Cp4.1LG03g12360 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG03g12360
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	F-box protein SKIP16
Location	Cp4.1LG03: 10336155 .. 10340111 (+)
RNA-Seq Expression	Cp4.1LG03g12360
Synteny	Cp4.1LG03g12360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGGTTCCCATCATTTTAATAATAAGCGAAATTCGTCAGTACCCAAAGCCAAGGGAATGTGTCGAAGCTGACACACGGATTCTCCATATCTACACCGATTAGAGGCGGCACCGCTTCCACTGAGTTCGTCGGAATCAGCAATGGATGTCGAGGCGTTGGGCGATCTTGCGCTTCACTTGATTTTCGCGAAATTAAGCCCTAAAGACTCTGCCATCGCCGCTTGTGTTAGCCGCAAATTCAGGTCCTCAGCGTCCGAAGATTCTCTGTGGGAGAAATTCTGCCATCGGGACCTCGGCCTCACCGACCCAATCGATCATTTGGGAAACCCTGTTCCGTCATTCAAGGTTACACCCCTCACCAAATTGGGTATCCATTATTTTGTATTGATTTGATGAATAATCTATAGTAGTTGTGAAAATAAGGTGCAGATGATTAGATTTATTGGTTAGGATATTGATTGTGCTCTTGATATCATTTTGAATCAATGTTACCTGTATTTGCTTTGATCTATGAATTATGGCCCTGTTCTTGTTGTGCTTGATGCTGTTTGTGAGATGGGTATGTTTAAGTTTGATATCATAAGCTATATGAATGGATATACAGCGAGTGATGCGGTAGGTATTCATCTAGGGCGCCGTGCTGGTTCATTTGATTCATTGTGCATAACTCATTACTGATCTCTCTCTTTGTAGGAGAGTTATCAAGAATGGCGGAGAGCTTTTGGGATGTATCCATGGCCTCTGGTCGAGCGAGTTAAGCGATGTTGGGATAGAATCGAAAACTGGTTGCGTCATAATTATCCCGAGGCTCTGGTGACACTTAGGGAAGGTGCATCAGAAGCTGACATTGAAGATTTGGAAAATGCTTTGAAAGTGAAGCTACCTCTTCCAACGAGGATTCTTTATCGTTTTCATAATGGTCAAGATTTGAAAGGCAGATATGTTGATAGTGTTCGAGGCTTCCCGTTCGGTTTAATTGGGGGATATACATTCTATGAACAGACGGTAAATGTTTATTTGTTGCCTTTGAGACAAGTGATCACTGAAACGAAATCAATCATTCAAGAACTTGGTTTCTCGAGGAGATCTAAATTCATTGTTGTAGCTTCGTCTTCTACGCTCGTTCATAAGGTTTTTTTCCTTAATTGTGCTTCGGGTCAACTCTTTGTGGGTACTGCAAATCTTCGAGAAGATGGAGAAATGATTCCTTGTGTACCTAGTGCATTGATAAACTCGGTGCATGAGTATAACACAGACCAACAACAAGATGCTATGTTATTATGGCTAGAAGAGCATGTTCGACGCTTAGAAAATGGTATTATCAAGCTTCGTGAAACTAATAACATTAGGAGCATCTCTCTTTTTCCGGAAGAACCTCCCTTTTGCTCTGTTGCAACAACCAATGGTGTTCGTGTAAGTTTTACTTTTAGATATTATAGTTTCTCGATCAATTACATGTATCATCTATGCCCGGGTCCATCTTTTTAGATGTTTTTAGCTTGGTAAGATATTCTTTCATTACATTCTTTTTTATTTTATGGTCTAACTAAGTTTTATTTTGTTCGTTCAGGTTCGTGCTTCTGCTATCTTTATCCCGGAGTTCACGGATCTTCTAGATAGTGGTGGAAACTATCAATTTTCATATTCAATTCGCATGTCATTGCAGCCTGAAGGTTGCATCATGAATGGGATGACATTCAGCTCATGTCAATTGCATCTTAGACACTGGATAATTCGAGCTAATGACTATGTGGTTTCTAGAGTTAATGGAGAGGCTGTTATTGGAAAGGTAATTATATTATATGTAACTACATACACGGTAATTACATGTAACTACATACACGTAATTATATTATATGTAACTACATACACGTAATTATATTATATGTAACTACATACACGGTAATTACATGTAACTACATACACGTAATTATATTATATGTAACTACATACACGGTAATTACATGTAACTACATACACGTAATTATATTATATATGTAACTGCATACACGTAATCATATTATATGTAACTGCATACACGTAATCATATTATATGTAGCTGCATACACGTAATCATATTATATGTAGCTGCATACACGTAATCATATTATATGTAGCTGCATACACGTAATCATATTATATGTAGCTGCATACACGTAATCATATTATATGTAGCTGCATACACGTAATCATATTATATGTAGCTGCATACACGTAATCATATTATATGTAGCTGCATACACGTAATCATATTATATGTAGCTGCATACACGTAATCATATTATATGTAGCTGCATACACGTAATCATATTATATGTAGCTGCATACACGTAATCATATTATATGTAGCTGCATACACGTAATCATATTATATGTAGCTGCATACACGTAATCATATTATATGTAGCTGCATACACGTAATCATATTATATGTAGCTGCATACACGTAATCATATTATATGTAGCTGCATACACGTAATCATATTATATGTAGCTGCATACACGTAATCATATTATATGTAGCTGCATACACGTAATCATATTATATGTAGTTGCATACACGTAATCATATTATATGTAGTTGCAGACACGTAATTATATTATATGTAGCTGCATACACATATGTATTATATACAAATATATATATATATATATATATTATTATTTTTGGGATAATAAATCTGAGAGCAATTATATCTATTCTTATTCAAAAGGAATGATAACATCCAATTTGACTTCTCTCTCTTCTTATAACTTATTTATTCTTAATGTTATGTCTTTGATGATTGAATTTGTATTATCGAAACTTTGCTGACTAATATATGTTTTCATTGTAGTATCCCCTCTTGCAACCGGCTTTGATGATTGAATTTGTATTATCGAAACTTTGCTGACTAATATATGTTTTCATTGTAGTATCCCCTCTTGCAACCGGCTTTGATGATTGAATTTGTATTATCGAAACTTTGCTGACTAATATATGTTTTCATTGTAGTATCCCCTCTTGCAACCGGCTTTGATGATTGAATTTGTATTATCGAAACTTTGCTGACTAATATATGTTTTCATTGTAGTATCCCCTCTTGCAACCGGGAGAAAAAGAATTTGTTTACGAGAGTTGCTCATCTCTCCATTCATCCATGGGCTCCATTGAAGGGTCTTTTACATTTGTCCCCGGCAGGTAATCTATTTTCTGATTTTTTTTTTCTGATTTTGGGATCATTAACGACTTGTCCATCACCGTCCATCACCCTAGCGTGAATATGAATTTCCCCTAATAGGCCACGACTTGTCCATAACCTCGTAATATGAATGTCTTCTAATAGCCATAGTAAATAGTAGGAAAAATAGCCATAGGAAATAGTAGGAAATGTAACTTTTAGAAAATGAGTACGGGTACGGATTGTCATAGATTTAAGTCATAAAAGTTTTCATTTACTTCTGGATCCAAATCAACTTATGATTTAATAAATTAAAAGTTAAGCCAGGTTAGCGGTTGGTTGAGTTTCTACTAGAAATGATGTCTCTCTCGTATACTCTGCGTTCATAGTCTTAGGTCATTCCCGCATTCCCCCTCCAAACAATGTAGGTATATCTGCATTTTCTTTTTGTTCGTGTACATTTAGTCCCTTTCTATTCTATATAGCTAAGTTGTGTTGAAATAATTTTTCAGTTTGACATATCAGAAAGGCAGCCCATTTGAAGTTCAAGTGGCAAGGTTCCCTCTACAGGTTCCAACCTACATCTTCTAATGTACAAAGAATCTTTTGAGTACAAAGAATCTTTTGTGTACTCACGTTTGTTTGTGCATACAAATAATTATACTGAGAGATGAAACTTGGAACTTTGGGTCTGTTTTGTGATGTTTTCATCTGTCTCACTTTTATAACTCGAAACAACACAAGACCCGTTTAGTAATTTCCATTTTGGTTTTTGATCTCATTTTGGTTTATGATCC

mRNA sequence

TGGGTTCCCATCATTTTAATAATAAGCGAAATTCGTCAGTACCCAAAGCCAAGGGAATGTGTCGAAGCTGACACACGGATTCTCCATATCTACACCGATTAGAGGCGGCACCGCTTCCACTGAGTTCGTCGGAATCAGCAATGGATGTCGAGGCGTTGGGCGATCTTGCGCTTCACTTGATTTTCGCGAAATTAAGCCCTAAAGACTCTGCCATCGCCGCTTGTGTTAGCCGCAAATTCAGGTCCTCAGCGTCCGAAGATTCTCTGTGGGAGAAATTCTGCCATCGGGACCTCGGCCTCACCGACCCAATCGATCATTTGGGAAACCCTGTTCCGTCATTCAAGGAGAGTTATCAAGAATGGCGGAGAGCTTTTGGGATGTATCCATGGCCTCTGGTCGAGCGAGTTAAGCGATGTTGGGATAGAATCGAAAACTGGTTGCGTCATAATTATCCCGAGGCTCTGGTGACACTTAGGGAAGGTGCATCAGAAGCTGACATTGAAGATTTGGAAAATGCTTTGAAAGTGAAGCTACCTCTTCCAACGAGGATTCTTTATCGTTTTCATAATGGTCAAGATTTGAAAGGCAGATATGTTGATAGTGTTCGAGGCTTCCCGTTCGGTTTAATTGGGGGATATACATTCTATGAACAGACGGTAAATGTTTATTTGTTGCCTTTGAGACAAGTGATCACTGAAACGAAATCAATCATTCAAGAACTTGGTTTCTCGAGGAGATCTAAATTCATTGTTGTAGCTTCGTCTTCTACGCTCGTTCATAAGGTTTTTTTCCTTAATTGTGCTTCGGGTCAACTCTTTGTGGGTACTGCAAATCTTCGAGAAGATGGAGAAATGATTCCTTGTGTACCTAGTGCATTGATAAACTCGGTGCATGAGTATAACACAGACCAACAACAAGATGCTATGTTATTATGGCTAGAAGAGCATGTTCGACGCTTAGAAAATGGTATTATCAAGCTTCGTGAAACTAATAACATTAGGAGCATCTCTCTTTTTCCGGAAGAACCTCCCTTTTGCTCTGTTGCAACAACCAATGGTGTTCGTGTTCGTGCTTCTGCTATCTTTATCCCGGAGTTCACGGATCTTCTAGATAGTGGTGGAAACTATCAATTTTCATATTCAATTCGCATGTCATTGCAGCCTGAAGGTTGCATCATGAATGGGATGACATTCAGCTCATGTCAATTGCATCTTAGACACTGGATAATTCGAGCTAATGACTATGTGTATCCCCTCTTGCAACCGGGAGAAAAAGAATTTGTTTACGAGAGTTGCTCATCTCTCCATTCATCCATGGGCTCCATTGAAGGGTCTTTTACATTTGTCCCCGGCAGTTTGACATATCAGAAAGGCAGCCCATTTGAAGTTCAAGTGGCAAGGTTCCCTCTACAGGTTCCAACCTACATCTTCTAATGTACAAAGAATCTTTTGAGTACAAAGAATCTTTTGTGTACTCACGTTTGTTTGTGCATACAAATAATTATACTGAGAGATGAAACTTGGAACTTTGGGTCTGTTTTGTGATGTTTTCATCTGTCTCACTTTTATAACTCGAAACAACACAAGACCCGTTTAGTAATTTCCATTTTGGTTTTTGATCTCATTTTGGTTTATGATCC

Coding sequence (CDS)

ATGGATGTCGAGGCGTTGGGCGATCTTGCGCTTCACTTGATTTTCGCGAAATTAAGCCCTAAAGACTCTGCCATCGCCGCTTGTGTTAGCCGCAAATTCAGGTCCTCAGCGTCCGAAGATTCTCTGTGGGAGAAATTCTGCCATCGGGACCTCGGCCTCACCGACCCAATCGATCATTTGGGAAACCCTGTTCCGTCATTCAAGGAGAGTTATCAAGAATGGCGGAGAGCTTTTGGGATGTATCCATGGCCTCTGGTCGAGCGAGTTAAGCGATGTTGGGATAGAATCGAAAACTGGTTGCGTCATAATTATCCCGAGGCTCTGGTGACACTTAGGGAAGGTGCATCAGAAGCTGACATTGAAGATTTGGAAAATGCTTTGAAAGTGAAGCTACCTCTTCCAACGAGGATTCTTTATCGTTTTCATAATGGTCAAGATTTGAAAGGCAGATATGTTGATAGTGTTCGAGGCTTCCCGTTCGGTTTAATTGGGGGATATACATTCTATGAACAGACGGTAAATGTTTATTTGTTGCCTTTGAGACAAGTGATCACTGAAACGAAATCAATCATTCAAGAACTTGGTTTCTCGAGGAGATCTAAATTCATTGTTGTAGCTTCGTCTTCTACGCTCGTTCATAAGGTTTTTTTCCTTAATTGTGCTTCGGGTCAACTCTTTGTGGGTACTGCAAATCTTCGAGAAGATGGAGAAATGATTCCTTGTGTACCTAGTGCATTGATAAACTCGGTGCATGAGTATAACACAGACCAACAACAAGATGCTATGTTATTATGGCTAGAAGAGCATGTTCGACGCTTAGAAAATGGTATTATCAAGCTTCGTGAAACTAATAACATTAGGAGCATCTCTCTTTTTCCGGAAGAACCTCCCTTTTGCTCTGTTGCAACAACCAATGGTGTTCGTGTTCGTGCTTCTGCTATCTTTATCCCGGAGTTCACGGATCTTCTAGATAGTGGTGGAAACTATCAATTTTCATATTCAATTCGCATGTCATTGCAGCCTGAAGGTTGCATCATGAATGGGATGACATTCAGCTCATGTCAATTGCATCTTAGACACTGGATAATTCGAGCTAATGACTATGTGTATCCCCTCTTGCAACCGGGAGAAAAAGAATTTGTTTACGAGAGTTGCTCATCTCTCCATTCATCCATGGGCTCCATTGAAGGGTCTTTTACATTTGTCCCCGGCAGTTTGACATATCAGAAAGGCAGCCCATTTGAAGTTCAAGTGGCAAGGTTCCCTCTACAGGTTCCAACCTACATCTTCTAA

Protein sequence

MDVEALGDLALHLIFAKLSPKDSAIAACVSRKFRSSASEDSLWEKFCHRDLGLTDPIDHLGNPVPSFKESYQEWRRAFGMYPWPLVERVKRCWDRIENWLRHNYPEALVTLREGASEADIEDLENALKVKLPLPTRILYRFHNGQDLKGRYVDSVRGFPFGLIGGYTFYEQTVNVYLLPLRQVITETKSIIQELGFSRRSKFIVVASSSTLVHKVFFLNCASGQLFVGTANLREDGEMIPCVPSALINSVHEYNTDQQQDAMLLWLEEHVRRLENGIIKLRETNNIRSISLFPEEPPFCSVATTNGVRVRASAIFIPEFTDLLDSGGNYQFSYSIRMSLQPEGCIMNGMTFSSCQLHLRHWIIRANDYVYPLLQPGEKEFVYESCSSLHSSMGSIEGSFTFVPGSLTYQKGSPFEVQVARFPLQVPTYIF

Homology

[Close]

BLAST of Cp4.1LG03g12360 vs. ExPASy Swiss-Prot
Match: Q9LND7 (F-box protein SKIP16 OS=Arabidopsis thaliana OX=3702 GN=SKIP16 PE=1 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 6.9e-144
Identity = 248/443 (55.98%), Postives = 325/443 (73.36%), Query Frame = 0


Query: 1   MDVEALGDLALHLIFAKLSPKDSAIAACVSRKFRSSASEDSLWEKFCHRDLGLTDPIDHL 60
           M +E  GDL LH++ +K+ P+++A  ACVS++ + SASE+SLW  FC  DL ++ P+D  
Sbjct: 1   MGLEDAGDLVLHIVLSKIGPENTARVACVSKRLKVSASEESLWSIFCSNDLNISTPLDPH 60

Query: 61  GNPVPSFKESYQEWRRAFGMYPWPLVERVKRCWDRIENWLRHNYPEALVTLREGASEADI 120
           G+P PSFK +YQ WR +F MYPW LV+RV+ CWD ++ WL  N+PEA  TLR+G +E D+
Sbjct: 61  GDPAPSFKRAYQLWRESFRMYPWNLVKRVRLCWDNLKQWLTLNFPEAKATLRKGVTEDDL 120

Query: 121 EDLENALKVKLPLPTRILYRFHNGQDLKGRYVDSVRGFPFGLIGGYTFYEQTVNVYLLPL 180
           ++ E +LKVKLPLPTR+LYRF +GQ+L     + + G   GLIGGY+ Y   VNVYLLPL
Sbjct: 121 QEFETSLKVKLPLPTRLLYRFVDGQELSS--PNGLDG-SLGLIGGYSAYSHDVNVYLLPL 180

Query: 181 RQVITETK-SIIQELGFSRRSKFIVVASSSTLVHKVFFLNCASGQLFVGTANLREDGEMI 240
           ++V+ ETK S +++LGFS R   IV+A+S     K+F L+C +GQLF GT+N     +++
Sbjct: 181 KEVMRETKESFMRDLGFSSRLDLIVMAASVVASLKIFLLDCTTGQLFTGTSN----RQLL 240

Query: 241 PCVPSALINSVHEYNTDQQQDAMLLWLEEHVRRLENGIIKLRETNNIRSISLFPEEPPFC 300
           PCVP AL+ SVH+ N DQQQDAMLLWLEEH RRL+ G I +R+ NN++SISLFPE PP C
Sbjct: 241 PCVPDALVRSVHDTNGDQQQDAMLLWLEEHGRRLQTGTINVRQQNNVKSISLFPEIPPLC 300

Query: 301 SVATTNGVRVRASAIFIPEFTDLLDSGGNYQFSYSIRMSLQPEGCIMNGMTFSSCQLHLR 360
           SV+ TNGV+VRAS++FIPE ++L D    Y ++YSIRMSL PEGCI+NG   SSCQL+ R
Sbjct: 301 SVSVTNGVQVRASSVFIPEISNLRDQPPAYWYAYSIRMSLMPEGCILNGTHHSSCQLYWR 360

Query: 361 HWIIRANDYV------------YPLLQPGEKEFVYESCSSLHSSMGSIEGSFTFVPGSLT 420
           HW+IRA++ V            YPLLQ GE+EFVYESCSS  ++ GSI+GSFTFVPGSL 
Sbjct: 361 HWVIRADNEVIDNVNGEAVIGKYPLLQAGEEEFVYESCSSFPTTAGSIDGSFTFVPGSLR 420

Query: 421 YQKGSPFEVQVARFPLQVPTYIF 431
             KGS FEV+V  FPL++P YIF
Sbjct: 421 DPKGSQFEVKVVEFPLELPDYIF 436

[Close]

BLAST of Cp4.1LG03g12360 vs. ExPASy Swiss-Prot
Match: Q9UK99 (F-box only protein 3 OS=Homo sapiens OX=9606 GN=FBXO3 PE=1 SV=3)

HSP 1 Score: 105.9 bits (263), Expect = 1.1e-21
Identity = 105/442 (23.76%), Postives = 176/442 (39.82%), Query Frame = 0


Query: 1   MDVEALGDLALHLIFAKLSPKDSAIAACVSRKFRSSASEDSLWEKFCHRDLGLTDPIDHL 60
           + +E+L    L LI + L  +D      VSR+    +S D LW + C +   +++     
Sbjct: 11  LTLESLPTDPLLLILSFLDYRDLINCCYVSRRLSQLSSHDPLWRRHCKKYWLISEEEKTQ 70

Query: 61  GNPV--PSFKESYQEWRRAFGMYPWPLVERVKRCWDRIENWLRHNYPEALVTLREGASEA 120
            N      F ++Y +  R    Y       +K+ WD ++ +L    P  +++L+EGA E 
Sbjct: 71  KNQCWKSLFIDTYSDVGRYIDHY-----AAIKKAWDDLKKYLEPRCPRMVLSLKEGAREE 130

Query: 121 DIEDLENALKVKLPLPTRILYRFHNGQDLKGRYVDSVRGFPFGLIGGYTFYEQTVNVYLL 180
           D++ +E  +  KLP   R  YR HNGQ L             GL+G         +  LL
Sbjct: 131 DLDAVEAQIGCKLPDDYRCSYRIHNGQKL----------VVPGLLGSMALSNHYRSEDLL 190

Query: 181 PLRQVITETKSIIQELGFSRRSKFIVVASSSTLVHKVFFLNCASGQLFVGTANLREDGEM 240
            +              GF +R         +  +H        S  + V  A  R   E+
Sbjct: 191 DVDTAAG---------GFQQRQGLKYCLPLTFCIH-----TGLSQYIAVEAAEGRNKNEV 250

Query: 241 IPCVPSALINSVHEYNTDQQQDAMLLWLEEHVRRLENGIIKLRETNNIRSISLFPEEPPF 300
               P  +  +    +          W   +V+ + +G   +      R +       P 
Sbjct: 251 FYQCPDQMARNPAAIDMFIIGATFTDWFTSYVKNVVSGGFPIIRDQIFRYV-----HDPE 310

Query: 301 CSVATTNGVRVRASAIFIPEFTDLLDSGGNYQFSYSIRMSLQPEGCIMNGMTFSSCQLHL 360
           C VATT  + V  S  F+PE + +     +Y F+Y IR+ +  +      +   +CQL  
Sbjct: 311 C-VATTGDITVSVSTSFLPELSSV--HPPHYFFTYRIRIEMSKD-----ALPEKACQLDS 370

Query: 361 RHW-IIRANDYV-----------YPLLQPGEKEFVYESCSSLHSSMGSIEGSFTFVPGSL 420
           R+W I  A   V           +P++ PG + + Y SC++  ++ G +EG +TF     
Sbjct: 371 RYWRITNAKGDVEEVQGPGVVGEFPIISPG-RVYEYTSCTTFSTTSGYMEGYYTF---HF 406

Query: 421 TYQKGSPFEVQVARFPLQVPTY 429
            Y K   F V + RF +  PT+
Sbjct: 431 LYFKDKIFNVAIPRFHMACPTF 406

[Close]

BLAST of Cp4.1LG03g12360 vs. ExPASy Swiss-Prot
Match: A6H7H7 (F-box only protein 3 OS=Bos taurus OX=9913 GN=FBXO3 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 3.3e-21
Identity = 105/442 (23.76%), Postives = 175/442 (39.59%), Query Frame = 0


Query: 1   MDVEALGDLALHLIFAKLSPKDSAIAACVSRKFRSSASEDSLWEKFCHRDLGLTDPIDHL 60
           + +E+L    L LI + L  +D      VSR+    +S D LW + C +   +++     
Sbjct: 11  LTLESLPTDPLLLILSFLDYRDLINCCYVSRRLSQLSSHDPLWRRHCKKYWLISEEEKTQ 70

Query: 61  GNPV--PSFKESYQEWRRAFGMYPWPLVERVKRCWDRIENWLRHNYPEALVTLREGASEA 120
            N      F ++Y +  R    Y       +K+ WD ++ +L    P  +++L+EGA E 
Sbjct: 71  KNQCWKSLFIDTYSDVGRYIDHY-----AAIKKAWDDLKKYLEPRCPRMVLSLKEGAREE 130

Query: 121 DIEDLENALKVKLPLPTRILYRFHNGQDLKGRYVDSVRGFPFGLIGGYTFYEQTVNVYLL 180
           D++ +E  +  KLP   R  YR HNGQ L             GL+G         +  LL
Sbjct: 131 DLDAVEAQIGCKLPDDYRCSYRIHNGQKL----------VVPGLLGSMALSNHYRSEDLL 190

Query: 181 PLRQVITETKSIIQELGFSRRSKFIVVASSSTLVHKVFFLNCASGQLFVGTANLREDGEM 240
            +              GF +R         +  +H        S  + V  A  R   E+
Sbjct: 191 DVDTAAG---------GFQQRQGLKSCLPLTFCIH-----TGLSQYIAVEAAEGRNKNEV 250

Query: 241 IPCVPSALINSVHEYNTDQQQDAMLLWLEEHVRRLENGIIKLRETNNIRSISLFPEEPPF 300
               P  +  +    +          W   +V  + +G   +      R +       P 
Sbjct: 251 FYQCPDQMARNPAAIDMFIIGATFTDWFTSYVNSVVSGGFPIIRDQIFRYV-----HDPE 310

Query: 301 CSVATTNGVRVRASAIFIPEFTDLLDSGGNYQFSYSIRMSLQPEGCIMNGMTFSSCQLHL 360
           C VATT  + V  S  F+PE + +     +Y F+Y IR+ +  +      +   +CQL  
Sbjct: 311 C-VATTGDITVSVSTSFLPELSSV--HPPHYFFTYRIRIEMSKD-----ALPEKACQLDS 370

Query: 361 RHW-IIRANDYV-----------YPLLQPGEKEFVYESCSSLHSSMGSIEGSFTFVPGSL 420
           R+W I  A   V           +P++ PG + + Y SC++  ++ G +EG +TF     
Sbjct: 371 RYWRITNAKGDVEEVQGPGVVGEFPIISPG-RVYEYTSCTTFSTTSGYMEGYYTF---HF 406

Query: 421 TYQKGSPFEVQVARFPLQVPTY 429
            Y K   F V + RF +  PT+
Sbjct: 431 LYFKDKIFNVAIPRFHMACPTF 406

[Close]

BLAST of Cp4.1LG03g12360 vs. ExPASy Swiss-Prot
Match: D4ABP9 (F-box only protein 3 OS=Rattus norvegicus OX=10116 GN=Fbxo3 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 7.4e-21
Identity = 105/442 (23.76%), Postives = 174/442 (39.37%), Query Frame = 0


Query: 1   MDVEALGDLALHLIFAKLSPKDSAIAACVSRKFRSSASEDSLWEKFCHRDLGLTDPIDHL 60
           + +E+L    L LI + +  +D      VSR+    ++ D LW + C +   +T+     
Sbjct: 11  LTLESLPTDPLLLILSFVDYRDLINCCYVSRRLSQLSTHDPLWRRHCKKYWLITEEEKAR 70

Query: 61  GNPV--PSFKESYQEWRRAFGMYPWPLVERVKRCWDRIENWLRHNYPEALVTLREGASEA 120
            N      F  +Y +  R    Y       +K+ WD ++ +L    P  +++L+EGA E 
Sbjct: 71  KNQCWKSLFIATYSDVGRYINHY-----AAIKKAWDDLKKYLEPRCPRMVLSLKEGAREE 130

Query: 121 DIEDLENALKVKLPLPTRILYRFHNGQDLKGRYVDSVRGFPFGLIGGYTFYEQTVNVYLL 180
           D++ +E  +  KLP   R  YR HNGQ L             GL+G         +  LL
Sbjct: 131 DLDAVEAQIGCKLPDDYRCSYRIHNGQKL----------VVPGLLGSMALSNHYRSEDLL 190

Query: 181 PLRQVITETKSIIQELGFSRRSKFIVVASSSTLVHKVFFLNCASGQLFVGTANLREDGEM 240
            +              GF +R         +  +H        S  + V  A  R   E+
Sbjct: 191 DVDTAAG---------GFQQRQGLKYCLPLTFCIH-----TGLSQYIAVEAAEGRNKNEV 250

Query: 241 IPCVPSALINSVHEYNTDQQQDAMLLWLEEHVRRLENGIIKLRETNNIRSISLFPEEPPF 300
               P  +  +    +          W   +V  + +G   +      R I       P 
Sbjct: 251 FYQCPDQMARNPAAIDMFIIGATFTDWFTSYVNNVVSGGFPIIRDQIFRYI-----HDPE 310

Query: 301 CSVATTNGVRVRASAIFIPEFTDLLDSGGNYQFSYSIRMSLQPEGCIMNGMTFSSCQLHL 360
           C VATT  + V  S  F+PE + +     +Y F+Y IR+ +       + +   +CQL  
Sbjct: 311 C-VATTGDITVSVSTSFLPELSSV--HPPHYFFTYRIRIEMS-----RDALPEKACQLDS 370

Query: 361 RHW-IIRANDYV-----------YPLLQPGEKEFVYESCSSLHSSMGSIEGSFTFVPGSL 420
           R+W I  A   V           +P++ PG + + Y SC++  ++ G +EG +TF     
Sbjct: 371 RYWRITNAKGDVEEVQGPGVVGEFPIISPG-RIYEYTSCTTFSTTSGYMEGYYTF---HF 406

Query: 421 TYQKGSPFEVQVARFPLQVPTY 429
            Y K   F V + RF +  PT+
Sbjct: 431 LYFKDKVFNVAIPRFHMACPTF 406

[Close]

BLAST of Cp4.1LG03g12360 vs. ExPASy Swiss-Prot
Match: Q9DC63 (F-box only protein 3 OS=Mus musculus OX=10090 GN=Fbxo3 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.1e-19
Identity = 105/443 (23.70%), Postives = 173/443 (39.05%), Query Frame = 0


Query: 1   MDVEALGDLALHLIFAKLSPKDSAIAACVSRKFRSSASEDSLWEKFCHRDLGLTDPIDHL 60
           + +E+L    L LI + +  +D      VSR+    ++ D LW + C +   L    +  
Sbjct: 11  LTLESLPTDPLLLILSFVDYRDLINCCYVSRRLSQLSTHDPLWRRHC-KKYWLISEEEKA 70

Query: 61  GNPV---PSFKESYQEWRRAFGMYPWPLVERVKRCWDRIENWLRHNYPEALVTLREGASE 120
           G        F E+Y +  R    Y       +K+ W  ++ +L    P  +++L+EGA E
Sbjct: 71  GKSQCWRSLFIETYSDVGRYIDHY-----AAIKKAWRDLKKYLEPRCPRMVLSLKEGARE 130

Query: 121 ADIEDLENALKVKLPLPTRILYRFHNGQDLKGRYVDSVRGFPFGLIGGYTFYEQTVNVYL 180
            D++ +E  +  KLP   R  YR HNGQ L             GL+G         +  L
Sbjct: 131 EDLDAVEAQIGCKLPDDYRCSYRIHNGQKL----------VVPGLLGSMALSNHYRSEDL 190

Query: 181 LPLRQVITETKSIIQELGFSRRSKFIVVASSSTLVHKVFFLNCASGQLFVGTANLREDGE 240
           L +              GF +R         +  +H        S  + V  A  R   E
Sbjct: 191 LDVDTAAG---------GFQQRQGLKYCLPLTFCIH-----TGLSQYIAVEAAEGRNKNE 250

Query: 241 MIPCVPSALINSVHEYNTDQQQDAMLLWLEEHVRRLENGIIKLRETNNIRSISLFPEEPP 300
           +    P  +  +    +          W   +V  + +G   +      R I       P
Sbjct: 251 VFYQCPDQMARNPAAIDMFIIGATFTDWFTSYVNNVVSGGFPIIRDQIFRYI-----HDP 310

Query: 301 FCSVATTNGVRVRASAIFIPEFTDLLDSGGNYQFSYSIRMSLQPEGCIMNGMTFSSCQLH 360
            C VATT  + V  S  F+PE + +     +Y F+Y IR+ +       + +   +CQL 
Sbjct: 311 EC-VATTGDITVSVSTSFLPELSSV--HPPHYFFTYRIRIEMS-----RDALPEKACQLD 370

Query: 361 LRHW-IIRANDYV-----------YPLLQPGEKEFVYESCSSLHSSMGSIEGSFTFVPGS 420
            R+W I  A   V           +P++ PG + + Y SC++  ++ G +EG +TF    
Sbjct: 371 SRYWRITNAKGDVEEVQGPGVVGEFPIISPG-RIYEYTSCTTFSTTSGYMEGYYTF---H 406

Query: 421 LTYQKGSPFEVQVARFPLQVPTY 429
             Y K   F V + RF +  PT+
Sbjct: 431 FLYFKDKVFNVAIPRFHMACPTF 406

[Close]

BLAST of Cp4.1LG03g12360 vs. NCBI nr
Match: XP_023528493.1 (F-box protein SKIP16 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 878 bits (2268), Expect = 0.0
Identity = 430/442 (97.29%), Postives = 430/442 (97.29%), Query Frame = 0


Query: 1   MDVEALGDLALHLIFAKLSPKDSAIAACVSRKFRSSASEDSLWEKFCHRDLGLTDPIDHL 60
           MDVEALGDLALHLIFAKLSPKDSAIAACVSRKFRSSASEDSLWEKFCHRDLGLTDPIDHL
Sbjct: 1   MDVEALGDLALHLIFAKLSPKDSAIAACVSRKFRSSASEDSLWEKFCHRDLGLTDPIDHL 60

Query: 61  GNPVPSFKESYQEWRRAFGMYPWPLVERVKRCWDRIENWLRHNYPEALVTLREGASEADI 120
           GNPVPSFKESYQEWRRAFGMYPWPLVERVKRCWDRIENWLRHNYPEALVTLREGASEADI
Sbjct: 61  GNPVPSFKESYQEWRRAFGMYPWPLVERVKRCWDRIENWLRHNYPEALVTLREGASEADI 120

Query: 121 EDLENALKVKLPLPTRILYRFHNGQDLKGRYVDSVRGFPFGLIGGYTFYEQTVNVYLLPL 180
           EDLENALKVKLPLPTRILYRFHNGQDLKGRYVDSVRGFPFGLIGGYTFYEQTVNVYLLPL
Sbjct: 121 EDLENALKVKLPLPTRILYRFHNGQDLKGRYVDSVRGFPFGLIGGYTFYEQTVNVYLLPL 180

Query: 181 RQVITETKSIIQELGFSRRSKFIVVASSSTLVHKVFFLNCASGQLFVGTANLREDGEMIP 240
           RQVITETKSIIQELGFSRRSKFIVVASSSTLVHKVFFLNCASGQLFVGTANLREDGEMIP
Sbjct: 181 RQVITETKSIIQELGFSRRSKFIVVASSSTLVHKVFFLNCASGQLFVGTANLREDGEMIP 240

Query: 241 CVPSALINSVHEYNTDQQQDAMLLWLEEHVRRLENGIIKLRETNNIRSISLFPEEPPFCS 300
           CVPSALINSVHEYNTDQQQDAMLLWLEEHVRRLENGIIKLRETNNIRSISLFPEEPPFCS
Sbjct: 241 CVPSALINSVHEYNTDQQQDAMLLWLEEHVRRLENGIIKLRETNNIRSISLFPEEPPFCS 300

Query: 301 VATTNGVRVRASAIFIPEFTDLLDSGGNYQFSYSIRMSLQPEGCIMNGMTFSSCQLHLRH 360
           VATTNGVRVRASAIFIPEFTDLLDSGGNYQFSYSIRMSLQPEGCIMNGMTFSSCQLHLRH
Sbjct: 301 VATTNGVRVRASAIFIPEFTDLLDSGGNYQFSYSIRMSLQPEGCIMNGMTFSSCQLHLRH 360

Query: 361 WIIRANDYV------------YPLLQPGEKEFVYESCSSLHSSMGSIEGSFTFVPGSLTY 420
           WIIRANDYV            YPLLQPGEKEFVYESCSSLHSSMGSIEGSFTFVPGSLTY
Sbjct: 361 WIIRANDYVVSRVNGEAVIGKYPLLQPGEKEFVYESCSSLHSSMGSIEGSFTFVPGSLTY 420

Query: 421 QKGSPFEVQVARFPLQVPTYIF 430
           QKGSPFEVQVARFPLQVPTYIF
Sbjct: 421 QKGSPFEVQVARFPLQVPTYIF 442

[Close]

BLAST of Cp4.1LG03g12360 vs. NCBI nr
Match: XP_022956186.1 (F-box protein SKIP16 [Cucurbita moschata])

HSP 1 Score: 863 bits (2229), Expect = 1.74e-315
Identity = 423/442 (95.70%), Postives = 427/442 (96.61%), Query Frame = 0


Query: 1   MDVEALGDLALHLIFAKLSPKDSAIAACVSRKFRSSASEDSLWEKFCHRDLGLTDPIDHL 60
           M+VEALGDLALHLIFAKLSPKDSAIAACVSRKFRSSASEDSLWEKFCHRDLGLTDPIDHL
Sbjct: 1   MEVEALGDLALHLIFAKLSPKDSAIAACVSRKFRSSASEDSLWEKFCHRDLGLTDPIDHL 60

Query: 61  GNPVPSFKESYQEWRRAFGMYPWPLVERVKRCWDRIENWLRHNYPEALVTLREGASEADI 120
           GNPVPSFKESYQEWRRAFGMYPWPLVERVKRCWDRIENWLR NYPEALVTLREGASEADI
Sbjct: 61  GNPVPSFKESYQEWRRAFGMYPWPLVERVKRCWDRIENWLRSNYPEALVTLREGASEADI 120

Query: 121 EDLENALKVKLPLPTRILYRFHNGQDLKGRYVDSVRGFPFGLIGGYTFYEQTVNVYLLPL 180
           E+LENALKVKLPLPTRILYRFHNGQDLKGRYVDSVRGFPFGLIGGYTFYEQTVNVYLL L
Sbjct: 121 EELENALKVKLPLPTRILYRFHNGQDLKGRYVDSVRGFPFGLIGGYTFYEQTVNVYLLHL 180

Query: 181 RQVITETKSIIQELGFSRRSKFIVVASSSTLVHKVFFLNCASGQLFVGTANLREDGEMIP 240
           RQVITETKSIIQELGFSRRSKFIVVASSSTLVHKVFFLNCASGQLFVGTANLREDGEMIP
Sbjct: 181 RQVITETKSIIQELGFSRRSKFIVVASSSTLVHKVFFLNCASGQLFVGTANLREDGEMIP 240

Query: 241 CVPSALINSVHEYNTDQQQDAMLLWLEEHVRRLENGIIKLRETNNIRSISLFPEEPPFCS 300
           CVP ALINSVHEYNTDQQQDAMLLWLEEHVRRLENGIIKLRETNNIRSISLFPEEPPFCS
Sbjct: 241 CVPGALINSVHEYNTDQQQDAMLLWLEEHVRRLENGIIKLRETNNIRSISLFPEEPPFCS 300

Query: 301 VATTNGVRVRASAIFIPEFTDLLDSGGNYQFSYSIRMSLQPEGCIMNGMTFSSCQLHLRH 360
           VATTNGVRVRASAIFIPEFTDLLDSGGNYQFSYSIRMSLQPEGCIM+GMTFSSCQLHLRH
Sbjct: 301 VATTNGVRVRASAIFIPEFTDLLDSGGNYQFSYSIRMSLQPEGCIMDGMTFSSCQLHLRH 360

Query: 361 WIIRANDYV------------YPLLQPGEKEFVYESCSSLHSSMGSIEGSFTFVPGSLTY 420
           WIIRANDYV            YPLLQPGEKEFVYESCSSLHSSMGSIEGSFTFVPGSLTY
Sbjct: 361 WIIRANDYVVSRVNGEAVIGKYPLLQPGEKEFVYESCSSLHSSMGSIEGSFTFVPGSLTY 420

Query: 421 QKGSPFEVQVARFPLQVPTYIF 430
           Q+GSPFEVQVARFPLQVPTYIF
Sbjct: 421 QEGSPFEVQVARFPLQVPTYIF 442

[Close]

BLAST of Cp4.1LG03g12360 vs. NCBI nr
Match: XP_022979795.1 (F-box protein SKIP16 [Cucurbita maxima])

HSP 1 Score: 856 bits (2211), Expect = 5.32e-313
Identity = 418/442 (94.57%), Postives = 427/442 (96.61%), Query Frame = 0


Query: 1   MDVEALGDLALHLIFAKLSPKDSAIAACVSRKFRSSASEDSLWEKFCHRDLGLTDPIDHL 60
           M+VEALGDLALHLIFAKLSPKDSAIAACVSRKFRSSASEDSLWEKFC+RDLGLTDPIDHL
Sbjct: 1   MEVEALGDLALHLIFAKLSPKDSAIAACVSRKFRSSASEDSLWEKFCNRDLGLTDPIDHL 60

Query: 61  GNPVPSFKESYQEWRRAFGMYPWPLVERVKRCWDRIENWLRHNYPEALVTLREGASEADI 120
           GNPVPSFKESYQEWRRAFGMYPWPLVERVKRCWDRIENWLR+NYPEALVTLREGASE DI
Sbjct: 61  GNPVPSFKESYQEWRRAFGMYPWPLVERVKRCWDRIENWLRNNYPEALVTLREGASEDDI 120

Query: 121 EDLENALKVKLPLPTRILYRFHNGQDLKGRYVDSVRGFPFGLIGGYTFYEQTVNVYLLPL 180
           ++LENALKVKLPLPTRILYRFHNGQDLKGRYVDSVRGFP+GLIGGYTFYEQTVNVYLLPL
Sbjct: 121 QELENALKVKLPLPTRILYRFHNGQDLKGRYVDSVRGFPYGLIGGYTFYEQTVNVYLLPL 180

Query: 181 RQVITETKSIIQELGFSRRSKFIVVASSSTLVHKVFFLNCASGQLFVGTANLREDGEMIP 240
           RQVITETKSIIQELGFSRRSKFIVVASSSTLVHKVFFLNCASGQLFVGTANLREDGEMIP
Sbjct: 181 RQVITETKSIIQELGFSRRSKFIVVASSSTLVHKVFFLNCASGQLFVGTANLREDGEMIP 240

Query: 241 CVPSALINSVHEYNTDQQQDAMLLWLEEHVRRLENGIIKLRETNNIRSISLFPEEPPFCS 300
           CVP ALINSVHEYNTDQQQDAMLLWLEEHV+RLENGIIKLRETNNIRSISLFPEEPPFCS
Sbjct: 241 CVPGALINSVHEYNTDQQQDAMLLWLEEHVQRLENGIIKLRETNNIRSISLFPEEPPFCS 300

Query: 301 VATTNGVRVRASAIFIPEFTDLLDSGGNYQFSYSIRMSLQPEGCIMNGMTFSSCQLHLRH 360
           VATTNGVRVRASAIFIPEFTDLLDSGGNYQFSYSIRMSLQPEGCIMNGMTFSSCQLHLRH
Sbjct: 301 VATTNGVRVRASAIFIPEFTDLLDSGGNYQFSYSIRMSLQPEGCIMNGMTFSSCQLHLRH 360

Query: 361 WIIRANDYV------------YPLLQPGEKEFVYESCSSLHSSMGSIEGSFTFVPGSLTY 420
           WIIRANDYV            YPLLQPGEKEFVYESCSSLHSSMGSIEGSFTFVPGSLTY
Sbjct: 361 WIIRANDYVVSRVNGEAVIGKYPLLQPGEKEFVYESCSSLHSSMGSIEGSFTFVPGSLTY 420

Query: 421 QKGSPFEVQVARFPLQVPTYIF 430
           Q+GSPFEVQV+RFPLQV TYIF
Sbjct: 421 QEGSPFEVQVSRFPLQVTTYIF 442

[Close]

BLAST of Cp4.1LG03g12360 vs. NCBI nr
Match: KAG6582096.1 (F-box protein SKIP16, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 818 bits (2114), Expect = 3.62e-298
Identity = 400/417 (95.92%), Postives = 403/417 (96.64%), Query Frame = 0


Query: 1   MDVEALGDLALHLIFAKLSPKDSAIAACVSRKFRSSASEDSLWEKFCHRDLGLTDPIDHL 60
           M+VEALGDLALHLIFAKLSPKDSAIAACVSRKFRSSASEDSLWEKFCHRDLGLTDPIDHL
Sbjct: 1   MEVEALGDLALHLIFAKLSPKDSAIAACVSRKFRSSASEDSLWEKFCHRDLGLTDPIDHL 60

Query: 61  GNPVPSFKESYQEWRRAFGMYPWPLVERVKRCWDRIENWLRHNYPEALVTLREGASEADI 120
           GNPVPSFKESYQEWRRAFGMYPWPLVERVKRCWDRIENWLR NYPEALVT+REGASEADI
Sbjct: 61  GNPVPSFKESYQEWRRAFGMYPWPLVERVKRCWDRIENWLRSNYPEALVTVREGASEADI 120

Query: 121 EDLENALKVKLPLPTRILYRFHNGQDLKGRYVDSVRGFPFGLIGGYTFYEQTVNVYLLPL 180
           E+LENALKVKLPLPTRILYRFHNGQDLKGRYVDSVRGFPFGLIGGYTFYEQTVNVYLLPL
Sbjct: 121 EELENALKVKLPLPTRILYRFHNGQDLKGRYVDSVRGFPFGLIGGYTFYEQTVNVYLLPL 180

Query: 181 RQVITETKSIIQELGFSRRSKFIVVASSSTLVHKVFFLNCASGQLFVGTANLREDGEMIP 240
           RQVITETKSIIQELGFSRRSKFIVVASSSTLVHKVFFLNCASGQLFVGTANLREDGEMIP
Sbjct: 181 RQVITETKSIIQELGFSRRSKFIVVASSSTLVHKVFFLNCASGQLFVGTANLREDGEMIP 240

Query: 241 CVPSALINSVHEYNTDQQQDAMLLWLEEHVRRLENGIIKLRETNNIRSISLFPEEPPFCS 300
           CVP ALINSVHEYNTDQQQDAMLLWLEEHVRRLENGIIKLRETNNIRSISLFPEEPPFCS
Sbjct: 241 CVPGALINSVHEYNTDQQQDAMLLWLEEHVRRLENGIIKLRETNNIRSISLFPEEPPFCS 300

Query: 301 VATTNGVRVRASAIFIPEFTDLLDSGGNYQFSYSIRMSLQPEGCIMNGMTFSSCQLHLRH 360
           VATTNGVRVRASAIFIPEFTDLLDSGGNYQFSYSIRMSLQPEGCIMNGMTFSSCQLHLRH
Sbjct: 301 VATTNGVRVRASAIFIPEFTDLLDSGGNYQFSYSIRMSLQPEGCIMNGMTFSSCQLHLRH 360

Query: 361 WIIRANDYV------------YPLLQPGEKEFVYESCSSLHSSMGSIEGSFTFVPGS 405
           WIIRANDYV            YPLLQPGEKEFVYESCSSLHSSMGSIEGSFTFVPGS
Sbjct: 361 WIIRANDYVVSRVNGEAVIGKYPLLQPGEKEFVYESCSSLHSSMGSIEGSFTFVPGS 417

[Close]

BLAST of Cp4.1LG03g12360 vs. NCBI nr
Match: XP_023528494.1 (F-box protein SKIP16 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 767 bits (1981), Expect = 1.18e-278
Identity = 375/388 (96.65%), Postives = 375/388 (96.65%), Query Frame = 0


Query: 1   MDVEALGDLALHLIFAKLSPKDSAIAACVSRKFRSSASEDSLWEKFCHRDLGLTDPIDHL 60
           MDVEALGDLALHLIFAKLSPKDSAIAACVSRKFRSSASEDSLWEKFCHRDLGLTDPIDHL
Sbjct: 1   MDVEALGDLALHLIFAKLSPKDSAIAACVSRKFRSSASEDSLWEKFCHRDLGLTDPIDHL 60

Query: 61  GNPVPSFKESYQEWRRAFGMYPWPLVERVKRCWDRIENWLRHNYPEALVTLREGASEADI 120
           GNPVPSFKESYQEWRRAFGMYPWPLVERVKRCWDRIENWLRHNYPEALVTLREGASEADI
Sbjct: 61  GNPVPSFKESYQEWRRAFGMYPWPLVERVKRCWDRIENWLRHNYPEALVTLREGASEADI 120

Query: 121 EDLENALKVKLPLPTRILYRFHNGQDLKGRYVDSVRGFPFGLIGGYTFYEQTVNVYLLPL 180
           EDLENALKVKLPLPTRILYRFHNGQDLKGRYVDSVRGFPFGLIGGYTFYEQTVNVYLLPL
Sbjct: 121 EDLENALKVKLPLPTRILYRFHNGQDLKGRYVDSVRGFPFGLIGGYTFYEQTVNVYLLPL 180

Query: 181 RQVITETKSIIQELGFSRRSKFIVVASSSTLVHKVFFLNCASGQLFVGTANLREDGEMIP 240
           RQVITETKSIIQELGFSRRSKFIVVASSSTLVHKVFFLNCASGQLFVGTANLREDGEMIP
Sbjct: 181 RQVITETKSIIQELGFSRRSKFIVVASSSTLVHKVFFLNCASGQLFVGTANLREDGEMIP 240

Query: 241 CVPSALINSVHEYNTDQQQDAMLLWLEEHVRRLENGIIKLRETNNIRSISLFPEEPPFCS 300
           CVPSALINSVHEYNTDQQQDAMLLWLEEHVRRLENGIIKLRETNNIRSISLFPEEPPFCS
Sbjct: 241 CVPSALINSVHEYNTDQQQDAMLLWLEEHVRRLENGIIKLRETNNIRSISLFPEEPPFCS 300

Query: 301 VATTNGVRVRASAIFIPEFTDLLDSGGNYQFSYSIRMSLQPEGCIMNGMTFSSCQLHLRH 360
           VATTNGVRVRASAIFIPEFTDLLDSGGNYQFSYSIRMSLQPEGCIMNGMTFSSCQLHLRH
Sbjct: 301 VATTNGVRVRASAIFIPEFTDLLDSGGNYQFSYSIRMSLQPEGCIMNGMTFSSCQLHLRH 360

Query: 361 WIIRANDYV------------YPLLQPG 376
           WIIRANDYV            YPLLQP 
Sbjct: 361 WIIRANDYVVSRVNGEAVIGKYPLLQPA 388

[Close]

BLAST of Cp4.1LG03g12360 vs. ExPASy TrEMBL
Match: A0A6J1GVV6 (F-box protein SKIP16 OS=Cucurbita moschata OX=3662 GN=LOC111457956 PE=4 SV=1)

HSP 1 Score: 863 bits (2229), Expect = 8.41e-316
Identity = 423/442 (95.70%), Postives = 427/442 (96.61%), Query Frame = 0


Query: 1   MDVEALGDLALHLIFAKLSPKDSAIAACVSRKFRSSASEDSLWEKFCHRDLGLTDPIDHL 60
           M+VEALGDLALHLIFAKLSPKDSAIAACVSRKFRSSASEDSLWEKFCHRDLGLTDPIDHL
Sbjct: 1   MEVEALGDLALHLIFAKLSPKDSAIAACVSRKFRSSASEDSLWEKFCHRDLGLTDPIDHL 60

Query: 61  GNPVPSFKESYQEWRRAFGMYPWPLVERVKRCWDRIENWLRHNYPEALVTLREGASEADI 120
           GNPVPSFKESYQEWRRAFGMYPWPLVERVKRCWDRIENWLR NYPEALVTLREGASEADI
Sbjct: 61  GNPVPSFKESYQEWRRAFGMYPWPLVERVKRCWDRIENWLRSNYPEALVTLREGASEADI 120

Query: 121 EDLENALKVKLPLPTRILYRFHNGQDLKGRYVDSVRGFPFGLIGGYTFYEQTVNVYLLPL 180
           E+LENALKVKLPLPTRILYRFHNGQDLKGRYVDSVRGFPFGLIGGYTFYEQTVNVYLL L
Sbjct: 121 EELENALKVKLPLPTRILYRFHNGQDLKGRYVDSVRGFPFGLIGGYTFYEQTVNVYLLHL 180

Query: 181 RQVITETKSIIQELGFSRRSKFIVVASSSTLVHKVFFLNCASGQLFVGTANLREDGEMIP 240
           RQVITETKSIIQELGFSRRSKFIVVASSSTLVHKVFFLNCASGQLFVGTANLREDGEMIP
Sbjct: 181 RQVITETKSIIQELGFSRRSKFIVVASSSTLVHKVFFLNCASGQLFVGTANLREDGEMIP 240

Query: 241 CVPSALINSVHEYNTDQQQDAMLLWLEEHVRRLENGIIKLRETNNIRSISLFPEEPPFCS 300
           CVP ALINSVHEYNTDQQQDAMLLWLEEHVRRLENGIIKLRETNNIRSISLFPEEPPFCS
Sbjct: 241 CVPGALINSVHEYNTDQQQDAMLLWLEEHVRRLENGIIKLRETNNIRSISLFPEEPPFCS 300

Query: 301 VATTNGVRVRASAIFIPEFTDLLDSGGNYQFSYSIRMSLQPEGCIMNGMTFSSCQLHLRH 360
           VATTNGVRVRASAIFIPEFTDLLDSGGNYQFSYSIRMSLQPEGCIM+GMTFSSCQLHLRH
Sbjct: 301 VATTNGVRVRASAIFIPEFTDLLDSGGNYQFSYSIRMSLQPEGCIMDGMTFSSCQLHLRH 360

Query: 361 WIIRANDYV------------YPLLQPGEKEFVYESCSSLHSSMGSIEGSFTFVPGSLTY 420
           WIIRANDYV            YPLLQPGEKEFVYESCSSLHSSMGSIEGSFTFVPGSLTY
Sbjct: 361 WIIRANDYVVSRVNGEAVIGKYPLLQPGEKEFVYESCSSLHSSMGSIEGSFTFVPGSLTY 420

Query: 421 QKGSPFEVQVARFPLQVPTYIF 430
           Q+GSPFEVQVARFPLQVPTYIF
Sbjct: 421 QEGSPFEVQVARFPLQVPTYIF 442

[Close]

BLAST of Cp4.1LG03g12360 vs. ExPASy TrEMBL
Match: A0A6J1IUC9 (F-box protein SKIP16 OS=Cucurbita maxima OX=3661 GN=LOC111479390 PE=4 SV=1)

HSP 1 Score: 856 bits (2211), Expect = 2.57e-313
Identity = 418/442 (94.57%), Postives = 427/442 (96.61%), Query Frame = 0


Query: 1   MDVEALGDLALHLIFAKLSPKDSAIAACVSRKFRSSASEDSLWEKFCHRDLGLTDPIDHL 60
           M+VEALGDLALHLIFAKLSPKDSAIAACVSRKFRSSASEDSLWEKFC+RDLGLTDPIDHL
Sbjct: 1   MEVEALGDLALHLIFAKLSPKDSAIAACVSRKFRSSASEDSLWEKFCNRDLGLTDPIDHL 60

Query: 61  GNPVPSFKESYQEWRRAFGMYPWPLVERVKRCWDRIENWLRHNYPEALVTLREGASEADI 120
           GNPVPSFKESYQEWRRAFGMYPWPLVERVKRCWDRIENWLR+NYPEALVTLREGASE DI
Sbjct: 61  GNPVPSFKESYQEWRRAFGMYPWPLVERVKRCWDRIENWLRNNYPEALVTLREGASEDDI 120

Query: 121 EDLENALKVKLPLPTRILYRFHNGQDLKGRYVDSVRGFPFGLIGGYTFYEQTVNVYLLPL 180
           ++LENALKVKLPLPTRILYRFHNGQDLKGRYVDSVRGFP+GLIGGYTFYEQTVNVYLLPL
Sbjct: 121 QELENALKVKLPLPTRILYRFHNGQDLKGRYVDSVRGFPYGLIGGYTFYEQTVNVYLLPL 180

Query: 181 RQVITETKSIIQELGFSRRSKFIVVASSSTLVHKVFFLNCASGQLFVGTANLREDGEMIP 240
           RQVITETKSIIQELGFSRRSKFIVVASSSTLVHKVFFLNCASGQLFVGTANLREDGEMIP
Sbjct: 181 RQVITETKSIIQELGFSRRSKFIVVASSSTLVHKVFFLNCASGQLFVGTANLREDGEMIP 240

Query: 241 CVPSALINSVHEYNTDQQQDAMLLWLEEHVRRLENGIIKLRETNNIRSISLFPEEPPFCS 300
           CVP ALINSVHEYNTDQQQDAMLLWLEEHV+RLENGIIKLRETNNIRSISLFPEEPPFCS
Sbjct: 241 CVPGALINSVHEYNTDQQQDAMLLWLEEHVQRLENGIIKLRETNNIRSISLFPEEPPFCS 300

Query: 301 VATTNGVRVRASAIFIPEFTDLLDSGGNYQFSYSIRMSLQPEGCIMNGMTFSSCQLHLRH 360
           VATTNGVRVRASAIFIPEFTDLLDSGGNYQFSYSIRMSLQPEGCIMNGMTFSSCQLHLRH
Sbjct: 301 VATTNGVRVRASAIFIPEFTDLLDSGGNYQFSYSIRMSLQPEGCIMNGMTFSSCQLHLRH 360

Query: 361 WIIRANDYV------------YPLLQPGEKEFVYESCSSLHSSMGSIEGSFTFVPGSLTY 420
           WIIRANDYV            YPLLQPGEKEFVYESCSSLHSSMGSIEGSFTFVPGSLTY
Sbjct: 361 WIIRANDYVVSRVNGEAVIGKYPLLQPGEKEFVYESCSSLHSSMGSIEGSFTFVPGSLTY 420

Query: 421 QKGSPFEVQVARFPLQVPTYIF 430
           Q+GSPFEVQV+RFPLQV TYIF
Sbjct: 421 QEGSPFEVQVSRFPLQVTTYIF 442

[Close]

BLAST of Cp4.1LG03g12360 vs. ExPASy TrEMBL
Match: A0A0A0L8A4 (ApaG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G174030 PE=4 SV=1)

HSP 1 Score: 744 bits (1921), Expect = 3.82e-269
Identity = 356/442 (80.54%), Postives = 397/442 (89.82%), Query Frame = 0


Query: 1   MDVEALGDLALHLIFAKLSPKDSAIAACVSRKFRSSASEDSLWEKFCHRDLGLTDPIDHL 60
           M++E + DL LHL+FAKL PKDSAIAACVSR+FRSSASEDSLW+KFC++DL LTDP+DHL
Sbjct: 1   MELEGVDDLFLHLVFAKLGPKDSAIAACVSRQFRSSASEDSLWKKFCNQDLNLTDPVDHL 60

Query: 61  GNPVPSFKESYQEWRRAFGMYPWPLVERVKRCWDRIENWLRHNYPEALVTLREGASEADI 120
           GNP+PSFKE+YQ WRRAFGMYPWPLV+RVKRCWDR++NWL  N+PEAL TLR+GASEADI
Sbjct: 61  GNPIPSFKETYQVWRRAFGMYPWPLVKRVKRCWDRLKNWLSTNFPEALRTLRDGASEADI 120

Query: 121 EDLENALKVKLPLPTRILYRFHNGQDLKGRYVDSVRGFPFGLIGGYTFYEQTVNVYLLPL 180
           E+LEN LKVKLPLPTRILYRFHNGQ+LKG YVDS+RGFP GLIGGYTFY +TVNVYLLPL
Sbjct: 121 EELENVLKVKLPLPTRILYRFHNGQELKGGYVDSIRGFPLGLIGGYTFYGETVNVYLLPL 180

Query: 181 RQVITETKSIIQELGFSRRSKFIVVASSSTLVHKVFFLNCASGQLFVGTANLREDGEMIP 240
           RQV+ ETKSII+++GFSR+SKFIVVASSST   KVFFLNCASGQLFVGTA LR+DGEMIP
Sbjct: 181 RQVVFETKSIIRDVGFSRKSKFIVVASSSTFTEKVFFLNCASGQLFVGTAKLRDDGEMIP 240

Query: 241 CVPSALINSVHEYNTDQQQDAMLLWLEEHVRRLENGIIKLRETNNIRSISLFPEEPPFCS 300
           CVP ALINSVHE NT+QQQDAMLLWLEEHVRRLENGIIKLRE  NIRSISLFPEEPP CS
Sbjct: 241 CVPGALINSVHECNTEQQQDAMLLWLEEHVRRLENGIIKLREIKNIRSISLFPEEPPLCS 300

Query: 301 VATTNGVRVRASAIFIPEFTDLLDSGGNYQFSYSIRMSLQPEGCIMNGMTFSSCQLHLRH 360
            A TNGVRVRASAIF+PE TD+LDS GN+QF+YSIRMSLQ EGCI+NGM F+SCQLHLRH
Sbjct: 301 TAVTNGVRVRASAIFLPESTDILDSSGNHQFAYSIRMSLQDEGCIINGMIFNSCQLHLRH 360

Query: 361 WIIRANDYV------------YPLLQPGEKEFVYESCSSLHSSMGSIEGSFTFVPGSLTY 420
           W +RAND+V            +PLL+PGE EFVYESCSSL+SS+GS+EGSFTFVPGSL Y
Sbjct: 361 WKVRANDHVISIVDGEAVIGKFPLLKPGE-EFVYESCSSLYSSVGSLEGSFTFVPGSLAY 420

Query: 421 QKGSPFEVQVARFPLQVPTYIF 430
            +GSPFEVQVARFPLQVPTYIF
Sbjct: 421 PEGSPFEVQVARFPLQVPTYIF 441

[Close]

BLAST of Cp4.1LG03g12360 vs. ExPASy TrEMBL
Match: A0A5D3DJ52 (F-box protein SKIP16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00230 PE=4 SV=1)

HSP 1 Score: 734 bits (1896), Expect = 2.64e-265
Identity = 350/442 (79.19%), Postives = 394/442 (89.14%), Query Frame = 0


Query: 1   MDVEALGDLALHLIFAKLSPKDSAIAACVSRKFRSSASEDSLWEKFCHRDLGLTDPIDHL 60
           M++E + DL+LHL+FAKL PKDSAIAACVSR+FRSSASEDSLW+KFC++DL LTDP+DHL
Sbjct: 3   MELEGVDDLSLHLVFAKLGPKDSAIAACVSRQFRSSASEDSLWKKFCNQDLNLTDPVDHL 62

Query: 61  GNPVPSFKESYQEWRRAFGMYPWPLVERVKRCWDRIENWLRHNYPEALVTLREGASEADI 120
           GNP+PSFKE+YQ WRRAFGMYPWPL++RVKRCWDR++NWL  N+PEAL TLR GASEADI
Sbjct: 63  GNPIPSFKETYQVWRRAFGMYPWPLLKRVKRCWDRLKNWLSTNFPEALETLRNGASEADI 122

Query: 121 EDLENALKVKLPLPTRILYRFHNGQDLKGRYVDSVRGFPFGLIGGYTFYEQTVNVYLLPL 180
           E+ EN LKVKLPLPTRILYRFH+GQ+LKG YVDS+RGFP GLIGGYTFY QTVNVYLLPL
Sbjct: 123 EEFENVLKVKLPLPTRILYRFHDGQELKGGYVDSIRGFPLGLIGGYTFYGQTVNVYLLPL 182

Query: 181 RQVITETKSIIQELGFSRRSKFIVVASSSTLVHKVFFLNCASGQLFVGTANLREDGEMIP 240
           RQV++ETKSIIQ++ FSR+SKFIVVASSST   KVFFLNCASGQLFVGTA LR+DGEMIP
Sbjct: 183 RQVVSETKSIIQDVDFSRKSKFIVVASSSTFTEKVFFLNCASGQLFVGTAKLRDDGEMIP 242

Query: 241 CVPSALINSVHEYNTDQQQDAMLLWLEEHVRRLENGIIKLRETNNIRSISLFPEEPPFCS 300
           CVP ALI SVHE NT+ QQDAMLLWLEEHVRRLENGIIKLRE  NIRSISLFPEEPP CS
Sbjct: 243 CVPGALIKSVHECNTEHQQDAMLLWLEEHVRRLENGIIKLREIKNIRSISLFPEEPPLCS 302

Query: 301 VATTNGVRVRASAIFIPEFTDLLDSGGNYQFSYSIRMSLQPEGCIMNGMTFSSCQLHLRH 360
            A T+GV VRASA+F+PE TD+LDS GN+QF+YSIRMSLQ EGCI+NGMTF+SCQLHLRH
Sbjct: 303 TAITDGVCVRASAVFLPELTDILDSSGNHQFAYSIRMSLQDEGCIINGMTFNSCQLHLRH 362

Query: 361 WIIRANDYV------------YPLLQPGEKEFVYESCSSLHSSMGSIEGSFTFVPGSLTY 420
           W +RAND+V            +PLL+PGE EFVYESCSSL+SS+GS+EGSFTFVPGSL Y
Sbjct: 363 WKVRANDHVVSVVNGEAVIGKFPLLKPGE-EFVYESCSSLYSSVGSLEGSFTFVPGSLAY 422

Query: 421 QKGSPFEVQVARFPLQVPTYIF 430
            +GSPFEVQVARFPLQVPTYIF
Sbjct: 423 PEGSPFEVQVARFPLQVPTYIF 443

[Close]

BLAST of Cp4.1LG03g12360 vs. ExPASy TrEMBL
Match: A0A1S3AXG6 (F-box protein SKIP16 OS=Cucumis melo OX=3656 GN=LOC103483965 PE=4 SV=1)

HSP 1 Score: 734 bits (1896), Expect = 2.64e-265
Identity = 350/442 (79.19%), Postives = 394/442 (89.14%), Query Frame = 0


Query: 1   MDVEALGDLALHLIFAKLSPKDSAIAACVSRKFRSSASEDSLWEKFCHRDLGLTDPIDHL 60
           M++E + DL+LHL+FAKL PKDSAIAACVSR+FRSSASEDSLW+KFC++DL LTDP+DHL
Sbjct: 3   MELEGVDDLSLHLVFAKLGPKDSAIAACVSRQFRSSASEDSLWKKFCNQDLNLTDPVDHL 62

Query: 61  GNPVPSFKESYQEWRRAFGMYPWPLVERVKRCWDRIENWLRHNYPEALVTLREGASEADI 120
           GNP+PSFKE+YQ WRRAFGMYPWPL++RVKRCWDR++NWL  N+PEAL TLR GASEADI
Sbjct: 63  GNPIPSFKETYQVWRRAFGMYPWPLLKRVKRCWDRLKNWLSTNFPEALETLRNGASEADI 122

Query: 121 EDLENALKVKLPLPTRILYRFHNGQDLKGRYVDSVRGFPFGLIGGYTFYEQTVNVYLLPL 180
           E+ EN LKVKLPLPTRILYRFH+GQ+LKG YVDS+RGFP GLIGGYTFY QTVNVYLLPL
Sbjct: 123 EEFENVLKVKLPLPTRILYRFHDGQELKGGYVDSIRGFPLGLIGGYTFYGQTVNVYLLPL 182

Query: 181 RQVITETKSIIQELGFSRRSKFIVVASSSTLVHKVFFLNCASGQLFVGTANLREDGEMIP 240
           RQV++ETKSIIQ++ FSR+SKFIVVASSST   KVFFLNCASGQLFVGTA LR+DGEMIP
Sbjct: 183 RQVVSETKSIIQDVDFSRKSKFIVVASSSTFTEKVFFLNCASGQLFVGTAKLRDDGEMIP 242

Query: 241 CVPSALINSVHEYNTDQQQDAMLLWLEEHVRRLENGIIKLRETNNIRSISLFPEEPPFCS 300
           CVP ALI SVHE NT+ QQDAMLLWLEEHVRRLENGIIKLRE  NIRSISLFPEEPP CS
Sbjct: 243 CVPGALIKSVHECNTEHQQDAMLLWLEEHVRRLENGIIKLREIKNIRSISLFPEEPPLCS 302

Query: 301 VATTNGVRVRASAIFIPEFTDLLDSGGNYQFSYSIRMSLQPEGCIMNGMTFSSCQLHLRH 360
            A T+GV VRASA+F+PE TD+LDS GN+QF+YSIRMSLQ EGCI+NGMTF+SCQLHLRH
Sbjct: 303 TAITDGVCVRASAVFLPELTDILDSSGNHQFAYSIRMSLQDEGCIINGMTFNSCQLHLRH 362

Query: 361 WIIRANDYV------------YPLLQPGEKEFVYESCSSLHSSMGSIEGSFTFVPGSLTY 420
           W +RAND+V            +PLL+PGE EFVYESCSSL+SS+GS+EGSFTFVPGSL Y
Sbjct: 363 WKVRANDHVVSVVNGEAVIGKFPLLKPGE-EFVYESCSSLYSSVGSLEGSFTFVPGSLAY 422

Query: 421 QKGSPFEVQVARFPLQVPTYIF 430
            +GSPFEVQVARFPLQVPTYIF
Sbjct: 423 PEGSPFEVQVARFPLQVPTYIF 443

[Close]

BLAST of Cp4.1LG03g12360 vs. TAIR 10
Match: AT1G06110.1 (SKP1/ASK-interacting protein 16 )

HSP 1 Score: 511.9 bits (1317), Expect = 4.9e-145
Identity = 248/443 (55.98%), Postives = 325/443 (73.36%), Query Frame = 0


Query: 1   MDVEALGDLALHLIFAKLSPKDSAIAACVSRKFRSSASEDSLWEKFCHRDLGLTDPIDHL 60
           M +E  GDL LH++ +K+ P+++A  ACVS++ + SASE+SLW  FC  DL ++ P+D  
Sbjct: 1   MGLEDAGDLVLHIVLSKIGPENTARVACVSKRLKVSASEESLWSIFCSNDLNISTPLDPH 60

Query: 61  GNPVPSFKESYQEWRRAFGMYPWPLVERVKRCWDRIENWLRHNYPEALVTLREGASEADI 120
           G+P PSFK +YQ WR +F MYPW LV+RV+ CWD ++ WL  N+PEA  TLR+G +E D+
Sbjct: 61  GDPAPSFKRAYQLWRESFRMYPWNLVKRVRLCWDNLKQWLTLNFPEAKATLRKGVTEDDL 120

Query: 121 EDLENALKVKLPLPTRILYRFHNGQDLKGRYVDSVRGFPFGLIGGYTFYEQTVNVYLLPL 180
           ++ E +LKVKLPLPTR+LYRF +GQ+L     + + G   GLIGGY+ Y   VNVYLLPL
Sbjct: 121 QEFETSLKVKLPLPTRLLYRFVDGQELSS--PNGLDG-SLGLIGGYSAYSHDVNVYLLPL 180

Query: 181 RQVITETK-SIIQELGFSRRSKFIVVASSSTLVHKVFFLNCASGQLFVGTANLREDGEMI 240
           ++V+ ETK S +++LGFS R   IV+A+S     K+F L+C +GQLF GT+N     +++
Sbjct: 181 KEVMRETKESFMRDLGFSSRLDLIVMAASVVASLKIFLLDCTTGQLFTGTSN----RQLL 240

Query: 241 PCVPSALINSVHEYNTDQQQDAMLLWLEEHVRRLENGIIKLRETNNIRSISLFPEEPPFC 300
           PCVP AL+ SVH+ N DQQQDAMLLWLEEH RRL+ G I +R+ NN++SISLFPE PP C
Sbjct: 241 PCVPDALVRSVHDTNGDQQQDAMLLWLEEHGRRLQTGTINVRQQNNVKSISLFPEIPPLC 300

Query: 301 SVATTNGVRVRASAIFIPEFTDLLDSGGNYQFSYSIRMSLQPEGCIMNGMTFSSCQLHLR 360
           SV+ TNGV+VRAS++FIPE ++L D    Y ++YSIRMSL PEGCI+NG   SSCQL+ R
Sbjct: 301 SVSVTNGVQVRASSVFIPEISNLRDQPPAYWYAYSIRMSLMPEGCILNGTHHSSCQLYWR 360

Query: 361 HWIIRANDYV------------YPLLQPGEKEFVYESCSSLHSSMGSIEGSFTFVPGSLT 420
           HW+IRA++ V            YPLLQ GE+EFVYESCSS  ++ GSI+GSFTFVPGSL 
Sbjct: 361 HWVIRADNEVIDNVNGEAVIGKYPLLQAGEEEFVYESCSSFPTTAGSIDGSFTFVPGSLR 420

Query: 421 YQKGSPFEVQVARFPLQVPTYIF 431
             KGS FEV+V  FPL++P YIF
Sbjct: 421 DPKGSQFEVKVVEFPLELPDYIF 436

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g12360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LND7	6.9e-144	55.98	F-box protein SKIP16 OS=Arabidopsis thaliana OX=3702 GN=SKIP16 PE=1 SV=1	[more]
Q9UK99	1.1e-21	23.76	F-box only protein 3 OS=Homo sapiens OX=9606 GN=FBXO3 PE=1 SV=3	[more]
A6H7H7	3.3e-21	23.76	F-box only protein 3 OS=Bos taurus OX=9913 GN=FBXO3 PE=2 SV=1	[more]
D4ABP9	7.4e-21	23.76	F-box only protein 3 OS=Rattus norvegicus OX=10116 GN=Fbxo3 PE=3 SV=1	[more]
Q9DC63	1.1e-19	23.70	F-box only protein 3 OS=Mus musculus OX=10090 GN=Fbxo3 PE=1 SV=1	[more]

BLAST of Cp4.1LG03g12360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023528493.1	0.0	97.29	F-box protein SKIP16 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022956186.1	1.74e-315	95.70	F-box protein SKIP16 [Cucurbita moschata]	[more]
XP_022979795.1	5.32e-313	94.57	F-box protein SKIP16 [Cucurbita maxima]	[more]
KAG6582096.1	3.62e-298	95.92	F-box protein SKIP16, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023528494.1	1.18e-278	96.65	F-box protein SKIP16 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG03g12360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GVV6	8.41e-316	95.70	F-box protein SKIP16 OS=Cucurbita moschata OX=3662 GN=LOC111457956 PE=4 SV=1	[more]
A0A6J1IUC9	2.57e-313	94.57	F-box protein SKIP16 OS=Cucurbita maxima OX=3661 GN=LOC111479390 PE=4 SV=1	[more]
A0A0A0L8A4	3.82e-269	80.54	ApaG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G174030 PE=4 S...	[more]
A0A5D3DJ52	2.64e-265	79.19	F-box protein SKIP16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577...	[more]
A0A1S3AXG6	2.64e-265	79.19	F-box protein SKIP16 OS=Cucumis melo OX=3656 GN=LOC103483965 PE=4 SV=1	[more]

BLAST of Cp4.1LG03g12360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G06110.1	4.9e-145	55.98	SKP1/ASK-interacting protein 16	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 6..46 e-value: 9.4E-4 score: 28.5
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 10..47 e-value: 1.8E-5 score: 24.5
IPR037883	Knr4/Smi1-like domain superfamily	GENE3D	3.40.1580.10		coord: 96..229 e-value: 1.2E-5 score: 27.0
IPR037883	Knr4/Smi1-like domain superfamily	SUPERFAMILY	160631	SMI1/KNR4-like	coord: 92..198
None	No IPR available	GENE3D	1.20.1280.50		coord: 3..95 e-value: 9.3E-8 score: 33.9
None	No IPR available	PANTHER	PTHR47463	F-BOX PROTEIN SKIP16	coord: 1..430
IPR036767	ApaG domain superfamily	GENE3D	2.60.40.1470	ApaG domain	coord: 299..429 e-value: 4.9E-26 score: 93.1
IPR036767	ApaG domain superfamily	SUPERFAMILY	110069	ApaG-like	coord: 303..430
IPR007474	ApaG domain	PFAM	PF04379	DUF525	coord: 327..402 e-value: 6.7E-12 score: 45.5
IPR007474	ApaG domain	PROSITE	PS51087	APAG	coord: 301..430 score: 17.019571
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 8..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g12360.1	Cp4.1LG03g12360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0019005	SCF ubiquitin ligase complex
molecular_function	GO:0005515	protein binding