Cp4.1LG03g09430 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG03g09430
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionPentatricopeptide repeat-containing protein
LocationCp4.1LG03: 6939324 .. 6954895 (-)
RNA-Seq ExpressionCp4.1LG03g09430
SyntenyCp4.1LG03g09430
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTGTGCAGATATGGTGGACTACTAAAAGCGCAAGATTTGAATGTTATACTGCGGCATTTTGGGATGTCAAGTAGGTGGCAGGATCTATCTCAGGTGCTTCTAGAAATATTAATCTGCTTGTACTGTGTATTGTTGGATGAGAATCAAGCTGTTTCCGGTGAAATGTAGTGTCAACAAGAAAATTTCACAAATGCTCACAGTATTTCTTCTTGACTTGGGATCTCTTTTTTGTGATGTCATGATATATCAGAGAAAATATGTTTATACTCCTAATTGGGATTTGTTATCTTGTGCAGCTATTTTAACCTTTCAATTATCAATGAAAAGTTCTGTTTCCTTACAAGAAAGAAAGAATTCCTCATTTTTGTCAAAATATTTTTTGCTCATTTTCATCATTACATTTTTTGGTTGAGTTGAACCTGTTGCATACTTTTATTTGTTTCCATAACCCATGGGTTTGAGAACTTTCTAAATGCCTGTCATTTTACATTTGTTATCTATATTTGTGGTTATTGCAGCTCTTTGAGTGGATGCAGCAGACTGGAAAGACCAATGTTTCTTCTTACAGCAGCTATATAAAGTTCATGGGGAGAGGCCTTAATCCTTTGAAGGCACTAGAAATATACAATAATATTCAAGAAGTATCAATAAAGAATAATATTTATATTTGTAATTCTATCCTCAATTGTCTGGTGAGAAATGGCAAGTTTGATACCAGTGTTAAGCTGTTTCATCAAATGAAGAATGATGGTTTATGTCCAGATACAGTTACATACAGCACGGTATGACATTTTAGTTCATAGCATCATACCTAATTTGAAAATTGACCTACATTTTCTTTTATGTTGTATATTATTCTAAGCAGCTGTCAGATTTTTGTAGAAAACTTAGCCACTTTGTAAAAGCAATTATGTTTGAACTATTCAACCGAAAAAGAAAAGATTTTGAGGCCATTAATTTTTCCTGAGGAACATAAGAACAAGACAATGATCAAAATGTTGAATTGTGCTTCTCTTGGGTGCTTTCAGTTTTGGGTTTTTTTTTTGGAGTTATTCCTATAATGTTGTTAATTCCTGCAGGGGCCTTTCTTGTAATTTATTCAGTAACTTTGCTGGTTTTTAGTTGGTATTTTTCTGTTCTGATACTTTTCTATTTTCTGTATTTCTCTGTTATTTTGGGATAGGGGATTTCTCTAGCAGTGAACATCAGTAAGTCAATGTCGGTTTTGAGCACAAACTGACACCCATAACCGTCCTATCAATCTTGACCAGCCAGTGGTTGGCAGTTTTGAAATGCTTTATGAAACTGGTCGACTGACTGGATTGTTGGTTTTGGCCGAAACTGTTGAAAATAGAGTGAGAGAGCAACTGTAGCAGGGAGATGACCAAACTTTGACTTACTCCTGTGAACAAGCACTTGAAGGAGATAGATGAACATGCTTGATGTATAAGATAGAGATAGCCAGAATGTTAAGGGAGAAAAAGAGATAGAGAGGAATGTCCAGAGAAAAGAAGGGATAAAAAGAAAGTGAGAAGAGAGAAGGGGATAAGACTGAAGTCGGTGGGGGAGGAGAAGGGGAAAAAGAGAATGATAGAAAGGGAGACGGGAGAATGGGAGGAAGAAGAGAGAAAATATATATTTTTTTGAGAAACCATGGCTGGTTTCTTAAAACAGCCACAAAATTTTAAATACTGATCAATGAATATCAATTGGTCGGCTGAAAACTTATTCTTTGGCCACTTGGACAGACTGGCTAGTTGTTTTTTCATATAGAAAAGTTGATGCCAGCTGAACTTTGGTTACAGCAACCGACCAACGTCCGTTTGAGTTGCTGAATCAGTTTTTCGAAGTGGAGTGTGTACCCCTAGATTTTCTTTTATATTCTTGTAGGAAGTTTATATCTTTAAAAACTTATAACATTTCAATGCTTGATGGAAAATTTTGTTGCTTCTCCTCCAACGACAATCGTCCTTTGAAGGAGAAGGAAATCAATAATGGGAACAGTAATGGAGATAAATCCTGTAACAAAGGAAATTATTCTTAAAGGTAGAGCCAAGGAGCTTGATGCCAATGTCAAGCTCCGTAATGACAAAGGAAAAGGTGTGAACCTCAATAACATGAGTGATGAGGCTTATTTTTTATGTTTTATATTTATTTTTTAAGTGGATAGGTAATAAGCTTGAAGTGGGTGCTCTATATTTAATGGACATCATACACATACCCCAAAAGAAAGCCTATAGAGCTTTGGCTTCTCAATTTGGTGAGAAGGAGGATGCATGTGGTTCCATGCAATTTCTGAATGCCATAACTTTTTAGAACACCTAAAGCCAAAAAATGAGGGTATTGTTAGCTAATTCCGTAGTTTATGGTTTGTGTCCATGGTTCTACACATGACTTTTTTTCGTTAGTGGAAGTGACGTAATTGGGCATCACAACATTGATGGAAGGTGTCTATTAAGGCTATCAATTCTGTTGCCAAACGCATCCTTGGTCTTTCTCGTAATGTATAGATGAAGAATTTCTAGTGATGTTTGCTAAGGAATTCTAGATAGGTCCACTAACATCATGATGGATGATCATTAAGTTCGCAGCAGCAACTAAATCCCATTTCTTCTGATAACTAAATCCCATTTCTTCTGTCAGTGTATCAATGAAATGTTGCAAGTACTCTCTAAGTAGGCTATTAAATTTCCGTTTGAGCATTTCTTTGAGGTTGATAACTTAGAAGAAATATTAGTGTTTTGGTTAGACCAAAACAACTCAAACAACTCCATTTGAAAGGTGCTTGAGAATCTATTAGAATTGAAATTTATCGTAACTCTTAAAGTTAAATAGTTTGAGTTTAGTAGTGACTTAATATGCTATAAGAGTAGGAGGTCCTATTGTTCGAACTCCTATAATGTTCTTTATTTTTTCAATTAATATTTTTTGGGTCTTATGCTAATTTCCAAGTTTACTAGCAAAGAAGCACAAATACGGATTGACACACCACGAACATGGTGATACATATTTTTTTAAAAATGTATATTTTAAAAAATCTAGGACACGGACATGACAAGGACTTGTTTATTAAAATATACATTTTTATACAGGAAGAAATTCAAAGTCAATAAGTTTATGTATTTATGTGCTAAAAATGAGTATGATGTATTTCGCTTTCAATTTTTTTTCTTTTTTATTTTTCTATATTCTTATTTTTAGATTTAGTGTACTCAACAAGTATTCAATACCGGTCTAACAAATGTGGACCTATATTGATTTTGTACAACTAGTGTCTAACACATTTGTATTGTGCTAATAAGTGTTTGTCTATTTGATACGTGGCCAACAAGTATCAAAGTGTTTTCAGACATGAACACACTAACCAAACTAAAGTGTCCGTGCTTCTTGTCCACTAGTGAGGGAGAGTTTTAAGAGTATGAATATGGATTAAATATGCTATAAACCATCAACTTAAGCTTTTAGGTTTAATGATGATGTAACACGTATTGGAGTAGAAGTTGAGACCTATACAAGGAGTTTTTATTCTCCTCATTTCATCTAGAAATATAAGATGTATACTTCCTCTCTTTAGAAATAAAATGACTCATTTTTTCAAGCCTCCTGCGTTTCCTTAGTCACTCTGCCATTCAAAGTTAAGACCAATTTGAAGCTTCTATCCAAGAAGTATCCGATGGGACTTCATTCTTTTCACTGCCTCCCCTTGGAACTGTAGTTCAGAGTTATGTTTTGCTTTTGCTTTTGTTTTTGAATTTTGATGCGTCTTCTATTCTCCTAAACTGGAGGGCTTTCATGTAATCTCTCTGGATTTTTATTCATCCTTTTTTTGTCTATCAGTTAAATTGTTTCTTATATAAAACAAATGCTATTGACAGTTCTTTGCTAGTAATGATATTAATTTTTTTTCTAGCATGGCCATTACAGTAAAAGAAATTGTGTTGCTTTGTCAGTTGCTCAATTTGTGTAGACATCTATCATATTTCAACGATGTATATATTTAGTTCCGTGACTTACTACTATGTCATAAAAGTTGCAACGATATTGTGATAGGCCTCCTATTAGAAATGCATCTTAAAGCAAGCGTATGAGGAGAGCAGAGGGGGTTTGGGAATGTAATTAGTTGGTAAGGGGGTACTTATGTGATTAGATATCCAGTTGTCTTGGCAGTCTTGACCCATTCTATGATTCTTCCCTAGGTTGTTGCCATTCTTGACAAATAATATTGAGAGCATTTCACATTGTGGAGAAAGAATAAGTGATTTTTAATTGTTACTGTAACTAAAATGTGTTGTAAAGATTTCATTCTCGAATTTTATACTGAATTGTATGGTATTCTTTGTGGTGTTGAATTGTCCTTGTTTTTTAGTATTATTTTCTCGTTCTAACAAAGTCTGCTGTATTATCCTTTATTTAAAGGATATATTTACGCCAAGAATTTTGTGATGTTATTATTAACAGGAATCTCGATCTGTTCATGAGTGGAATGTGGGGCTAGATACACTTTTAATTGATATGTTTTATTGTTAAAATGATGAAAAATAAAAATTTTCGTCTTGTCTACTTTCAACAGATGCTTACTGGTTGTATCAAGGTTGAACATGGTTATGCCAAAGCATTGGAGCTTCTAAAGGAGTCGCAAAACAATGGACTATGCATGGATTCTGTGTCGTATGGGACACTGATAGCTGTTTGTGCTTCACATAATAGATTGGAAGACGCAGAGAGTTTCTTCAACCAGATGAAAAATGAAGGCTATTCGCCAAATATGTTCCATTATGGCTCTCTACTCAATGCTTATTCAATGAGTGGAGATTATAAAAAGGCTGATGAGCTGATCGAGGATATGAAATTGAAGGGGTTAGTACCAAATAAGGTTTGTTTTTTTGTTATGGTGCCTTCGAAACTTTAGATTGTATTTATATATGAATAATTTTTATGAGAAGAATCGAGAAGAAAGCATAGTAATTTGTTCGGGAAATATACGAAGTTATATGGTTAAAGTCCTATTATTGTAAAAGAATGAGTTGTAAAGACTTCCATGGAGTTGTAAAGACTACAGAAAAGAGTGGGAAGAAATTGCCTAGCGAGAGGAAGTTCACCATGGATTTAATAGATAAAGTGCCATCATTTTCGAGGTTCCAATATAGTTGGTCTGATAGGATGCGGACGCCTTTCCTCAAAAGGTTAACAGCAAAAGCATTCTAGTCTTCTGCATCTCTATCCTTGAGAGCACCCGATGGAGAGGGCCCAAATGCTCCCCACTAGTGATCGTATTCATTCTACCATTGTTGGTGGAAAGCACACAGAGTCTGGATATTTGAGTTTGAGGTAGCGTGGACCTAACCTGTCATCATATTAGAAGAGAGAGCTGGAGCAATCATCAATTTTAATCGAAATGTTAGCATGCAGTATTTCTGGGTACAAATAGTTATATACTTGTTTGTTAAAATTATTTCAATATGCCATGGAAGACAACTCTACAGTTATAAGATATTTGACTTGATGGCACAAGTATTGAAATCAATGTTTAAGTACATCTGAATGTGTTTATTTACATCATACCGGTCCATGTTACTCTGGAGAATCTGGAAATCATTAACTTTTCCCTCAAAAAGTTTAAGGTTAGGCTTCAAAAGTACATGTGAGAGAAGTTATAAAAACGTGGTTAAAAAATACGACTGTAGTTTCTCTGGCTTATTTAGAAATATATATATATTCTTTTTTTTTAATACTTACAATGGAATTTTTCTTTCATTTCTAAAAAATTGTATACGGTTGGTATTCAAGTTTTCTGTCTACTTGCAGGTGATTTTAACAACATTGCTGAAGGTTTATGTCAGGGGAGGTTTGTTTGAGAAATCAAGGAAACTCTTATCAGAACTGGAAGCCCTTGGCTATGGTGAAAATGAGGTCTGTGCCAATGATTTGTGGTAGTATTACTTTTTGTACATTTGAAGCTGATGTTTGCTAATTACCATTTGTTTATATGATTCTTTCCACACTAGAAAGATGGTCATATTGTTGGTTTTGATGTTTGTACTTTCCAAAATGATTAAATTACAAGTTTAGTCTATAAACCGTGAAGTTTGTGTCTATTTGACATTTGAACTTTCAAAAGTGTTTAATAGGTCCCTAATTTTTCAATTTTGTGTCTAATAGGTCCTTGAACTTTCAATTTTGTACCTAGTAGATCTGTGAATTTAAAAAAATATCGGGAGAGACTAAACTGTATTTCTAAAAGTTAGGGATCAACTATACACAAACTTCAAAGTTTAAGTACTAAATTTAAATTTAATGTTTCAAAATTTGTTAATTTCTAGTTTGGTAGTTCCATTGGGTCGAGTAATTGGTAGGGCTTAAGAAGTGAATACGATGAAGGATGCAAAGGTTTCATGACATTGACTTGGAAGATCACTACTTGGATGCCGTTCTTCTCTGGTTATATTTTTTTTCCCCCGCCAATAGGAGTTGATGAAGCTGAGCTATTGAGCTATTGCCCAAAGAATTGAGACACATTTAAAGAAGAAAGTAGATTGATTGAAGAGCTTGGGTAAAAAAAAAGTGTAATCAAATTGGAGCGAACCCAATTCTTAGGGTGTTCCATGAATTTTTTGAAATTGGCATTCTGAACCGGGGCATCGATGAAACCTATGTTTGTCTTGTTCCTACAAAGGCGTGCTTCTTAAGTAACTGACTTCAGACTAATCAGTTTGATCACTATTCTCTACAAGCTTATTGCCAAAGTTTTAGCTAAGAGGCTTAAAAAAGTTGTCTATCAAAGAATCAGCTGCATCCAATCAGCTTTTATCACAGGTAGACAAATCCTTTGACCCTATTTTGATTGCCAATGAATTGCTTGATGACTTTGTTGCTAGCCTTCAGGATGGTTGTGTTTTCAAGCTTGATTTTGAGAAGGCTTATGACATGGTTGACTGGGACTTTCTCCTTCAGGTGCTTAAGTGTAAAGACTTTGGAGCTCGCTGGATTGGCTAGATTAAAGCGTGTATTACCAATACCTCCTTCTCCGTTCTGGTTAATGGAAGCCCGATGGGCCAAATTTGAGCTACTAGGAGGCTAAGGCAAGGTGGTCTGCTTGCTCCTTTTCTATTTTTGTTGGTCGCGGATGTCTTTAGTACATTGATTGACAAAGCGGGTGAAGGATGATTTTCTGAAGGTCTATCCATCATAGGTGAACGGGTTCATATTTAACGCTTGCAATTTGCTGATACGTTGCTTTTCCCTGACCACATTATTCCGTAATGAGAGGTTTGGGTATTGGTAATCTTGTTACTAAAGTCGAGCTCTCTTAGCTAAATGGGGCTGGAGATCTTTAACAAAAAAAGAAAACTTTGTGGACATAGGTGATTGCTTCTAAATACAAATGGAATGTGAATCAATGGTGGCCATGTATGAAAGGCTCTTGGTCGTTTAAAGGCCCATGGCCCGAAATCATGAACAGTATTCTCCTATCTGAGGAGTGGTAGAAAATTCGAATGGGTCAAGGGGATAAGACCTGATTTTGGAAGGATAAATTGCTAATGGATTCGCTCCTTTGTGTGGAGTTCCCTAGACTGTTTAGAATTGTGGTTACCAAGGACTCGATCATTAGCCAATTCTGGTTTGATAGTGTGGATGCTGGAAAATGATGGCTCCTTTTCGGTTAGATCCTTTCTGGGCTTATTGTGAAGCAAGCAATTTGGTCTAACAAAAATCTGATCTTATATGAAAATCATTGTGTCCTAAAAAAGGTCAAAGTTTTCTTGTAGATTTTTTCTTTTGAGAGGTTGAATTGCTGCAGAATCTATAGAATTCTTCAAAATTCCGCACTTTCCTCTGATTGGTGCGTTCTTTCTAAAAGAAGTGAGGAATATTTGATGCACCTCTTCTTCTTCTGCCCTTTGCTGCTGTTTACTGGGAAAGGTTGTTATATTTGTTCAATTTGCAATGTGTTGGCCCAACAAGGGTTCGGATGCCATTCTTCATCTTATTGATGGCCCTCAGGTGAAAATCCTGTGGTCCAATGGTGTCTTTGCCCTCCTTTGAAGACTACGGTTTGAAAGAGACTTTGGTTACTCCTTTTTTTATTTCTACTTGGTCTTCTACTTCTGAAGTTCTTTTGTAACTACATGACTCATGTTTACACCAGTTGATTTGTGTGGATATCTCATCTCCTTTTCCTTTATAATTCCTCTCTTGATAATGAAAGTTATGTTTCTTATAAAAGCAAAAAAGAAAAACTAGAATCCTTACATGTGTTCAACCAGTAGGAAATACTTCAGATATGGACAAAGTGGGCATTATCAAGCAAATACCTCCTTAGATTGCATTTGCGACTAACAAATAGTGATAGCGTTGTACAAGTATTCAGTAAGCAAGAGAAACTTTATGAGGAAGTTGTTGAAGTGAACAAGTTATCTGTGATGCCTAGGTTCAGAATTTTGACCAAGATTCAAAATTCGGATTCAGTACCTGATGGTACTTGTCAATAAGGTTAGGTTCTCCTTGCTGGACATTTGTAATTCCTTGCCTCGGACTTTCATGTAGCCAACATATGTGCTAGTTTTGAGGTGATCTCATCCATTGGAACTACTATCTATGCACGTTTCAGGTTATTGTATATATGGGCCTAGGTAGTGATAAGAGCTGAGGTATGAGCTGTTTTTCTATGAAAAGCACCTGCACAACTACAATTGCCTTACCTAGATGGTACAAAATCCTGCAGTCATAATCTTTCACGAACTCAAGTCACCTTCGTTGTCTCGGTATGAGCTGTTCATAATGTATTTCAAGCATGTTTTTTTTTTAACAAGAAACAACTTTTCTTTGATAGATGAAAAGAAAATTGTTCAAAGATACAAGCTTCTTGAAGGGAATGAAAACGAAAACAAAGAGAACAAAGAGAATCAAGTACAGAAGAACAGAAAACTTAAAAATCACAAAGTTAAAGGCTTTCAATTTGAAGTGGACTTAAAGGAGCGAGACGGGGTTTTTCAAGACTTTTGCAAGAAGTTTGCCTCTAATTTTTCAATGATGGATGCATGAGTTTCAAATAACTTCAACTTGTAATGGAGATGAATCTCTAAAGTCCTTTTAATGTAAGACTCTCTACAATAAATCGTCTCATTACAAAGAAAAGCCAATTCCACGTGCCGAAAGTTGAGCAATATCAACATCTTTAGACTCCATAAGATTAGCAAATAAGGTTGATGCACGAAGGAAACCTGAGAAAAGATCTTTAAAAAATGGCAATCAGTGCAACCAATGGAAGAATAAATAGGATAAAGACAATCTTCTTCCTCCAGCAAAATTTCGAGGAGCAAATGAAAAAACTACTTTCAAGAAACAACTTTTGAAATTCCAAAGGTTCGGGAGTGTGCTTCAAATGCGGGGAGGGACATGTGGCTGCCAACTGTTACAATGATAATGCCCCTGATGCAAGACAGTCCTTAAATTCCAACCAGGCAAATGCAAGCAGACTAAACAGATAGGTAAGGTGATTTCCATCATTCGTTTGTCGGTAGATAACTTAAATGTCGTAGTGATAGGTACGTTACCCATTATTGGTCACTATGCAATAGTATTATTTAATTTAGGCTATACTCATTCGTTTATATCTGCCTCCTTTTCAAGTCGAGCTAAGTTAGAATTGGAATTATTAGGATATGTTTTGTCTATTTCCACCCGATCAAGGTTGATTTTGTTTGCTAATGAGAAAGTAAAAGTCTGTTAGGTGTTAGTATCATATAATTTGTTGGATATGATATACTGATAGTCTTGGACATGATATACTGTTATCATTGGTATGGAATGGTTAGCTGAAAATCATGACAACATTGATTGTTATCTCAAGGAAGTGTGTTCAGAAAACCATCGAGAAACAAACTTCAAGTTCAAAGGATCCCGAACCGAAATCATTTCTAAAATGGTCTTTCCGTTAAAGGCGAAAGGGTTGATCAAGCCAACAAGCATGGGCCCTTTTGGCTAGTGCGGTTGACACAAGATTTACGGAGGTCGTTGTGGCTTTGGGATTAGAAGTTAATGAGTTCATAGACATGTTCCCTAAAAACCTCCGAGGATTGTCACCAAAATGGGAGATAGATTTAGGAACAACTTTCCTTTCTAAGGCTCCATATAGAATGACTCCAACAGAGATGAAGAGCTAAGTTACAGATCCAGGAACTACTGGACGAGGCTTCATGCACGCTAATGTAATTTCTTGGGGCACACTAATTTTGTTTGTGAAGAAAAAAGATGGATCCATGCATCTTTGTATAGACTATTGTGAGTTGAACATGGTAACAATAAAGAACAAGTACCCTCTACCTTAGTTACAAGGAGCAATGGTGTTTTTCAAGATCGACCTGCGATCAGCCTATCACCCGTTGAGAACAAGGGGTGATGATATCCCTAAAACAACTTTAAGCTCTTGGTATGAGATTGCGAATTTACTATAATATCCTTAGGCTTGATCAATGCGCCAAAATTTTCTAGACACCTTCGTAATTGCATTTATTGATAATGTTAGTGAGTTGTGTAGTTTCCTGGAGTTGGTTGCCCGGTGAAAGATTATGAGCGTAATTATTTGATCTAGATTTGGACTTAGTAGTTATGGTCATTGCCTTGGAGATTTAAAGACGTTATCTATATAGAGAGAAAATTCAAATTTTCACGAACTATAAAGCTCGAACTACTTTTTCACTTGGAAAAAATTATAAACATGAGTCGAAGAACTTTAAATGCCCAACAATGAGATCCTAACCTCGTCGACAAGTTTTGTCGAGTGTCAAATCTTGATTCTTAATCATGGTTCGAACCTTAGGCCAGATGATATCAATACGGAACATCTTCTAGTGGACATATGACACTCAAGTAAAGGAGGGGTACATGAATAAACCGATACCACATCCAAACAACGACATGATGATATTCCAGTATGGTTAAGAAAAGCTTAAAAGAATTGATAGTTACTACCTATACCAATAAGGTACATCATTTCTATTCAAGGACTCAATCATAAAATCTCCAAAGTTAAGAATGCTTGGTTTGGAACAATCCTATGTTGGGTGACTTCTTGAGATTTTCTAAGCATACTAAAAGGACCCAACTAACTTGTTGGGATTTTCTAAGTATACTAAAAGGACCCGACTTGTGTTGGTTTGTAGGGACACTCGCGAAGGATTCTTGAACCAGATTTAGAATCGTAGGCCTAGGCATTTATCAATGTACAATACGCCTTAGATTTTAGATCCCAAGGCCTCGATATGGACTCGCCCCCATCATGATTGAAAACTCTATTTTTCTTAATGTATCCTTGGTCTGGAATTTGGAGTATTTTATGTACTTTTTTTGGGTTATTTGTTGTGGTGCTTCTTATCAGAAGTTGGTTTGGTTTTTGTGTGGCAGTTCACTTTATTCTCTTTCCAAGGAGCTCTTTGTAACTCATGCATGTAGCTTTTCATAACTTCACAAAATAATATTGTTTCCTTGGAAAAAAAAAAAAAAAAAAAAAAAAAAACACACACAACACTTGGGAGGATTTTTGTACGGATAGCTTTTTAGAAACATTAATTCCATCAAAGGACTTAATTCTGTTCTTAAAAATCTTAAATATTTCAAGTTTCATTCTTCCAGCATAAAGTTCCGAATCTAAAAATTTAATCTTTTTTTTTTTGTAGATGCCATATTGTTTGTTGATGGATGGGCTGGCCAAGGCAGGTGCTATTAGAGAAGCAAAGGCAGTTTTTGATCAAATGAAAGAAAAAAACGTTAAATCTGGTATGTTTTCTCCTTTTTAGATTTGAAGTTATAAACCGCAACTAAAATGTAGTATGAACTCATTCCTATCTATGTTTCTGCGTTTTCCTTTTCTACATGTTGCCGTTGAGTCTTTGTAGGGGTCAAGCCCCTCCAGAATTTTATCAATACCCTTGTAAGGCTAAATACTTCATAAATAGTATTTACACAAAATCATTCATAAGTAGTCTAATTCCAACCTGTTGAATTACTTTTGTGGAAGTCATTTTTTTAGTACTTCAACAATTTATTCTATCATGAGCTATAGTGTAACGGCCCAAGCCCACCGCTAGCACATATTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTCCCCTCAAGGTTTTTAAAACGCGTCTGCTAGAGAGAGGTTTTCACACCCTTATAAAAGTGTTTCGTTCTCCTCCCCAACCGATGTGGGATCTAACAATCCACCCCCCTTCATGGCCCAGCGTTCTCGTTGGCACTTGTTCATTTCTCCAATCGATGTGGGACCCCCGCCAAGTCCTCCCCCCCCCCTTCGAGGCCTAGCCTCCTTGCTGGCACATCGCCCTGTGTCTAGCTCTGATACCATTTGTAACGGCTCAAGCCCACCGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTCCCCTCAAAGTTTTTAAAACGTGTCTACTAGGGAGAGAGGTTTCCACACCCTTATAAAGGGCGTTTTGTTCTCCTTTCCAACCAATGTGGGATCTAACATATAGAGATAACACCTTTATTTTCACATTAATTTCGTATCGGTGTCTTCAAAGGAATCTTCACTTCTTTAAGTATCCTTTTGCCCAATATGCATCATTATAGACTTCTAGTTGGAAGTGATTATGCTATGCCTTTGGAATAAAATAGCTTTTTCAAGTTGTATTCGAGATTTTCACCGCGTTTATAGAATATAGTATGATTTGCTTGACTCTGAAGAAATACATGATTGGACACAATCTTTAATGCTCAAACCAAGCTCTTGGAGATTGTTAAGATCCTATTTCCTTTCTAAAAACCAAGTGGTAGGCTCATAAATACCTCTTCCTCAAGATTTTCATTTCCAAAGACATTTTTTAAGTCAAGTTGGTCGAATGGGAATCTGAATTAACTACAAGGGACAAACGAACTCTAATGTGGTTTATTTTAGCAACATGAGCAAATGTTTATTGATAATTTGAATAGTTGAAGAAGTAGGAACGACGGAAGGATTACTAGGGTCGAAGTCTCACATTGGCTCTCTAAAGAATCAAGTGTCGGTTCATGGTTCTTTGAATGAATTTTTTTTTCTAGTATAAAACTTAAACTCAAGAACTTGGTTGGTAGGATCATTTTGTAATATTTCTCCTCCTAATCGAGAAGTTTCTATACTTGGCATCAACCTTTTTTACTTGAACAGTCACTCGAAAATGCATTTAACAACTCGATGATCAAGATCATACCAAAAGTGACGAAGTATGTGAACATGAGTAGTACACCCAAAAACTACTACTTACATTCTTTTTTTCTAAACTGCAATACGAAGGAGAGTATGAGTCAAACATATGAGACGAACTTGTGATGTGATCAGAAGCTCCAGAATCAATAATCGACGGAGACGAATTACTACAAGAGAAGGCCTTAGGATAAATACTCTTTGTGCCAAAGATACACATGAATTGAACCAAAAAACTAATCTGAACCAACCAGACTTGAACGGAACCAAACTAGCCAGACTTGAACCAAACCAGACCTGATTTGAAAGGACAGGACAACCACGAACAATCGAGCAAAAGTATTTCAAACCCATGGATAATGCAGAGACGTTGAATGCATGCAACAGGTGCAGGACAGAGGCAACGAATGAAGCAACAGTACTGCAGAGATGCAACAATAGCAAACTAGGCCACAATGAAAAGACCAACGGTTCTGAATGGCCACCGCAGAAAAAAGAACAACCGACCCTACAAATGCGAACCTGCTACCAAAGAGATATTGCCGAAGGTCGAATGTGCCATTTTGATTGGCGGTAGGGTTCAGACAGTAGTGGTAGCTAGGTGACAGCTAGGATTAGAAAGTGGCTAGGGGTTTTGGAGGCCACCATGAATTATAGTGCTCTGATGCCATCTTAATTTTAAGAGAATATCAATATCCTTGTTATTCAATATGTGCAATTCAGGTTTTCTTATATAGTAGAAATTCCAACTTCTTTTCTTATGCTTTTTACGTCTCACAGATGGGTATGCCCACAGCATCATGATATCAGCTTTTTGCCGAGGTGGGCTTCTAGAAGAGGCAAAACAGTTGGCTAAGGATTTTGAAACCACATATGACAGATATGACATTGTATTATTGAATACAATGCTCTGTGCGTACTGCAGAGCAGGAGAAATGGAGAGTGTCATGCAAATGCTTAGGAAAATGGATGAATTAGCAATCAGTCCAGATTATAATACGTTTCATATCTTAATCAAATATTTCTGTAAGGAGAAACTATATCTACTTGGCTGTAGGACCTTGGAGGACATGCATCGTCAAGGCCACCAACCAGATGAGGTCAAGTTTTGTTATTTTCTATCAATTAATATACACTTATAAATGTTTTGGTCCCCTGAAGAAACATGTTGTGTGTTGTATTTTCCTAACTGATATGCCACAGAACCCGAACTTTATCCATACAGAGTTTAGGAATTTTCAATATAAAGTAGGATCAATGGAGTTGTTTAACGTTAGTTTTAAGCGTGGGAGATCGCACGTTTCGTTTCTACATTTCAAGTTCACATTGGAAAAACTGTACTAGATTTTCTTGATCTGAATTGGTTTGCTCACTCCAAATGCAACATTGTGCAGGAACTCTGTTCATCTTTAATATCATCTCTAGGGACGATACGGGCTTATTCCGAAGCATTTTCGGTTTACAATATATTGAAATATAGTAAAAGAACAATGTGCAAGGCACTCCATGAAAAGATTTTGCATATTCTAATTGCAGGTCGACTTCTCAAAGATGCTTATGTCGTTGTCAAGGTATTTATAATAATTATTTATTTATCCATATTTAATTTTCAACTCTATACTTCGTTATCACTATGCTCAAAATTTTGTTTCCTTTTAGGACAATGCAGGACTGATTTCTAAACCTGCCATAAGGAAGTTCGCTTTCAAATTCATGAAGTTCGGTAACGTCAACTTGATAAATGACGTAATGAAGGCAATCCATTGTTCTGGATATAAGATTGATCAGGTGAATTATTAATGGACATACATAAAACATGTTCATGAATTTAGATTCAACCAGTAACTACTACTAGTTTTATGAAGTTGCTTCTTTTTCTTCCTCAGGATTTATTTATGATGGCTACATCACGTTTCATTGAGCTGCCTGAAAAGAAGGATTTGTTTATTCAATTGCTACAATGGATGTCTGGTCAGGGTTATGTCGTTGACTCATCAACGAGAAACCTTATCTTAAAGAACTCACATTTATTTGGTCGCCAGCTTATTGCCGACATTCTGTCAAAGCAGCAGCATCGAGTGTCCAAAGCTACAAGATCTCATGGGAACACTTGAAGGAGATAATTGATCTTGTGTTGACATTAGATTTTTGGGTTGGATAGTGTGGAGATCAAAGATAGGGTTGTTTGTTAGTATGACTGGTAAACCCTTACATTTATTCAATATATGCTGTGTGTTTATTATGATGTTGGAGACTGGAGCTTTCTTATTGAAATTTCATCAGTATGTGTAAACGGCCCAAGCCCACTGCTAGTAGATATTGTCCTCTTTAG

