Cp4.1LG03g11950 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG03g11950
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	transcription factor MYB78-like
Location	Cp4.1LG03: 10708675 .. 10709879 (+)
RNA-Seq Expression	Cp4.1LG03g11950
Synteny	Cp4.1LG03g11950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCGTAGCGCTTCTTTCTCCTCTCTCTCTCTCTCTCTCTCTAAAAATCTCCGTCCAAAATTATATCGAACTTGCCGCCGGCATCCGGAAAATGGACGGAAATAAAGAGCGACGGTTTGATAACGGCAACTTACACGGCGGCGACGACGACGGCGACCTGAGACGAGGACCGTGGACGGTGGAGGAGGACATGACTCTCATCAATTACATCGCGAATCACGGCGACGGCCGCTGGAATTCACTCGCTCGTTGCGCCGGTAACGGATTCCTCGCCGGAACCCTAACTTATTCCGATTCCTCTGTTTCTGAATTTATCGTTCGCGCATTTTTTTTTTTTTTATTGATGTTGAAATTGGAAAATTGATTCACAGGCCTGAAGCGTACCGGAAAAAGCTGCCGATTGCGGTGGCTGAACTATCTCCGGCCGGACGTCCGGCGAGGAAATATTACACTCGAAGAACAGCTCCTGATTCTGGAACTTCATTGCCGTTGGGGAAATCGGTACGGATGTTGATTTTATTGATTTAAATTGTAAAATGTGTGAATAATTTTTAAATTTTTATATAATTTTTTTAATTTTCAGATGGTCGAAGATTGCCCAGCAATTACCTGGACGAACCGATAACGAAATAAAGAACTATTGGAGGACTCGAGTTCAGAAGCACGCAAAGCAGCTCAAATGCGACGTTAACAGTAAACAATTCAAGGATACCATGCGATATCTCTGGATGCCGCGTCTCGTCGAACGGATTCAGGCCGCCGCCGCGGCATCCACCGCCGTCGACGGAAACCGATCGTACGGATCAGTGGCTCGGCCGGCTTCGGCGGCTGTGATGAACAGCGGTAGTGATTTTGTCAGTACTCCACAAGTCACCCCGAGTTATACGTCGGAGAATTCCAGCTCTGGCGGAGGTGGAGGCGGCTCCTCCATGTCTGATTTGACGGATTGCTACAACAATTTCAGTTGTTTTCCGGTGGTTCCGCCGCCGTTGCAGAGTCCGGCTCCTGGATTCTTCAACGATGAGACATTGGATTTTCAGGCGATGGAGCAGAGTAGTTGCCAGTGGATGGCGGCGGACGGTGGCGTTGACACGTCGGAGAGCTTGTGGAATGCCGCCGACGCCGGTGCCGATTACTTCTGGTTCTCGCAGCAGCAGTTGAATTAACAAAAGGAGAAACTATACATAATTTGTAGAGCGGAATAT

mRNA sequence

CTCCGTAGCGCTTCTTTCTCCTCTCTCTCTCTCTCTCTCTCTAAAAATCTCCGTCCAAAATTATATCGAACTTGCCGCCGGCATCCGGAAAATGGACGGAAATAAAGAGCGACGGTTTGATAACGGCAACTTACACGGCGGCGACGACGACGGCGACCTGAGACGAGGACCGTGGACGGTGGAGGAGGACATGACTCTCATCAATTACATCGCGAATCACGGCGACGGCCGCTGGAATTCACTCGCTCGTTGCGCCGGCCTGAAGCGTACCGGAAAAAGCTGCCGATTGCGGTGGCTGAACTATCTCCGGCCGGACGTCCGGCGAGGAAATATTACACTCGAAGAACAGCTCCTGATTCTGGAACTTCATTGCCGTTGGGGAAATCGATGGTCGAAGATTGCCCAGCAATTACCTGGACGAACCGATAACGAAATAAAGAACTATTGGAGGACTCGAGTTCAGAAGCACGCAAAGCAGCTCAAATGCGACGTTAACAGTAAACAATTCAAGGATACCATGCGATATCTCTGGATGCCGCGTCTCGTCGAACGGATTCAGGCCGCCGCCGCGGCATCCACCGCCGTCGACGGAAACCGATCGTACGGATCAGTGGCTCGGCCGGCTTCGGCGGCTGTGATGAACAGCGGTAGTGATTTTGTCAGTACTCCACAAGTCACCCCGAGTTATACGTCGGAGAATTCCAGCTCTGGCGGAGGTGGAGGCGGCTCCTCCATGTCTGATTTGACGGATTGCTACAACAATTTCAGTTGTTTTCCGGTGGTTCCGCCGCCGTTGCAGAGTCCGGCTCCTGGATTCTTCAACGATGAGACATTGGATTTTCAGGCGATGGAGCAGAGTAGTTGCCAGTGGATGGCGGCGGACGGTGGCGTTGACACGTCGGAGAGCTTGTGGAATGCCGCCGACGCCGGTGCCGATTACTTCTGGTTCTCGCAGCAGCAGTTGAATTAACAAAAGGAGAAACTATACATAATTTGTAGAGCGGAATAT

Coding sequence (CDS)

ATGGACGGAAATAAAGAGCGACGGTTTGATAACGGCAACTTACACGGCGGCGACGACGACGGCGACCTGAGACGAGGACCGTGGACGGTGGAGGAGGACATGACTCTCATCAATTACATCGCGAATCACGGCGACGGCCGCTGGAATTCACTCGCTCGTTGCGCCGGCCTGAAGCGTACCGGAAAAAGCTGCCGATTGCGGTGGCTGAACTATCTCCGGCCGGACGTCCGGCGAGGAAATATTACACTCGAAGAACAGCTCCTGATTCTGGAACTTCATTGCCGTTGGGGAAATCGATGGTCGAAGATTGCCCAGCAATTACCTGGACGAACCGATAACGAAATAAAGAACTATTGGAGGACTCGAGTTCAGAAGCACGCAAAGCAGCTCAAATGCGACGTTAACAGTAAACAATTCAAGGATACCATGCGATATCTCTGGATGCCGCGTCTCGTCGAACGGATTCAGGCCGCCGCCGCGGCATCCACCGCCGTCGACGGAAACCGATCGTACGGATCAGTGGCTCGGCCGGCTTCGGCGGCTGTGATGAACAGCGGTAGTGATTTTGTCAGTACTCCACAAGTCACCCCGAGTTATACGTCGGAGAATTCCAGCTCTGGCGGAGGTGGAGGCGGCTCCTCCATGTCTGATTTGACGGATTGCTACAACAATTTCAGTTGTTTTCCGGTGGTTCCGCCGCCGTTGCAGAGTCCGGCTCCTGGATTCTTCAACGATGAGACATTGGATTTTCAGGCGATGGAGCAGAGTAGTTGCCAGTGGATGGCGGCGGACGGTGGCGTTGACACGTCGGAGAGCTTGTGGAATGCCGCCGACGCCGGTGCCGATTACTTCTGGTTCTCGCAGCAGCAGTTGAATTAA

Protein sequence

MDGNKERRFDNGNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAAASTAVDGNRSYGSVARPASAAVMNSGSDFVSTPQVTPSYTSENSSSGGGGGGSSMSDLTDCYNNFSCFPVVPPPLQSPAPGFFNDETLDFQAMEQSSCQWMAADGGVDTSESLWNAADAGADYFWFSQQQLN

Homology

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BLAST of Cp4.1LG03g11950 vs. ExPASy Swiss-Prot
Match: Q9FGY3 (Transcription factor MYB78 OS=Arabidopsis thaliana OX=3702 GN=MYB78 PE=1 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 7.2e-76
Identity = 159/285 (55.79%), Postives = 190/285 (66.67%), Query Frame = 0


Query: 18  DDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVR 77
           +++ D+RRGPWTVEED+ LINYIA+HG+GRWNSLARCA LKRTGKSCRLRWLNYLRPDVR
Sbjct: 21  EEEMDVRRGPWTVEEDLELINYIASHGEGRWNSLARCAELKRTGKSCRLRWLNYLRPDVR 80

Query: 78  RGNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSK 137
           RGNITLEEQLLILELH RWGNRWSKIAQ LPGRTDNEIKNYWRTRVQKHAKQLKCDVNS+
Sbjct: 81  RGNITLEEQLLILELHTRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSQ 140

Query: 138 QFKDTMRYLWMPRLVERIQAAAAASTAVDGNRSYGSVARPASAAVMNSGSDFVSTPQVTP 197
           QFKDTM+YLWMPRLVERIQAA+  S ++    +  S     +    N+  +         
Sbjct: 141 QFKDTMKYLWMPRLVERIQAASIGSVSMSSCVTTSSDQFVINNNNTNNVDNLALMSNPNG 200

Query: 198 SYTSENSSSGGGGGGSSMSDLTDCYNNFSCFPV------VPPPLQSP-----APGFFNDE 257
             T +NSS       S +SDLT+C  +   + +      V P + SP     + G  N +
Sbjct: 201 YITPDNSSV----AVSPVSDLTECQVSSEVWKIGQDENLVDPKMTSPNYMDNSSGLLNGD 260

Query: 258 TLDFQAMEQSSCQWMAADGGV--DTSESLWNAADAGADYFWFSQQ 290
               Q  +QS   W     G+  + S+S WN  +   + FW  QQ
Sbjct: 261 FTKMQ--DQSDLNWFENINGMVPNYSDSFWNIGN--DEDFWLLQQ 297

[Close]

BLAST of Cp4.1LG03g11950 vs. ExPASy Swiss-Prot
Match: Q9LDE1 (Transcription factor MYB108 OS=Arabidopsis thaliana OX=3702 GN=MYB108 PE=1 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 1.2e-75
Identity = 172/324 (53.09%), Postives = 200/324 (61.73%), Query Frame = 0


Query: 5   KERRFDNGNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRTGKSC 64
           K R   N N+   +D+ DL+RGPWT EED  L+NYIA +G+GRWNSL+RCAGL+RTGKSC
Sbjct: 4   KGRSLKNNNM---EDEMDLKRGPWTAEEDFKLMNYIATNGEGRWNSLSRCAGLQRTGKSC 63

Query: 65  RLRWLNYLRPDVRRGNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYWRTRVQ 124
           RLRWLNYLRPDVRRGNITLEEQLLILELH RWGNRWSKIAQ LPGRTDNEIKNYWRTRVQ
Sbjct: 64  RLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQ 123

Query: 125 KHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAAAS--------TAVDGNRSYGSVAR 184
           KHAKQLKCDVNS+QFKDTM+YLWMPRLVERIQ+A+A+S        T   G+    S   
Sbjct: 124 KHAKQLKCDVNSQQFKDTMKYLWMPRLVERIQSASASSAAAATTTTTTTTGSAGTSSCIT 183

Query: 185 PASAAVM-------NSGSDFVSTPQVTPSYTSENSSSGGGGGGSSMSDLTDCYNNFSCFP 244
            ++   M       N G  F          T ENSS       S  SDLT+ Y+     P
Sbjct: 184 TSNNQFMNYDYNNNNMGQQF-GVMSNNDYITPENSSV----AVSPASDLTEYYS----AP 243

Query: 245 VVPPPLQSPAPG--FFNDETL-------------------DFQAM-EQSSCQWMA-ADGG 291
              P   S   G  ++ D+ L                   D  AM EQS+  W    +G 
Sbjct: 244 NPNPEYYSGQMGNSYYPDQNLVSSQLLPDNYFDYSGLLDEDLTAMQEQSNLSWFENINGA 303

[Close]

BLAST of Cp4.1LG03g11950 vs. ExPASy Swiss-Prot
Match: Q10MB4 (Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 7.4e-73
Identity = 127/140 (90.71%), Postives = 133/140 (95.00%), Query Frame = 0


Query: 21  GDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVRRGN 80
           GDLRRGPWTVEED+ L+NYIA HG+GRWNSLAR AGLKRTGKSCRLRWLNYLRPD+RRGN
Sbjct: 18  GDLRRGPWTVEEDLLLVNYIAAHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRPDLRRGN 77

Query: 81  ITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFK 140
           IT +EQLLILELH RWGNRWSKIAQ LPGRTDNEIKNYWRTRVQKHAKQLKCDVNS+QFK
Sbjct: 78  ITPQEQLLILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSQQFK 137

Query: 141 DTMRYLWMPRLVERIQAAAA 161
           D MRYLWMPRLVERIQAAAA
Sbjct: 138 DVMRYLWMPRLVERIQAAAA 157

[Close]

BLAST of Cp4.1LG03g11950 vs. ExPASy Swiss-Prot
Match: Q2QZJ8 (Transcription factor JAMYB OS=Oryza sativa subsp. japonica OX=39947 GN=JAMYB PE=2 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.3e-69
Identity = 130/186 (69.89%), Postives = 147/186 (79.03%), Query Frame = 0


Query: 22  DLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVRRGNI 81
           +LRRGPWTV+ED+TLINYI++HG+GRWN+LAR AGLKRTGKSCRLRWLNYLRPDV+RGN 
Sbjct: 28  ELRRGPWTVDEDLTLINYISDHGEGRWNALARAAGLKRTGKSCRLRWLNYLRPDVKRGNF 87

Query: 82  TLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKD 141
           T EEQLLIL+LH RWGNRWSKIAQ LPGRTDNEIKNYWRTRVQKHAKQL CDVNSK+FKD
Sbjct: 88  TAEEQLLILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKQLNCDVNSKRFKD 147

Query: 142 TMRYLWMPRLVERIQAAAAA--STAVDGNRSYGSVARPASAAVMN--SGSDFVSTPQVTP 201
            M+YLWMPRL ERI A A A   +    N     V+    A V N   GS  + T   + 
Sbjct: 148 AMKYLWMPRLAERIHARAGAVDDSGDYSNNDLSCVSGVTMATVANCFDGSPSMVTSSSSD 207

Query: 202 SYTSEN 204
           S+TSE+
Sbjct: 208 SFTSES 213

[Close]

BLAST of Cp4.1LG03g11950 vs. ExPASy Swiss-Prot
Match: Q9C9G7 (Transcription factor MYB62 OS=Arabidopsis thaliana OX=3702 GN=MYB62 PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.2e-56
Identity = 111/203 (54.68%), Postives = 145/203 (71.43%), Query Frame = 0


Query: 19  DDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVRR 78
           +D +LRRGPWT+EED  L NYI ++G+GRWN +A+CAGLKRTGKSCRLRWLNYL+PD+RR
Sbjct: 15  EDEELRRGPWTLEEDTLLTNYILHNGEGRWNHVAKCAGLKRTGKSCRLRWLNYLKPDIRR 74

Query: 79  GNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQ 138
           GN+T +EQLLILELH +WGNRWSKIAQ LPGRTDNEIKNYWRTRVQK A+QL  + NS +
Sbjct: 75  GNLTPQEQLLILELHSKWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQARQLNIESNSDK 134

Query: 139 FKDTMRYLWMPRLVERIQAAAAAST--AVDGNRSYGSVARPASAAVMNSGSDFVSTPQVT 198
           F D +R  W+PRL+E+++  ++ +T      N +  S+  P+ +       D +S  Q  
Sbjct: 135 FFDAVRSFWVPRLIEKMEQNSSTTTTYCCPQNNNNNSLLLPSQS------HDSLSM-QKD 194

Query: 199 PSYTSENSSSGGGGGGSSMSDLT 220
             Y+  ++  G     + MS LT
Sbjct: 195 IDYSGFSNIDGSSSTSTCMSHLT 210

[Close]

BLAST of Cp4.1LG03g11950 vs. NCBI nr
Match: XP_023527593.1 (transcription factor MYB78-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 602 bits (1551), Expect = 2.85e-217
Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 0


Query: 1   MDGNKERRFDNGNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRT 60
           MDGNKERRFDNGNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRT
Sbjct: 1   MDGNKERRFDNGNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRT 60

Query: 61  GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYWR 120
           GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYWR
Sbjct: 61  GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYWR 120

Query: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAAASTAVDGNRSYGSVARPASA 180
           TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAAASTAVDGNRSYGSVARPASA
Sbjct: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAAASTAVDGNRSYGSVARPASA 180

Query: 181 AVMNSGSDFVSTPQVTPSYTSENSSSGGGGGGSSMSDLTDCYNNFSCFPVVPPPLQSPAP 240
           AVMNSGSDFVSTPQVTPSYTSENSSSGGGGGGSSMSDLTDCYNNFSCFPVVPPPLQSPAP
Sbjct: 181 AVMNSGSDFVSTPQVTPSYTSENSSSGGGGGGSSMSDLTDCYNNFSCFPVVPPPLQSPAP 240

Query: 241 GFFNDETLDFQAMEQSSCQWMAADGGVDTSESLWNAADAGADYFWFSQQQLN 292
           GFFNDETLDFQAMEQSSCQWMAADGGVDTSESLWNAADAGADYFWFSQQQLN
Sbjct: 241 GFFNDETLDFQAMEQSSCQWMAADGGVDTSESLWNAADAGADYFWFSQQQLN 292

[Close]

BLAST of Cp4.1LG03g11950 vs. NCBI nr
Match: XP_022955976.1 (transcription factor MYB78-like [Cucurbita moschata])

HSP 1 Score: 590 bits (1520), Expect = 1.41e-212
Identity = 287/292 (98.29%), Postives = 288/292 (98.63%), Query Frame = 0


Query: 1   MDGNKERRFDNGNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRT 60
           MDGNKERRFDNGNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRT
Sbjct: 1   MDGNKERRFDNGNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRT 60

Query: 61  GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYWR 120
           GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYWR
Sbjct: 61  GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYWR 120

Query: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAAASTAVDGNRSYGSVARPASA 180
           TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQ AA  STAVDGNRSYGSVARPASA
Sbjct: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQVAA--STAVDGNRSYGSVARPASA 180

Query: 181 AVMNSGSDFVSTPQVTPSYTSENSSSGGGGGGSSMSDLTDCYNNFSCFPVVPPPLQSPAP 240
           AVMNSGSDFVSTPQVTPSYTSENSSSGGGGGGSSMSDLTDCYNNFSCFPVVPPPLQSPAP
Sbjct: 181 AVMNSGSDFVSTPQVTPSYTSENSSSGGGGGGSSMSDLTDCYNNFSCFPVVPPPLQSPAP 240

Query: 241 GFFNDETLDFQAMEQSSCQWMAADGGVDTSESLWNAADAGADYFWFSQQQLN 292
           GFFN+ETLDFQAMEQSSCQWMAADGGVDTSESLWN ADAGADYFWFSQQQLN
Sbjct: 241 GFFNEETLDFQAMEQSSCQWMAADGGVDTSESLWNTADAGADYFWFSQQQLN 290

[Close]

BLAST of Cp4.1LG03g11950 vs. NCBI nr
Match: KAG6582156.1 (Transcription factor MYB2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 588 bits (1517), Expect = 4.04e-212
Identity = 287/292 (98.29%), Postives = 289/292 (98.97%), Query Frame = 0


Query: 1   MDGNKERRFDNGNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRT 60
           MDGNKERRFD+GNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRT
Sbjct: 1   MDGNKERRFDSGNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRT 60

Query: 61  GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYWR 120
           GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYWR
Sbjct: 61  GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYWR 120

Query: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAAASTAVDGNRSYGSVARPASA 180
           TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAA  STAVDGNRSYGSVARPASA
Sbjct: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAA--STAVDGNRSYGSVARPASA 180

Query: 181 AVMNSGSDFVSTPQVTPSYTSENSSSGGGGGGSSMSDLTDCYNNFSCFPVVPPPLQSPAP 240
           AVMNSGSDFVSTPQVTPSYTSENSSSGGGGGGSSMSDLTDCYNNFSCFPVVPPPLQSPAP
Sbjct: 181 AVMNSGSDFVSTPQVTPSYTSENSSSGGGGGGSSMSDLTDCYNNFSCFPVVPPPLQSPAP 240

Query: 241 GFFNDETLDFQAMEQSSCQWMAADGGVDTSESLWNAADAGADYFWFSQQQLN 292
           GFFN+ETLDFQAMEQSSCQWMAADGGVDT ESLWNAADAGADYFWFSQQQLN
Sbjct: 241 GFFNEETLDFQAMEQSSCQWMAADGGVDTLESLWNAADAGADYFWFSQQQLN 290

[Close]

BLAST of Cp4.1LG03g11950 vs. NCBI nr
Match: XP_022979886.1 (transcription factor MYB78-like [Cucurbita maxima])

HSP 1 Score: 568 bits (1465), Expect = 4.78e-204
Identity = 281/299 (93.98%), Postives = 285/299 (95.32%), Query Frame = 0


Query: 1   MDGNKERRFDNGNLHGG-DDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKR 60
           MDGNKERRFDN NLHGG DDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKR
Sbjct: 1   MDGNKERRFDNVNLHGGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKR 60

Query: 61  TGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYW 120
           TGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYW
Sbjct: 61  TGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYW 120

Query: 121 RTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAAASTAVDGNRSYGSVARPAS 180
           RTRVQKHAKQLKCDVNSKQFKDT+RYLWMPRLVERIQ AAAASTAVDGNRSY SVARPAS
Sbjct: 121 RTRVQKHAKQLKCDVNSKQFKDTLRYLWMPRLVERIQVAAAASTAVDGNRSYESVARPAS 180

Query: 181 AAVMNSGSDFVSTPQVTPSYTSENSSSGGGGGGSSMSDLTDCYNNFSCFPV------VPP 240
           AA+MNSG DFVSTPQVTPSYTSENSSSGGGGGGS+MSDLTDCYNNFSCFPV       PP
Sbjct: 181 AAMMNSGYDFVSTPQVTPSYTSENSSSGGGGGGSTMSDLTDCYNNFSCFPVGYGQEVAPP 240

Query: 241 PLQSPAPGFFNDETLDFQAMEQSSCQWMAADGGVDTSESLWNAADAGADYFWFSQQQLN 292
           PLQS APGFFN+ETLDFQAMEQSSCQWMAADGGVDTSESLWNA DAGADYFWFSQQQLN
Sbjct: 241 PLQSQAPGFFNEETLDFQAMEQSSCQWMAADGGVDTSESLWNAPDAGADYFWFSQQQLN 299

[Close]

BLAST of Cp4.1LG03g11950 vs. NCBI nr
Match: XP_038901988.1 (MYB-like transcription factor EOBI [Benincasa hispida])

HSP 1 Score: 538 bits (1385), Expect = 7.18e-192
Identity = 266/299 (88.96%), Postives = 274/299 (91.64%), Query Frame = 0


Query: 1   MDGNKERRFDNGNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRT 60
           MDGNKERRFD+G LHGGDDDGDLRRGPWTVEED+TLINYIANHGDGRWNSLARCAGLKRT
Sbjct: 1   MDGNKERRFDSGTLHGGDDDGDLRRGPWTVEEDITLINYIANHGDGRWNSLARCAGLKRT 60

Query: 61  GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYWR 120
           GKSCRLRWLNYLRPDVRRGNITLEEQLLILELH RWGNRWSKIAQQLPGRTDNEIKNYWR
Sbjct: 61  GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWR 120

Query: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAAASTAVDGNRSYGSVARPASA 180
           TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAA +S AVDGNRSY SV     A
Sbjct: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAVSSAAVDGNRSYESVTPTPPA 180

Query: 181 AVMNSGSDFVSTPQVTPSYTSENSSSGGGGGGSSMSDLTDCYNNFSCFPV-------VPP 240
            +MN GSDFVSTPQVTPSYTSENSSSGGGGG SS+S+LTDCYNNFSCFPV         P
Sbjct: 181 VMMNGGSDFVSTPQVTPSYTSENSSSGGGGG-SSVSELTDCYNNFSCFPVGYGQEAAEQP 240

Query: 241 PLQSPAPGFFNDETLDFQAMEQSSCQWMAADGGVDTSESLWNAADAGADYFWFSQQQLN 292
           PLQSPAPGFFN+ETLDFQ MEQS+CQWMAADGGVDTSESLWNAA AGADYFWF QQQLN
Sbjct: 241 PLQSPAPGFFNEETLDFQGMEQSTCQWMAADGGVDTSESLWNAAGAGADYFWFLQQQLN 298

[Close]

BLAST of Cp4.1LG03g11950 vs. ExPASy TrEMBL
Match: A0A6J1GVA9 (transcription factor MYB78-like OS=Cucurbita moschata OX=3662 GN=LOC111457810 PE=4 SV=1)

HSP 1 Score: 590 bits (1520), Expect = 6.83e-213
Identity = 287/292 (98.29%), Postives = 288/292 (98.63%), Query Frame = 0


Query: 1   MDGNKERRFDNGNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRT 60
           MDGNKERRFDNGNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRT
Sbjct: 1   MDGNKERRFDNGNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRT 60

Query: 61  GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYWR 120
           GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYWR
Sbjct: 61  GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYWR 120

Query: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAAASTAVDGNRSYGSVARPASA 180
           TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQ AA  STAVDGNRSYGSVARPASA
Sbjct: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQVAA--STAVDGNRSYGSVARPASA 180

Query: 181 AVMNSGSDFVSTPQVTPSYTSENSSSGGGGGGSSMSDLTDCYNNFSCFPVVPPPLQSPAP 240
           AVMNSGSDFVSTPQVTPSYTSENSSSGGGGGGSSMSDLTDCYNNFSCFPVVPPPLQSPAP
Sbjct: 181 AVMNSGSDFVSTPQVTPSYTSENSSSGGGGGGSSMSDLTDCYNNFSCFPVVPPPLQSPAP 240

Query: 241 GFFNDETLDFQAMEQSSCQWMAADGGVDTSESLWNAADAGADYFWFSQQQLN 292
           GFFN+ETLDFQAMEQSSCQWMAADGGVDTSESLWN ADAGADYFWFSQQQLN
Sbjct: 241 GFFNEETLDFQAMEQSSCQWMAADGGVDTSESLWNTADAGADYFWFSQQQLN 290

[Close]

BLAST of Cp4.1LG03g11950 vs. ExPASy TrEMBL
Match: A0A6J1IS14 (transcription factor MYB78-like OS=Cucurbita maxima OX=3661 GN=LOC111479442 PE=4 SV=1)

HSP 1 Score: 568 bits (1465), Expect = 2.31e-204
Identity = 281/299 (93.98%), Postives = 285/299 (95.32%), Query Frame = 0


Query: 1   MDGNKERRFDNGNLHGG-DDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKR 60
           MDGNKERRFDN NLHGG DDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKR
Sbjct: 1   MDGNKERRFDNVNLHGGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKR 60

Query: 61  TGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYW 120
           TGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYW
Sbjct: 61  TGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYW 120

Query: 121 RTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAAASTAVDGNRSYGSVARPAS 180
           RTRVQKHAKQLKCDVNSKQFKDT+RYLWMPRLVERIQ AAAASTAVDGNRSY SVARPAS
Sbjct: 121 RTRVQKHAKQLKCDVNSKQFKDTLRYLWMPRLVERIQVAAAASTAVDGNRSYESVARPAS 180

Query: 181 AAVMNSGSDFVSTPQVTPSYTSENSSSGGGGGGSSMSDLTDCYNNFSCFPV------VPP 240
           AA+MNSG DFVSTPQVTPSYTSENSSSGGGGGGS+MSDLTDCYNNFSCFPV       PP
Sbjct: 181 AAMMNSGYDFVSTPQVTPSYTSENSSSGGGGGGSTMSDLTDCYNNFSCFPVGYGQEVAPP 240

Query: 241 PLQSPAPGFFNDETLDFQAMEQSSCQWMAADGGVDTSESLWNAADAGADYFWFSQQQLN 292
           PLQS APGFFN+ETLDFQAMEQSSCQWMAADGGVDTSESLWNA DAGADYFWFSQQQLN
Sbjct: 241 PLQSQAPGFFNEETLDFQAMEQSSCQWMAADGGVDTSESLWNAPDAGADYFWFSQQQLN 299

[Close]

BLAST of Cp4.1LG03g11950 vs. ExPASy TrEMBL
Match: A0A0A0L5Y4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G168940 PE=4 SV=1)

HSP 1 Score: 503 bits (1295), Expect = 2.32e-178
Identity = 252/305 (82.62%), Postives = 263/305 (86.23%), Query Frame = 0


Query: 1   MDGNKERRFDNGNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRT 60
           MDGNK+R FD+G LHGG+DD DLRRGPWTVEED+ LINYI NHGDGRWNSLARCAGLKRT
Sbjct: 1   MDGNKDRMFDSGTLHGGEDDADLRRGPWTVEEDIILINYIHNHGDGRWNSLARCAGLKRT 60

Query: 61  GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYWR 120
           GKSCRLRWLNYLRPDVRRGNITLEEQLLILELH RWGNRWSKIAQQLPGRTDNEIKNYWR
Sbjct: 61  GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWR 120

Query: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAAASTAVDGNRSYGSVARPASA 180
           TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAA+ ASTAVDG+RSYGSV     A
Sbjct: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAASVASTAVDGSRSYGSVTPTQPA 180

Query: 181 AVMNSGSDFVSTPQVTPSYTSENSSSGGGGGGS------SMSDLTDCYNNFSCFP----- 240
            +MN GSDFVSTPQVTPSYTSENSSSGGGGG S      SMS+LTDCYNNFSCFP     
Sbjct: 181 LMMNGGSDFVSTPQVTPSYTSENSSSGGGGGSSDGTQVSSMSELTDCYNNFSCFPSGYGQ 240

Query: 241 --VVPPPLQSPAPGFFNDETLDFQAMEQSSCQWMAADGGVDTSESLWNAADAGADYFWFS 292
                  LQSPA GFFN+ TLDFQAMEQSSC+WMA DGGV TSESLW+ A  GADY WF 
Sbjct: 241 DAAAAAALQSPAGGFFNEGTLDFQAMEQSSCEWMAGDGGVVTSESLWSGAGDGADYLWFL 300

[Close]

BLAST of Cp4.1LG03g11950 vs. ExPASy TrEMBL
Match: A0A1S3AXP8 (transcription factor MYB108 OS=Cucumis melo OX=3656 GN=LOC103483906 PE=4 SV=1)

HSP 1 Score: 486 bits (1250), Expect = 1.99e-171
Identity = 252/312 (80.77%), Postives = 264/312 (84.62%), Query Frame = 0


Query: 1   MDGNKERRFDNGNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRT 60
           MDGNK+R FD+G LHGG+DD DLRRGPWTVEED+ LINYIANHGDGRWNSLARCAGLKRT
Sbjct: 1   MDGNKDRMFDSGTLHGGEDDSDLRRGPWTVEEDIILINYIANHGDGRWNSLARCAGLKRT 60

Query: 61  GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYWR 120
           GKSCRLRWLNYLRPDVRRGNITLEEQLLILELH RWGNRWSKIAQQLPGRTDNEIKNYWR
Sbjct: 61  GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWR 120

Query: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAA----AASTAVDGNRSYGSVAR 180
           TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAA    AAS  VDG+ SYGSV  
Sbjct: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAVSSVAASAVVDGSGSYGSVTP 180

Query: 181 PASAAVMNSGSDFVSTPQVTPSYTSENSSSGGGGGGS------SMSDLTDCYNNFSC-FP 240
              A +MN GSDFVSTPQVTPSYTSENSSSGGGGG S      S+S+LTDCYNNFSC FP
Sbjct: 181 TPPALMMNGGSDFVSTPQVTPSYTSENSSSGGGGGSSDGTQVSSVSELTDCYNNFSCNFP 240

Query: 241 VV--------PPPLQSPAPG-FFNDETLDFQAMEQSSCQWMAADGGVDTSESLWNAADAG 292
                        +QSPA G FFN+ TLDFQAM+QSSC+WMA DGGVDTSESLWN A  G
Sbjct: 241 AGYEQDAGAGAASMQSPAGGLFFNEGTLDFQAMQQSSCEWMAGDGGVDTSESLWNGA--G 300

[Close]

BLAST of Cp4.1LG03g11950 vs. ExPASy TrEMBL
Match: A0A6J1I7V3 (transcription factor MYB78-like OS=Cucurbita maxima OX=3661 GN=LOC111470802 PE=4 SV=1)

HSP 1 Score: 485 bits (1249), Expect = 2.19e-171
Identity = 241/307 (78.50%), Postives = 259/307 (84.36%), Query Frame = 0


Query: 1   MDGNKERRFDNGNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRT 60
           MDGNK+R+ D+GN  GGDDDGDLRRGPWTVEED+ LINYIANHGDGRWN LARCAGLKRT
Sbjct: 1   MDGNKDRQIDSGNFQGGDDDGDLRRGPWTVEEDIALINYIANHGDGRWNLLARCAGLKRT 60

Query: 61  GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYWR 120
           GKSCRLRWLNYLRPDVRRGNITLEEQLLIL+LH RWGNRWSKIAQ LPGRTDNEIKNYWR
Sbjct: 61  GKSCRLRWLNYLRPDVRRGNITLEEQLLILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWR 120

Query: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAAASTAVDGNRSYGSVARPASA 180
           TRVQKHAKQLKCDVNSKQFKDTMRYLW+PRLVERIQA+AAA+TAVDGN SYGSVA P   
Sbjct: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWIPRLVERIQASAAATTAVDGNGSYGSVAPP--- 180

Query: 181 AVMNSGSDFVSTPQVTPSYTSENSSSGGGGG----GSSMSDLTDCYNNFSCF-------- 240
            +MN+GSDFVST QVTPSY SENSSSGGG      GSS+S+LTDCYNNF CF        
Sbjct: 181 -LMNNGSDFVSTSQVTPSYASENSSSGGGSSDGTQGSSVSELTDCYNNFGCFSVGYGQDT 240

Query: 241 ---PVVPPPLQSPAPGFFNDETLDFQAMEQSSCQWMAADGGVDTSESLWNAADAGADYFW 292
              P  PPP+QS A GFFN+  LDFQAMEQSSC+W+A DGGVDTSE+ W+ A  G DYFW
Sbjct: 241 APPPPPPPPMQSSAVGFFNEGELDFQAMEQSSCEWLAEDGGVDTSENFWSTAGPGTDYFW 300

[Close]

BLAST of Cp4.1LG03g11950 vs. TAIR 10
Match: AT5G49620.1 (myb domain protein 78 )

HSP 1 Score: 285.4 bits (729), Expect = 5.1e-77
Identity = 159/285 (55.79%), Postives = 190/285 (66.67%), Query Frame = 0


Query: 18  DDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVR 77
           +++ D+RRGPWTVEED+ LINYIA+HG+GRWNSLARCA LKRTGKSCRLRWLNYLRPDVR
Sbjct: 21  EEEMDVRRGPWTVEEDLELINYIASHGEGRWNSLARCAELKRTGKSCRLRWLNYLRPDVR 80

Query: 78  RGNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSK 137
           RGNITLEEQLLILELH RWGNRWSKIAQ LPGRTDNEIKNYWRTRVQKHAKQLKCDVNS+
Sbjct: 81  RGNITLEEQLLILELHTRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSQ 140

Query: 138 QFKDTMRYLWMPRLVERIQAAAAASTAVDGNRSYGSVARPASAAVMNSGSDFVSTPQVTP 197
           QFKDTM+YLWMPRLVERIQAA+  S ++    +  S     +    N+  +         
Sbjct: 141 QFKDTMKYLWMPRLVERIQAASIGSVSMSSCVTTSSDQFVINNNNTNNVDNLALMSNPNG 200

Query: 198 SYTSENSSSGGGGGGSSMSDLTDCYNNFSCFPV------VPPPLQSP-----APGFFNDE 257
             T +NSS       S +SDLT+C  +   + +      V P + SP     + G  N +
Sbjct: 201 YITPDNSSV----AVSPVSDLTECQVSSEVWKIGQDENLVDPKMTSPNYMDNSSGLLNGD 260

Query: 258 TLDFQAMEQSSCQWMAADGGV--DTSESLWNAADAGADYFWFSQQ 290
               Q  +QS   W     G+  + S+S WN  +   + FW  QQ
Sbjct: 261 FTKMQ--DQSDLNWFENINGMVPNYSDSFWNIGN--DEDFWLLQQ 297

[Close]

BLAST of Cp4.1LG03g11950 vs. TAIR 10
Match: AT3G06490.1 (myb domain protein 108 )

HSP 1 Score: 284.6 bits (727), Expect = 8.7e-77
Identity = 172/324 (53.09%), Postives = 200/324 (61.73%), Query Frame = 0


Query: 5   KERRFDNGNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRTGKSC 64
           K R   N N+   +D+ DL+RGPWT EED  L+NYIA +G+GRWNSL+RCAGL+RTGKSC
Sbjct: 4   KGRSLKNNNM---EDEMDLKRGPWTAEEDFKLMNYIATNGEGRWNSLSRCAGLQRTGKSC 63

Query: 65  RLRWLNYLRPDVRRGNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYWRTRVQ 124
           RLRWLNYLRPDVRRGNITLEEQLLILELH RWGNRWSKIAQ LPGRTDNEIKNYWRTRVQ
Sbjct: 64  RLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQ 123

Query: 125 KHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAAAS--------TAVDGNRSYGSVAR 184
           KHAKQLKCDVNS+QFKDTM+YLWMPRLVERIQ+A+A+S        T   G+    S   
Sbjct: 124 KHAKQLKCDVNSQQFKDTMKYLWMPRLVERIQSASASSAAAATTTTTTTTGSAGTSSCIT 183

Query: 185 PASAAVM-------NSGSDFVSTPQVTPSYTSENSSSGGGGGGSSMSDLTDCYNNFSCFP 244
            ++   M       N G  F          T ENSS       S  SDLT+ Y+     P
Sbjct: 184 TSNNQFMNYDYNNNNMGQQF-GVMSNNDYITPENSSV----AVSPASDLTEYYS----AP 243

Query: 245 VVPPPLQSPAPG--FFNDETL-------------------DFQAM-EQSSCQWMA-ADGG 291
              P   S   G  ++ D+ L                   D  AM EQS+  W    +G 
Sbjct: 244 NPNPEYYSGQMGNSYYPDQNLVSSQLLPDNYFDYSGLLDEDLTAMQEQSNLSWFENINGA 303

[Close]

BLAST of Cp4.1LG03g11950 vs. TAIR 10
Match: AT5G49620.2 (myb domain protein 78 )

HSP 1 Score: 275.8 bits (704), Expect = 4.0e-74
Identity = 159/299 (53.18%), Postives = 190/299 (63.55%), Query Frame = 0


Query: 18  DDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVR 77
           +++ D+RRGPWTVEED+ LINYIA+HG+GRWNSLARCA LKRTGKSCRLRWLNYLRPDVR
Sbjct: 21  EEEMDVRRGPWTVEEDLELINYIASHGEGRWNSLARCAELKRTGKSCRLRWLNYLRPDVR 80

Query: 78  RGNITLEEQLLILELHCRWGN--------------RWSKIAQQLPGRTDNEIKNYWRTRV 137
           RGNITLEEQLLILELH RWGN              RWSKIAQ LPGRTDNEIKNYWRTRV
Sbjct: 81  RGNITLEEQLLILELHTRWGNSNEFDHKFSSSCEDRWSKIAQYLPGRTDNEIKNYWRTRV 140

Query: 138 QKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAAASTAVDGNRSYGSVARPASAAVM 197
           QKHAKQLKCDVNS+QFKDTM+YLWMPRLVERIQAA+  S ++    +  S     +    
Sbjct: 141 QKHAKQLKCDVNSQQFKDTMKYLWMPRLVERIQAASIGSVSMSSCVTTSSDQFVINNNNT 200

Query: 198 NSGSDFVSTPQVTPSYTSENSSSGGGGGGSSMSDLTDCYNNFSCFPV------VPPPLQS 257
           N+  +           T +NSS       S +SDLT+C  +   + +      V P + S
Sbjct: 201 NNVDNLALMSNPNGYITPDNSSV----AVSPVSDLTECQVSSEVWKIGQDENLVDPKMTS 260

Query: 258 P-----APGFFNDETLDFQAMEQSSCQWMAADGGV--DTSESLWNAADAGADYFWFSQQ 290
           P     + G  N +    Q  +QS   W     G+  + S+S WN  +   + FW  QQ
Sbjct: 261 PNYMDNSSGLLNGDFTKMQ--DQSDLNWFENINGMVPNYSDSFWNIGN--DEDFWLLQQ 311

[Close]

BLAST of Cp4.1LG03g11950 vs. TAIR 10
Match: AT1G48000.1 (myb domain protein 112 )

HSP 1 Score: 251.1 bits (640), Expect = 1.1e-66
Identity = 119/169 (70.41%), Postives = 138/169 (81.66%), Query Frame = 0


Query: 22  DLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVRRGNI 81
           ++RRGPWTVEEDM L++YI+ HG+GRWNSL+R AGL RTGKSCRLRWLNYLRPD+RRG+I
Sbjct: 31  EIRRGPWTVEEDMKLVSYISLHGEGRWNSLSRSAGLNRTGKSCRLRWLNYLRPDIRRGDI 90

Query: 82  TLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKD 141
           +L+EQ +ILELH RWGNRWSKIAQ LPGRTDNEIKNYWRTRVQKHAK LKCDVNSKQFKD
Sbjct: 91  SLQEQFIILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKLLKCDVNSKQFKD 150

Query: 142 TMRYLWMPRLVERIQAAAAASTAVDGNRSYGSVARPASAAVMNSGSDFV 191
           T+++LWMPRL+ERI  AA  S     N      +  A+A    S S+ V
Sbjct: 151 TIKHLWMPRLIERI--AATQSVQFTSNHYSPENSSVATATSSTSSSEAV 197

[Close]

BLAST of Cp4.1LG03g11950 vs. TAIR 10
Match: AT2G47190.1 (myb domain protein 2 )

HSP 1 Score: 241.9 bits (616), Expect = 6.5e-64
Identity = 110/153 (71.90%), Postives = 127/153 (83.01%), Query Frame = 0


Query: 11  NGNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLN 70
           N N    ++D D+R+GPWT EED  L+N+++ HGD RWN +AR +GLKRTGKSCRLRWLN
Sbjct: 8   NSNSPTHEEDSDVRKGPWTEEEDAILVNFVSIHGDARWNHIARSSGLKRTGKSCRLRWLN 67

Query: 71  YLRPDVRRGNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKHAKQL 130
           YLRPDVRRGNITLEEQ +IL+LH  WGNRWSKIAQ LPGRTDNEIKNYWRTRVQK AK L
Sbjct: 68  YLRPDVRRGNITLEEQFMILKLHSLWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQAKHL 127

Query: 131 KCDVNSKQFKDTMRYLWMPRLVERIQAAAAAST 164
           +CDVNS  FK+TMR +WMPRLVERI A +  +T
Sbjct: 128 RCDVNSNLFKETMRNVWMPRLVERINAQSLPTT 160

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g11950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGY3	7.2e-76	55.79	Transcription factor MYB78 OS=Arabidopsis thaliana OX=3702 GN=MYB78 PE=1 SV=1	[more]
Q9LDE1	1.2e-75	53.09	Transcription factor MYB108 OS=Arabidopsis thaliana OX=3702 GN=MYB108 PE=1 SV=1	[more]
Q10MB4	7.4e-73	90.71	Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 ...	[more]
Q2QZJ8	1.3e-69	69.89	Transcription factor JAMYB OS=Oryza sativa subsp. japonica OX=39947 GN=JAMYB PE=...	[more]
Q9C9G7	2.2e-56	54.68	Transcription factor MYB62 OS=Arabidopsis thaliana OX=3702 GN=MYB62 PE=2 SV=1	[more]

BLAST of Cp4.1LG03g11950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023527593.1	2.85e-217	100.00	transcription factor MYB78-like [Cucurbita pepo subsp. pepo]	[more]
XP_022955976.1	1.41e-212	98.29	transcription factor MYB78-like [Cucurbita moschata]	[more]
KAG6582156.1	4.04e-212	98.29	Transcription factor MYB2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022979886.1	4.78e-204	93.98	transcription factor MYB78-like [Cucurbita maxima]	[more]
XP_038901988.1	7.18e-192	88.96	MYB-like transcription factor EOBI [Benincasa hispida]	[more]

BLAST of Cp4.1LG03g11950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GVA9	6.83e-213	98.29	transcription factor MYB78-like OS=Cucurbita moschata OX=3662 GN=LOC111457810 PE...	[more]
A0A6J1IS14	2.31e-204	93.98	transcription factor MYB78-like OS=Cucurbita maxima OX=3661 GN=LOC111479442 PE=4...	[more]
A0A0A0L5Y4	2.32e-178	82.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G168940 PE=4 SV=1	[more]
A0A1S3AXP8	1.99e-171	80.77	transcription factor MYB108 OS=Cucumis melo OX=3656 GN=LOC103483906 PE=4 SV=1	[more]
A0A6J1I7V3	2.19e-171	78.50	transcription factor MYB78-like OS=Cucurbita maxima OX=3661 GN=LOC111470802 PE=4...	[more]

BLAST of Cp4.1LG03g11950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49620.1	5.1e-77	55.79	myb domain protein 78	[more]
AT3G06490.1	8.7e-77	53.09	myb domain protein 108	[more]
AT5G49620.2	4.0e-74	53.18	myb domain protein 78	[more]
AT1G48000.1	1.1e-66	70.41	myb domain protein 112	[more]
AT2G47190.1	6.5e-64	71.90	myb domain protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 24..74 e-value: 6.6E-15 score: 65.5 coord: 77..125 e-value: 5.5E-12 score: 55.8
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 73..123 score: 9.628088
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 20..72 score: 11.753157
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 27..72 e-value: 2.76576E-12 score: 58.3558
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 98..121 e-value: 3.8477E-7 score: 44.1034
None	No IPR available	GENE3D	1.10.10.60		coord: 82..145 e-value: 2.2E-17 score: 64.8
None	No IPR available	GENE3D	1.10.10.60		coord: 26..77 e-value: 1.3E-18 score: 68.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..213
None	No IPR available	PANTHER	PTHR45675:SF45	TRANSCRIPTION FACTOR MYB108	coord: 16..190
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 25..72 e-value: 1.1E-15 score: 57.5 coord: 78..121 e-value: 6.8E-13 score: 48.6
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 77..127 score: 18.644543
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 20..76 score: 21.768452
IPR044676	MYB-like transcription factor EOBI/EOBII-like, plant	PANTHER	PTHR45675	MYB TRANSCRIPTION FACTOR-RELATED-RELATED	coord: 16..190
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 23..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g11950.1	Cp4.1LG03g11950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding