Cp4.1LG03g08220 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG03g08220
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	cyclic dof factor 3-like
Location	Cp4.1LG03: 2973260 .. 2975181 (+)
RNA-Seq Expression	Cp4.1LG03g08220
Synteny	Cp4.1LG03g08220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACACGTCGTCGTTTCAGTCGTTAGATTCATTTTCCATTTTATCACTTATTTTAAATTGACACTATCATATATTATATTATATTATTACCAAAAAGAAACATCAATTTAAAATTTAAATTATTTATATTGTCGGTAGGATGAATAGATTTCGTGTTGGAAAACCGAAATAGTAATAAAATATTTATTTAATAATAATAATATTTATTAATTAATTAAAATGGAAAAAAAGGGAAAAAGTGGAGTTCTCCTAGTCGGATGTAAAATTTATCCACGCTGTCACTTCACACGTGTCGGATCTCTCTCTCTCTCTCTCTTTCTTTGATTTTGATTTACAAATGAAGAAAATAAAATAGCAAAAATAGGAAAAAAAAAAAACAAAACAGGGCAGAAATGTCGGAGCCTAAAGATCCGGCGATCAAGCTCTTCGGGAAGACGATTCCTCTGCCGGAAGCTTCTCCTCCCAGTCCTCCGCCGCCGTCTTCCTTACCCGGTAACCATACCACCGCCTCTGTTAATCATGACCTCGATTCTCCTTCTTCGAGCTTCTCGCCGGAAGGCAATATCCATGGCGATGTTGAAGATCTGGAGGCCGATAAGGTCTGGATTTGCCTCAAATCGTTTTCTATTTTGTTTTTTCAGATACCCTTTTCTGGTTTGATATTGATTTTGTTGATTTTGTTGACTCGACATGTTTTTCTGTTCGGAGAAATTTAGGTTTCTTTCTTGTTTGGTTTATCCTTTGTTTGTTCTTGATTTGTGTCGTGTGAAATGATCCTTGTCTATGATATTCTTATTCTGCTATCAAGATTTTGGGTTTTGATGCTTTCGGAATTTGGGTCAAGATTATTGAGTTTGTGCTATTTGGTAATGTTGGGGTTTTATGTGTTCATGAACAGAATGAAACAAGTAACTCACAAGAGAAGACTCTGAAGAAACCCGACAAGATTCTTCCATGTCCGCGTTGTAACAGCATGGACACCAAATTCTGTTACTATAATAACTACAACGTTAATCAACCGCGACATTTTTGTAAGAATTGTCAAAGGTATTGGACGGCTGGTGGGGTGATGAGGAATGTGCCAGTGGGTGCAGGGCGTCGTAAGAACAAAAGCTCTGCTACACACCATCGTCAAATTATTGCAATGGAAGCACTTCAACAGCCTAGAATTGATGTTTGTAATGGCAATGTGATGGCATTTGGTTCAGATGCTGCCCCTCTTTGTGAATCAATGGCTTCCATTTTAAACATTGCTGATAAAACAAGACAGAATAATGAAGATGATGATGAAGTGATTCATAATTGTGAAGGCGTTTTACCTTCAATTCCATTCATCCCTGGGGCTTACACTTGGAATTATGGTTTATATCCACCAGGAATTGGTATGCCTATGTATCCAACCGCGCCAATCTGGGGCGCCTGGACACTCCCATGGGTACCACAGGCGGCATGGATGAGCCCTGTGGGTCAAAGCCATGCGCCAAATTCTCCAACATTGGGGAAACATTCAAGAGATAAGAAAGGGGGGGAGAGGTGCATTTGGATACCAAAAACGTTGAGGATTGATGACCCAGAAGAAGCAGCTAAAAGCTCCATATGGGCAACTCTTGGAATCAAGAATGAGAAGAGGGATTCAGTGGGCGAAGGGGTTTTCAAGCCCTTTCGATTCAATGACAGCGATGAACAGAATGAGAGAACCAAACCCACTTCAGTGTTGGAACTCAATCCAGCTGCATTGTCCAGATCAATCAAATTCAATGAAAATGTATATCACTGAGTTCATCAGATCCGACCAAAATGAGTTGAGTTTGAAGTTTGTCTGAATCAAAACGTACATATATATATATATAAAGTAAATGTGTATGTAAATAAAGTTCTGGAAGTTTTGGTCATATTAGTTTCCAGTTTTGATCCATTTTAT

mRNA sequence

ATGACACCTTCTCCTCCCAGTCCTCCGCCGCCGTCTTCCTTACCCGGTAACCATACCACCGCCTCTGTTAATCATGACCTCGATTCTCCTTCTTCGAGCTTCTCGCCGGAAGGCAATATCCATGGCGATGTTGAAGATCTGGAGGCCGATAAGAATGAAACAAGTAACTCACAAGAGAAGACTCTGAAGAAACCCGACAAGATTCTTCCATGTCCGCGTTGTAACAGCATGGACACCAAATTCTGTTACTATAATAACTACAACGTTAATCAACCGCGACATTTTTGTAAGAATTGTCAAAGGTATTGGACGGCTGGTGGGGTGATGAGGAATGTGCCAGTGGGTGCAGGGCGTCGTAAGAACAAAAGCTCTGCTACACACCATCGTCAAATTATTGCAATGGAAGCACTTCAACAGCCTAGAATTGATGTTTGTAATGGCAATGTGATGGCATTTGGTTCAGATGCTGCCCCTCTTTGTGAATCAATGGCTTCCATTTTAAACATTGCTGATAAAACAAGACAGAATAATGAAGATGATGATGAAGTGATTCATAATTGTGAAGGCGTTTTACCTTCAATTCCATTCATCCCTGGGGCTTACACTTGGAATTATGGTTTATATCCACCAGGAATTGGTATGCCTATGTATCCAACCGCGCCAATCTGGGGCGCCTGGACACTCCCATGGGTACCACAGGCGGCATGGATGAGCCCTGTGGGTCAAAGCCATGCGCCAAATTCTCCAACATTGGGGAAACATTCAAGAGATAAGAAAGGGGGGGAGAGGTGCATTTGGATACCAAAAACGTTGAGGATTGATGACCCAGAAGAAGCAGCTAAAAGCTCCATATGGGCAACTCTTGGAATCAAGAATGAGAAGAGGGATTCAGTGGGCGAAGGGGTTTTCAAGCCCTTTCGATTCAATGACAGCGATGAACAGAATGAGAGAACCAAACCCACTTCAGTGTTGGAACTCAATCCAGCTGCATTGTCCAGATCAATCAAATTCAATGAAAATGTATATCACTGAGTTCATCAGATCCGACCAAAATGAGTTGAGTTTGAAGTTTGTCTGAATCAAAACGTACATATATATATATATAAAGTAAATGTGTATGTAAATAAAGTTCTGGAAGTTTTGGTCATATTAGTTTCCAGTTTTGATCCATTTTAT

Coding sequence (CDS)

ATGACACCTTCTCCTCCCAGTCCTCCGCCGCCGTCTTCCTTACCCGGTAACCATACCACCGCCTCTGTTAATCATGACCTCGATTCTCCTTCTTCGAGCTTCTCGCCGGAAGGCAATATCCATGGCGATGTTGAAGATCTGGAGGCCGATAAGAATGAAACAAGTAACTCACAAGAGAAGACTCTGAAGAAACCCGACAAGATTCTTCCATGTCCGCGTTGTAACAGCATGGACACCAAATTCTGTTACTATAATAACTACAACGTTAATCAACCGCGACATTTTTGTAAGAATTGTCAAAGGTATTGGACGGCTGGTGGGGTGATGAGGAATGTGCCAGTGGGTGCAGGGCGTCGTAAGAACAAAAGCTCTGCTACACACCATCGTCAAATTATTGCAATGGAAGCACTTCAACAGCCTAGAATTGATGTTTGTAATGGCAATGTGATGGCATTTGGTTCAGATGCTGCCCCTCTTTGTGAATCAATGGCTTCCATTTTAAACATTGCTGATAAAACAAGACAGAATAATGAAGATGATGATGAAGTGATTCATAATTGTGAAGGCGTTTTACCTTCAATTCCATTCATCCCTGGGGCTTACACTTGGAATTATGGTTTATATCCACCAGGAATTGGTATGCCTATGTATCCAACCGCGCCAATCTGGGGCGCCTGGACACTCCCATGGGTACCACAGGCGGCATGGATGAGCCCTGTGGGTCAAAGCCATGCGCCAAATTCTCCAACATTGGGGAAACATTCAAGAGATAAGAAAGGGGGGGAGAGGTGCATTTGGATACCAAAAACGTTGAGGATTGATGACCCAGAAGAAGCAGCTAAAAGCTCCATATGGGCAACTCTTGGAATCAAGAATGAGAAGAGGGATTCAGTGGGCGAAGGGGTTTTCAAGCCCTTTCGATTCAATGACAGCGATGAACAGAATGAGAGAACCAAACCCACTTCAGTGTTGGAACTCAATCCAGCTGCATTGTCCAGATCAATCAAATTCAATGAAAATGTATATCACTGA

Protein sequence

MTPSPPSPPPPSSLPGNHTTASVNHDLDSPSSSFSPEGNIHGDVEDLEADKNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAGRRKNKSSATHHRQIIAMEALQQPRIDVCNGNVMAFGSDAAPLCESMASILNIADKTRQNNEDDDEVIHNCEGVLPSIPFIPGAYTWNYGLYPPGIGMPMYPTAPIWGAWTLPWVPQAAWMSPVGQSHAPNSPTLGKHSRDKKGGERCIWIPKTLRIDDPEEAAKSSIWATLGIKNEKRDSVGEGVFKPFRFNDSDEQNERTKPTSVLELNPAALSRSIKFNENVYH

Homology

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BLAST of Cp4.1LG03g08220 vs. ExPASy Swiss-Prot
Match: Q93ZL5 (Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2)

HSP 1 Score: 263.1 bits (671), Expect = 4.5e-69
Identity = 165/350 (47.14%), Postives = 195/350 (55.71%), Query Frame = 0


Query: 54  TSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVP 113
           T+ SQE  LKKPDKILPCPRCNSM+TKFCYYNNYNVNQPRHFCK CQRYWTAGG MRNVP
Sbjct: 123 TACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVP 182

Query: 114 VGAGRRKNKSSATH---HRQIIAMEALQQ-PRIDVCN---GNVMAFGSDAAPLCESMASI 173
           VGAGRRKNKS A+H   H  I + EA+Q+  R D+ +    N++ FGSD+  LCESMAS 
Sbjct: 183 VGAGRRKNKSPASHYNRHVSITSAEAMQKVARTDLQHPNGANLLTFGSDSV-LCESMASG 242

Query: 174 LNIADKT---------------------RQNNEDDDEVIHNCEGVLPSIPFIPG-----A 233
           LN+ +K+                      Q NE+   V       LP +P  PG      
Sbjct: 243 LNLVEKSLLKTQTVLQEPNEGLKITVPLNQTNEEAGTV-----SPLPKVPCFPGPPPTWP 302

Query: 234 YTWNYGLYPPGIG---MPMYPTAPIW-------GAW-TLPWVPQAAWMSPVGQSHAPNSP 293
           Y WN      G+    +P YP    W       GAW +  W+PQ    SP G +  PNSP
Sbjct: 303 YAWN------GVSWTILPFYPPPAYWSCPGVSPGAWNSFTWMPQP--NSPSGSN--PNSP 362

Query: 294 TLGKHSRD-------------------KKGGERCIWIPKTLRIDDPEEAAKSSIWATLGI 341
           TLGKHSRD                   K   ERC+W+PKTLRIDDPEEAAKSSIW TLGI
Sbjct: 363 TLGKHSRDENAAEPGTAFDETESLGREKSKPERCLWVPKTLRIDDPEEAAKSSIWETLGI 422

[Close]

BLAST of Cp4.1LG03g08220 vs. ExPASy Swiss-Prot
Match: Q8LFV3 (Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2)

HSP 1 Score: 253.4 bits (646), Expect = 3.5e-66
Identity = 167/406 (41.13%), Postives = 207/406 (50.99%), Query Frame = 0


Query: 4   SPPSPPPPSSLPGNHTTASVNHDLDSPSSSFSPEGNIHGDVEDLEA-DKNETSNSQEKTL 63
           SP    P  S   N+     + +   P +    E      +E  +  + N+ +    KTL
Sbjct: 44  SPEKVTPELSDKNNNNCNDNSFNNSKPETLDKEEATSTDQIESSDTPEDNQQTTPDGKTL 103

Query: 64  KKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAGRRKNK 123
           KKP KILPCPRC SM+TKFCYYNNYN+NQPRHFCK CQRYWTAGG MRNVPVGAGRRKNK
Sbjct: 104 KKPTKILPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNK 163

Query: 124 SSATHHRQIIAMEALQQPRID---VCNGNVMAFGSD------AAPLCESMA--------- 183
           SS++H+R I   EAL+  R+D     N  V++FG +      AAP+   M          
Sbjct: 164 SSSSHYRHITISEALEAARLDPGLQANTRVLSFGLEAQQQHVAAPMTPVMKLQEDQKVSN 223

Query: 184 ----SILNIADK------------------TRQNNEDDDEVIHNCEGVLPS--------- 243
                   +AD+                  T  NN   DE       V+ +         
Sbjct: 224 GARNRFHGLADQRLVARVENGDDCSSGSSVTTSNNHSVDESRAQSGSVVEAQMNNNNNNN 283

Query: 244 ------IPFIPGAYTWNYGLYPPGIGMPMYPTAPIWGAWTLPWVPQAAWMSPVGQSHA-P 303
                 IP +P  YTWN  + PPG   P     P +  WT+P +P     SP+ Q  +  
Sbjct: 284 MNGYACIPGVPWPYTWNPAMPPPGFYPPPGYPMPFYPYWTIPMLPPHQSSSPISQKCSNT 343

Query: 304 NSPTLGKHSRD----KKGGER-------CIWIPKTLRIDDPEEAAKSSIWATLGIKNEKR 342
           NSPTLGKH RD    KK  E        C+ +PKTLRIDDP EAAKSSIW TLGIKNE  
Sbjct: 344 NSPTLGKHPRDEGSSKKDNETERKQKAGCVLVPKTLRIDDPNEAAKSSIWTTLGIKNEAM 403

[Close]

BLAST of Cp4.1LG03g08220 vs. ExPASy Swiss-Prot
Match: Q8W1E3 (Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2)

HSP 1 Score: 222.2 bits (565), Expect = 8.7e-57
Identity = 141/313 (45.05%), Postives = 180/313 (57.51%), Query Frame = 0


Query: 43  DVEDLEADKNET-----SNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCK 102
           +V D E +KN+       + ++KTLKKP KILPCPRCNSM+TKFCYYNNYNVNQPRHFCK
Sbjct: 23  EVADEEEEKNQNKTLTDQSEKDKTLKKPTKILPCPRCNSMETKFCYYNNYNVNQPRHFCK 82

Query: 103 NCQRYWTAGGVMRNVPVGAGRRKNK--SSATHHRQIIAMEALQQPRIDVCNGNVMAFG-S 162
            CQRYWT+GG MR+VP+GAGRRKNK  S  +H+  +   E          NG V++F   
Sbjct: 83  ACQRYWTSGGTMRSVPIGAGRRKNKNNSPTSHYHHVTISET---------NGPVLSFSLG 142

Query: 163 DAAPLCESMASILNIADKTRQNNEDDDEVIHNCEGVLPSIPFIPGAYTWNYGLYPPGIGM 222
           D   +  +      +  +   N+E  +   +N    L   P +   YTWN   Y      
Sbjct: 143 DDQKVSSNRFGNQKLVARIENNDERSN---NNTSNGLNCFPGVSWPYTWNPAFY------ 202

Query: 223 PMYPTAPIWGAWTLPWVPQAAWMSPVGQSHAPNSPTLGKHSRD------KKGGERCIWIP 282
           P+YP       W++P        SPV  S +P S TLGKHSRD      +K     + +P
Sbjct: 203 PVYP------YWSMP-----VLSSPV--SSSPTS-TLGKHSRDEDETVKQKQRNGSVLVP 262

Query: 283 KTLRIDDPEEAAKSSIWATLGIKNEKRDSVGEGVFKPFRFNDSDEQNERTKPTSVLELNP 342
           KTLRIDDP EAAKSSIW TLGIKNE   + G G  K  + ++ +E    T+ + VL  NP
Sbjct: 263 KTLRIDDPNEAAKSSIWTTLGIKNEVMFN-GFGSKKEVKLSNKEE----TETSLVLCANP 298

[Close]

BLAST of Cp4.1LG03g08220 vs. ExPASy Swiss-Prot
Match: Q9SEZ3 (Cyclic dof factor 5 OS=Arabidopsis thaliana OX=3702 GN=CDF5 PE=2 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.6e-42
Identity = 118/332 (35.54%), Postives = 175/332 (52.71%), Query Frame = 0


Query: 26  DLDSPSSSFSPEGNIHGDVEDLEADKNETSNSQEKT-LKKPDKILPCPRCNSMDTKFCYY 85
           ++ SP SS   + N     E        T++ ++ T LKKPDK++PCPRC S +TKFCYY
Sbjct: 91  EISSPRSS---KNNCDQQSEITTTTTTSTTSGEKSTALKKPDKLIPCPRCESANTKFCYY 150

Query: 86  NNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAGRRKNKS--SATHHRQIIAMEALQQPRI 145
           NNYNVNQPR+FC+NCQRYWTAGG MRNVPVG+GRRKNK   S+ H+ Q+ + +       
Sbjct: 151 NNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRRKNKGWPSSNHYLQVTSEDCDNNN-- 210

Query: 146 DVCNGNVMAFGSDAAPLCESMASILNIADKTRQNNEDDDEVIHNCEGVLPSIPFIP-GAY 205
              +G +++FGS  + + E+        D  + + +   +   + +G LP    +P  + 
Sbjct: 211 ---SGTILSFGSSESSVTETGKH--QSGDTAKISADSVSQENKSYQGFLPPQVMLPNNSS 270

Query: 206 TWNYGLYPPGIGMPMYPTAPIWGAWTLPWVPQAAWMSPVGQSHAPNSPTLGKHSRDKKGG 265
            W Y   P G     YP    WG  T+P  P            +  S  LGK SRD+  G
Sbjct: 271 PWPYQWSPTGPNASFYPVPFYWGC-TVPIYPT-----------SETSSCLGKRSRDQTEG 330

Query: 266 E-----------RCIWIPKTLRIDDPEEAAKSSIWATLGIKNEKRDSVGEGVFKPFRFND 325
                       R   + ++LR++   EA+KS++W+ L  K EK+ + G  +F  F    
Sbjct: 331 RINDTNTTITTTRARLVSESLRMN--IEASKSAVWSKLPTKPEKK-TQGFSLFNGFDTKG 390

Query: 326 SDEQNERTKPTS-VLELNPAALSRSIKFNENV 342
           +  ++     TS  L+ NPAA+SR++ F E++
Sbjct: 391 NSNRSSLVSETSHSLQANPAAMSRAMNFRESM 397

[Close]

BLAST of Cp4.1LG03g08220 vs. ExPASy Swiss-Prot
Match: Q9LQX4 (Dof zinc finger protein DOF1.3 OS=Arabidopsis thaliana OX=3702 GN=DOF1.3 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 4.7e-34
Identity = 117/349 (33.52%), Postives = 172/349 (49.28%), Query Frame = 0


Query: 11  PSSLPGNHTTASVNHDLDSPSSSFSPEGNIHGDVEDLEADKNETSNSQEKT--LKKPDKI 70
           P  +     T + +  L S  ++ S E + + D  D  ++    ++ +EKT  LKKPDKI
Sbjct: 47  PHMMNNQSVTDNTSLKLSSNLNNESKETSENSD--DQHSEITTITSEEEKTTELKKPDKI 106

Query: 71  LPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAGRRKNKSSATHH 130
           LPCPRCNS DTKFCYYNNYNVNQPRHFC+ CQRYWTAGG MR VPVG+GRRKNK   +  
Sbjct: 107 LPCPRCNSADTKFCYYNNYNVNQPRHFCRKCQRYWTAGGSMRIVPVGSGRRKNKGWVSSD 166

Query: 131 RQIIAMEALQQPRIDVCNGNVMAFGSDAAPLCESMASILNIADKTRQNNEDDDEVIHNCE 190
            Q + + +      +  +  +++F S  + + E      + +++ + N E   +  +N +
Sbjct: 167 -QYLHITSEDTDNYNSSSTKILSFESSDSLVTERPK---HQSNEVKINAEPVSQEPNNFQ 226

Query: 191 GVLPSIPFIPGAYTWNYGLYPPGIGMPMYPTAPIWGAWTLPWVPQAAWMSPVGQSHAPNS 250
           G+LP     P +  W Y  YPP    P +   P++    +P      W      S    S
Sbjct: 227 GLLPP-QASPVSPPWPY-QYPPN---PSFYHMPVYWGCAIP-----VW------STLDTS 286

Query: 251 PTLGKHSRDKKGGERCIWIPKTLRIDDPEEAAKSSIWATLGIKNEKRDSVGEGVFKP--- 310
             LGK +RD+   E       T++         S +  +  IKNE   +    V+ P   
Sbjct: 287 TCLGKRTRDETSHE-------TVKESKNAFERTSLLLESQSIKNETSMATNNHVWYPVPM 346

Query: 311 -------FRF----NDSDEQNERTKPTSVLEL--NPAALSRSIKFNENV 342
                  F F     ++   N R  P + L L  NPAA++RS+ F E++
Sbjct: 347 TREKTQEFSFFSNGAETKSSNNRFVPETYLNLQANPAAMARSMNFRESI 366

[Close]

BLAST of Cp4.1LG03g08220 vs. NCBI nr
Match: XP_023526474.1 (cyclic dof factor 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 709 bits (1830), Expect = 8.74e-258
Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 0


Query: 4   SPPSPPPPSSLPGNHTTASVNHDLDSPSSSFSPEGNIHGDVEDLEADKNETSNSQEKTLK 63
           SPPSPPPPSSLPGNHTTASVNHDLDSPSSSFSPEGNIHGDVEDLEADKNETSNSQEKTLK
Sbjct: 22  SPPSPPPPSSLPGNHTTASVNHDLDSPSSSFSPEGNIHGDVEDLEADKNETSNSQEKTLK 81

Query: 64  KPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAGRRKNKS 123
           KPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAGRRKNKS
Sbjct: 82  KPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAGRRKNKS 141

Query: 124 SATHHRQIIAMEALQQPRIDVCNGNVMAFGSDAAPLCESMASILNIADKTRQNNEDDDEV 183
           SATHHRQIIAMEALQQPRIDVCNGNVMAFGSDAAPLCESMASILNIADKTRQNNEDDDEV
Sbjct: 142 SATHHRQIIAMEALQQPRIDVCNGNVMAFGSDAAPLCESMASILNIADKTRQNNEDDDEV 201

Query: 184 IHNCEGVLPSIPFIPGAYTWNYGLYPPGIGMPMYPTAPIWGAWTLPWVPQAAWMSPVGQS 243
           IHNCEGVLPSIPFIPGAYTWNYGLYPPGIGMPMYPTAPIWGAWTLPWVPQAAWMSPVGQS
Sbjct: 202 IHNCEGVLPSIPFIPGAYTWNYGLYPPGIGMPMYPTAPIWGAWTLPWVPQAAWMSPVGQS 261

Query: 244 HAPNSPTLGKHSRDKKGGERCIWIPKTLRIDDPEEAAKSSIWATLGIKNEKRDSVGEGVF 303
           HAPNSPTLGKHSRDKKGGERCIWIPKTLRIDDPEEAAKSSIWATLGIKNEKRDSVGEGVF
Sbjct: 262 HAPNSPTLGKHSRDKKGGERCIWIPKTLRIDDPEEAAKSSIWATLGIKNEKRDSVGEGVF 321

Query: 304 KPFRFNDSDEQNERTKPTSVLELNPAALSRSIKFNENVYH 343
           KPFRFNDSDEQNERTKPTSVLELNPAALSRSIKFNENVYH
Sbjct: 322 KPFRFNDSDEQNERTKPTSVLELNPAALSRSIKFNENVYH 361

[Close]

BLAST of Cp4.1LG03g08220 vs. NCBI nr
Match: KAG6580957.1 (Cyclic dof factor 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 699 bits (1803), Expect = 1.14e-253
Identity = 335/340 (98.53%), Postives = 337/340 (99.12%), Query Frame = 0


Query: 4   SPPSPPPPSSLPGNHTTASVNHDLDSPSSSFSPEGNIHGDVEDLEADKNETSNSQEKTLK 63
           SPPS PPPSSLPGNHTTASVNHDLDSPSSSFSPEGNIHGDVEDLEADKNETSNSQEKTLK
Sbjct: 22  SPPSHPPPSSLPGNHTTASVNHDLDSPSSSFSPEGNIHGDVEDLEADKNETSNSQEKTLK 81

Query: 64  KPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAGRRKNKS 123
           KPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGG+MRNVPVGAGRRKNKS
Sbjct: 82  KPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGMMRNVPVGAGRRKNKS 141

Query: 124 SATHHRQIIAMEALQQPRIDVCNGNVMAFGSDAAPLCESMASILNIADKTRQNNEDDDEV 183
           SATHHRQIIA EALQQPRIDVCNGNV AFGSDAAPLCESMASILNIADKTRQNN+DDDEV
Sbjct: 142 SATHHRQIIATEALQQPRIDVCNGNVTAFGSDAAPLCESMASILNIADKTRQNNDDDDEV 201

Query: 184 IHNCEGVLPSIPFIPGAYTWNYGLYPPGIGMPMYPTAPIWGAWTLPWVPQAAWMSPVGQS 243
           IHNCEGVLPSIPFIPGAYTWNYGLYPPGIGMPMYPTAPIWGAWTLPWVPQAAWMSPVGQS
Sbjct: 202 IHNCEGVLPSIPFIPGAYTWNYGLYPPGIGMPMYPTAPIWGAWTLPWVPQAAWMSPVGQS 261

Query: 244 HAPNSPTLGKHSRDKKGGERCIWIPKTLRIDDPEEAAKSSIWATLGIKNEKRDSVGEGVF 303
           HAPNSPTLGKHSRDKKGGERCIWIPKTLRIDDPEEAAKSSIWATLGIKNEKRDSVGEGVF
Sbjct: 262 HAPNSPTLGKHSRDKKGGERCIWIPKTLRIDDPEEAAKSSIWATLGIKNEKRDSVGEGVF 321

Query: 304 KPFRFNDSDEQNERTKPTSVLELNPAALSRSIKFNENVYH 343
           KPFRFNDSDEQNERTKPTSVLELNPAALSRSIKFNENVYH
Sbjct: 322 KPFRFNDSDEQNERTKPTSVLELNPAALSRSIKFNENVYH 361

[Close]

BLAST of Cp4.1LG03g08220 vs. NCBI nr
Match: XP_022935694.1 (cyclic dof factor 3-like [Cucurbita moschata])

HSP 1 Score: 691 bits (1782), Expect = 1.82e-250
Identity = 331/340 (97.35%), Postives = 333/340 (97.94%), Query Frame = 0


Query: 4   SPPSPPPPSSLPGNHTTASVNHDLDSPSSSFSPEGNIHGDVEDLEADKNETSNSQEKTLK 63
           SPPS PPPSSLPGNHTTASVNHDLDSPSSSFSPEGNIHGDVEDLEADKNE SNSQEKTLK
Sbjct: 22  SPPSHPPPSSLPGNHTTASVNHDLDSPSSSFSPEGNIHGDVEDLEADKNEISNSQEKTLK 81

Query: 64  KPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAGRRKNKS 123
           KPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGG+MRNVPVGAGRRKNKS
Sbjct: 82  KPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGMMRNVPVGAGRRKNKS 141

Query: 124 SATHHRQIIAMEALQQPRIDVCNGNVMAFGSDAAPLCESMASILNIADKTRQNNEDDDEV 183
           SATHHRQIIA EALQQPRIDVCNGNVMAFGSDAAPLCESMASILNI DKTRQNN+DDDEV
Sbjct: 142 SATHHRQIIATEALQQPRIDVCNGNVMAFGSDAAPLCESMASILNIGDKTRQNNDDDDEV 201

Query: 184 IHNCEGVLPSIPFIPGAYTWNYGLYPPGIGMPMYPTAPIWGAWTLPWVPQAAWMSPVGQS 243
           IHNCEGVLPSIPF PGAYTWNYGLYPPGI  PMYPTAPIWGAWTLPWVPQAAWMSPVGQS
Sbjct: 202 IHNCEGVLPSIPFTPGAYTWNYGLYPPGIARPMYPTAPIWGAWTLPWVPQAAWMSPVGQS 261

Query: 244 HAPNSPTLGKHSRDKKGGERCIWIPKTLRIDDPEEAAKSSIWATLGIKNEKRDSVGEGVF 303
           HAPNSPTLGKHSRDKKGGERCIWIPKTLRIDDPEEAAKSSIWATLGIKNEKRDSVGEGVF
Sbjct: 262 HAPNSPTLGKHSRDKKGGERCIWIPKTLRIDDPEEAAKSSIWATLGIKNEKRDSVGEGVF 321

Query: 304 KPFRFNDSDEQNERTKPTSVLELNPAALSRSIKFNENVYH 343
           KPFRFNDSDEQNERTKPTSVLELNPAALSRSIKFNENVYH
Sbjct: 322 KPFRFNDSDEQNERTKPTSVLELNPAALSRSIKFNENVYH 361

[Close]

BLAST of Cp4.1LG03g08220 vs. NCBI nr
Match: KAG7017702.1 (Cyclic dof factor 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 516 bits (1330), Expect = 1.45e-182
Identity = 267/340 (78.53%), Postives = 270/340 (79.41%), Query Frame = 0


Query: 4   SPPSPPPPSSLPGNHTTASVNHDLDSPSSSFSPEGNIHGDVEDLEADKNETSNSQEKTLK 63
           SPPS PPPSSLPGNHTTASVNHDLDSPSSSFSPEGNIHGDVEDLEADK            
Sbjct: 22  SPPSHPPPSSLPGNHTTASVNHDLDSPSSSFSPEGNIHGDVEDLEADK------------ 81

Query: 64  KPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAGRRKNKS 123
               +L                                +W                KNKS
Sbjct: 82  ----VL------------------------------DGWWDD--------------KNKS 141

Query: 124 SATHHRQIIAMEALQQPRIDVCNGNVMAFGSDAAPLCESMASILNIADKTRQNNEDDDEV 183
           SATHHRQIIA EALQQPRIDVCNGNVMAFGSDAAPLCESMASILNI DKTRQNN+DDDEV
Sbjct: 142 SATHHRQIIATEALQQPRIDVCNGNVMAFGSDAAPLCESMASILNIGDKTRQNNDDDDEV 201

Query: 184 IHNCEGVLPSIPFIPGAYTWNYGLYPPGIGMPMYPTAPIWGAWTLPWVPQAAWMSPVGQS 243
           IHNCEGVLPSIPF PGAYTWNYGLYPPGI  PMYPTAPIWGAWTLPWVPQAAWMSPVGQS
Sbjct: 202 IHNCEGVLPSIPFTPGAYTWNYGLYPPGIARPMYPTAPIWGAWTLPWVPQAAWMSPVGQS 261

Query: 244 HAPNSPTLGKHSRDKKGGERCIWIPKTLRIDDPEEAAKSSIWATLGIKNEKRDSVGEGVF 303
           HAPNSPTLGKHSRDKKGGERCIWIPKTLRIDDPEEAAKSSIWATLGIKNEKRDSVGEGVF
Sbjct: 262 HAPNSPTLGKHSRDKKGGERCIWIPKTLRIDDPEEAAKSSIWATLGIKNEKRDSVGEGVF 301

Query: 304 KPFRFNDSDEQNERTKPTSVLELNPAALSRSIKFNENVYH 343
           KPFRFNDSDEQNERTKPTSVLELNPAALSRSIKFNENVYH
Sbjct: 322 KPFRFNDSDEQNERTKPTSVLELNPAALSRSIKFNENVYH 301

[Close]

BLAST of Cp4.1LG03g08220 vs. NCBI nr
Match: XP_038905359.1 (cyclic dof factor 2 [Benincasa hispida])

HSP 1 Score: 430 bits (1106), Expect = 2.57e-145
Identity = 260/493 (52.74%), Postives = 287/493 (58.22%), Query Frame = 0


Query: 4   SPPSPPPPSSLP----GNHTTASVNHDLDSPSSSFSPEGNIHGDVEDLEADK-------- 63
           SP +P  PSSLP     +  TA+VNHD DS SSS SPEGNI GD EDLE DK        
Sbjct: 22  SPATPQLPSSLPILTASDKNTAAVNHDHDSSSSSLSPEGNIDGDGEDLEVDKETVREKSG 81

Query: 64  ------------------------------------------------------NETSNS 123
                                                                 NETSNS
Sbjct: 82  ETKLEDGDGDGDGGLSGSTEEFTNSDTSAMRSDNSKVLSGEESNPSSTTKTDEQNETSNS 141

Query: 124 QEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAG 183
           QEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGG MRNVPVGAG
Sbjct: 142 QEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAG 201

Query: 184 RRKNKSSATHHRQIIAMEALQQPRIDVCNG------------NVMAFGSDAAPLCESMAS 243
           RRKNKSSA+HHRQII  EALQ  R DV NG            NV+AFGSDA PLCESMAS
Sbjct: 202 RRKNKSSASHHRQIIVSEALQHARTDVSNGIHHSTLKPNGNGNVLAFGSDA-PLCESMAS 261

Query: 244 ILNIADKTRQN----------------------NEDD---------------------DE 303
           ILNIADKTRQN                      N+D                      D+
Sbjct: 262 ILNIADKTRQNSTRNGFQKPEALKIPVAYENGENDDQSQESAATPSFIDNEEGKTGPQDQ 321

Query: 304 VIHNCEGVLP-SIPFIPGA---YTWNYG----------LYPPGIGMPMYPTAPIWG---- 340
           VIHNC+G LP  IPF PGA   Y WN             Y PGI MP YPTAP WG    
Sbjct: 322 VIHNCQGFLPPQIPFFPGAPWPYPWNSPQWSSPVPPPTFYSPGIPMPFYPTAPFWGCTVP 381

[Close]

BLAST of Cp4.1LG03g08220 vs. ExPASy TrEMBL
Match: A0A6J1F653 (cyclic dof factor 3-like OS=Cucurbita moschata OX=3662 GN=LOC111442476 PE=4 SV=1)

HSP 1 Score: 691 bits (1782), Expect = 8.79e-251
Identity = 331/340 (97.35%), Postives = 333/340 (97.94%), Query Frame = 0


Query: 4   SPPSPPPPSSLPGNHTTASVNHDLDSPSSSFSPEGNIHGDVEDLEADKNETSNSQEKTLK 63
           SPPS PPPSSLPGNHTTASVNHDLDSPSSSFSPEGNIHGDVEDLEADKNE SNSQEKTLK
Sbjct: 22  SPPSHPPPSSLPGNHTTASVNHDLDSPSSSFSPEGNIHGDVEDLEADKNEISNSQEKTLK 81

Query: 64  KPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAGRRKNKS 123
           KPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGG+MRNVPVGAGRRKNKS
Sbjct: 82  KPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGMMRNVPVGAGRRKNKS 141

Query: 124 SATHHRQIIAMEALQQPRIDVCNGNVMAFGSDAAPLCESMASILNIADKTRQNNEDDDEV 183
           SATHHRQIIA EALQQPRIDVCNGNVMAFGSDAAPLCESMASILNI DKTRQNN+DDDEV
Sbjct: 142 SATHHRQIIATEALQQPRIDVCNGNVMAFGSDAAPLCESMASILNIGDKTRQNNDDDDEV 201

Query: 184 IHNCEGVLPSIPFIPGAYTWNYGLYPPGIGMPMYPTAPIWGAWTLPWVPQAAWMSPVGQS 243
           IHNCEGVLPSIPF PGAYTWNYGLYPPGI  PMYPTAPIWGAWTLPWVPQAAWMSPVGQS
Sbjct: 202 IHNCEGVLPSIPFTPGAYTWNYGLYPPGIARPMYPTAPIWGAWTLPWVPQAAWMSPVGQS 261

Query: 244 HAPNSPTLGKHSRDKKGGERCIWIPKTLRIDDPEEAAKSSIWATLGIKNEKRDSVGEGVF 303
           HAPNSPTLGKHSRDKKGGERCIWIPKTLRIDDPEEAAKSSIWATLGIKNEKRDSVGEGVF
Sbjct: 262 HAPNSPTLGKHSRDKKGGERCIWIPKTLRIDDPEEAAKSSIWATLGIKNEKRDSVGEGVF 321

Query: 304 KPFRFNDSDEQNERTKPTSVLELNPAALSRSIKFNENVYH 343
           KPFRFNDSDEQNERTKPTSVLELNPAALSRSIKFNENVYH
Sbjct: 322 KPFRFNDSDEQNERTKPTSVLELNPAALSRSIKFNENVYH 361

[Close]

BLAST of Cp4.1LG03g08220 vs. ExPASy TrEMBL
Match: A0A5A7UEW6 (Cyclic dof factor 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007890 PE=4 SV=1)

HSP 1 Score: 425 bits (1093), Expect = 1.16e-143
Identity = 257/494 (52.02%), Postives = 283/494 (57.29%), Query Frame = 0


Query: 3   PSPPSPPPPSS-----LPGNHTTASVNHDLDSPSSSFSPEGNIHGDVEDLEADK------ 62
           PSP +P  PSS      P +HTTA  NHD DS SS+ SPE NI  D EDLE DK      
Sbjct: 21  PSPATPHLPSSSLPIPTPADHTTAVANHDHDSSSSTLSPEANIDVDGEDLEVDKDAISEK 80

Query: 63  ----------------------------------------------------------NE 122
                                                                     NE
Sbjct: 81  SGGTKLEDRDGDGDGDGGLSVSTEEFTNSDTSVVKTENSKVLSGEESNPSSTTKTDEQNE 140

Query: 123 TSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVP 182
           TSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGG MRNVP
Sbjct: 141 TSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVP 200

Query: 183 VGAGRRKNKSSATHHRQIIAMEALQQPRIDVCNG----------NVMAFGSDAAPLCESM 242
           VGAGRRKNKSSA+HHRQII  EALQ  R DV NG          NV+AFGSDA PLCESM
Sbjct: 201 VGAGRRKNKSSASHHRQIIVSEALQHARTDVPNGIHHSTLKPNGNVLAFGSDA-PLCESM 260

Query: 243 ASILNIADKTRQN----------------------NEDD--------------------D 302
           ASILNIADKTRQN                      N+D                     D
Sbjct: 261 ASILNIADKTRQNSTRNGFQKPEALKIPVAYENGENDDQSQESAPTPFINNEEGKTGPQD 320

Query: 303 EVIHNCEGVLPS-IPFIPGA---YTWNYG----------LYPPGIGMPMYPTAPIWG--- 340
           +VIHNC+G LP  +PF PG    Y WN             YPPGI MP YPTAP WG   
Sbjct: 321 QVIHNCQGFLPPHVPFFPGTPWPYPWNSPQWSSPVPPPTFYPPGIPMPFYPTAPFWGCTV 380

[Close]

BLAST of Cp4.1LG03g08220 vs. ExPASy TrEMBL
Match: A0A1S3B7G1 (cyclic dof factor 2 OS=Cucumis melo OX=3656 GN=LOC103486992 PE=4 SV=1)

HSP 1 Score: 425 bits (1093), Expect = 1.16e-143
Identity = 257/494 (52.02%), Postives = 283/494 (57.29%), Query Frame = 0


Query: 3   PSPPSPPPPSS-----LPGNHTTASVNHDLDSPSSSFSPEGNIHGDVEDLEADK------ 62
           PSP +P  PSS      P +HTTA  NHD DS SS+ SPE NI  D EDLE DK      
Sbjct: 21  PSPATPHLPSSSLPIPTPADHTTAVANHDHDSSSSTLSPEANIDVDGEDLEVDKDAISEK 80

Query: 63  ----------------------------------------------------------NE 122
                                                                     NE
Sbjct: 81  SGGTKLEDRDGDGDGDGGLSVSTEEFTNSDTSVVKTENSKVLSGEESNPSSTTKTDEQNE 140

Query: 123 TSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVP 182
           TSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGG MRNVP
Sbjct: 141 TSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVP 200

Query: 183 VGAGRRKNKSSATHHRQIIAMEALQQPRIDVCNG----------NVMAFGSDAAPLCESM 242
           VGAGRRKNKSSA+HHRQII  EALQ  R DV NG          NV+AFGSDA PLCESM
Sbjct: 201 VGAGRRKNKSSASHHRQIIVSEALQHARTDVPNGIHHSTLKPNGNVLAFGSDA-PLCESM 260

Query: 243 ASILNIADKTRQN----------------------NEDD--------------------D 302
           ASILNIADKTRQN                      N+D                     D
Sbjct: 261 ASILNIADKTRQNSTRNGFQKPEALKIPVAYENGENDDQSQESAPTPFINNEEGKTGPQD 320

Query: 303 EVIHNCEGVLPS-IPFIPGA---YTWNYG----------LYPPGIGMPMYPTAPIWG--- 340
           +VIHNC+G LP  +PF PG    Y WN             YPPGI MP YPTAP WG   
Sbjct: 321 QVIHNCQGFLPPHVPFFPGTPWPYPWNSPQWSSPVPPPTFYPPGIPMPFYPTAPFWGCTV 380

[Close]

BLAST of Cp4.1LG03g08220 vs. ExPASy TrEMBL
Match: A0A6J1F054 (cyclic dof factor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111440958 PE=4 SV=1)

HSP 1 Score: 423 bits (1087), Expect = 3.89e-143
Identity = 247/469 (52.67%), Postives = 277/469 (59.06%), Query Frame = 0


Query: 6   PSPPPPSSLPGNHTTASVNHDLDSPSSSFSPEGNIHGDV-------EDLEADK------- 65
           P+ P PSSLP + +TA+VNHD DSPSS+ SPEGNI GD        EDLEADK       
Sbjct: 23  PASPLPSSLPIDDSTATVNHDRDSPSSTVSPEGNIDGDDDDDDEDGEDLEADKEIVGGKS 82

Query: 66  ------------------------------------NETSNSQEKTLKKPDKILPCPRCN 125
                                               NETSNSQEKTLKKPDKILPCPRCN
Sbjct: 83  NGTNVEDLDGDGDENLSKVVCGEESNPSSTTKNDEQNETSNSQEKTLKKPDKILPCPRCN 142

Query: 126 SMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAGRRKNKSSATHHRQIIAME 185
           SMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGG MRNVPVGAGRRKNK+SA+H+RQII  E
Sbjct: 143 SMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSASHNRQIIVSE 202

Query: 186 ALQQPRIDVCN----------GNVMAFGSDAAPLCESMASILNIADKTRQN--------- 245
           A Q  R DV N          GNV+AFGSD  PLCESM SILNIAD+TRQN         
Sbjct: 203 AFQHARTDVSNVMSHSSLRPNGNVLAFGSDK-PLCESMTSILNIADQTRQNGSRNGFKKP 262

Query: 246 ------------------------NED-----DDEVIHNCEGVLPSIPFIPGAYTWNY-- 305
                                   NE+      D+VIH+C+G LP IPF P    W Y  
Sbjct: 263 EALKIPVAYENGEHDHHQSQGSCANEEAKSGRQDQVIHDCQGFLPQIPFFPPGAPWPYPW 322

Query: 306 -------------GLYPPGIGMPMYPTAPIWGA-----WTLPWVPQAAWMSPVGQSHAPN 340
                          YPPGI +P YP AP WG      WTLPW+PQ   +SP+     PN
Sbjct: 323 HSPQWSSPVPPPPNFYPPGIPVPFYPAAPFWGCTVPNPWTLPWLPQPPSLSPI----TPN 382

[Close]

BLAST of Cp4.1LG03g08220 vs. ExPASy TrEMBL
Match: A0A6J1DUM3 (cyclic dof factor 2 OS=Momordica charantia OX=3673 GN=LOC111023617 PE=4 SV=1)

HSP 1 Score: 421 bits (1082), Expect = 4.70e-142
Identity = 254/491 (51.73%), Postives = 284/491 (57.84%), Query Frame = 0


Query: 4   SPPSPPPPSSLP-------GNHTTASVNHDLDSPSSSFSPEGNIHGDVEDLEADK----- 63
           SP +PPP SSL        GN+  A+V+HD DSPSS  SPEGN  GD EDLEA+K     
Sbjct: 22  SPATPPPSSSLATLVSAADGNY--AAVSHDHDSPSSRLSPEGNTDGDGEDLEAEKEPMGG 81

Query: 64  -----------------------------------------------------NETSNSQ 123
                                                                NETSNSQ
Sbjct: 82  KSGGTEQEDGDRAMSVSTEEFTNSDTSAVRSENSKVPSGEESNLSSTTKTDEQNETSNSQ 141

Query: 124 EKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAGR 183
           EKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGG MRNVPVGAGR
Sbjct: 142 EKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGR 201

Query: 184 RKNKSSATHHRQIIAMEALQQPRIDVCN----------GNVMAFGSDAAPLCESMASILN 243
           RKNK+SA+H RQII  EALQ  R +V N          GNV+AFGSD  PLCESMASILN
Sbjct: 202 RKNKNSASHQRQIIVSEALQHSRNNVTNVIHHSALKPNGNVLAFGSDT-PLCESMASILN 261

Query: 244 IADKTRQNN---------------------EDDDE-----------------------VI 303
           +ADKTRQN                      E+DD+                       VI
Sbjct: 262 LADKTRQNGTRNGFHKPEALKIPAPPNQNGENDDQSQESAATPSFINSEEGKAGPQEQVI 321

Query: 304 HNCEGVLP-SIPFIPGA---YTWNYG----------LYPPGIGMPMYPTAPIWG-----A 340
           HNC+G LP  IPF PGA   Y WN             YPPG  MP YPTAP WG     A
Sbjct: 322 HNCQGFLPPQIPFFPGAPWPYPWNSPRWSSPVPPPTFYPPGFPMPFYPTAPFWGCTVPGA 381

[Close]

BLAST of Cp4.1LG03g08220 vs. TAIR 10
Match: AT5G39660.1 (cycling DOF factor 2 )

HSP 1 Score: 263.1 bits (671), Expect = 3.2e-70
Identity = 165/350 (47.14%), Postives = 195/350 (55.71%), Query Frame = 0


Query: 54  TSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVP 113
           T+ SQE  LKKPDKILPCPRCNSM+TKFCYYNNYNVNQPRHFCK CQRYWTAGG MRNVP
Sbjct: 123 TACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVP 182

Query: 114 VGAGRRKNKSSATH---HRQIIAMEALQQ-PRIDVCN---GNVMAFGSDAAPLCESMASI 173
           VGAGRRKNKS A+H   H  I + EA+Q+  R D+ +    N++ FGSD+  LCESMAS 
Sbjct: 183 VGAGRRKNKSPASHYNRHVSITSAEAMQKVARTDLQHPNGANLLTFGSDSV-LCESMASG 242

Query: 174 LNIADKT---------------------RQNNEDDDEVIHNCEGVLPSIPFIPG-----A 233
           LN+ +K+                      Q NE+   V       LP +P  PG      
Sbjct: 243 LNLVEKSLLKTQTVLQEPNEGLKITVPLNQTNEEAGTV-----SPLPKVPCFPGPPPTWP 302

Query: 234 YTWNYGLYPPGIG---MPMYPTAPIW-------GAW-TLPWVPQAAWMSPVGQSHAPNSP 293
           Y WN      G+    +P YP    W       GAW +  W+PQ    SP G +  PNSP
Sbjct: 303 YAWN------GVSWTILPFYPPPAYWSCPGVSPGAWNSFTWMPQP--NSPSGSN--PNSP 362

Query: 294 TLGKHSRD-------------------KKGGERCIWIPKTLRIDDPEEAAKSSIWATLGI 341
           TLGKHSRD                   K   ERC+W+PKTLRIDDPEEAAKSSIW TLGI
Sbjct: 363 TLGKHSRDENAAEPGTAFDETESLGREKSKPERCLWVPKTLRIDDPEEAAKSSIWETLGI 422

[Close]

BLAST of Cp4.1LG03g08220 vs. TAIR 10
Match: AT5G39660.2 (cycling DOF factor 2 )

HSP 1 Score: 263.1 bits (671), Expect = 3.2e-70
Identity = 165/350 (47.14%), Postives = 195/350 (55.71%), Query Frame = 0


Query: 54  TSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVP 113
           T+ SQE  LKKPDKILPCPRCNSM+TKFCYYNNYNVNQPRHFCK CQRYWTAGG MRNVP
Sbjct: 123 TACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVP 182

Query: 114 VGAGRRKNKSSATH---HRQIIAMEALQQ-PRIDVCN---GNVMAFGSDAAPLCESMASI 173
           VGAGRRKNKS A+H   H  I + EA+Q+  R D+ +    N++ FGSD+  LCESMAS 
Sbjct: 183 VGAGRRKNKSPASHYNRHVSITSAEAMQKVARTDLQHPNGANLLTFGSDSV-LCESMASG 242

Query: 174 LNIADKT---------------------RQNNEDDDEVIHNCEGVLPSIPFIPG-----A 233
           LN+ +K+                      Q NE+   V       LP +P  PG      
Sbjct: 243 LNLVEKSLLKTQTVLQEPNEGLKITVPLNQTNEEAGTV-----SPLPKVPCFPGPPPTWP 302

Query: 234 YTWNYGLYPPGIG---MPMYPTAPIW-------GAW-TLPWVPQAAWMSPVGQSHAPNSP 293
           Y WN      G+    +P YP    W       GAW +  W+PQ    SP G +  PNSP
Sbjct: 303 YAWN------GVSWTILPFYPPPAYWSCPGVSPGAWNSFTWMPQP--NSPSGSN--PNSP 362

Query: 294 TLGKHSRD-------------------KKGGERCIWIPKTLRIDDPEEAAKSSIWATLGI 341
           TLGKHSRD                   K   ERC+W+PKTLRIDDPEEAAKSSIW TLGI
Sbjct: 363 TLGKHSRDENAAEPGTAFDETESLGREKSKPERCLWVPKTLRIDDPEEAAKSSIWETLGI 422

[Close]

BLAST of Cp4.1LG03g08220 vs. TAIR 10
Match: AT3G47500.1 (cycling DOF factor 3 )

HSP 1 Score: 253.4 bits (646), Expect = 2.5e-67
Identity = 167/406 (41.13%), Postives = 207/406 (50.99%), Query Frame = 0


Query: 4   SPPSPPPPSSLPGNHTTASVNHDLDSPSSSFSPEGNIHGDVEDLEA-DKNETSNSQEKTL 63
           SP    P  S   N+     + +   P +    E      +E  +  + N+ +    KTL
Sbjct: 44  SPEKVTPELSDKNNNNCNDNSFNNSKPETLDKEEATSTDQIESSDTPEDNQQTTPDGKTL 103

Query: 64  KKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAGRRKNK 123
           KKP KILPCPRC SM+TKFCYYNNYN+NQPRHFCK CQRYWTAGG MRNVPVGAGRRKNK
Sbjct: 104 KKPTKILPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNK 163

Query: 124 SSATHHRQIIAMEALQQPRID---VCNGNVMAFGSD------AAPLCESMA--------- 183
           SS++H+R I   EAL+  R+D     N  V++FG +      AAP+   M          
Sbjct: 164 SSSSHYRHITISEALEAARLDPGLQANTRVLSFGLEAQQQHVAAPMTPVMKLQEDQKVSN 223

Query: 184 ----SILNIADK------------------TRQNNEDDDEVIHNCEGVLPS--------- 243
                   +AD+                  T  NN   DE       V+ +         
Sbjct: 224 GARNRFHGLADQRLVARVENGDDCSSGSSVTTSNNHSVDESRAQSGSVVEAQMNNNNNNN 283

Query: 244 ------IPFIPGAYTWNYGLYPPGIGMPMYPTAPIWGAWTLPWVPQAAWMSPVGQSHA-P 303
                 IP +P  YTWN  + PPG   P     P +  WT+P +P     SP+ Q  +  
Sbjct: 284 MNGYACIPGVPWPYTWNPAMPPPGFYPPPGYPMPFYPYWTIPMLPPHQSSSPISQKCSNT 343

Query: 304 NSPTLGKHSRD----KKGGER-------CIWIPKTLRIDDPEEAAKSSIWATLGIKNEKR 342
           NSPTLGKH RD    KK  E        C+ +PKTLRIDDP EAAKSSIW TLGIKNE  
Sbjct: 344 NSPTLGKHPRDEGSSKKDNETERKQKAGCVLVPKTLRIDDPNEAAKSSIWTTLGIKNEAM 403

[Close]

BLAST of Cp4.1LG03g08220 vs. TAIR 10
Match: AT5G62430.1 (cycling DOF factor 1 )

HSP 1 Score: 222.2 bits (565), Expect = 6.2e-58
Identity = 141/313 (45.05%), Postives = 180/313 (57.51%), Query Frame = 0


Query: 43  DVEDLEADKNET-----SNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCK 102
           +V D E +KN+       + ++KTLKKP KILPCPRCNSM+TKFCYYNNYNVNQPRHFCK
Sbjct: 23  EVADEEEEKNQNKTLTDQSEKDKTLKKPTKILPCPRCNSMETKFCYYNNYNVNQPRHFCK 82

Query: 103 NCQRYWTAGGVMRNVPVGAGRRKNK--SSATHHRQIIAMEALQQPRIDVCNGNVMAFG-S 162
            CQRYWT+GG MR+VP+GAGRRKNK  S  +H+  +   E          NG V++F   
Sbjct: 83  ACQRYWTSGGTMRSVPIGAGRRKNKNNSPTSHYHHVTISET---------NGPVLSFSLG 142

Query: 163 DAAPLCESMASILNIADKTRQNNEDDDEVIHNCEGVLPSIPFIPGAYTWNYGLYPPGIGM 222
           D   +  +      +  +   N+E  +   +N    L   P +   YTWN   Y      
Sbjct: 143 DDQKVSSNRFGNQKLVARIENNDERSN---NNTSNGLNCFPGVSWPYTWNPAFY------ 202

Query: 223 PMYPTAPIWGAWTLPWVPQAAWMSPVGQSHAPNSPTLGKHSRD------KKGGERCIWIP 282
           P+YP       W++P        SPV  S +P S TLGKHSRD      +K     + +P
Sbjct: 203 PVYP------YWSMP-----VLSSPV--SSSPTS-TLGKHSRDEDETVKQKQRNGSVLVP 262

Query: 283 KTLRIDDPEEAAKSSIWATLGIKNEKRDSVGEGVFKPFRFNDSDEQNERTKPTSVLELNP 342
           KTLRIDDP EAAKSSIW TLGIKNE   + G G  K  + ++ +E    T+ + VL  NP
Sbjct: 263 KTLRIDDPNEAAKSSIWTTLGIKNEVMFN-GFGSKKEVKLSNKEE----TETSLVLCANP 298

[Close]

BLAST of Cp4.1LG03g08220 vs. TAIR 10
Match: AT1G69570.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 174.9 bits (442), Expect = 1.1e-43
Identity = 118/332 (35.54%), Postives = 175/332 (52.71%), Query Frame = 0


Query: 26  DLDSPSSSFSPEGNIHGDVEDLEADKNETSNSQEKT-LKKPDKILPCPRCNSMDTKFCYY 85
           ++ SP SS   + N     E        T++ ++ T LKKPDK++PCPRC S +TKFCYY
Sbjct: 91  EISSPRSS---KNNCDQQSEITTTTTTSTTSGEKSTALKKPDKLIPCPRCESANTKFCYY 150

Query: 86  NNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAGRRKNKS--SATHHRQIIAMEALQQPRI 145
           NNYNVNQPR+FC+NCQRYWTAGG MRNVPVG+GRRKNK   S+ H+ Q+ + +       
Sbjct: 151 NNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRRKNKGWPSSNHYLQVTSEDCDNNN-- 210

Query: 146 DVCNGNVMAFGSDAAPLCESMASILNIADKTRQNNEDDDEVIHNCEGVLPSIPFIP-GAY 205
              +G +++FGS  + + E+        D  + + +   +   + +G LP    +P  + 
Sbjct: 211 ---SGTILSFGSSESSVTETGKH--QSGDTAKISADSVSQENKSYQGFLPPQVMLPNNSS 270

Query: 206 TWNYGLYPPGIGMPMYPTAPIWGAWTLPWVPQAAWMSPVGQSHAPNSPTLGKHSRDKKGG 265
            W Y   P G     YP    WG  T+P  P            +  S  LGK SRD+  G
Sbjct: 271 PWPYQWSPTGPNASFYPVPFYWGC-TVPIYPT-----------SETSSCLGKRSRDQTEG 330

Query: 266 E-----------RCIWIPKTLRIDDPEEAAKSSIWATLGIKNEKRDSVGEGVFKPFRFND 325
                       R   + ++LR++   EA+KS++W+ L  K EK+ + G  +F  F    
Sbjct: 331 RINDTNTTITTTRARLVSESLRMN--IEASKSAVWSKLPTKPEKK-TQGFSLFNGFDTKG 390

Query: 326 SDEQNERTKPTS-VLELNPAALSRSIKFNENV 342
           +  ++     TS  L+ NPAA+SR++ F E++
Sbjct: 391 NSNRSSLVSETSHSLQANPAAMSRAMNFRESM 397

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g08220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93ZL5	4.5e-69	47.14	Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2	[more]
Q8LFV3	3.5e-66	41.13	Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2	[more]
Q8W1E3	8.7e-57	45.05	Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2	[more]
Q9SEZ3	1.6e-42	35.54	Cyclic dof factor 5 OS=Arabidopsis thaliana OX=3702 GN=CDF5 PE=2 SV=1	[more]
Q9LQX4	4.7e-34	33.52	Dof zinc finger protein DOF1.3 OS=Arabidopsis thaliana OX=3702 GN=DOF1.3 PE=3 SV...	[more]

BLAST of Cp4.1LG03g08220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023526474.1	8.74e-258	100.00	cyclic dof factor 3-like [Cucurbita pepo subsp. pepo]	[more]
KAG6580957.1	1.14e-253	98.53	Cyclic dof factor 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022935694.1	1.82e-250	97.35	cyclic dof factor 3-like [Cucurbita moschata]	[more]
KAG7017702.1	1.45e-182	78.53	Cyclic dof factor 3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038905359.1	2.57e-145	52.74	cyclic dof factor 2 [Benincasa hispida]	[more]

BLAST of Cp4.1LG03g08220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F653	8.79e-251	97.35	cyclic dof factor 3-like OS=Cucurbita moschata OX=3662 GN=LOC111442476 PE=4 SV=1	[more]
A0A5A7UEW6	1.16e-143	52.02	Cyclic dof factor 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G...	[more]
A0A1S3B7G1	1.16e-143	52.02	cyclic dof factor 2 OS=Cucumis melo OX=3656 GN=LOC103486992 PE=4 SV=1	[more]
A0A6J1F054	3.89e-143	52.67	cyclic dof factor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111440958 PE=4 SV=1	[more]
A0A6J1DUM3	4.70e-142	51.73	cyclic dof factor 2 OS=Momordica charantia OX=3673 GN=LOC111023617 PE=4 SV=1	[more]

BLAST of Cp4.1LG03g08220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39660.1	3.2e-70	47.14	cycling DOF factor 2	[more]
AT5G39660.2	3.2e-70	47.14	cycling DOF factor 2	[more]
AT3G47500.1	2.5e-67	41.13	cycling DOF factor 3	[more]
AT5G62430.1	6.2e-58	45.05	cycling DOF factor 1	[more]
AT1G69570.1	1.1e-43	35.54	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 66..123 e-value: 2.3E-32 score: 110.9
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 71..107
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 69..123 score: 28.872591
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..67
None	No IPR available	PANTHER	PTHR31089:SF31	CYCLIC DOF FACTOR 1	coord: 42..340
None	No IPR available	PANTHER	PTHR31089	CYCLIC DOF FACTOR 2	coord: 42..340

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g08220.1	Cp4.1LG03g08220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding