCTTTATTAGGATTTAATAATTTTATT ATGTGGAGTAGCCTTCCTCTTGATGTTCTTGCCAACATCTTCTCCTTCCTCTCCCCAGACTCCTTGGCACGAGCTAGATCGGCCTGCAGGCATTGGCACGAGTGCGTCGATACTCGCCCCTTGAGCACCAAGCCAATTCTTTCGCAGTATCATCCCTCATGGTTCATCGCCTTGCCTTTGCGAGCACACAAGCTATGTTTTGCTCACAATCCAATTTTTGACAATTGGCATAAGCTCTCACTGGAATTTCTTCCTGATTTAGTCAAACCAATTGCCACAGTTGGTAATCTTCTGCTTTTAAGATCCGTAAGTTCTGTTGTTCTACAATTGATCATATGCAATCCATTCACTAGTCAATTCCGGTATCTTCCAAGGCCGAACATCACTAGGAGTAATCCGGCTGTGGGGGTTGTAATACAAAACACAAGCCAAGATTCTCAGTTTCCAGAATTCGAAGTCTATGTAGCAGGTGGGATGTCAGAGGCACCACAAGGTGGCACCACTTATGAATCAAAGTTGGAAATATATGATTCAAGAAACGACTCATGGAAAATTGTAGGATCACTGCCAGTGGAATTTTCCGTGAGGCTAACAGTCTGGACTCATAATGACAGTGTCTACTCTAATGGGGTTTTGTATTGGATAACCTCTGCAAGGGCATTCAGGGTGATGGGGTTTGAGATTAACTCAAACATTTGCAGGGAATTGCAGGTGCCAATGGCTGACCGACTTGAATTTGCCGCACTTACAAGCCGAAATGGAAGGCTAGCATTAGTTGGTGCCATATGCGGTGAAAACGCCTGCGTTTGGGAGCTTGGAGATAGAGATATGTGGGCAGTGGTTGAGAAGGTGCCAAATGACTTGGGAATAAAACTTCTAGGAGGAAGCAATGGAAGATGGATAAACACCAAGTGCGTAGCAAACAATGAGGTTATGTGCTTGTACAAGGAGCTTGGAAGTGGAATGGTAATTTGGAGAGAAAGAAAAGAGAAGAACAAATGGGAATGGAATTGGATCAATGGATGTTCTTCAATTAGAAGCCAAAGAGTTGATAACTTGCCAATAAAAGGACTGCTTCTTCAACCAAGCCTTGCTCCTTTTGCACCGTACTCAAATTGA MWSSLPLDVLANIFSFLSPDSLARARSACRHWHECVDTRPLSTKPILSQYHPSWFIALPLRAHKLCFAHNPIFDNWHKLSLEFLPDLVKPIATVGNLLLLRSVSSVVLQLIICNPFTSQFRYLPRPNITRSNPAVGVVIQNTSQDSQFPEFEVYVAGGMSEAPQGGTTYESKLEIYDSRNDSWKIVGSLPVEFSVRLTVWTHNDSVYSNGVLYWITSARAFRVMGFEINSNICRELQVPMADRLEFAALTSRNGRLALVGAICGENACVWELGDRDMWAVVEKVPNDLGIKLLGGSNGRWINTKCVANNEVMCLYKELGSGMVIWRERKEKNKWEWNWINGCSSIRSQRVDNLPIKGLLLQPSLAPFAPYSN Homology
BLAST of Cp4.1LG03g13830 vs. ExPASy Swiss-Prot
Match: Q9LUJ6 (Putative F-box protein At3g22650 OS=Arabidopsis thaliana OX=3702 GN=At3g22650 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 9.0e-07 Identity = 65/273 (23.81%), Postives = 117/273 (42.86%), Query Frame = 0
BLAST of Cp4.1LG03g13830 vs. ExPASy Swiss-Prot
Match: Q1PEN2 (F-box protein At3g22350 OS=Arabidopsis thaliana OX=3702 GN=At3g22350 PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 5.8e-06 Identity = 51/204 (25.00%), Postives = 85/204 (41.67%), Query Frame = 0
BLAST of Cp4.1LG03g13830 vs. ExPASy Swiss-Prot
Match: Q9FVS1 (F-box/kelch-repeat protein At1g57790 OS=Arabidopsis thaliana OX=3702 GN=At1g57790 PE=2 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 3.2e-04 Identity = 56/229 (24.45%), Postives = 86/229 (37.55%), Query Frame = 0
BLAST of Cp4.1LG03g13830 vs. NCBI nr
Match: XP_023528565.1 (protein UNUSUAL FLORAL ORGANS-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 773 bits (1995), Expect = 3.01e-282 Identity = 372/372 (100.00%), Postives = 372/372 (100.00%), Query Frame = 0
BLAST of Cp4.1LG03g13830 vs. NCBI nr
Match: KAG6581917.1 (hypothetical protein SDJN03_21919, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 767 bits (1980), Expect = 5.83e-280 Identity = 369/372 (99.19%), Postives = 371/372 (99.73%), Query Frame = 0
BLAST of Cp4.1LG03g13830 vs. NCBI nr
Match: KAG7018351.1 (Protein UNUSUAL FLORAL ORGANS, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 766 bits (1979), Expect = 8.28e-280 Identity = 369/372 (99.19%), Postives = 370/372 (99.46%), Query Frame = 0
BLAST of Cp4.1LG03g13830 vs. NCBI nr
Match: XP_022980071.1 (protein UNUSUAL FLORAL ORGANS-like [Cucurbita maxima]) HSP 1 Score: 759 bits (1961), Expect = 4.59e-277 Identity = 365/372 (98.12%), Postives = 369/372 (99.19%), Query Frame = 0
BLAST of Cp4.1LG03g13830 vs. NCBI nr
Match: XP_022956130.1 (protein UNUSUAL FLORAL ORGANS-like [Cucurbita moschata]) HSP 1 Score: 759 bits (1960), Expect = 6.52e-277 Identity = 366/372 (98.39%), Postives = 369/372 (99.19%), Query Frame = 0
BLAST of Cp4.1LG03g13830 vs. ExPASy TrEMBL
Match: A0A6J1ISJ5 (protein UNUSUAL FLORAL ORGANS-like OS=Cucurbita maxima OX=3661 GN=LOC111479585 PE=4 SV=1) HSP 1 Score: 759 bits (1961), Expect = 2.22e-277 Identity = 365/372 (98.12%), Postives = 369/372 (99.19%), Query Frame = 0
BLAST of Cp4.1LG03g13830 vs. ExPASy TrEMBL
Match: A0A6J1GWZ4 (protein UNUSUAL FLORAL ORGANS-like OS=Cucurbita moschata OX=3662 GN=LOC111457915 PE=4 SV=1) HSP 1 Score: 759 bits (1960), Expect = 3.16e-277 Identity = 366/372 (98.39%), Postives = 369/372 (99.19%), Query Frame = 0
BLAST of Cp4.1LG03g13830 vs. ExPASy TrEMBL
Match: A0A5A7TT80 (Protein UNUSUAL FLORAL ORGANS-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001630 PE=4 SV=1) HSP 1 Score: 667 bits (1721), Expect = 9.44e-241 Identity = 315/372 (84.68%), Postives = 343/372 (92.20%), Query Frame = 0
BLAST of Cp4.1LG03g13830 vs. ExPASy TrEMBL
Match: A0A1S4E0E5 (protein UNUSUAL FLORAL ORGANS-like OS=Cucumis melo OX=3656 GN=LOC103494716 PE=4 SV=1) HSP 1 Score: 667 bits (1721), Expect = 9.44e-241 Identity = 315/372 (84.68%), Postives = 343/372 (92.20%), Query Frame = 0
BLAST of Cp4.1LG03g13830 vs. ExPASy TrEMBL
Match: A0A0A0KTC6 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G004860 PE=4 SV=1) HSP 1 Score: 664 bits (1714), Expect = 9.84e-240 Identity = 312/372 (83.87%), Postives = 343/372 (92.20%), Query Frame = 0
BLAST of Cp4.1LG03g13830 vs. TAIR 10
Match: AT3G22350.1 (F-box and associated interaction domains-containing protein ) HSP 1 Score: 58.9 bits (141), Expect = 9.9e-09 Identity = 62/264 (23.48%), Postives = 107/264 (40.53%), Query Frame = 0
BLAST of Cp4.1LG03g13830 vs. TAIR 10
Match: AT3G22350.2 (F-box and associated interaction domains-containing protein ) HSP 1 Score: 53.5 bits (127), Expect = 4.1e-07 Identity = 51/204 (25.00%), Postives = 85/204 (41.67%), Query Frame = 0
BLAST of Cp4.1LG03g13830 vs. TAIR 10
Match: AT3G22650.1 (F-box and associated interaction domains-containing protein ) HSP 1 Score: 52.0 bits (123), Expect = 1.2e-06 Identity = 64/263 (24.33%), Postives = 114/263 (43.35%), Query Frame = 0
BLAST of Cp4.1LG03g13830 vs. TAIR 10
Match: AT1G57790.1 (F-box family protein ) HSP 1 Score: 47.8 bits (112), Expect = 2.3e-05 Identity = 56/229 (24.45%), Postives = 86/229 (37.55%), Query Frame = 0
BLAST of Cp4.1LG03g13830 vs. TAIR 10
Match: AT3G17500.1 (F-box family protein ) HSP 1 Score: 45.8 bits (107), Expect = 8.6e-05 Identity = 51/194 (26.29%), Postives = 79/194 (40.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|