Cp4.1LG03g11930 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG03g11930
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Stress-response A/B barrel domain-containing protein
Location	Cp4.1LG03: 10696668 .. 10701389 (+)
RNA-Seq Expression	Cp4.1LG03g11930
Synteny	Cp4.1LG03g11930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTACTCTTAGACTTTAATCCATTGTTTTCTTTTCTCGGAAAGTGCCCTAACTGGTTTGAAGTGATGGAGGAACCGAAAGGCATTGTGAAGCACATTTTGCTGGCGAAATTCAAAGATGGAATCCCAGAGGAACAAATCGACCAACTCATCAAGGGATATGCCAATCTCGTCAATCTCATTGAACCTATGAAGGCTTTCCAGTGGTAATTTTCTCAACTCGGCAATTCTAATGCGTTTTATCATCAATTATCATTCGAGATATTGTTGCTAATTCGTGCATCGCCCCTTGCTGGCTTTTGTTTTTGTCATTTTCGATGTCTTAGATGCCGTCATCTTGATTACGATTGTATGTTGAAAGTTGAATAGTTTTGGATGGATAGGTTGATTGGGTTGGGGTTTTTGCATCCCTAATTTTAGGTCCAGATTCTAGATTCCTGAAGCGCTGAGTAAATGATGCGAACTGGATGTGGGCCATTATAGTTATTATTCTAGATTCATTGGTTTCTGAACAAATTTTAGCACACTATAGTTAGTCTCTATGGCTGAATCTACAGCCAGCTGATGTGGGGCATGACAGAAATCTTTATTCTCATTCCTTTCCTCTCCATCTACCACATACTTTCAAAGTTTGGTAAATCTAGAAAGTAAGACGAGAGAATGAAGTGGCGAAGTTAACTCACTCATGGCTTTATGCACCAACAGCATTCATGCACTATTCTCCCAAGAAAAAACTTTACCTTTTTAGGGTGATTTACTATTCATACGTGGGATTTATTGCTTCGACTTTTTTTCTCTATGTCTATCATCAAAGATTTTGTAGAGAAGACTCCATTAGCAAGGAAGCCATGTTAATGAGTTTGCTTCATTTAACAATACGGCTGGGACAAGGTCGAGACTCAATTCTGCCCATTTCGTAACTTCATTATCCTTTAGATTTCTATCAAGCTTTAGTTTCTAGAATTTGTTGACGTCATTTCACGTTCCTTTGGTCGTGACTCTTTTGCTATGAGAGAAACTATATAAAAGTGGATACTATTGGGTTAGCGTGGTGTTTTCAATCCATGGGTTAGTCCAAAATGATGTGCCTCGTCCATTACCCACCCTATGGAGAATTCAGTTGGTGATGAGGTTTTGATATTTTTTTTTATGTACTTCCATGACCTCTTTGCAGAAGATAGAGGTGGTCGATTTTTATATGATGTAGGAGTGTATTTATCCTTTATAAGTTTTCTCCACAAAGGGTTTTCCTTGCGATGATATCTCCATATTCATTTTGCGAGGGGAGTTTTGTTTTTCTTTATTGAAAATAGACCAGAGTCCTCTTTTTTCTGTTAGGAGATTTATGATATTCCATCGAACAAGGTGTGGTTCACCTTTCTACCGATAGTTTTTGAATAATCTTTCTATATATGTGGTTGTAGGATATTTAGATTACCTAGTATCTAGTGAATTTAGATTACCTATCAATTTAGATTTAGTCGATATTTCCCTATAAAGAGACACGTACTTCTCTGAAAATTAATAATAAAAAAACAACAGCCTAATTTAGACTTGTAACATGGTATCAGTGAATAGAACTAAACCCTAATTCAATCAGTGAAGCCTTTATCAGTGCCGATCATTCATTGTGATCAAGTTTCGTTTGAAGCCGTGACCAATTTTCATTTAGATCGTGAAAAAAGAAAAAAGCTCTCTGATGTGGATCTACTTTTACATACTACCTAAAATCCACCATGCAAGCTTTTTTTTTTTTTTTTTTTCACTCCAAAAGCGTTCTATCGTTCCGCAAGTTATCCATCTGCCCACCGAGAGATATTGAAGTCATTCTTCTTATGAAATTGTTGAAATGTCTCATTCTTCTAGTGACTTTTCCTCTAGTCTTTTCATGTACCCACCGAGATATTAAGTCGCCAATCAAAAGCCAATTTCTCTATGCAAAGCCAAGTTCTCTAATCAAAAGCCAATTCTTTGTAAACCTTGGAGTTTGTTTGTAGAATGGTTTGAGAACAACTCTATTTTTTAGCAAAATCTAGTGAAATATGTTTATATAGTTATATCTTTCAAAGATGATTAAAAAAAAAAAAAAAAAGAATATTGGAACACTTGGGATTAAGATAGATATTATGATTTAGGAATCCATGAACATAACTCAACTACAAGTAAAATATAGCGATACTTACGACAATTCAATAATCCAATGCTAATTTTCTATTTACCCAAACATTACATGAAAATAAAAAAAGATTGAATAGAAAATGTTATTTTTGCTGTATGTTTTCATCTGTTGCATTCTTTCACATAGGATTTACTTTTAGAATAAATAAGTTGGTCTTTCTATTAAGATAACAAACTTTTGAGGGATGATTTCAATATTCATAATAGCATTATGGTTTTTGTGTGCAAGCTCTCCAAGTTTTTGAAGATATTGAAAATTATTTGTTCTTTCGATGCTTATAGTCATGGCTAAATTTTTATGTGGTATTTGTTGTTTTGTATTGTTTCTTCTTTTTTTTCTTTCTTTGAATGGTCCCATACACAAAATTTTCATGCGTTGTCTCTGCACCCCTGCCTCCTTTATCACTGAGCGGTCATTTAGGGGTCTTAACTGGTGATTCGGACTGTTTCCCTCTCGATGATGAAGCTTAGCTGGTGATCCGGACCGTTTCCCTCTCGATGATGAAGCTTATCCCCTATCGTCTCACTGGTTGACCTTAACCCATGTTATTTTGAGATCATATCTAGTATTCAGAGTTTGCCTCGATTTGATACCGCTCTTGCGGCCCGCACCGAAACAGTGCTTTCCTTATGTTCGTCAATAGTATATTGAAACTTTATGCATTTGTTTATCTACTTGCATACATATAAGTTTAGCTTTGATGTTCATCAATGACCTTCAGCATTTCTTTTATCTTCTACATGACAGCGGCAAGGATGTTAGCATTGAAAATCTACACCAAGGTTTCACTCACGTCTTTGAATCCACATTTGAGAGTACAGAAGGCATAGCAGAATACGTATCTCATCCAGCGCATGTGGAATTCGCAAATTTGTTCCTTGCATCCTTGGACAAAGTTGTCGTCATCGACTACAAAGCGACCATAATTCATAGCTAATTTGGAGCCTAAAATTATGGCTGCTTTATACTGTCTTGTGGCATAAATAAATGTAAGCCCTTTTTCCACCATAATCTTAGATGATGGTTCTACTTGAAGGCTTTGTTATTATCAATTTATTTGTATACACTGTTCTGTTGCTTGGTTATCAAAGTGATTGCTTGGGTTTCTAATCATTGTGTTCTAATTCGCGTTTCGCAACTTAAGCATTTCATGTTATTTGAAACTCGGGTATAAAAAGTACAACATTATTGTAACCATTCCAAAATGTAAGCTGAAAAACAGCAAATCTGTATTCGAAACACTTCGAACCCTTCAATGAAGAGAGTGATAAGGAAAAAAAATGGAAGAACGCTTGAATTGGCTTATATATGAATTGGCTTGTCGTATGTTGCCATAGCAGCCTCCTTCAGTGCCTCGCTCATTGTGGGATGCGCATGGCAAACGCGGGCTATGTCCTCACTTGAAGCGTCATATTGTAAAGCGATGGCTGCCTCGTGGATCAGCTCCCCTGCATTGGGAGCCATTATATGCACTCCTAATATCTTGTCTGTTTCCTTTTCAGCCAATATCTTCACAATACCTTCAGCATCATCAATTGCCTTGGCTCGACTATTTGCCAAGAATGGGAACTTCCCGACACGATAAGCAACCCCGAGTGCCTTCACCTGCTCCTCCGTCTTCCCGACAGAGGCGACCTCAGGGTGTGTATATACAACACCAGGGACCTTGTCATAGTCCACATGACCTGTCTTACCAGCCAAAAACTCTACGCAAGCAACACCGTCTTCTTCGGCTTTATGAGCTAACATCGGCCCAGGAATTATGTCCCCAATAGCATAGATTCCAGGCACATTTGTGGCAAATCTATCATTTACTAAAATTCGACCTATCTTATCCGTTTCCACTCCTACCTTCTCGAGTCCAAGTCCAGAAGTGAACGGAGTTCTACCAGCAGACACAAGAACAACATCAGCCTCGAGAGTGGTTCGGTCTCCACCGGCTGCTGGCTCAAGGGTCAGCTTTACACCATCTCCGGATGTGTCAACTCCTACCACCTTAGTTTTGAGCATGAATTTCATTCCTTGCTTCTCTAGAGAGCGCTGGAATTGCTTGCGAACTTCTGCATCCATGGTGGGGACAATATCAGGAGCAAACTCAACAACAGTTATCTCGGAGCCAAGTCGTCCCCACACCGAACCCATCTCTAGGCCAATGTAGCCAGCGCCAATGACTACAAGCTTTTTGGGAATTTCAGACAAAGCTAAAGCTCCAGTAGATGAAATAATTCTCTTCTCATCAATGGTGATCCCAGGCAAGGACTTGACATCAGAACCAGTAGCAATTATAATGTTCTTTCCTTTCACAATCGTGTTTCCCCCGTCGATCGTGTCAACAGAAACTTCAGAAGGGGAGATTAGCTTTCCATAACCTTTGACATAGTTCACTTTATTCTTCTTAAACAAGCCTTCAATACCCCGCGTCAGATTAGCAACTGCTGTATCTTTCTGTGCCATCATGGCAGGCAAATCAACCTCAACAGAAGAAAACTTCACGCCATGGTTTGCAAATGCATGTTTAGCTTCATGATACATGTGAGAGGAATGA

mRNA sequence

TGTACTCTTAGACTTTAATCCATTGTTTTCTTTTCTCGGAAAGTGCCCTAACTGGTTTGAAGTGATGGAGGAACCGAAAGGCATTGTGAAGCACATTTTGCTGGCGAAATTCAAAGATGGAATCCCAGAGGAACAAATCGACCAACTCATCAAGGGATATGCCAATCTCGTCAATCTCATTGAACCTATGAAGGCTTTCCAGTGCGGCAAGGATGTTAGCATTGAAAATCTACACCAAGGTTTCACTCACGTCTTTGAATCCACATTTGAGAGTACAGAAGGCATAGCAGAATACGTATCTCATCCAGCGCATGTGGAATTCGCAAATTTGTTCCTTGCATCCTTGGACAAAGTTGTCGTCATCGACTACAAAGCGACCATAATTCATAGCTAATTTGGAGCCTAAAATTATGGCTGCTTTATACTGTCTTGTGGCATAAATAAATGTAAGCCCTTTTTCCACCATAATCTTAGATGATGGTTCTACTTGAAGGCTTTGTTATTATCAATTTATTTGTATACACTGTTCTGTTGCTTGGTTATCAAAGTGATTGCTTGGGTTTCTAATCATTGTGTTCTAATTCGCGTTTCGCAACTTAAGCATTTCATGTTATTTGAAACTCGGGTATAAAAAGTACAACATTATTGTAACCATTCCAAAATGTAAGCTGAAAAACAGCAAATCTGTATTCGAAACACTTCGAACCCTTCAATGAAGAGAGTGATAAGGAAAAAAAATGGAAGAACGCTTGAATTGGCTTATATATGAATTGGCTTGTCGTATGTTGCCATAGCAGCCTCCTTCAGTGCCTCGCTCATTGTGGGATGCGCATGGCAAACGCGGGCTATGTCCTCACTTGAAGCGTCATATTGTAAAGCGATGGCTGCCTCGTGGATCAGCTCCCCTGCATTGGGAGCCATTATATGCACTCCTAATATCTTGTCTGTTTCCTTTTCAGCCAATATCTTCACAATACCTTCAGCATCATCAATTGCCTTGGCTCGACTATTTGCCAAGAATGGGAACTTCCCGACACGATAAGCAACCCCGAGTGCCTTCACCTGCTCCTCCGTCTTCCCGACAGAGGCGACCTCAGGGTGTGTATATACAACACCAGGGACCTTGTCATAGTCCACATGACCTGTCTTACCAGCCAAAAACTCTACGCAAGCAACACCGTCTTCTTCGGCTTTATGAGCTAACATCGGCCCAGGAATTATGTCCCCAATAGCATAGATTCCAGGCACATTTGTGGCAAATCTATCATTTACTAAAATTCGACCTATCTTATCCGTTTCCACTCCTACCTTCTCGAGTCCAAGTCCAGAAGTGAACGGAGTTCTACCAGCAGACACAAGAACAACATCAGCCTCGAGAGTGGTTCGGTCTCCACCGGCTGCTGGCTCAAGGGTCAGCTTTACACCATCTCCGGATGTGTCAACTCCTACCACCTTAGTTTTGAGCATGAATTTCATTCCTTGCTTCTCTAGAGAGCGCTGGAATTGCTTGCGAACTTCTGCATCCATGGTGGGGACAATATCAGGAGCAAACTCAACAACAGTTATCTCGGAGCCAAGTCGTCCCCACACCGAACCCATCTCTAGGCCAATGTAGCCAGCGCCAATGACTACAAGCTTTTTGGGAATTTCAGACAAAGCTAAAGCTCCAGTAGATGAAATAATTCTCTTCTCATCAATGGTGATCCCAGGCAAGGACTTGACATCAGAACCAGTAGCAATTATAATGTTCTTTCCTTTCACAATCGTGTTTCCCCCGTCGATCGTGTCAACAGAAACTTCAGAAGGGGAGATTAGCTTTCCATAACCTTTGACATAGTTCACTTTATTCTTCTTAAACAAGCCTTCAATACCCCGCGTCAGATTAGCAACTGCTGTATCTTTCTGTGCCATCATGGCAGGCAAATCAACCTCAACAGAAGAAAACTTCACGCCATGGTTTGCAAATGCATGTTTAGCTTCATGATACATGTGAGAGGAATGA

Coding sequence (CDS)

ATGGAGGAACCGAAAGGCATTGTGAAGCACATTTTGCTGGCGAAATTCAAAGATGGAATCCCAGAGGAACAAATCGACCAACTCATCAAGGGATATGCCAATCTCGTCAATCTCATTGAACCTATGAAGGCTTTCCAGTGCGGCAAGGATGTTAGCATTGAAAATCTACACCAAGGTTTCACTCACGTCTTTGAATCCACATTTGAGAGTACAGAAGGCATAGCAGAATACGTATCTCATCCAGCGCATGTGGAATTCGCAAATTTGTTCCTTGCATCCTTGGACAAAGTTGTCGTCATCGACTACAAAGCGACCATAATTCATAGCTAA

Protein sequence

MEEPKGIVKHILLAKFKDGIPEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVVVIDYKATIIHS

Homology

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BLAST of Cp4.1LG03g11930 vs. ExPASy Swiss-Prot
Match: Q9LUV2 (Stress-response A/B barrel domain-containing protein HS1 OS=Arabidopsis thaliana OX=3702 GN=HS1 PE=1 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.1e-42
Identity = 81/107 (75.70%), Postives = 94/107 (87.85%), Query Frame = 0


Query: 1   MEEPKGIVKHILLAKFKDGIPEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGF 60
           MEE KG VKH+LLA FKDG+  E+I++LIKGYANLVNLIEPMKAF  GKDVSIENLHQG+
Sbjct: 1   MEEAKGPVKHVLLASFKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDVSIENLHQGY 60

Query: 61  THVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVVVIDYKATII 108
           TH+FESTFES E +AEY++HPAHVEFA +FL SLDKV+VIDYK T +
Sbjct: 61  THIFESTFESKEAVAEYIAHPAHVEFATIFLGSLDKVLVIDYKPTSV 107

[Close]

BLAST of Cp4.1LG03g11930 vs. ExPASy Swiss-Prot
Match: I6WU39 (Olivetolic acid cyclase OS=Cannabis sativa OX=3483 GN=OAC PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 6.1e-20
Identity = 44/95 (46.32%), Postives = 65/95 (68.42%), Query Frame = 0


Query: 8   VKHILLAKFKDGIPEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFEST 67
           VKH+++ KFKD I E Q ++  K Y NLVN+I  MK    GKDV+ +N  +G+TH+ E T
Sbjct: 3   VKHLIVLKFKDEITEAQKEEFFKTYVNLVNIIPAMKDVYWGKDVTQKNKEEGYTHIVEVT 62

Query: 68  FESTEGIAEYVSHPAHVEFANLFLASLDKVVVIDY 103
           FES E I +Y+ HPAHV F +++ +  +K+++ DY
Sbjct: 63  FESVETIQDYIIHPAHVGFGDVYRSFWEKLLIFDY 97

[Close]

BLAST of Cp4.1LG03g11930 vs. ExPASy Swiss-Prot
Match: Q9FK81 (Stress-response A/B barrel domain-containing protein At5g22580 OS=Arabidopsis thaliana OX=3702 GN=At5g22580 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 5.7e-18
Identity = 42/102 (41.18%), Postives = 69/102 (67.65%), Query Frame = 0


Query: 9   KHILLAKFKDGIPEEQIDQLIKGYANLVNLIEPMKAFQCGKD-VSIENLHQGFTHVFEST 68
           KH+++ KFK+   + ++D+++KG  NLV+ I+ +K+F+ G+D  S + L QGFTH F  T
Sbjct: 7   KHLVVVKFKE---DTKVDEILKGLENLVSQIDTVKSFEWGEDKESHDMLRQGFTHAFSMT 66

Query: 69  FESTEGIAEYVSHPAHVEFANLFLASLDKVVVIDYKATIIHS 110
           FE+ +G   + SHP HVEF+  F A +DK+V++D+    + S
Sbjct: 67  FENKDGYVAFTSHPLHVEFSAAFTAVIDKIVLLDFPVAAVKS 105

[Close]

BLAST of Cp4.1LG03g11930 vs. ExPASy Swiss-Prot
Match: Q9SIP1 (Stress-response A/B barrel domain-containing protein UP3 OS=Arabidopsis thaliana OX=3702 GN=UP3 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 9.4e-05
Identity = 32/104 (30.77%), Postives = 48/104 (46.15%), Query Frame = 0


Query: 7   IVKHILLAKFKDGIPEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQ-----GFT 66
           I++HI+L K KD     +I  +I     L  L + +        +S   LH+      FT
Sbjct: 48  IIEHIVLFKTKDDADSTKITSMINNLNALAYLDQVL-------HISTSPLHRISSATAFT 107

Query: 67  HVFESTFESTEGIAEYVSHPAHVEFA-NLFLASLDKVVVIDYKA 105
           HV  S +ES E +A Y +HP HV       L   D ++ +D+ A
Sbjct: 108 HVLHSRYESKEDLASYAAHPDHVRVVKESVLPICDDIMAVDWIA 144

[Close]

BLAST of Cp4.1LG03g11930 vs. NCBI nr
Match: XP_023527594.1 (stress-response A/B barrel domain-containing protein HS1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 220 bits (561), Expect = 2.28e-72
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MEEPKGIVKHILLAKFKDGIPEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGF 60
           MEEPKGIVKHILLAKFKDGIPEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGF
Sbjct: 1   MEEPKGIVKHILLAKFKDGIPEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGF 60

Query: 61  THVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVVVIDYKATIIHS 109
           THVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVVVIDYKATIIHS
Sbjct: 61  THVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVVVIDYKATIIHS 109

[Close]

BLAST of Cp4.1LG03g11930 vs. NCBI nr
Match: XP_022979995.1 (stress-response A/B barrel domain-containing protein HS1 [Cucurbita maxima] >KAG6582154.1 Stress-response A/B barrel domain-containing protein HS1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018554.1 Stress-response A/B barrel domain-containing protein HS1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 217 bits (552), Expect = 5.38e-71
Identity = 107/109 (98.17%), Postives = 108/109 (99.08%), Query Frame = 0


Query: 1   MEEPKGIVKHILLAKFKDGIPEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGF 60
           MEEPKGIVKHILLAKFKDGI EEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGF
Sbjct: 1   MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGF 60

Query: 61  THVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVVVIDYKATIIHS 109
           THVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKV+VIDYKATIIHS
Sbjct: 61  THVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVIDYKATIIHS 109

[Close]

BLAST of Cp4.1LG03g11930 vs. NCBI nr
Match: XP_022955948.1 (stress-response A/B barrel domain-containing protein HS1 [Cucurbita moschata])

HSP 1 Score: 216 bits (550), Expect = 1.09e-70
Identity = 106/109 (97.25%), Postives = 108/109 (99.08%), Query Frame = 0


Query: 1   MEEPKGIVKHILLAKFKDGIPEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGF 60
           MEEPKGIVKHILLAKFKDGI EEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGF
Sbjct: 1   MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGF 60

Query: 61  THVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVVVIDYKATIIHS 109
           THVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKV+VIDYKAT+IHS
Sbjct: 61  THVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVIDYKATLIHS 109

[Close]

BLAST of Cp4.1LG03g11930 vs. NCBI nr
Match: XP_038893347.1 (stress-response A/B barrel domain-containing protein HS1-like [Benincasa hispida])

HSP 1 Score: 199 bits (505), Expect = 7.96e-64
Identity = 96/109 (88.07%), Postives = 104/109 (95.41%), Query Frame = 0


Query: 1   MEEPKGIVKHILLAKFKDGIPEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGF 60
           M E KG+VKHILLAKFKD I EEQID+LIKGYANLVNLIEPMKAFQCGKDVSIENLHQGF
Sbjct: 1   MGESKGVVKHILLAKFKDEITEEQIDKLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGF 60

Query: 61  THVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVVVIDYKATIIHS 109
           THVFESTFEST+GIAEYVSHPAHVE+ANLFL+SLDKV+VIDYK T+IH+
Sbjct: 61  THVFESTFESTQGIAEYVSHPAHVEYANLFLSSLDKVIVIDYKPTLIHN 109

[Close]

BLAST of Cp4.1LG03g11930 vs. NCBI nr
Match: XP_022137755.1 (stress-response A/B barrel domain-containing protein HS1 [Momordica charantia])

HSP 1 Score: 197 bits (501), Expect = 3.25e-63
Identity = 96/109 (88.07%), Postives = 103/109 (94.50%), Query Frame = 0


Query: 1   MEEPKGIVKHILLAKFKDGIPEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGF 60
           ME  K IVKHILLAKFKD I E+QID+LIKGYANL+NLIEPMKAFQCGKDVSIENLHQGF
Sbjct: 1   MEGGKRIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQGF 60

Query: 61  THVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVVVIDYKATIIHS 109
           THVFESTFEST+GIAEY+SHPAHVEFANLFLASLDKV+VIDYK T+IHS
Sbjct: 61  THVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVIDYKPTLIHS 109

[Close]

BLAST of Cp4.1LG03g11930 vs. ExPASy TrEMBL
Match: A0A6J1IUX3 (stress-response A/B barrel domain-containing protein HS1 OS=Cucurbita maxima OX=3661 GN=LOC111479521 PE=4 SV=1)

HSP 1 Score: 217 bits (552), Expect = 2.61e-71
Identity = 107/109 (98.17%), Postives = 108/109 (99.08%), Query Frame = 0


Query: 1   MEEPKGIVKHILLAKFKDGIPEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGF 60
           MEEPKGIVKHILLAKFKDGI EEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGF
Sbjct: 1   MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGF 60

Query: 61  THVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVVVIDYKATIIHS 109
           THVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKV+VIDYKATIIHS
Sbjct: 61  THVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVIDYKATIIHS 109

[Close]

BLAST of Cp4.1LG03g11930 vs. ExPASy TrEMBL
Match: A0A6J1GVE7 (stress-response A/B barrel domain-containing protein HS1 OS=Cucurbita moschata OX=3662 GN=LOC111457783 PE=4 SV=1)

HSP 1 Score: 216 bits (550), Expect = 5.26e-71
Identity = 106/109 (97.25%), Postives = 108/109 (99.08%), Query Frame = 0


Query: 1   MEEPKGIVKHILLAKFKDGIPEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGF 60
           MEEPKGIVKHILLAKFKDGI EEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGF
Sbjct: 1   MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGF 60

Query: 61  THVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVVVIDYKATIIHS 109
           THVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKV+VIDYKAT+IHS
Sbjct: 61  THVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVIDYKATLIHS 109

[Close]

BLAST of Cp4.1LG03g11930 vs. ExPASy TrEMBL
Match: A0A6J1C7K4 (stress-response A/B barrel domain-containing protein HS1 OS=Momordica charantia OX=3673 GN=LOC111009119 PE=4 SV=1)

HSP 1 Score: 197 bits (501), Expect = 1.57e-63
Identity = 96/109 (88.07%), Postives = 103/109 (94.50%), Query Frame = 0


Query: 1   MEEPKGIVKHILLAKFKDGIPEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGF 60
           ME  K IVKHILLAKFKD I E+QID+LIKGYANL+NLIEPMKAFQCGKDVSIENLHQGF
Sbjct: 1   MEGGKRIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQGF 60

Query: 61  THVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVVVIDYKATIIHS 109
           THVFESTFEST+GIAEY+SHPAHVEFANLFLASLDKV+VIDYK T+IHS
Sbjct: 61  THVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVIDYKPTLIHS 109

[Close]

BLAST of Cp4.1LG03g11930 vs. ExPASy TrEMBL
Match: A0A1S3AYB2 (stress-response A/B barrel domain-containing protein HS1 OS=Cucumis melo OX=3656 GN=LOC103483909 PE=4 SV=1)

HSP 1 Score: 196 bits (499), Expect = 3.17e-63
Identity = 95/107 (88.79%), Postives = 102/107 (95.33%), Query Frame = 0


Query: 1   MEEPKGIVKHILLAKFKDGIPEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGF 60
           M E KG+VKHILLAKFKDGI EEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGF
Sbjct: 1   MGESKGVVKHILLAKFKDGILEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGF 60

Query: 61  THVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVVVIDYKATII 107
           THVFESTFEST+GIAEY+SHPAHVEFAN FL+SLDKV+VIDYK T++
Sbjct: 61  THVFESTFESTQGIAEYISHPAHVEFANKFLSSLDKVIVIDYKPTLV 107

[Close]

BLAST of Cp4.1LG03g11930 vs. ExPASy TrEMBL
Match: A0A0A0L972 (Stress-response A/B barrel domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G168980 PE=4 SV=1)

HSP 1 Score: 194 bits (494), Expect = 1.84e-62
Identity = 94/107 (87.85%), Postives = 102/107 (95.33%), Query Frame = 0


Query: 1   MEEPKGIVKHILLAKFKDGIPEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGF 60
           M + KG+VKHILLAKFK+GI EEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGF
Sbjct: 1   MGDSKGVVKHILLAKFKNGISEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGF 60

Query: 61  THVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVVVIDYKATII 107
           THVFESTFEST+GIAEY+SHPAHVEFAN FL+SLDKV+VIDYK T+I
Sbjct: 61  THVFESTFESTQGIAEYISHPAHVEFANKFLSSLDKVIVIDYKPTLI 107

[Close]

BLAST of Cp4.1LG03g11930 vs. TAIR 10
Match: AT3G17210.1 (heat stable protein 1 )

HSP 1 Score: 173.7 bits (439), Expect = 8.1e-44
Identity = 81/107 (75.70%), Postives = 94/107 (87.85%), Query Frame = 0


Query: 1   MEEPKGIVKHILLAKFKDGIPEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGF 60
           MEE KG VKH+LLA FKDG+  E+I++LIKGYANLVNLIEPMKAF  GKDVSIENLHQG+
Sbjct: 1   MEEAKGPVKHVLLASFKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDVSIENLHQGY 60

Query: 61  THVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVVVIDYKATII 108
           TH+FESTFES E +AEY++HPAHVEFA +FL SLDKV+VIDYK T +
Sbjct: 61  THIFESTFESKEAVAEYIAHPAHVEFATIFLGSLDKVLVIDYKPTSV 107

[Close]

BLAST of Cp4.1LG03g11930 vs. TAIR 10
Match: AT5G22580.1 (Stress responsive A/B Barrel Domain )

HSP 1 Score: 91.7 bits (226), Expect = 4.0e-19
Identity = 42/102 (41.18%), Postives = 69/102 (67.65%), Query Frame = 0


Query: 9   KHILLAKFKDGIPEEQIDQLIKGYANLVNLIEPMKAFQCGKD-VSIENLHQGFTHVFEST 68
           KH+++ KFK+   + ++D+++KG  NLV+ I+ +K+F+ G+D  S + L QGFTH F  T
Sbjct: 7   KHLVVVKFKE---DTKVDEILKGLENLVSQIDTVKSFEWGEDKESHDMLRQGFTHAFSMT 66

Query: 69  FESTEGIAEYVSHPAHVEFANLFLASLDKVVVIDYKATIIHS 110
           FE+ +G   + SHP HVEF+  F A +DK+V++D+    + S
Sbjct: 67  FENKDGYVAFTSHPLHVEFSAAFTAVIDKIVLLDFPVAAVKS 105

[Close]

BLAST of Cp4.1LG03g11930 vs. TAIR 10
Match: AT2G31670.1 (Stress responsive alpha-beta barrel domain protein )

HSP 1 Score: 47.8 bits (112), Expect = 6.7e-06
Identity = 32/104 (30.77%), Postives = 48/104 (46.15%), Query Frame = 0


Query: 7   IVKHILLAKFKDGIPEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQ-----GFT 66
           I++HI+L K KD     +I  +I     L  L + +        +S   LH+      FT
Sbjct: 48  IIEHIVLFKTKDDADSTKITSMINNLNALAYLDQVL-------HISTSPLHRISSATAFT 107

Query: 67  HVFESTFESTEGIAEYVSHPAHVEFA-NLFLASLDKVVVIDYKA 105
           HV  S +ES E +A Y +HP HV       L   D ++ +D+ A
Sbjct: 108 HVLHSRYESKEDLASYAAHPDHVRVVKESVLPICDDIMAVDWIA 144

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g11930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUV2	1.1e-42	75.70	Stress-response A/B barrel domain-containing protein HS1 OS=Arabidopsis thaliana...	[more]
I6WU39	6.1e-20	46.32	Olivetolic acid cyclase OS=Cannabis sativa OX=3483 GN=OAC PE=1 SV=1	[more]
Q9FK81	5.7e-18	41.18	Stress-response A/B barrel domain-containing protein At5g22580 OS=Arabidopsis th...	[more]
Q9SIP1	9.4e-05	30.77	Stress-response A/B barrel domain-containing protein UP3 OS=Arabidopsis thaliana...	[more]

BLAST of Cp4.1LG03g11930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023527594.1	2.28e-72	100.00	stress-response A/B barrel domain-containing protein HS1 [Cucurbita pepo subsp. ...	[more]
XP_022979995.1	5.38e-71	98.17	stress-response A/B barrel domain-containing protein HS1 [Cucurbita maxima] >KAG...	[more]
XP_022955948.1	1.09e-70	97.25	stress-response A/B barrel domain-containing protein HS1 [Cucurbita moschata]	[more]
XP_038893347.1	7.96e-64	88.07	stress-response A/B barrel domain-containing protein HS1-like [Benincasa hispida...	[more]
XP_022137755.1	3.25e-63	88.07	stress-response A/B barrel domain-containing protein HS1 [Momordica charantia]	[more]

BLAST of Cp4.1LG03g11930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IUX3	2.61e-71	98.17	stress-response A/B barrel domain-containing protein HS1 OS=Cucurbita maxima OX=...	[more]
A0A6J1GVE7	5.26e-71	97.25	stress-response A/B barrel domain-containing protein HS1 OS=Cucurbita moschata O...	[more]
A0A6J1C7K4	1.57e-63	88.07	stress-response A/B barrel domain-containing protein HS1 OS=Momordica charantia ...	[more]
A0A1S3AYB2	3.17e-63	88.79	stress-response A/B barrel domain-containing protein HS1 OS=Cucumis melo OX=3656...	[more]
A0A0A0L972	1.84e-62	87.85	Stress-response A/B barrel domain-containing protein OS=Cucumis sativus OX=3659 ...	[more]

BLAST of Cp4.1LG03g11930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17210.1	8.1e-44	75.70	heat stable protein 1	[more]
AT5G22580.1	4.0e-19	41.18	Stress responsive A/B Barrel Domain	[more]
AT2G31670.1	6.7e-06	30.77	Stress responsive alpha-beta barrel domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013097	Stress responsive alpha-beta barrel	SMART	SM00886	Dabb_2	coord: 8..104 e-value: 2.4E-28 score: 110.2
IPR013097	Stress responsive alpha-beta barrel	PFAM	PF07876	Dabb	coord: 8..103 e-value: 1.2E-29 score: 102.8
IPR013097	Stress responsive alpha-beta barrel	PROSITE	PS51502	S_R_A_B_BARREL	coord: 8..102 score: 32.432571
None	No IPR available	GENE3D	3.30.70.100		coord: 1..108 e-value: 7.0E-32 score: 112.0
None	No IPR available	PANTHER	PTHR33178:SF10	STRESS-RESPONSE A/B BARREL DOMAIN-CONTAINING PROTEIN HS1	coord: 1..108
IPR044662	Stress-response A/B barrel domain-containing protein HS1/DABB1-like	PANTHER	PTHR33178	FAMILY NOT NAMED	coord: 1..108
IPR011008	Dimeric alpha-beta barrel	SUPERFAMILY	54909	Dimeric alpha+beta barrel	coord: 8..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g11930.1	Cp4.1LG03g11930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009865	pollen tube adhesion