mRNA sequence

TCTTGTGCAGATATGGTGGACTACTAAAAGCGCAAGATTTGAATGTTATACTGCGGCATTTTGGGATGTCAAGTAGGTGGCAGGATCTATCTCAGCTCTTTGAGTGGATGCAGCAGACTGGAAAGACCAATGTTTCTTCTTACAGCAGCTATATAAAGTTCATGGGGAGAGGCCTTAATCCTTTGAAGGCACTAGAAATATACAATAATATTCAAGAAGTATCAATAAAGAATAATATTTATATTTGTAATTCTATCCTCAATTGTCTGGTGAGAAATGGCAAGTTTGATACCAGTGTTAAGCTGTTTCATCAAATGAAGAATGATGGTTTATGTCCAGATACAGTTACATACAGCACGATGCTTACTGGTTGTATCAAGGTTGAACATGGTTATGCCAAAGCATTGGAGCTTCTAAAGGAGTCGCAAAACAATGGACTATGCATGGATTCTGTGTCGTATGGGACACTGATAGCTGTTTGTGCTTCACATAATAGATTGGAAGACGCAGAGAGTTTCTTCAACCAGATGAAAAATGAAGGCTATTCGCCAAATATGTTCCATTATGGCTCTCTACTCAATGCTTATTCAATGAGTGGAGATTATAAAAAGGCTGATGAGCTGATCGAGGATATGAAATTGAAGGGGTTAGTACCAAATAAGGTGATTTTAACAACATTGCTGAAGGTTTATGTCAGGGGAGGTTTGTTTGAGAAATCAAGGAAACTCTTATCAGAACTGGAAGCCCTTGGCTATGGTGAAAATGAGATGCCATATTGTTTGTTGATGGATGGGCTGGCCAAGGCAGGTGCTATTAGAGAAGCAAAGGCAGTTTTTGATCAAATGAAAGAAAAAAACGTTAAATCTGATGGGTATGCCCACAGCATCATGATATCAGCTTTTTGCCGAGGTGGGCTTCTAGAAGAGGCAAAACAGTTGGCTAAGGATTTTGAAACCACATATGACAGATATGACATTGTATTATTGAATACAATGCTCTGTGCGTACTGCAGAGCAGGAGAAATGGAGAGTGTCATGCAAATGCTTAGGAAAATGGATGAATTAGCAATCAGTCCAGATTATAATACGTTTCATATCTTAATCAAATATTTCTGTAAGGAGAAACTATATCTACTTGGCTGTAGGACCTTGGAGGACATGCATCGTCAAGGCCACCAACCAGATGAGGAACTCTGTTCATCTTTAATATCATCTCTAGGGACGATACGGGCTTATTCCGAAGCATTTTCGGTTTACAATATATTGAAATATAGTAAAAGAACAATGTGCAAGGCACTCCATGAAAAGATTTTGCATATTCTAATTGCAGGTCGACTTCTCAAAGATGCTTATGTCGTTGTCAAGGACAATGCAGGACTGATTTCTAAACCTGCCATAAGGAAGTTCGCTTTCAAATTCATGAAGTTCGGTAACGTCAACTTGATAAATGACGTAATGAAGGCAATCCATTGTTCTGGATATAAGATTGATCAGGATTTATTTATGATGGCTACATCACGTTTCATTGAGCTGCCTGAAAAGAAGGATTTGTTTATTCAATTGCTACAATGGATGTCTGGTCAGGGTTATGTCGTTGACTCATCAACGAGAAACCTTATCTTAAAGAACTCACATTTATTTGGTCGCCAGCTTATTGCCGACATTCTGTCAAAGCAGCAGCATCGAGTGTCCAAAGCTACAAGATCTCATGGGAACACTTGAAGGAGATAATTGATCTTGTGTTGACATTAGATTTTTGGGTTGGATAGTGTGGAGATCAAAGATAGGGTTGTTTGTTAGTATGACTGGTAAACCCTTACATTTATTCAATATATGCTGTGTGTTTATTATGATGTTGGAGACTGGAGCTTTCTTATTGAAATTTCATCAGTATGTGTAAACGGCCCAAGCCCACTGCTAGTAGATATTGTCCTCTTTAG

Coding sequence (CDS)

ATGTCAAGTAGGTGGCAGGATCTATCTCAGCTCTTTGAGTGGATGCAGCAGACTGGAAAGACCAATGTTTCTTCTTACAGCAGCTATATAAAGTTCATGGGGAGAGGCCTTAATCCTTTGAAGGCACTAGAAATATACAATAATATTCAAGAAGTATCAATAAAGAATAATATTTATATTTGTAATTCTATCCTCAATTGTCTGGTGAGAAATGGCAAGTTTGATACCAGTGTTAAGCTGTTTCATCAAATGAAGAATGATGGTTTATGTCCAGATACAGTTACATACAGCACGATGCTTACTGGTTGTATCAAGGTTGAACATGGTTATGCCAAAGCATTGGAGCTTCTAAAGGAGTCGCAAAACAATGGACTATGCATGGATTCTGTGTCGTATGGGACACTGATAGCTGTTTGTGCTTCACATAATAGATTGGAAGACGCAGAGAGTTTCTTCAACCAGATGAAAAATGAAGGCTATTCGCCAAATATGTTCCATTATGGCTCTCTACTCAATGCTTATTCAATGAGTGGAGATTATAAAAAGGCTGATGAGCTGATCGAGGATATGAAATTGAAGGGGTTAGTACCAAATAAGGTGATTTTAACAACATTGCTGAAGGTTTATGTCAGGGGAGGTTTGTTTGAGAAATCAAGGAAACTCTTATCAGAACTGGAAGCCCTTGGCTATGGTGAAAATGAGATGCCATATTGTTTGTTGATGGATGGGCTGGCCAAGGCAGGTGCTATTAGAGAAGCAAAGGCAGTTTTTGATCAAATGAAAGAAAAAAACGTTAAATCTGATGGGTATGCCCACAGCATCATGATATCAGCTTTTTGCCGAGGTGGGCTTCTAGAAGAGGCAAAACAGTTGGCTAAGGATTTTGAAACCACATATGACAGATATGACATTGTATTATTGAATACAATGCTCTGTGCGTACTGCAGAGCAGGAGAAATGGAGAGTGTCATGCAAATGCTTAGGAAAATGGATGAATTAGCAATCAGTCCAGATTATAATACGTTTCATATCTTAATCAAATATTTCTGTAAGGAGAAACTATATCTACTTGGCTGTAGGACCTTGGAGGACATGCATCGTCAAGGCCACCAACCAGATGAGGAACTCTGTTCATCTTTAATATCATCTCTAGGGACGATACGGGCTTATTCCGAAGCATTTTCGGTTTACAATATATTGAAATATAGTAAAAGAACAATGTGCAAGGCACTCCATGAAAAGATTTTGCATATTCTAATTGCAGGTCGACTTCTCAAAGATGCTTATGTCGTTGTCAAGGACAATGCAGGACTGATTTCTAAACCTGCCATAAGGAAGTTCGCTTTCAAATTCATGAAGTTCGGTAACGTCAACTTGATAAATGACGTAATGAAGGCAATCCATTGTTCTGGATATAAGATTGATCAGGATTTATTTATGATGGCTACATCACGTTTCATTGAGCTGCCTGAAAAGAAGGATTTGTTTATTCAATTGCTACAATGGATGTCTGGTCAGGGTTATGTCGTTGACTCATCAACGAGAAACCTTATCTTAAAGAACTCACATTTATTTGGTCGCCAGCTTATTGCCGACATTCTGTCAAAGCAGCAGCATCGAGTGTCCAAAGCTACAAGATCTCATGGGAACACTTGA

Protein sequence

MSSRWQDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSIKNNIYICNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEHGYAKALELLKESQNNGLCMDSVSYGTLIAVCASHNRLEDAESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDYKKADELIEDMKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEMPYCLLMDGLAKAGAIREAKAVFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVLLNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCKEKLYLLGCRTLEDMHRQGHQPDEELCSSLISSLGTIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKAIHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQQHRVSKATRSHGNT
Homology
BLAST of Cp4.1LG03g09430 vs. ExPASy Swiss-Prot
Match: Q0WVV0 (Pentatricopeptide repeat-containing protein At1g10910, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g10910 PE=2 SV=1)

HSP 1 Score: 751.9 bits (1940), Expect = 5.1e-216
Identity = 365/536 (68.10%), Postives = 450/536 (83.96%), Query Frame = 0

Query: 1   MSSRWQDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSIKNNIYI 60
           +S RWQDL QLFEWMQQ GK +VS+YSS IKF+G   N  KALEIY +I + S K N+YI
Sbjct: 110 ISGRWQDLIQLFEWMQQHGKISVSTYSSCIKFVG-AKNVSKALEIYQSIPDESTKINVYI 169

Query: 61  CNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEHGYAKALELLKES 120
           CNSIL+CLV+NGK D+ +KLF QMK DGL PD VTY+T+L GCIKV++GY KA+EL+ E 
Sbjct: 170 CNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGEL 229

Query: 121 QNNGLCMDSVSYGTLIAVCASHNRLEDAESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDY 180
            +NG+ MDSV YGT++A+CAS+ R E+AE+F  QMK EG+SPN++HY SLLN+YS  GDY
Sbjct: 230 PHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDY 289

Query: 181 KKADELIEDMKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEMPYCLL 240
           KKADEL+ +MK  GLVPNKV++TTLLKVY++GGLF++SR+LLSELE+ GY ENEMPYC+L
Sbjct: 290 KKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCML 349

Query: 241 MDGLAKAGAIREAKAVFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYD 300
           MDGL+KAG + EA+++FD MK K V+SDGYA+SIMISA CR    +EAK+L++D ETTY+
Sbjct: 350 MDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYE 409

Query: 301 RYDIVLLNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCKEKLYLLGCR 360
           + D+V+LNTMLCAYCRAGEMESVM+M++KMDE A+SPDYNTFHILIKYF KEKL+LL  +
Sbjct: 410 KCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQ 469

Query: 361 TLEDMHRQGHQPDEELCSSLISSLGTIRAYSEAFSVYNILKYSKRTMCKALHEKILHILI 420
           T  DMH +GH+ +EELCSSLI  LG IRA +EAFSVYN+L+YSKRT+CK LHEKILHILI
Sbjct: 470 TTLDMHSKGHRLEEELCSSLIYHLGKIRAQAEAFSVYNMLRYSKRTICKELHEKILHILI 529

Query: 421 AGRLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKAIHCSGYKIDQDLFM 480
            G LLKDAY+VVKDNA +IS+P ++KF   FM  GN+NL+NDV+K +H SG+KIDQ  F 
Sbjct: 530 QGNLLKDAYIVVKDNAKMISQPTLKKFGRAFMISGNINLVNDVLKVLHGSGHKIDQVQFE 589

Query: 481 MATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSK 537
           +A SR+I  P+KK+L +QLLQWM GQGYVVDSSTRNLILKNSH+FGR LIA+ILSK
Sbjct: 590 IAISRYISQPDKKELLLQLLQWMPGQGYVVDSSTRNLILKNSHMFGRLLIAEILSK 644

BLAST of Cp4.1LG03g09430 vs. ExPASy Swiss-Prot
Match: Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 7.7e-39
Identity = 91/323 (28.17%), Postives = 169/323 (52.32%), Query Frame = 0

Query: 62  NSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEHGYAKALELLKESQ 121
           NS++    + G    ++++ H M+N G  P+  +Y+ ++ G  K+     +A  +L E  
Sbjct: 393 NSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGK-IDEAYNVLNEMS 452

Query: 122 NNGLCMDSVSYGTLIAVCASHNRLEDAESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDYK 181
            +GL  ++V +  LI+     +R+ +A   F +M  +G  P+++ + SL++      + K
Sbjct: 453 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 512

Query: 182 KADELIEDMKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEMPYCLLM 241
            A  L+ DM  +G+V N V   TL+  ++R G  +++RKL++E+   G   +E+ Y  L+
Sbjct: 513 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 572

Query: 242 DGLAKAGAIREAKAVFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDR 301
            GL +AG + +A+++F++M          + +I+I+  CR G++EEA +  K+       
Sbjct: 573 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST 632

Query: 302 YDIVLLNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCKEKLYLLGCRT 361
            DIV  N+++   CRAG +E  + M RK+    I PD  TF+ L+ + CK       C  
Sbjct: 633 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLL 692

Query: 362 LEDMHRQGHQPDEELCSSLISSL 385
           L++    G  P+    S L+ S+
Sbjct: 693 LDEGIEDGFVPNHRTWSILLQSI 714

BLAST of Cp4.1LG03g09430 vs. ExPASy Swiss-Prot
Match: Q9S7Q2 (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC2 PE=2 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.5e-37
Identity = 97/381 (25.46%), Postives = 181/381 (47.51%), Query Frame = 0

Query: 5   WQDLSQLFEWMQQT--GKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSIKNNIYICN 64
           WQ   +LF++MQ+    K N   Y+  I  +GR     K LE+++ +    +  +++   
Sbjct: 121 WQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYT 180

Query: 65  SILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEHGYAKALELLKESQN 124
           +++N   RNG+++TS++L  +MKN+ + P  +TY+T++  C +    +   L L  E ++
Sbjct: 181 ALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRH 240

Query: 125 NGLCMDSVSYGTLIAVCASHNRLEDAESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDYKK 184
            G+  D V+Y TL++ CA     ++AE  F  M + G  P++  Y  L+  +      +K
Sbjct: 241 EGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEK 300

Query: 185 ADELIEDMKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEMPYCLLMD 244
             +L+ +M   G +P+      LL+ Y + G  +++  +  +++A G   N   Y +L++
Sbjct: 301 VCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLN 360

Query: 245 GLAKAGAIREAKAVFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRY 304
              ++G   + + +F +MK  N   D   ++I+I  F  GG  +E   L  D        
Sbjct: 361 LFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEP 420

Query: 305 DIVLLNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCKEKLYLLGCRTL 364
           D+     ++ A  + G  E   ++L+ M    I P    +  +I+ F +  LY       
Sbjct: 421 DMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAF 480

Query: 365 EDMHRQGHQPDEELCSSLISS 384
             MH  G  P  E   SL+ S
Sbjct: 481 NTMHEVGSNPSIETFHSLLYS 501

BLAST of Cp4.1LG03g09430 vs. ExPASy Swiss-Prot
Match: Q9FIT7 (Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g61990 PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 5.6e-37
Identity = 91/392 (23.21%), Postives = 196/392 (50.00%), Query Frame = 0

Query: 11  LFEWMQQTGK-TNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSIKNNIYICNSILNCLV 70
           LF+ M  +G      +Y+S I+   R  N  +  E+   +++ +I  + Y   +++  + 
Sbjct: 369 LFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMC 428

Query: 71  RNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEHGYAKALELLKESQNNGLCMDS 130
            +G  D +  +  +M   G  P+ V Y+T++   ++    +  A+ +LKE +  G+  D 
Sbjct: 429 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQ-NSRFGDAMRVLKEMKEQGIAPDI 488

Query: 131 VSYGTLIAVCASHNRLEDAESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDYKKADELIED 190
             Y +LI   +   R+++A SF  +M   G  PN F YG+ ++ Y  + ++  AD+ +++
Sbjct: 489 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 548

Query: 191 MKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEMPYCLLMDGLAKAGA 250
           M+  G++PNKV+ T L+  Y + G   ++      +   G   +   Y +LM+GL K   
Sbjct: 549 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 608

Query: 251 IREAKAVFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVLLNT 310
           + +A+ +F +M+ K +  D +++ ++I+ F + G +++A  +  +        ++++ N 
Sbjct: 609 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 668

Query: 311 MLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCKEKLYLLGCRTLEDMHRQG 370
           +L  +CR+GE+E   ++L +M    + P+  T+  +I  +CK        R  ++M  +G
Sbjct: 669 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 728

Query: 371 HQPDEELCSSLISSLGTIRAYSEAFSVYNILK 402
             PD  + ++L+     +     A +++   K
Sbjct: 729 LVPDSFVYTTLVDGCCRLNDVERAITIFGTNK 759

BLAST of Cp4.1LG03g09430 vs. ExPASy Swiss-Prot
Match: Q9SIC9 (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g31400 PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 4.7e-36
Identity = 90/342 (26.32%), Postives = 185/342 (54.09%), Query Frame = 0

Query: 10  QLFEWMQQTGKTN-VSSYSSYIKFMGRGLNPLKALEIYNNIQEVSIKNNIYICNSILNCL 69
           ++FE     G  N V ++S+ I   GR     +A+ ++N+++E  ++ N+   N++++  
Sbjct: 254 RIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDAC 313

Query: 70  VRNG-KFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEHGYAKALELLKESQNNGLCM 129
            + G +F    K F +M+ +G+ PD +T++++L  C +    +  A  L  E  N  +  
Sbjct: 314 GKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSR-GGLWEAARNLFDEMTNRRIEQ 373

Query: 130 DSVSYGTLIAVCASHNRLEDAESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDYKKADELI 189
           D  SY TL+       +++ A     QM  +   PN+  Y ++++ ++ +G + +A  L 
Sbjct: 374 DVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLF 433

Query: 190 EDMKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEMPYCLLMDGLAKA 249
            +M+  G+  ++V   TLL +Y + G  E++  +L E+ ++G  ++ + Y  L+ G  K 
Sbjct: 434 GEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQ 493

Query: 250 GAIREAKAVFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVLL 309
           G   E K VF +MK ++V  +   +S +I  + +GGL +EA ++ ++F++   R D+VL 
Sbjct: 494 GKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLY 553

Query: 310 NTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYF 350
           + ++ A C+ G + S + ++ +M +  ISP+  T++ +I  F
Sbjct: 554 SALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594

BLAST of Cp4.1LG03g09430 vs. NCBI nr
Match: XP_023528492.1 (pentatricopeptide repeat-containing protein At1g10910, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1099 bits (2843), Expect = 0.0
Identity = 551/551 (100.00%), Postives = 551/551 (100.00%), Query Frame = 0

Query: 1   MSSRWQDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSIKNNIYI 60
           MSSRWQDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSIKNNIYI
Sbjct: 115 MSSRWQDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSIKNNIYI 174

Query: 61  CNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEHGYAKALELLKES 120
           CNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEHGYAKALELLKES
Sbjct: 175 CNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEHGYAKALELLKES 234

Query: 121 QNNGLCMDSVSYGTLIAVCASHNRLEDAESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDY 180
           QNNGLCMDSVSYGTLIAVCASHNRLEDAESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDY
Sbjct: 235 QNNGLCMDSVSYGTLIAVCASHNRLEDAESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDY 294

Query: 181 KKADELIEDMKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEMPYCLL 240
           KKADELIEDMKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEMPYCLL
Sbjct: 295 KKADELIEDMKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEMPYCLL 354

Query: 241 MDGLAKAGAIREAKAVFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYD 300
           MDGLAKAGAIREAKAVFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYD
Sbjct: 355 MDGLAKAGAIREAKAVFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYD 414

Query: 301 RYDIVLLNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCKEKLYLLGCR 360
           RYDIVLLNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCKEKLYLLGCR
Sbjct: 415 RYDIVLLNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCKEKLYLLGCR 474

Query: 361 TLEDMHRQGHQPDEELCSSLISSLGTIRAYSEAFSVYNILKYSKRTMCKALHEKILHILI 420
           TLEDMHRQGHQPDEELCSSLISSLGTIRAYSEAFSVYNILKYSKRTMCKALHEKILHILI
Sbjct: 475 TLEDMHRQGHQPDEELCSSLISSLGTIRAYSEAFSVYNILKYSKRTMCKALHEKILHILI 534

Query: 421 AGRLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKAIHCSGYKIDQDLFM 480
           AGRLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKAIHCSGYKIDQDLFM
Sbjct: 535 AGRLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKAIHCSGYKIDQDLFM 594

Query: 481 MATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQQHR 540
           MATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQQHR
Sbjct: 595 MATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQQHR 654

Query: 541 VSKATRSHGNT 551
           VSKATRSHGNT
Sbjct: 655 VSKATRSHGNT 665

BLAST of Cp4.1LG03g09430 vs. NCBI nr
Match: XP_022930554.1 (pentatricopeptide repeat-containing protein At1g10910, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1087 bits (2811), Expect = 0.0
Identity = 546/551 (99.09%), Postives = 548/551 (99.46%), Query Frame = 0

Query: 1   MSSRWQDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSIKNNIYI 60
           MSSRWQDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSIKNNIYI
Sbjct: 115 MSSRWQDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSIKNNIYI 174

Query: 61  CNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEHGYAKALELLKES 120
           CNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEHGYAKALELLKES
Sbjct: 175 CNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEHGYAKALELLKES 234

Query: 121 QNNGLCMDSVSYGTLIAVCASHNRLEDAESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDY 180
           QNNGLCMDSVSYGTLIAVCASHNRLEDAESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDY
Sbjct: 235 QNNGLCMDSVSYGTLIAVCASHNRLEDAESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDY 294

Query: 181 KKADELIEDMKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEMPYCLL 240
           KKADELIEDMKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEMPYCLL
Sbjct: 295 KKADELIEDMKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEMPYCLL 354

Query: 241 MDGLAKAGAIREAKAVFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYD 300
           MDGL+KAGAIREAK VFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYD
Sbjct: 355 MDGLSKAGAIREAKTVFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYD 414

Query: 301 RYDIVLLNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCKEKLYLLGCR 360
           RYDIV+LNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCKEKLYLLGCR
Sbjct: 415 RYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCKEKLYLLGCR 474

Query: 361 TLEDMHRQGHQPDEELCSSLISSLGTIRAYSEAFSVYNILKYSKRTMCKALHEKILHILI 420
           TLEDMHRQGHQPDEELCS LISSLGTIRAYSEAFSVYNILKYSKRTMCKALHEKILHILI
Sbjct: 475 TLEDMHRQGHQPDEELCSYLISSLGTIRAYSEAFSVYNILKYSKRTMCKALHEKILHILI 534

Query: 421 AGRLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKAIHCSGYKIDQDLFM 480
           AGRLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKAIHCSGYKIDQDLFM
Sbjct: 535 AGRLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKAIHCSGYKIDQDLFM 594

Query: 481 MATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQQHR 540
           MATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQ HR
Sbjct: 595 MATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQ-HR 654

Query: 541 VSKATRSHGNT 551
           VSKATRSHGNT
Sbjct: 655 VSKATRSHGNT 664

BLAST of Cp4.1LG03g09430 vs. NCBI nr
Match: KAG7018152.1 (Pentatricopeptide repeat-containing protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1087 bits (2811), Expect = 0.0
Identity = 546/551 (99.09%), Postives = 549/551 (99.64%), Query Frame = 0

Query: 1   MSSRWQDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSIKNNIYI 60
           MSSRWQDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSIKNNIYI
Sbjct: 115 MSSRWQDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSIKNNIYI 174

Query: 61  CNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEHGYAKALELLKES 120
           CNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVE GYAKALELLKES
Sbjct: 175 CNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEDGYAKALELLKES 234

Query: 121 QNNGLCMDSVSYGTLIAVCASHNRLEDAESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDY 180
           QNNGLCMDSVSYGTLIAVCASHNRLEDAESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDY
Sbjct: 235 QNNGLCMDSVSYGTLIAVCASHNRLEDAESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDY 294

Query: 181 KKADELIEDMKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEMPYCLL 240
           KKADELIEDMKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEMPYCLL
Sbjct: 295 KKADELIEDMKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEMPYCLL 354

Query: 241 MDGLAKAGAIREAKAVFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYD 300
           MDGL+KAGAIREAKAVFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYD
Sbjct: 355 MDGLSKAGAIREAKAVFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYD 414

Query: 301 RYDIVLLNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCKEKLYLLGCR 360
           RYDIV+LNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCKEKLYLLGCR
Sbjct: 415 RYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCKEKLYLLGCR 474

Query: 361 TLEDMHRQGHQPDEELCSSLISSLGTIRAYSEAFSVYNILKYSKRTMCKALHEKILHILI 420
           TLEDMHRQGHQPDEELCSSLISSLGTIRAYSEAFSVYNILKYSKRTMCKALHEKILHILI
Sbjct: 475 TLEDMHRQGHQPDEELCSSLISSLGTIRAYSEAFSVYNILKYSKRTMCKALHEKILHILI 534

Query: 421 AGRLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKAIHCSGYKIDQDLFM 480
           AGRLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGN+NLINDVMKAIHCSGYKIDQDLFM
Sbjct: 535 AGRLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNINLINDVMKAIHCSGYKIDQDLFM 594

Query: 481 MATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQQHR 540
           MATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQ HR
Sbjct: 595 MATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQ-HR 654

Query: 541 VSKATRSHGNT 551
           VSKATRSHGNT
Sbjct: 655 VSKATRSHGNT 664

BLAST of Cp4.1LG03g09430 vs. NCBI nr
Match: XP_022980545.1 (pentatricopeptide repeat-containing protein At1g10910, chloroplastic [Cucurbita maxima])

HSP 1 Score: 1084 bits (2803), Expect = 0.0
Identity = 545/551 (98.91%), Postives = 548/551 (99.46%), Query Frame = 0

Query: 1   MSSRWQDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSIKNNIYI 60
           MSSRWQDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSIKNNIYI
Sbjct: 114 MSSRWQDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSIKNNIYI 173

Query: 61  CNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEHGYAKALELLKES 120
           CNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEHGYAKALELLKE 
Sbjct: 174 CNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEHGYAKALELLKEL 233

Query: 121 QNNGLCMDSVSYGTLIAVCASHNRLEDAESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDY 180
           QNNGLCMD VSYGTLIAVCASHNRLE+AESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDY
Sbjct: 234 QNNGLCMDCVSYGTLIAVCASHNRLENAESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDY 293

Query: 181 KKADELIEDMKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEMPYCLL 240
           KKADELIEDMKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALG+GENEMPYCLL
Sbjct: 294 KKADELIEDMKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGHGENEMPYCLL 353

Query: 241 MDGLAKAGAIREAKAVFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYD 300
           MDGLAKAGAIREAKAVFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYD
Sbjct: 354 MDGLAKAGAIREAKAVFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYD 413

Query: 301 RYDIVLLNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCKEKLYLLGCR 360
           RYDIV+LNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCKEKLYLLGCR
Sbjct: 414 RYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCKEKLYLLGCR 473

Query: 361 TLEDMHRQGHQPDEELCSSLISSLGTIRAYSEAFSVYNILKYSKRTMCKALHEKILHILI 420
           TLEDMHRQGHQPDEELCSSLISSLGTIRAYSEAFSVYNILKYSKRTMCKALHEKILHILI
Sbjct: 474 TLEDMHRQGHQPDEELCSSLISSLGTIRAYSEAFSVYNILKYSKRTMCKALHEKILHILI 533

Query: 421 AGRLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKAIHCSGYKIDQDLFM 480
           AGRLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKAIHCSGYKIDQDLFM
Sbjct: 534 AGRLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKAIHCSGYKIDQDLFM 593

Query: 481 MATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQQHR 540
           MATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQ HR
Sbjct: 594 MATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQ-HR 653

Query: 541 VSKATRSHGNT 551
           VSKATRSHGNT
Sbjct: 654 VSKATRSHGNT 663

BLAST of Cp4.1LG03g09430 vs. NCBI nr
Match: XP_038903773.1 (pentatricopeptide repeat-containing protein At1g10910, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 1006 bits (2602), Expect = 0.0
Identity = 506/548 (92.34%), Postives = 529/548 (96.53%), Query Frame = 0

Query: 1   MSSRWQDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSIKNNIYI 60
           M SRW+DLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALE+YNNIQEVSIKNNI+I
Sbjct: 115 MLSRWEDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEVYNNIQEVSIKNNIFI 174

Query: 61  CNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEHGYAKALELLKES 120
           CNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCI+V+HGYAKALELLKE 
Sbjct: 175 CNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIRVKHGYAKALELLKEL 234

Query: 121 QNNGLCMDSVSYGTLIAVCASHNRLEDAESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDY 180
           Q+NGL MD VSYGTLIA+CASH+RLEDAESFFNQM+ EG+SPNMFHYGSLLNAYSMSGDY
Sbjct: 235 QDNGLRMDCVSYGTLIAICASHDRLEDAESFFNQMRTEGHSPNMFHYGSLLNAYSMSGDY 294

Query: 181 KKADELIEDMKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEMPYCLL 240
           KKADELIEDMKL GLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEMPYCLL
Sbjct: 295 KKADELIEDMKLTGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEMPYCLL 354

Query: 241 MDGLAKAGAIREAKAVFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYD 300
           MDGLAKAG+IREAKA+FD+MKEKNV+SDGYAHSIMISAFCRGGLLEEAK LAKDFE TYD
Sbjct: 355 MDGLAKAGSIREAKAIFDEMKEKNVRSDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYD 414

Query: 301 RYDIVLLNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCKEKLYLLGCR 360
           RYDIV+LNTMLCAYCRAGEMESVMQMLRKMD+LAISPDYNTFHILIKYF KEKLYLL  R
Sbjct: 415 RYDIVILNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYR 474

Query: 361 TLEDMHRQGHQPDEELCSSLISSLGTIRAYSEAFSVYNILKYSKRTMCKALHEKILHILI 420
           TLEDMHR+GHQP+EELCSSLI SLG IRAYSEAFSVYNILKYSKRTMCKALHEKILHILI
Sbjct: 475 TLEDMHRKGHQPEEELCSSLILSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILI 534

Query: 421 AGRLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKAIHCSGYKIDQDLFM 480
           AGRLLKDAYVVVKDNAGLISKPAIRKFAF FMKFGNVNLINDVMKAIH SGYKIDQDLFM
Sbjct: 535 AGRLLKDAYVVVKDNAGLISKPAIRKFAFGFMKFGNVNLINDVMKAIHGSGYKIDQDLFM 594

Query: 481 MATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQQHR 540
           MATSR+IELPEKKDLFIQLL+WM GQGYVVDSSTRNLILKNSHLFGRQLIA+ILSKQ   
Sbjct: 595 MATSRYIELPEKKDLFIQLLRWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQTQ- 654

Query: 541 VSKATRSH 548
           VSK+T+SH
Sbjct: 655 VSKSTKSH 661

BLAST of Cp4.1LG03g09430 vs. ExPASy TrEMBL
Match: A0A6J1ERS3 (pentatricopeptide repeat-containing protein At1g10910, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111436973 PE=3 SV=1)

HSP 1 Score: 1087 bits (2811), Expect = 0.0
Identity = 546/551 (99.09%), Postives = 548/551 (99.46%), Query Frame = 0

Query: 1   MSSRWQDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSIKNNIYI 60
           MSSRWQDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSIKNNIYI
Sbjct: 115 MSSRWQDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSIKNNIYI 174

Query: 61  CNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEHGYAKALELLKES 120
           CNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEHGYAKALELLKES
Sbjct: 175 CNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEHGYAKALELLKES 234

Query: 121 QNNGLCMDSVSYGTLIAVCASHNRLEDAESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDY 180
           QNNGLCMDSVSYGTLIAVCASHNRLEDAESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDY
Sbjct: 235 QNNGLCMDSVSYGTLIAVCASHNRLEDAESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDY 294

Query: 181 KKADELIEDMKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEMPYCLL 240
           KKADELIEDMKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEMPYCLL
Sbjct: 295 KKADELIEDMKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEMPYCLL 354

Query: 241 MDGLAKAGAIREAKAVFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYD 300
           MDGL+KAGAIREAK VFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYD
Sbjct: 355 MDGLSKAGAIREAKTVFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYD 414

Query: 301 RYDIVLLNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCKEKLYLLGCR 360
           RYDIV+LNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCKEKLYLLGCR
Sbjct: 415 RYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCKEKLYLLGCR 474

Query: 361 TLEDMHRQGHQPDEELCSSLISSLGTIRAYSEAFSVYNILKYSKRTMCKALHEKILHILI 420
           TLEDMHRQGHQPDEELCS LISSLGTIRAYSEAFSVYNILKYSKRTMCKALHEKILHILI
Sbjct: 475 TLEDMHRQGHQPDEELCSYLISSLGTIRAYSEAFSVYNILKYSKRTMCKALHEKILHILI 534

Query: 421 AGRLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKAIHCSGYKIDQDLFM 480
           AGRLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKAIHCSGYKIDQDLFM
Sbjct: 535 AGRLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKAIHCSGYKIDQDLFM 594

Query: 481 MATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQQHR 540
           MATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQ HR
Sbjct: 595 MATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQ-HR 654

Query: 541 VSKATRSHGNT 551
           VSKATRSHGNT
Sbjct: 655 VSKATRSHGNT 664

BLAST of Cp4.1LG03g09430 vs. ExPASy TrEMBL
Match: A0A6J1IWQ9 (pentatricopeptide repeat-containing protein At1g10910, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111479891 PE=3 SV=1)

HSP 1 Score: 1084 bits (2803), Expect = 0.0
Identity = 545/551 (98.91%), Postives = 548/551 (99.46%), Query Frame = 0

Query: 1   MSSRWQDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSIKNNIYI 60
           MSSRWQDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSIKNNIYI
Sbjct: 114 MSSRWQDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSIKNNIYI 173

Query: 61  CNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEHGYAKALELLKES 120
           CNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEHGYAKALELLKE 
Sbjct: 174 CNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEHGYAKALELLKEL 233

Query: 121 QNNGLCMDSVSYGTLIAVCASHNRLEDAESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDY 180
           QNNGLCMD VSYGTLIAVCASHNRLE+AESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDY
Sbjct: 234 QNNGLCMDCVSYGTLIAVCASHNRLENAESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDY 293

Query: 181 KKADELIEDMKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEMPYCLL 240
           KKADELIEDMKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALG+GENEMPYCLL
Sbjct: 294 KKADELIEDMKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGHGENEMPYCLL 353

Query: 241 MDGLAKAGAIREAKAVFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYD 300
           MDGLAKAGAIREAKAVFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYD
Sbjct: 354 MDGLAKAGAIREAKAVFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYD 413

Query: 301 RYDIVLLNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCKEKLYLLGCR 360
           RYDIV+LNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCKEKLYLLGCR
Sbjct: 414 RYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCKEKLYLLGCR 473

Query: 361 TLEDMHRQGHQPDEELCSSLISSLGTIRAYSEAFSVYNILKYSKRTMCKALHEKILHILI 420
           TLEDMHRQGHQPDEELCSSLISSLGTIRAYSEAFSVYNILKYSKRTMCKALHEKILHILI
Sbjct: 474 TLEDMHRQGHQPDEELCSSLISSLGTIRAYSEAFSVYNILKYSKRTMCKALHEKILHILI 533

Query: 421 AGRLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKAIHCSGYKIDQDLFM 480
           AGRLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKAIHCSGYKIDQDLFM
Sbjct: 534 AGRLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKAIHCSGYKIDQDLFM 593

Query: 481 MATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQQHR 540
           MATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQ HR
Sbjct: 594 MATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQ-HR 653

Query: 541 VSKATRSHGNT 551
           VSKATRSHGNT
Sbjct: 654 VSKATRSHGNT 663

BLAST of Cp4.1LG03g09430 vs. ExPASy TrEMBL
Match: A0A6J1DRU4 (pentatricopeptide repeat-containing protein At1g10910, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111023788 PE=3 SV=1)

HSP 1 Score: 1006 bits (2602), Expect = 0.0
Identity = 503/551 (91.29%), Postives = 529/551 (96.01%), Query Frame = 0

Query: 1   MSSRWQDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSIKNNIYI 60
           M SRWQDLSQLFEWMQQTGKTNVSSYSSYIKF+GR LNPLKALEIYNNIQEVS KNN++I
Sbjct: 113 MLSRWQDLSQLFEWMQQTGKTNVSSYSSYIKFVGRSLNPLKALEIYNNIQEVSTKNNVFI 172

Query: 61  CNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEHGYAKALELLKES 120
           CNS+LNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKV+HGYAKALELLKE 
Sbjct: 173 CNSVLNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVKHGYAKALELLKEL 232

Query: 121 QNNGLCMDSVSYGTLIAVCASHNRLEDAESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDY 180
           Q NGLCMDSV YGTLIAVCASHNRLEDAESFF QMKNEG+SPNMFHYGSLLNAYS SGDY
Sbjct: 233 QFNGLCMDSVLYGTLIAVCASHNRLEDAESFFIQMKNEGHSPNMFHYGSLLNAYSTSGDY 292

Query: 181 KKADELIEDMKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEMPYCLL 240
           KKADELI+DMKL GLVPNKV+LTTLLKVYVRGGLFEKS+KLLS+LEALGYGENEMPYCLL
Sbjct: 293 KKADELIQDMKLTGLVPNKVVLTTLLKVYVRGGLFEKSKKLLSKLEALGYGENEMPYCLL 352

Query: 241 MDGLAKAGAIREAKAVFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYD 300
           MDGLAKAG+I EAK++FD+MKEKNVKSDGYAHSIMIS FCR GLLEEAK+LAKDFE TYD
Sbjct: 353 MDGLAKAGSITEAKSIFDEMKEKNVKSDGYAHSIMISGFCRSGLLEEAKKLAKDFEATYD 412

Query: 301 RYDIVLLNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCKEKLYLLGCR 360
           RYDIV+LNTMLCAYCRAGEMESVMQMLRKMD+LAISPDYNTFHILIKYFCKEKLYLLG R
Sbjct: 413 RYDIVILNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFCKEKLYLLGHR 472

Query: 361 TLEDMHRQGHQPDEELCSSLISSLGTIRAYSEAFSVYNILKYSKRTMCKALHEKILHILI 420
           TLEDMHR+GHQP+EELCSSLISSLG IRAYSEAFSVYN+LKYSKRTMCKALHEKILHILI
Sbjct: 473 TLEDMHRKGHQPEEELCSSLISSLGKIRAYSEAFSVYNMLKYSKRTMCKALHEKILHILI 532

Query: 421 AGRLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKAIHCSGYKIDQDLFM 480
           AGRLLKDAYVVVKDNA LIS+PAIRKFAF+FMK GNVNLINDVMKAIH SGYKIDQDLFM
Sbjct: 533 AGRLLKDAYVVVKDNAELISRPAIRKFAFEFMKSGNVNLINDVMKAIHGSGYKIDQDLFM 592

Query: 481 MATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQQHR 540
           MATSR+IELPEKKDLF+QLLQWM GQGYVVDSSTRNLILKNSHLFGRQLIA+ILSKQ H 
Sbjct: 593 MATSRYIELPEKKDLFLQLLQWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQ-HL 652

Query: 541 VSKATRSHGNT 551
           VSKATRSH N+
Sbjct: 653 VSKATRSHANS 662

BLAST of Cp4.1LG03g09430 vs. ExPASy TrEMBL
Match: A0A0A0LCK2 (PPR_long domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G842670 PE=3 SV=1)

HSP 1 Score: 988 bits (2555), Expect = 0.0
Identity = 494/551 (89.66%), Postives = 526/551 (95.46%), Query Frame = 0

Query: 1   MSSRWQDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSIKNNIYI 60
           M SRW+DLSQLFEWMQ+TGKTNVSSYSSYIKFMGRGLNPLKALE+YNNI+EVSIKN+I+I
Sbjct: 31  MLSRWKDLSQLFEWMQETGKTNVSSYSSYIKFMGRGLNPLKALEVYNNIEEVSIKNSIFI 90

Query: 61  CNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEHGYAKALELLKES 120
           CNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCI+V+HGYAKA+ELLKE 
Sbjct: 91  CNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIRVKHGYAKAMELLKEL 150

Query: 121 QNNGLCMDSVSYGTLIAVCASHNRLEDAESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDY 180
           Q+NGLCMD VSYGTLIA+CASHNRLEDAE FFNQM+ EG+SPNMFHYGSLLNAYS++GDY
Sbjct: 151 QDNGLCMDCVSYGTLIAICASHNRLEDAERFFNQMRAEGHSPNMFHYGSLLNAYSINGDY 210

Query: 181 KKADELIEDMKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEMPYCLL 240
           KKADELIEDMKL GLVPNKVILTTLLKVYVRGGLFEKSRKLLSELE+LGYGENEMPYCLL
Sbjct: 211 KKADELIEDMKLTGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELESLGYGENEMPYCLL 270

Query: 241 MDGLAKAGAIREAKAVFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYD 300
           MDGLAKAG+IREAK VFD+MK KNVK+DGYAHSIMISAFCRGGLLEEAK LAKDFE TYD
Sbjct: 271 MDGLAKAGSIREAKTVFDEMKAKNVKTDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYD 330

Query: 301 RYDIVLLNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCKEKLYLLGCR 360
           RYDIV+LNTMLCAYCRAGEMESVMQMLRKMD+LAISPDYNTFHILIKYF KEKLYLL  R
Sbjct: 331 RYDIVILNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYR 390

Query: 361 TLEDMHRQGHQPDEELCSSLISSLGTIRAYSEAFSVYNILKYSKRTMCKALHEKILHILI 420
           TLEDMHR+GHQP+EELCSSLI SLG IRAYSEAFSVYNILKYSKRTMCKALHEKILHILI
Sbjct: 391 TLEDMHRKGHQPEEELCSSLILSLGNIRAYSEAFSVYNILKYSKRTMCKALHEKILHILI 450

Query: 421 AGRLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKAIHCSGYKIDQDLFM 480
           AGRLLKDAYVVVKDNAG+ISKPAIRKFAF FMKFGNVNLINDVMKAIH SGYKIDQDLFM
Sbjct: 451 AGRLLKDAYVVVKDNAGVISKPAIRKFAFGFMKFGNVNLINDVMKAIHGSGYKIDQDLFM 510

Query: 481 MATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQQHR 540
           +ATSR+IELPEKKDLFIQLL+WM GQGYVVDSSTRNLILKN+HLFGRQLIA+ILSK    
Sbjct: 511 IATSRYIELPEKKDLFIQLLKWMPGQGYVVDSSTRNLILKNAHLFGRQLIAEILSKHSL- 570

Query: 541 VSKATRSHGNT 551
           +SK+T+S   T
Sbjct: 571 LSKSTKSREKT 580

BLAST of Cp4.1LG03g09430 vs. ExPASy TrEMBL
Match: A0A1S3CMQ2 (pentatricopeptide repeat-containing protein At1g10910, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502713 PE=3 SV=1)

HSP 1 Score: 987 bits (2552), Expect = 0.0
Identity = 492/551 (89.29%), Postives = 525/551 (95.28%), Query Frame = 0

Query: 1   MSSRWQDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSIKNNIYI 60
           M +RW+DLSQLFEWMQ+TGKTN+SSYSSYIKFMGRGLNPLKALE+YNNIQEVSIKN+I+I
Sbjct: 1   MLNRWKDLSQLFEWMQETGKTNISSYSSYIKFMGRGLNPLKALEVYNNIQEVSIKNSIFI 60

Query: 61  CNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEHGYAKALELLKES 120
           CNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCI+V+HGYAKA+ELLKE 
Sbjct: 61  CNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIRVKHGYAKAMELLKEL 120

Query: 121 QNNGLCMDSVSYGTLIAVCASHNRLEDAESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDY 180
           Q+NGLCMD V YGTLIA+CASHNRLEDAESFFNQM+ EG+SPNMFHYGSLLNAYS++GDY
Sbjct: 121 QDNGLCMDCVLYGTLIAICASHNRLEDAESFFNQMRAEGHSPNMFHYGSLLNAYSINGDY 180

Query: 181 KKADELIEDMKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEMPYCLL 240
           KKADELIEDMKL GLVPNKVILTTLLKVYVRGGLFEKSRKLLSELE+LGYGENEMPYCLL
Sbjct: 181 KKADELIEDMKLTGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELESLGYGENEMPYCLL 240

Query: 241 MDGLAKAGAIREAKAVFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYD 300
           MDGLAKAG++REAKAVFD+MK KNV+SDGYAHSIMISAFCR GLLEEAK LAKDFE TYD
Sbjct: 241 MDGLAKAGSVREAKAVFDEMKAKNVRSDGYAHSIMISAFCRSGLLEEAKLLAKDFEATYD 300

Query: 301 RYDIVLLNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCKEKLYLLGCR 360
           RYDIV+LNTMLCAYCRAGEMESVMQMLRKMD+LAISPDY TFHILIKYF KEKLYLL  R
Sbjct: 301 RYDIVILNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYTTFHILIKYFFKEKLYLLCYR 360

Query: 361 TLEDMHRQGHQPDEELCSSLISSLGTIRAYSEAFSVYNILKYSKRTMCKALHEKILHILI 420
           TLEDMHR+GHQP+EELCSSLISSLG IRAYSEAFSVYNILKYSKRTMCKALHEKILHILI
Sbjct: 361 TLEDMHRKGHQPEEELCSSLISSLGNIRAYSEAFSVYNILKYSKRTMCKALHEKILHILI 420

Query: 421 AGRLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKAIHCSGYKIDQDLFM 480
           AGRLLKDAYV+VKDN GLISKPAIRKFAF FMKFGNVNLINDVMKAIH SGYKIDQDLFM
Sbjct: 421 AGRLLKDAYVIVKDNEGLISKPAIRKFAFGFMKFGNVNLINDVMKAIHGSGYKIDQDLFM 480

Query: 481 MATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQQHR 540
           +ATSR+IELPEKKDLFIQLL WM GQGYVVDSSTRNLILKN+HLFGRQLIA+ILSK    
Sbjct: 481 IATSRYIELPEKKDLFIQLLHWMPGQGYVVDSSTRNLILKNAHLFGRQLIAEILSKHSL- 540

Query: 541 VSKATRSHGNT 551
           +SK+T+S  NT
Sbjct: 541 LSKSTKSRENT 550

BLAST of Cp4.1LG03g09430 vs. TAIR 10
Match: AT1G10910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 751.9 bits (1940), Expect = 3.6e-217
Identity = 365/536 (68.10%), Postives = 450/536 (83.96%), Query Frame = 0

Query: 1   MSSRWQDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSIKNNIYI 60
           +S RWQDL QLFEWMQQ GK +VS+YSS IKF+G   N  KALEIY +I + S K N+YI
Sbjct: 110 ISGRWQDLIQLFEWMQQHGKISVSTYSSCIKFVG-AKNVSKALEIYQSIPDESTKINVYI 169

Query: 61  CNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEHGYAKALELLKES 120
           CNSIL+CLV+NGK D+ +KLF QMK DGL PD VTY+T+L GCIKV++GY KA+EL+ E 
Sbjct: 170 CNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGEL 229

Query: 121 QNNGLCMDSVSYGTLIAVCASHNRLEDAESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDY 180
            +NG+ MDSV YGT++A+CAS+ R E+AE+F  QMK EG+SPN++HY SLLN+YS  GDY
Sbjct: 230 PHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDY 289

Query: 181 KKADELIEDMKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEMPYCLL 240
           KKADEL+ +MK  GLVPNKV++TTLLKVY++GGLF++SR+LLSELE+ GY ENEMPYC+L
Sbjct: 290 KKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCML 349

Query: 241 MDGLAKAGAIREAKAVFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYD 300
           MDGL+KAG + EA+++FD MK K V+SDGYA+SIMISA CR    +EAK+L++D ETTY+
Sbjct: 350 MDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYE 409

Query: 301 RYDIVLLNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCKEKLYLLGCR 360
           + D+V+LNTMLCAYCRAGEMESVM+M++KMDE A+SPDYNTFHILIKYF KEKL+LL  +
Sbjct: 410 KCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQ 469

Query: 361 TLEDMHRQGHQPDEELCSSLISSLGTIRAYSEAFSVYNILKYSKRTMCKALHEKILHILI 420
           T  DMH +GH+ +EELCSSLI  LG IRA +EAFSVYN+L+YSKRT+CK LHEKILHILI
Sbjct: 470 TTLDMHSKGHRLEEELCSSLIYHLGKIRAQAEAFSVYNMLRYSKRTICKELHEKILHILI 529

Query: 421 AGRLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKAIHCSGYKIDQDLFM 480
            G LLKDAY+VVKDNA +IS+P ++KF   FM  GN+NL+NDV+K +H SG+KIDQ  F 
Sbjct: 530 QGNLLKDAYIVVKDNAKMISQPTLKKFGRAFMISGNINLVNDVLKVLHGSGHKIDQVQFE 589

Query: 481 MATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSK 537
           +A SR+I  P+KK+L +QLLQWM GQGYVVDSSTRNLILKNSH+FGR LIA+ILSK
Sbjct: 590 IAISRYISQPDKKELLLQLLQWMPGQGYVVDSSTRNLILKNSHMFGRLLIAEILSK 644

BLAST of Cp4.1LG03g09430 vs. TAIR 10
Match: AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 163.3 bits (412), Expect = 5.5e-40
Identity = 91/323 (28.17%), Postives = 169/323 (52.32%), Query Frame = 0

Query: 62  NSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEHGYAKALELLKESQ 121
           NS++    + G    ++++ H M+N G  P+  +Y+ ++ G  K+     +A  +L E  
Sbjct: 393 NSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGK-IDEAYNVLNEMS 452

Query: 122 NNGLCMDSVSYGTLIAVCASHNRLEDAESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDYK 181
            +GL  ++V +  LI+     +R+ +A   F +M  +G  P+++ + SL++      + K
Sbjct: 453 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 512

Query: 182 KADELIEDMKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEMPYCLLM 241
            A  L+ DM  +G+V N V   TL+  ++R G  +++RKL++E+   G   +E+ Y  L+
Sbjct: 513 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 572

Query: 242 DGLAKAGAIREAKAVFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDR 301
            GL +AG + +A+++F++M          + +I+I+  CR G++EEA +  K+       
Sbjct: 573 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST 632

Query: 302 YDIVLLNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCKEKLYLLGCRT 361
            DIV  N+++   CRAG +E  + M RK+    I PD  TF+ L+ + CK       C  
Sbjct: 633 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLL 692

Query: 362 LEDMHRQGHQPDEELCSSLISSL 385
           L++    G  P+    S L+ S+
Sbjct: 693 LDEGIEDGFVPNHRTWSILLQSI 714

BLAST of Cp4.1LG03g09430 vs. TAIR 10
Match: AT1G74850.1 (plastid transcriptionally active 2 )

HSP 1 Score: 158.3 bits (399), Expect = 1.8e-38
Identity = 97/381 (25.46%), Postives = 181/381 (47.51%), Query Frame = 0

Query: 5   WQDLSQLFEWMQQT--GKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSIKNNIYICN 64
           WQ   +LF++MQ+    K N   Y+  I  +GR     K LE+++ +    +  +++   
Sbjct: 121 WQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYT 180

Query: 65  SILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEHGYAKALELLKESQN 124
           +++N   RNG+++TS++L  +MKN+ + P  +TY+T++  C +    +   L L  E ++
Sbjct: 181 ALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRH 240

Query: 125 NGLCMDSVSYGTLIAVCASHNRLEDAESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDYKK 184
            G+  D V+Y TL++ CA     ++AE  F  M + G  P++  Y  L+  +      +K
Sbjct: 241 EGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEK 300

Query: 185 ADELIEDMKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEMPYCLLMD 244
             +L+ +M   G +P+      LL+ Y + G  +++  +  +++A G   N   Y +L++
Sbjct: 301 VCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLN 360

Query: 245 GLAKAGAIREAKAVFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRY 304
              ++G   + + +F +MK  N   D   ++I+I  F  GG  +E   L  D        
Sbjct: 361 LFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEP 420

Query: 305 DIVLLNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCKEKLYLLGCRTL 364
           D+     ++ A  + G  E   ++L+ M    I P    +  +I+ F +  LY       
Sbjct: 421 DMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAF 480

Query: 365 EDMHRQGHQPDEELCSSLISS 384
             MH  G  P  E   SL+ S
Sbjct: 481 NTMHEVGSNPSIETFHSLLYS 501

BLAST of Cp4.1LG03g09430 vs. TAIR 10
Match: AT5G61990.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 157.1 bits (396), Expect = 3.9e-38
Identity = 91/392 (23.21%), Postives = 196/392 (50.00%), Query Frame = 0

Query: 11  LFEWMQQTGK-TNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSIKNNIYICNSILNCLV 70
           LF+ M  +G      +Y+S I+   R  N  +  E+   +++ +I  + Y   +++  + 
Sbjct: 369 LFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMC 428

Query: 71  RNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEHGYAKALELLKESQNNGLCMDS 130
            +G  D +  +  +M   G  P+ V Y+T++   ++    +  A+ +LKE +  G+  D 
Sbjct: 429 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQ-NSRFGDAMRVLKEMKEQGIAPDI 488

Query: 131 VSYGTLIAVCASHNRLEDAESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDYKKADELIED 190
             Y +LI   +   R+++A SF  +M   G  PN F YG+ ++ Y  + ++  AD+ +++
Sbjct: 489 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 548

Query: 191 MKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEMPYCLLMDGLAKAGA 250
           M+  G++PNKV+ T L+  Y + G   ++      +   G   +   Y +LM+GL K   
Sbjct: 549 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 608

Query: 251 IREAKAVFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVLLNT 310
           + +A+ +F +M+ K +  D +++ ++I+ F + G +++A  +  +        ++++ N 
Sbjct: 609 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 668

Query: 311 MLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCKEKLYLLGCRTLEDMHRQG 370
           +L  +CR+GE+E   ++L +M    + P+  T+  +I  +CK        R  ++M  +G
Sbjct: 669 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 728

Query: 371 HQPDEELCSSLISSLGTIRAYSEAFSVYNILK 402
             PD  + ++L+     +     A +++   K
Sbjct: 729 LVPDSFVYTTLVDGCCRLNDVERAITIFGTNK 759

BLAST of Cp4.1LG03g09430 vs. TAIR 10
Match: AT2G31400.1 (genomes uncoupled 1 )

HSP 1 Score: 154.1 bits (388), Expect = 3.3e-37
Identity = 90/342 (26.32%), Postives = 185/342 (54.09%), Query Frame = 0

Query: 10  QLFEWMQQTGKTN-VSSYSSYIKFMGRGLNPLKALEIYNNIQEVSIKNNIYICNSILNCL 69
           ++FE     G  N V ++S+ I   GR     +A+ ++N+++E  ++ N+   N++++  
Sbjct: 254 RIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDAC 313

Query: 70  VRNG-KFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIKVEHGYAKALELLKESQNNGLCM 129
            + G +F    K F +M+ +G+ PD +T++++L  C +    +  A  L  E  N  +  
Sbjct: 314 GKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSR-GGLWEAARNLFDEMTNRRIEQ 373

Query: 130 DSVSYGTLIAVCASHNRLEDAESFFNQMKNEGYSPNMFHYGSLLNAYSMSGDYKKADELI 189
           D  SY TL+       +++ A     QM  +   PN+  Y ++++ ++ +G + +A  L 
Sbjct: 374 DVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLF 433

Query: 190 EDMKLKGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEMPYCLLMDGLAKA 249
            +M+  G+  ++V   TLL +Y + G  E++  +L E+ ++G  ++ + Y  L+ G  K 
Sbjct: 434 GEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQ 493

Query: 250 GAIREAKAVFDQMKEKNVKSDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVLL 309
           G   E K VF +MK ++V  +   +S +I  + +GGL +EA ++ ++F++   R D+VL 
Sbjct: 494 GKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLY 553

Query: 310 NTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYF 350
           + ++ A C+ G + S + ++ +M +  ISP+  T++ +I  F
Sbjct: 554 SALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q0WVV05.1e-21668.10Pentatricopeptide repeat-containing protein At1g10910, chloroplastic OS=Arabidop... [more]
Q9FMF67.7e-3928.17Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... [more]
Q9S7Q22.5e-3725.46Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidop... [more]
Q9FIT75.6e-3723.21Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidop... [more]
Q9SIC94.7e-3626.32Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
XP_023528492.10.0100.00pentatricopeptide repeat-containing protein At1g10910, chloroplastic [Cucurbita ... [more]
XP_022930554.10.099.09pentatricopeptide repeat-containing protein At1g10910, chloroplastic [Cucurbita ... [more]
KAG7018152.10.099.09Pentatricopeptide repeat-containing protein, chloroplastic [Cucurbita argyrosper... [more]
XP_022980545.10.098.91pentatricopeptide repeat-containing protein At1g10910, chloroplastic [Cucurbita ... [more]
XP_038903773.10.092.34pentatricopeptide repeat-containing protein At1g10910, chloroplastic isoform X1 ... [more]
Match NameE-valueIdentityDescription
A0A6J1ERS30.099.09pentatricopeptide repeat-containing protein At1g10910, chloroplastic OS=Cucurbit... [more]
A0A6J1IWQ90.098.91pentatricopeptide repeat-containing protein At1g10910, chloroplastic OS=Cucurbit... [more]
A0A6J1DRU40.091.29pentatricopeptide repeat-containing protein At1g10910, chloroplastic OS=Momordic... [more]
A0A0A0LCK20.089.66PPR_long domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G842670 PE... [more]
A0A1S3CMQ20.089.29pentatricopeptide repeat-containing protein At1g10910, chloroplastic isoform X2 ... [more]
Match NameE-valueIdentityDescription
AT1G10910.13.6e-21768.10Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G64320.15.5e-4028.17Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G74850.11.8e-3825.46plastid transcriptionally active 2 [more]
AT5G61990.13.9e-3823.21Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G31400.13.3e-3726.32genomes uncoupled 1 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 109..229
e-value: 1.5E-29
score: 105.4
coord: 302..435
e-value: 1.1E-17
score: 66.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..108
e-value: 4.4E-22
score: 80.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 230..301
e-value: 1.5E-13
score: 52.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 59..93
e-value: 1.9E-9
score: 35.1
coord: 167..198
e-value: 1.4E-6
score: 26.1
coord: 130..163
e-value: 4.6E-8
score: 30.8
coord: 307..338
e-value: 2.1E-6
score: 25.5
coord: 237..268
e-value: 1.4E-5
score: 22.9
coord: 341..374
e-value: 2.0E-5
score: 22.4
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 57..104
e-value: 1.3E-13
score: 50.9
coord: 303..351
e-value: 4.5E-10
score: 39.6
coord: 239..281
e-value: 4.2E-10
score: 39.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 92..127
score: 9.141782
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 233..267
score: 10.807899
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 163..197
score: 11.421732
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 303..337
score: 11.377887
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 338..372
score: 8.933517
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 128..162
score: 12.156139
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 57..91
score: 11.893068
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 110..225
e-value: 2.6E-9
score: 36.7
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 2..546
NoneNo IPR availablePANTHERPTHR47942:SF49OS01G0559500 PROTEINcoord: 2..546
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 33..187

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g09430.1Cp4.1LG03g09430.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding