Cp4.1LG03g12800 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AATCAGCAGCAATTTCCATGGAGAACAGAACGGAGGGAGAGCTCAGACAGGCGGGAAGCCGTCGAATCTGCGCTTAAACGCCGACTTCCCACACAATTCTCATCTCTTGGTTTAATTATTCACGACGTTCATAACGCAATGTCCACACAGCGCATCAGTTTATCTCTCTTGTTCTTCCAATTTTTCCTCCTCTTTCCTTCAATAATTTCAGCTATCAGGTGAGTTTTTTTCACTTTCAGTTTCTAATTCATCCCATCTGCGTTGTTCTTTCTAGGATTTTGGCCTTTCGTACTGTTCTGTTCCCGATTACAGAGAAACCAAACGGAAGAATGTTGCTGTTTAGATTCTTGAATTTTGGAATCCATTTATAAATGGATTTTCAGTCTCTTTAGTTTTCTTAATACTCTTTACGAGTGGATTTTCTCGTGATCTTTTATGACTTACAATTTTTTCTTGCCTTCGCTATTGATGGGTTAAATACTGTATGTTCTATATTCATATCATTTTGTTTCTATGCCATCATAGCTATATTTCAGTTTGTTTACTAAATTATTGTTCTTTTTTTTTTCTTTTTTTTTTATTTATTTATTATTGAAGGAATAATATTGGGTTAGCAGTAAATAGATCATGTAGGAGCACTGTTCAGGGAAGATATTTACTGGCTGATGATAGTGGTAAGCATTTCTTTCGTTAACTCGTAGTGCTACTTCGTTTTTTTATTTTTTGCAGTTACATTGAAATTTCCTGAATATGTGCCTTTCTTTTACTTATTTTCAATTTTTTTTTATTAGGGGCGTTTGAAAAATTTGATGAACAAGTTAGTTTTAAATTCTTTGTTCTTTTTTGTGCGAGTTCACTTGGATTTGTTTGATTCACAGTTCTTTGGTTGGGCCACAGTGATAAATCTCTGATCTTGAAGATGTCTGCCACTTAATCTAACTTTTAGAAGGAAAATCATTAGAGCTATTATATGGAATTGCATATTGCCTAAAATAGCCATGAGAATTACAAAAAGCAAGACCAGCGGGCTATAAGAGATTTAAGGCTGTAATTAAAAAAAGTATGGGGAGATTTTACACCAAGATAGGGAAGTATAAATAAGGTGCTCCTTTTCCTTCTTGAAAGGGTGACCCATAAGAAGCATCTGGAATGTGAGTGGAACACTGGGGAAGACCAAATGGTAGCGTTGACGCGTCCATGGCTGATTTCCTAAACGAGGAAAGGTTTTGACAAAGGGAACACTAGGGGGCCTTTCCATATATTCGTGTATAGGTTCTTATGATGTAGACTACCACTGGATGATAATTTGTAAGAAAGATATCTAGTTTTGTAGGAACCTTTAGTATCTAGGGTTCATTTCCATTGGTCTTCCACCGTAGGTCTAGAAGGGGGTTGTAAAAGAGTGGATCAGAGGGACAACTCAATGATCTTTTCTTTTGTAAGGTGTCTTCTTAAGCCAAGATCCCAAGAGGCATTATTTCTGTTCCAACATGCCGCAGTAGTTGATTTCTTGCGGCTTGAGAGAGTGTGAAGTCTGGAAGGCAGCTTTGAGAGGAGATGAACCCCAATTGTCAGTCCAAAAGGATATGGACTCACATTGTTGTCAAGGATCAAATCTTCTTGCTGTTGAATATATTTCCTTGGCCTCTTGAATGTTTGAGCTTGGATTGACTAGAGTGGTTGTTAGTCTCATCCCTCTTGTATACAAAATCATTATCAGAGTTCTCTTCAAAAACTGGAAACAGTCCTTCCATATGTTTAAGCTCCATTTTCAGCAGAGAGCGAGAGAGAGAGAGAGAGAATTGGGAGACTGTAGATTGACTATCTTAGACCCCTTAAATTGGCCTCAAAACCTGCTGTTAGATGTTCTGTGTTGGTGCTGCCCTGCCTACTGCTTTTTGTTATGCTCTTCTTAGTCAATGTTTACAGTGATACCTTCATCTTGTTCATTATTAATTTCTACCACCTCTATTTAGATATTCATCTGTGAGTTTAATTATCAATTATTACCTCTGCCTTTCTTGGCTATGACAATACTCATGTATTCTGCTTATAATCTTATCTAGATCTTAATAGTATTCTAGAGAATACTAAAAATTCTGGAAAGTCCTGAAACTTTTTACGTACATGTTTTGTCAGAACTTGTAACTTCTGGAAAGTCCTAAATGTATACTTCTTCCATTCAGCATAATTATTGTGCTCTCATGCAGGCTATGTATGTGATGCTTCGTCTTTTGATCCACTATCTCGTTGCTGCCTAGGGAAAGGGGAAAAATTTCCTTGTCAGTGAGTTTTTTTCCAGATAAATCTTTGATGGCTCATGATGAGTGTAAGAGCTCGAGCTCTGTCGAGCATAGTATTTATTTTTCTGCTTACAATTTGCAGTGGATGCAATCTTGTTTCACAATGTTGTAATTCCTACGAATATTGTGTTTCATGCTGCCAGGATCCTTCAAGGGTATGATGGAATTCTTCTTGATTCTTATAATGCCTCATTCTGTTTTTATTTAGTCTTCTTTTTCCTTATGAATTTGAGCTGGAATCTAAAAATTGGCGCCTTTCTGGATGCTGCTTGCAGACAAAAAGGGAGCAAATACTAAAAATAAAAATTGCTAAGCCTTCCACTGCAGGTGATGATGTACTTATAGAAAAATTAATTTTGTTATTCCAAAGACATTAATTAAATATTTCAAACTACGCTAAATCTTGCAGGGACATATGCCGGTGTGTTTGATTTCTGTGTTGGGAGGTGTCGTCATAGTTCGGAGAGTGTTGTAAGTGTCCTGCATTGATATTTTATTCTAAATGTTTAAAATAAAATTTGAGGTGTTGTCATAATTCGGAGGTGTCGTCATAATCTGACATCATATCTTTTCTTTTAACAGTTGAGTTATTTGATAGAATTTACAATTTTCAGGTGCACGAAAATGCTTATCGCAGCGATTACCATCATTGCTTTTCTCTGCCGTCATATTCTTCAGGTTAGCTGATAAAGCTGAATTAGATTGGAGTTCTTCTTTGGCGGTTGTAAATTGCAGTGGAATGTTCAGCTACTTTAGTAAATGAATTCAAACCATGTAAGGATTATGATTTTTAAAATAATTGCACAGAGGTTAAGTTCCATGTGTAACCTTTTTTTAAAAACCATTTTCAGGCGCGTTTCATATTTTAGCAGTCCCTGATTTTCTACATTTTCCATTTGTTGCCATCATTTCCATATTTGTGCTGATCTTCCATTTTCAGGTGTCTTTCTCACTTTTTCTTTTAGATTCAGTGTAATTGCATTCATGTAATAGCCTTCTTGGAAACCTCTCCTTAGCATACGCATTTTAAAAACCTTGAGGGGAAATCCAAAAGGGAAAGCCCGAAGAGGATAATATCTGCTAGCGGTGGGCTTAGGCCGTTACAAATGGTATCAGAGCCAGATACCAGGCGATATGCCAGCGAGAAGGCTGAGTCCCGAAGGGGGTGGACACAAGGCGGTGTGCCAGCAAGGATGTTGGGCCTTGCAAGGGAGTGGATTAGGGGATCCCACATTGATTGGAGGAGGGAACAAATGCCAGCGAGGATGCTGGGCCTGAAGGTGGTGGATTGTGAGATCCCACATTGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTTTTCCTAGCAGACGCATCTTAAAAACCTCGAGGAGAAGCCCGAAAGGGATAACCAAACAAGGACAATATCTACTAGCGGTGGGCTTCAGCCATCTCACAAAATTTGTACCCAGGTTGTCTTCAGTTATATAAATTCAGGTCGGTGCGGTTCAACATAAACCAATGAATGAATCCAACCAACCCAAACCCACCCATGAACCACAGCCGAATGACCGCCTCAGAGAACTTGGAACTCCATTATCTTCCGTCCTTCTGTCATGTTTGTGATTTGTTTACAAAATCAGGATTGTATTTTTTATAAGGTTTTCTAAGCATGTCATTTTCATGTTTTTTTTTTCTTTTCTAATTTCTTATCTAAAACATTTATTATACTTAATGGTCTTCATAGGAGTCAATGGCACGGAACTAGAATTCAAACTCAACGGTGTCAACGTCATTATTGGAAGGTATCGTTCAGGGTAGTTATCTATAGGTCTGCTTCCTTTTACATTGTTTGACATCTTTCTTATACTCTTCTGAACTGAATGTATGATAGACAAGGAGAGTCATGTGATTCAGTTTGCAAGACAAATGGACAATCATGCATCCCAAACAAGCTTATGGTCCTAAATCACTGTGACATGTGAGTAAGCTTCTGTTTTCTTTTCCATTTCTTATGAAGCCATTAGAATTTTTCTTGATTTAAGTGTTTTTGAATAAAAAAAAAGTGGATGTAGTTACTGTGAGATCCCACATCGGTTGGGGAGGTGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCGGACGCATTTTAAAAACCTTGAGGGGAAGTCTGAAAGGGAAAGCCCAAAGAGAACAATATCCGTTAACGGGTGGGCTTGGACCGTTACAATTACTCTGTGCACGGTAGATGACTTATGAATTATGAATTGTATACTTTCTTATATTCATATTCATGTTGTTTTCTTTATTTGGGATAGTATGCAAAAATACTTGAGCTGCAAAGGAGGTTGCTTACCAAGTGTTGGGCCTGATCAACCTGCTGAAGTTGCTTATAATTCTCCTAAAGAACTGGTATGTTGTCCTCTTCTTTTTGTATTGATAATCAGACGTGATTCTCAGTATTATTTGTTGGCATAATGGGATTGGATGATTATGGTTCGAATAATCAATAAGAACGTAAGGCGTGGGAAGAACGAAAATGTCATACTGTTACACTGATATTTTGGGATTTATACACCGAATTACTTGATGTTCAAATAGATTGAAAGGGTTTATGGTACCCAACCAAACTTAGTTCATCATCATGTTCACCCAGTTCAAATAGATTGTGTTCTTCCTTTATTGATATTAAAACCGAACTTTCCCCAGATATGTAAGTTTTACTGAGAGTTTCTTTTGAATGTATTATAAAGGAAATGATGCATGAAAGCAGCTGTGTTTTTTTATGCTATAGAGTTCTTATATTTAGTGTATACAAATACCAGAATCCAGGAGCGTGCTTATACAGCAGCGCACAGCCAATGCTTTCTTGCGATGGCTCACACCCGCATACCAGAAGGCTTTGTCCTTGCGCCTAGCACATCTTCTAGATAT AATCAGCAGCAATTTCCATGGAGAACAGAACGGAGGGAGAGCTCAGACAGGCGGGAAGCCGTCGAATCTGCGCTTAAACGCCGACTTCCCACACAATTCTCATCTCTTGGTTTAATTATTCACGACGTTCATAACGCAATGTCCACACAGCGCATCAGTTTATCTCTCTTGTTCTTCCAATTTTTCCTCCTCTTTCCTTCAATAATTTCAGCTATCAGGAATAATATTGGGTTAGCAGTAAATAGATCATGTAGGAGCACTGTTCAGGGAAGATATTTACTGGCTGATGATAGTGGCTATGTATGTGATGCTTCGTCTTTTGATCCACTATCTCGTTGCTGCCTAGGGAAAGGGGAAAAATTTCCTTGTCATGGATGCAATCTTGTTTCACAATGTTGTAATTCCTACGAATATTGTGTTTCATGCTGCCAGGATCCTTCAAGGACAAAAAGGGAGCAAATACTAAAAATAAAAATTGCTAAGCCTTCCACTGCAGGGACATATGCCGGTGTGTTTGATTTCTGTGTTGGGAGGTGTCGTCATAGTTCGGAGAGTGTTGTGCACGAAAATGCTTATCGCAGCGATTACCATCATTGCTTTTCTCTGCCGTCATATTCTTCAGGAGTCAATGGCACGGAACTAGAATTCAAACTCAACGGTGTCAACGTCATTATTGGAAGACAAGGAGAGTCATGTGATTCAGTTTGCAAGACAAATGGACAATCATGCATCCCAAACAAGCTTATGGTCCTAAATCACTGTGACATTATGCAAAAATACTTGAGCTGCAAAGGAGGTTGCTTACCAAGTGTTGGGCCTGATCAACCTGCTGAAGTTGCTTATAATTCTCCTAAAGAACTGGAGCGTGCTTATACAGCAGCGCACAGCCAATGCTTTCTTGCGATGGCTCACACCCGCATACCAGAAGGCTTTGTCCTTGCGCCTAGCACATCTTCTAGATAT AATCAGCAGCAATTTCCATGGAGAACAGAACGGAGGGAGAGCTCAGACAGGCGGGAAGCCGTCGAATCTGCGCTTAAACGCCGACTTCCCACACAATTCTCATCTCTTGGTTTAATTATTCACGACGTTCATAACGCAATGTCCACACAGCGCATCAGTTTATCTCTCTTGTTCTTCCAATTTTTCCTCCTCTTTCCTTCAATAATTTCAGCTATCAGGAATAATATTGGGTTAGCAGTAAATAGATCATGTAGGAGCACTGTTCAGGGAAGATATTTACTGGCTGATGATAGTGGCTATGTATGTGATGCTTCGTCTTTTGATCCACTATCTCGTTGCTGCCTAGGGAAAGGGGAAAAATTTCCTTGTCATGGATGCAATCTTGTTTCACAATGTTGTAATTCCTACGAATATTGTGTTTCATGCTGCCAGGATCCTTCAAGGACAAAAAGGGAGCAAATACTAAAAATAAAAATTGCTAAGCCTTCCACTGCAGGGACATATGCCGGTGTGTTTGATTTCTGTGTTGGGAGGTGTCGTCATAGTTCGGAGAGTGTTGTGCACGAAAATGCTTATCGCAGCGATTACCATCATTGCTTTTCTCTGCCGTCATATTCTTCAGGAGTCAATGGCACGGAACTAGAATTCAAACTCAACGGTGTCAACGTCATTATTGGAAGACAAGGAGAGTCATGTGATTCAGTTTGCAAGACAAATGGACAATCATGCATCCCAAACAAGCTTATGGTCCTAAATCACTGTGACATTATGCAAAAATACTTGAGCTGCAAAGGAGGTTGCTTACCAAGTGTTGGGCCTGATCAACCTGCTGAAGTTGCTTATAATTCTCCTAAAGAACTGGAGCGTGCTTATACAGCAGCGCACAGCCAATGCTTTCTTGCGATGGCTCACACCCGCATACCAGAAGGCTTTGTCCTTGCGCCTAGCACATCTTCTAGATAT NQQQFPWRTERRESSDRREAVESALKRRLPTQFSSLGLIIHDVHNAMSTQRISLSLLFFQFFLLFPSIISAIRNNIGLAVNRSCRSTVQGRYLLADDSGYVCDASSFDPLSRCCLGKGEKFPCHGCNLVSQCCNSYEYCVSCCQDPSRTKREQILKIKIAKPSTAGTYAGVFDFCVGRCRHSSESVVHENAYRSDYHHCFSLPSYSSGVNGTELEFKLNGVNVIIGRQGESCDSVCKTNGQSCIPNKLMVLNHCDIMQKYLSCKGGCLPSVGPDQPAEVAYNSPKELERAYTAAHSQCFLAMAHTRIPEGFVLAPSTSSRY Homology
BLAST of Cp4.1LG03g12800 vs. ExPASy Swiss-Prot
Match: Q8BTG6 (SREBP regulating gene protein OS=Mus musculus OX=10090 GN=Spring1 PE=2 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 5.4e-16 Identity = 46/118 (38.98%), Postives = 69/118 (58.47%), Query Frame = 0
BLAST of Cp4.1LG03g12800 vs. ExPASy Swiss-Prot
Match: Q17QN8 (SREBP regulating gene protein OS=Bos taurus OX=9913 GN=SPRING PE=2 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 2.0e-15 Identity = 44/118 (37.29%), Postives = 71/118 (60.17%), Query Frame = 0
BLAST of Cp4.1LG03g12800 vs. ExPASy Swiss-Prot
Match: Q6GNT2 (SREBP regulating gene protein OS=Xenopus laevis OX=8355 GN=spring1 PE=2 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 2.7e-15 Identity = 45/127 (35.43%), Postives = 72/127 (56.69%), Query Frame = 0
BLAST of Cp4.1LG03g12800 vs. ExPASy Swiss-Prot
Match: Q9H741 (SREBP regulating gene protein OS=Homo sapiens OX=9606 GN=SPRING1 PE=1 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 1.0e-14 Identity = 42/118 (35.59%), Postives = 70/118 (59.32%), Query Frame = 0
BLAST of Cp4.1LG03g12800 vs. ExPASy Swiss-Prot
Match: Q5ZJE4 (SREBP regulating gene protein OS=Gallus gallus OX=9031 GN=SPRING PE=2 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.7e-14 Identity = 44/122 (36.07%), Postives = 69/122 (56.56%), Query Frame = 0
BLAST of Cp4.1LG03g12800 vs. NCBI nr
Match: XP_023527421.1 (uncharacterized protein LOC111790656 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 500 bits (1288), Expect = 5.09e-177 Identity = 247/265 (93.21%), Postives = 250/265 (94.34%), Query Frame = 0
BLAST of Cp4.1LG03g12800 vs. NCBI nr
Match: XP_022955357.1 (uncharacterized protein LOC111457409 isoform X1 [Cucurbita moschata]) HSP 1 Score: 495 bits (1274), Expect = 6.91e-175 Identity = 243/265 (91.70%), Postives = 249/265 (93.96%), Query Frame = 0
BLAST of Cp4.1LG03g12800 vs. NCBI nr
Match: XP_022979904.1 (uncharacterized protein LOC111479456 [Cucurbita maxima]) HSP 1 Score: 492 bits (1267), Expect = 8.05e-174 Identity = 242/265 (91.32%), Postives = 247/265 (93.21%), Query Frame = 0
BLAST of Cp4.1LG03g12800 vs. NCBI nr
Match: XP_038899507.1 (uncharacterized protein LOC120086783 [Benincasa hispida] >XP_038899515.1 uncharacterized protein LOC120086783 [Benincasa hispida]) HSP 1 Score: 437 bits (1125), Expect = 3.37e-152 Identity = 211/265 (79.62%), Postives = 231/265 (87.17%), Query Frame = 0
BLAST of Cp4.1LG03g12800 vs. NCBI nr
Match: XP_008453981.1 (PREDICTED: uncharacterized protein LOC103494541 isoform X1 [Cucumis melo]) HSP 1 Score: 432 bits (1110), Expect = 6.46e-150 Identity = 208/265 (78.49%), Postives = 230/265 (86.79%), Query Frame = 0
BLAST of Cp4.1LG03g12800 vs. ExPASy TrEMBL
Match: A0A6J1GTC2 (SREBP regulating gene protein OS=Cucurbita moschata OX=3662 GN=LOC111457409 PE=3 SV=1) HSP 1 Score: 495 bits (1274), Expect = 3.35e-175 Identity = 243/265 (91.70%), Postives = 249/265 (93.96%), Query Frame = 0
BLAST of Cp4.1LG03g12800 vs. ExPASy TrEMBL
Match: A0A6J1IXW2 (SREBP regulating gene protein OS=Cucurbita maxima OX=3661 GN=LOC111479456 PE=3 SV=1) HSP 1 Score: 492 bits (1267), Expect = 3.90e-174 Identity = 242/265 (91.32%), Postives = 247/265 (93.21%), Query Frame = 0
BLAST of Cp4.1LG03g12800 vs. ExPASy TrEMBL
Match: A0A1S3BX18 (SREBP regulating gene protein OS=Cucumis melo OX=3656 GN=LOC103494541 PE=3 SV=1) HSP 1 Score: 432 bits (1110), Expect = 3.13e-150 Identity = 208/265 (78.49%), Postives = 230/265 (86.79%), Query Frame = 0
BLAST of Cp4.1LG03g12800 vs. ExPASy TrEMBL
Match: A0A0A0KW54 (SREBP regulating gene protein OS=Cucumis sativus OX=3659 GN=Csa_4G015790 PE=3 SV=1) HSP 1 Score: 428 bits (1101), Expect = 7.32e-149 Identity = 207/265 (78.11%), Postives = 229/265 (86.42%), Query Frame = 0
BLAST of Cp4.1LG03g12800 vs. ExPASy TrEMBL
Match: A0A6J1CVD9 (SREBP regulating gene protein OS=Momordica charantia OX=3673 GN=LOC111014633 PE=3 SV=1) HSP 1 Score: 424 bits (1089), Expect = 5.09e-147 Identity = 203/262 (77.48%), Postives = 223/262 (85.11%), Query Frame = 0
BLAST of Cp4.1LG03g12800 vs. TAIR 10
Match: AT3G59390.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2054 (InterPro:IPR019352); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 324.7 bits (831), Expect = 8.3e-89 Identity = 151/261 (57.85%), Postives = 196/261 (75.10%), Query Frame = 0
BLAST of Cp4.1LG03g12800 vs. TAIR 10
Match: AT3G59390.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2054 (InterPro:IPR019352); Has 184 Blast hits to 184 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). ) HSP 1 Score: 324.7 bits (831), Expect = 8.3e-89 Identity = 151/261 (57.85%), Postives = 196/261 (75.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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