Cp4.1LG03g05720 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG03g05720
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Glutamyl-tRNA (Gln) amidotransferase subunit C
Location	Cp4.1LG03: 4554576 .. 4556523 (-)
RNA-Seq Expression	Cp4.1LG03g05720
Synteny	Cp4.1LG03g05720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGTTGCTTGTGTTTACTTTCTCAGTGAGTGTGTAAAGTGGAATGGTTTACATAATGTCTATTTTCTGTATGCTGGCTGGCCATGATTTTGCATTTTGAGACGAGAAAATATATACATGTAATGAAAAATCAAGGTTTTATTGAGAAAAGACAAGCCCAATATGAAACAAGACCTCTTCCATCATCAATCAATATGTTGCTGAAGCAAAAGTCCCTGTAAAACTCACACAATAGCAAAAAGTGATAGCAAATATTGTGGCTACTTGTACTAAAAACAAGCATTAACAGTAAACTGGCAACTCCATTCAATATTGGAATGAGAAATGTTAGATTGATCGTATTTACTACTCTGAAACCATGTGATATGGGAAGTGAGAGCTTGACCTGAATTTAGTGGGGATGCCATTTAGAAAATTGGCTTTGGTTTGATGCTACAAATTTCAGAATCAGATACGAGTGTGTGCTGAAATTAAATACACATGTAAGATTATACACTTGTCAAGTACTGAATTTGAGAGGGCCAACTGGAACACTTGGATTGCAGGCATGTCATTCATTATCTGTAACAGCCCAAGCTCATTGTTAGCAGATATTGTCCTCTTTAGGCCATTTCGGGCTTCCCCTCAAAGTTTTTAAAACGTGTCTACTAGGGAGAGGTTTCCTCACCCTTAAAAATGCTTTGTTCTCCTCCCCAACCGATGTGGGATCTCACAATCTACTCTCCTTCAGGGTTTAGCCTCCTCGCTGACACATCGCCCAGTGTTTGGCTCTAATACCATTTGTAACGGCCCAAACCCACCGCTAGCAGATATTGTCCTCTTTGGACTTTCTTTCTCGAGCTTTCCCTCAAGGTTTTTAAAACGCGTCTGTTAGGGAGAGGTTTCCTCACCCTTATAAAGAATACTGTGTTCTCCTCTCCAATTGACGTGGGATCTCACATTATCACCATGTTTGGATGTCATGTGCAAAAACAACAGTAATGGAGGAAAGGAGAGTAAAGTTTTAGTATTTGTCAGAGAAGGATTATGCCTGTTTCTTAAGCATTAAATTGTTTGAACTTATATGATTTTACATTAACCTTTGTAATCTGCAGTTAAAGACTTGCGCTTCTGCTTATGAGCTGCTGTTATTTTCATATATTATGCAGCATCAAGATCATATTCACGTGATGAGCGCAAACATTATGATCTTTTTGGAAAAGTCCGGCCTGGTGATAAGGAATTCAGGAAAGCCTGGGAAAAACAGATGAAAGAAGAAGAATCTACTCTATGGACAGACAGCGACGATGAAAAAGACGATAAAGAAGCGAAAAAAAATCGCCTTGAAGACGAGATAAGAAAGGTAAGGCAGCAGGCAAAAGAACACTCAGACTTGATTGATGCTGATGATAGTGATGAATTATGGAGTGTTTTGTCAGGAAGCGACGAAGAAAAGACCTTGTGGACTGGTAGTGAAGACGACGACGACGACGATACTCCTACAGAGGCCTACCCGAATGAAAGTAGTGACAAATACATAGATAGACTATTTGAATTCGAGGAAACATCGAAATACCGAACGATTTCGGAGCTATTGAAATCTGAACAGAAACCAGAAGAGTTATCCCCTGGAAAACAAGCCAGGAAAGTAGCAGTGGAGAATGCATTGAAGAAGCTGAAGAAAGGACCGGATGGGCGATATACGAATGTGTGGGAGGTCATGAGTGATGTAGATATCTTAATAGGAGCATTCGAAAACATAGTGTCAGGGCCTGAATATGCAGAGCTGAGGCAGGGAGGGGAGAAGAAACTGAATATGCAATTTTTCAAGGACATACAAGCACGCATGAGAGATCCAAATTTCAAATTCTCACAAGAACTGAAGCTGAAACCAAAGAGCAAAATGGTTTCCCAGAAGAAGTGGCAGAAAGCTCAGTCTAGACGAAGGAAAGCACAGAAGCGATGA

mRNA sequence

ATGAATGTTGCTTGTGTTTACTTTCTCACATCAAGATCATATTCACGTGATGAGCGCAAACATTATGATCTTTTTGGAAAAGTCCGGCCTGGTGATAAGGAATTCAGGAAAGCCTGGGAAAAACAGATGAAAGAAGAAGAATCTACTCTATGGACAGACAGCGACGATGAAAAAGACGATAAAGAAGCGAAAAAAAATCGCCTTGAAGACGAGATAAGAAAGGTAAGGCAGCAGGCAAAAGAACACTCAGACTTGATTGATGCTGATGATAGTGATGAATTATGGAGTGTTTTGTCAGGAAGCGACGAAGAAAAGACCTTGTGGACTGGTAGTGAAGACGACGACGACGACGATACTCCTACAGAGGCCTACCCGAATGAAAGTAGTGACAAATACATAGATAGACTATTTGAATTCGAGGAAACATCGAAATACCGAACGATTTCGGAGCTATTGAAATCTGAACAGAAACCAGAAGAGTTATCCCCTGGAAAACAAGCCAGGAAAGTAGCAGTGGAGAATGCATTGAAGAAGCTGAAGAAAGGACCGGATGGGCGATATACGAATGTGTGGGAGGTCATGAGTGATGTAGATATCTTAATAGGAGCATTCGAAAACATAGTGTCAGGGCCTGAATATGCAGAGCTGAGGCAGGGAGGGGAGAAGAAACTGAATATGCAATTTTTCAAGGACATACAAGCACGCATGAGAGATCCAAATTTCAAATTCTCACAAGAACTGAAGCTGAAACCAAAGAGCAAAATGGTTTCCCAGAAGAAGTGGCAGAAAGCTCAGTCTAGACGAAGGAAAGCACAGAAGCGATGA

Coding sequence (CDS)

ATGAATGTTGCTTGTGTTTACTTTCTCACATCAAGATCATATTCACGTGATGAGCGCAAACATTATGATCTTTTTGGAAAAGTCCGGCCTGGTGATAAGGAATTCAGGAAAGCCTGGGAAAAACAGATGAAAGAAGAAGAATCTACTCTATGGACAGACAGCGACGATGAAAAAGACGATAAAGAAGCGAAAAAAAATCGCCTTGAAGACGAGATAAGAAAGGTAAGGCAGCAGGCAAAAGAACACTCAGACTTGATTGATGCTGATGATAGTGATGAATTATGGAGTGTTTTGTCAGGAAGCGACGAAGAAAAGACCTTGTGGACTGGTAGTGAAGACGACGACGACGACGATACTCCTACAGAGGCCTACCCGAATGAAAGTAGTGACAAATACATAGATAGACTATTTGAATTCGAGGAAACATCGAAATACCGAACGATTTCGGAGCTATTGAAATCTGAACAGAAACCAGAAGAGTTATCCCCTGGAAAACAAGCCAGGAAAGTAGCAGTGGAGAATGCATTGAAGAAGCTGAAGAAAGGACCGGATGGGCGATATACGAATGTGTGGGAGGTCATGAGTGATGTAGATATCTTAATAGGAGCATTCGAAAACATAGTGTCAGGGCCTGAATATGCAGAGCTGAGGCAGGGAGGGGAGAAGAAACTGAATATGCAATTTTTCAAGGACATACAAGCACGCATGAGAGATCCAAATTTCAAATTCTCACAAGAACTGAAGCTGAAACCAAAGAGCAAAATGGTTTCCCAGAAGAAGTGGCAGAAAGCTCAGTCTAGACGAAGGAAAGCACAGAAGCGATGA

Protein sequence

MNVACVYFLTSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMKEEESTLWTDSDDEKDDKEAKKNRLEDEIRKVRQQAKEHSDLIDADDSDELWSVLSGSDEEKTLWTGSEDDDDDDTPTEAYPNESSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRYTNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQELKLKPKSKMVSQKKWQKAQSRRRKAQKR

Homology

[Close]

BLAST of Cp4.1LG03g05720 vs. NCBI nr
Match: KAG7017954.1 (hypothetical protein SDJN02_19820, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 499 bits (1286), Expect = 1.83e-177
Identity = 263/269 (97.77%), Postives = 265/269 (98.51%), Query Frame = 0


Query: 6   VYFLTSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMKEEESTLWTDSDDEKDDKEAKK 65
           +Y+  SRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQM EEESTLWTDSDDEKDDKEAKK
Sbjct: 7   IYYAVSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMNEEESTLWTDSDDEKDDKEAKK 66

Query: 66  NRLEDEIRKVRQQAKEHSDLIDADDSDELWSVLSGSDEEKTLWTGSEDDDDDDTPTEAYP 125
           NRLEDEIRKVRQQAKEHSDLIDADDSDELWSV SGSDEEKTLWTGSEDDDDDDTPTEAYP
Sbjct: 67  NRLEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEDDDDDDTPTEAYP 126

Query: 126 NESSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDG 185
           NESSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDG
Sbjct: 127 NESSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDG 186

Query: 186 RYTNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQ 245
           RYTNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQ
Sbjct: 187 RYTNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQ 246

Query: 246 ELKLKPKSKMVSQKKWQKAQSRRRKAQKR 274
           ELKLKPKSKMVSQKKWQKAQSRRRKAQKR
Sbjct: 247 ELKLKPKSKMVSQKKWQKAQSRRRKAQKR 275

[Close]

BLAST of Cp4.1LG03g05720 vs. NCBI nr
Match: XP_023528329.1 (uncharacterized protein LOC111791283 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 501 bits (1290), Expect = 1.87e-177
Identity = 265/267 (99.25%), Postives = 265/267 (99.25%), Query Frame = 0


Query: 8   FLTSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMKEEESTLWTDSDDEKDDKEAKKNR 67
           F  SRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMKEEESTLWTDSDDEKDDKEAKKNR
Sbjct: 48  FQASRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMKEEESTLWTDSDDEKDDKEAKKNR 107

Query: 68  LEDEIRKVRQQAKEHSDLIDADDSDELWSVLSGSDEEKTLWTGSEDDDDDDTPTEAYPNE 127
           LEDEIRKVRQQAKEHSDLIDADDSDELWSVLSGSDEEKTLWTGSEDDDDDDTPTEAYPNE
Sbjct: 108 LEDEIRKVRQQAKEHSDLIDADDSDELWSVLSGSDEEKTLWTGSEDDDDDDTPTEAYPNE 167

Query: 128 SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY 187
           SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY
Sbjct: 168 SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY 227

Query: 188 TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL 247
           TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL
Sbjct: 228 TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL 287

Query: 248 KLKPKSKMVSQKKWQKAQSRRRKAQKR 274
           KLKPKSKMVSQKKWQKAQSRRRKAQKR
Sbjct: 288 KLKPKSKMVSQKKWQKAQSRRRKAQKR 314

[Close]

BLAST of Cp4.1LG03g05720 vs. NCBI nr
Match: KAG6581221.1 (hypothetical protein SDJN03_21223, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 497 bits (1279), Expect = 8.85e-176
Identity = 263/267 (98.50%), Postives = 263/267 (98.50%), Query Frame = 0


Query: 8   FLTSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMKEEESTLWTDSDDEKDDKEAKKNR 67
           F  SRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQM EEESTLWTDSDDEKDDKEAKKNR
Sbjct: 48  FQVSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMNEEESTLWTDSDDEKDDKEAKKNR 107

Query: 68  LEDEIRKVRQQAKEHSDLIDADDSDELWSVLSGSDEEKTLWTGSEDDDDDDTPTEAYPNE 127
           LEDEIRKVRQQAKEHSDLIDADDSDELWSV SGSDEEKTLWTGSEDDDDDDTPTEAYPNE
Sbjct: 108 LEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEDDDDDDTPTEAYPNE 167

Query: 128 SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY 187
           SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY
Sbjct: 168 SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY 227

Query: 188 TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL 247
           TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL
Sbjct: 228 TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL 287

Query: 248 KLKPKSKMVSQKKWQKAQSRRRKAQKR 274
           KLKPKSKMVSQKKWQKAQSRRRKAQKR
Sbjct: 288 KLKPKSKMVSQKKWQKAQSRRRKAQKR 314

[Close]

BLAST of Cp4.1LG03g05720 vs. NCBI nr
Match: XP_022935143.1 (uncharacterized protein LOC111442102 [Cucurbita moschata])

HSP 1 Score: 494 bits (1271), Expect = 1.46e-174
Identity = 261/267 (97.75%), Postives = 263/267 (98.50%), Query Frame = 0


Query: 8   FLTSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMKEEESTLWTDSDDEKDDKEAKKNR 67
           F  SRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQM EEESTLWTDSD+EKDDKEAKKNR
Sbjct: 48  FQVSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMNEEESTLWTDSDNEKDDKEAKKNR 107

Query: 68  LEDEIRKVRQQAKEHSDLIDADDSDELWSVLSGSDEEKTLWTGSEDDDDDDTPTEAYPNE 127
           LEDEIRKVRQQAKEHSDLIDADDSDELWSV SGSD+EKTLWTGSEDDDDDDTPTEAYPNE
Sbjct: 108 LEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDQEKTLWTGSEDDDDDDTPTEAYPNE 167

Query: 128 SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY 187
           SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY
Sbjct: 168 SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY 227

Query: 188 TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL 247
           TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL
Sbjct: 228 TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL 287

Query: 248 KLKPKSKMVSQKKWQKAQSRRRKAQKR 274
           KLKPKSKMVSQKKWQKAQSRRRKAQKR
Sbjct: 288 KLKPKSKMVSQKKWQKAQSRRRKAQKR 314

[Close]

BLAST of Cp4.1LG03g05720 vs. NCBI nr
Match: XP_022983260.1 (uncharacterized protein LOC111481894 [Cucurbita maxima])

HSP 1 Score: 491 bits (1265), Expect = 1.20e-173
Identity = 258/267 (96.63%), Postives = 263/267 (98.50%), Query Frame = 0


Query: 8   FLTSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMKEEESTLWTDSDDEKDDKEAKKNR 67
           F  SRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQM +E+STLWTDSDDEKDDKEAKKNR
Sbjct: 48  FQVSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMNKEQSTLWTDSDDEKDDKEAKKNR 107

Query: 68  LEDEIRKVRQQAKEHSDLIDADDSDELWSVLSGSDEEKTLWTGSEDDDDDDTPTEAYPNE 127
           LEDEIRKVRQQAKEHSDLIDADDSDELWSV SGSDEEKTLWTGSEDDDDDDTPTEAYPNE
Sbjct: 108 LEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEDDDDDDTPTEAYPNE 167

Query: 128 SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY 187
           SSDKYIDR+FEFEETSKYRTISELLKSEQ+PEELSPGKQARKVAVENALKKLKKGPDGRY
Sbjct: 168 SSDKYIDRIFEFEETSKYRTISELLKSEQEPEELSPGKQARKVAVENALKKLKKGPDGRY 227

Query: 188 TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL 247
           TNVWEVMSD+DILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL
Sbjct: 228 TNVWEVMSDIDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL 287

Query: 248 KLKPKSKMVSQKKWQKAQSRRRKAQKR 274
           KLKPKSKMVSQKKWQKAQSRRRKAQKR
Sbjct: 288 KLKPKSKMVSQKKWQKAQSRRRKAQKR 314

[Close]

BLAST of Cp4.1LG03g05720 vs. ExPASy TrEMBL
Match: A0A6J1F9Q4 (uncharacterized protein LOC111442102 OS=Cucurbita moschata OX=3662 GN=LOC111442102 PE=4 SV=1)

HSP 1 Score: 494 bits (1271), Expect = 7.09e-175
Identity = 261/267 (97.75%), Postives = 263/267 (98.50%), Query Frame = 0


Query: 8   FLTSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMKEEESTLWTDSDDEKDDKEAKKNR 67
           F  SRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQM EEESTLWTDSD+EKDDKEAKKNR
Sbjct: 48  FQVSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMNEEESTLWTDSDNEKDDKEAKKNR 107

Query: 68  LEDEIRKVRQQAKEHSDLIDADDSDELWSVLSGSDEEKTLWTGSEDDDDDDTPTEAYPNE 127
           LEDEIRKVRQQAKEHSDLIDADDSDELWSV SGSD+EKTLWTGSEDDDDDDTPTEAYPNE
Sbjct: 108 LEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDQEKTLWTGSEDDDDDDTPTEAYPNE 167

Query: 128 SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY 187
           SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY
Sbjct: 168 SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY 227

Query: 188 TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL 247
           TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL
Sbjct: 228 TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL 287

Query: 248 KLKPKSKMVSQKKWQKAQSRRRKAQKR 274
           KLKPKSKMVSQKKWQKAQSRRRKAQKR
Sbjct: 288 KLKPKSKMVSQKKWQKAQSRRRKAQKR 314

[Close]

BLAST of Cp4.1LG03g05720 vs. ExPASy TrEMBL
Match: A0A6J1J5D0 (uncharacterized protein LOC111481894 OS=Cucurbita maxima OX=3661 GN=LOC111481894 PE=4 SV=1)

HSP 1 Score: 491 bits (1265), Expect = 5.81e-174
Identity = 258/267 (96.63%), Postives = 263/267 (98.50%), Query Frame = 0


Query: 8   FLTSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMKEEESTLWTDSDDEKDDKEAKKNR 67
           F  SRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQM +E+STLWTDSDDEKDDKEAKKNR
Sbjct: 48  FQVSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMNKEQSTLWTDSDDEKDDKEAKKNR 107

Query: 68  LEDEIRKVRQQAKEHSDLIDADDSDELWSVLSGSDEEKTLWTGSEDDDDDDTPTEAYPNE 127
           LEDEIRKVRQQAKEHSDLIDADDSDELWSV SGSDEEKTLWTGSEDDDDDDTPTEAYPNE
Sbjct: 108 LEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEDDDDDDTPTEAYPNE 167

Query: 128 SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY 187
           SSDKYIDR+FEFEETSKYRTISELLKSEQ+PEELSPGKQARKVAVENALKKLKKGPDGRY
Sbjct: 168 SSDKYIDRIFEFEETSKYRTISELLKSEQEPEELSPGKQARKVAVENALKKLKKGPDGRY 227

Query: 188 TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL 247
           TNVWEVMSD+DILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL
Sbjct: 228 TNVWEVMSDIDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL 287

Query: 248 KLKPKSKMVSQKKWQKAQSRRRKAQKR 274
           KLKPKSKMVSQKKWQKAQSRRRKAQKR
Sbjct: 288 KLKPKSKMVSQKKWQKAQSRRRKAQKR 314

[Close]

BLAST of Cp4.1LG03g05720 vs. ExPASy TrEMBL
Match: A0A1S3C5E2 (uncharacterized protein LOC103496851 OS=Cucumis melo OX=3656 GN=LOC103496851 PE=4 SV=1)

HSP 1 Score: 466 bits (1199), Expect = 6.55e-164
Identity = 244/267 (91.39%), Postives = 254/267 (95.13%), Query Frame = 0


Query: 8   FLTSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMKEEESTLWTDSDDEKDDKEAKKNR 67
           F  SRSYSR ERKHYDLFG VRPGDKEFRKAWEKQM EEESTLWT+SDDE DD+E KKN 
Sbjct: 48  FQASRSYSRGERKHYDLFGNVRPGDKEFRKAWEKQMNEEESTLWTESDDEADDEERKKNH 107

Query: 68  LEDEIRKVRQQAKEHSDLIDADDSDELWSVLSGSDEEKTLWTGSEDDDDDDTPTEAYPNE 127
           LEDEIRK RQQAKEHSDLIDADDSDELWSV SGSDEEKTLWTGSE DDDDD+PTEAYPNE
Sbjct: 108 LEDEIRKTRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEGDDDDDSPTEAYPNE 167

Query: 128 SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY 187
            SDKYIDRLFEFEETSKYRTISELLKSEQ+PEELSPGKQARK+AVENALKKLKKGPDGRY
Sbjct: 168 RSDKYIDRLFEFEETSKYRTISELLKSEQEPEELSPGKQARKLAVENALKKLKKGPDGRY 227

Query: 188 TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL 247
           TNVWEVMSDVDILIGAFEN+VSGPEYAELRQGG+KKLNMQFFKDIQARMRDPNFKFS EL
Sbjct: 228 TNVWEVMSDVDILIGAFENVVSGPEYAELRQGGQKKLNMQFFKDIQARMRDPNFKFSPEL 287

Query: 248 KLKPKSKMVSQKKWQKAQSRRRKAQKR 274
           KLKPKSK++SQK+WQKAQSRRRKAQKR
Sbjct: 288 KLKPKSKLISQKRWQKAQSRRRKAQKR 314

[Close]

BLAST of Cp4.1LG03g05720 vs. ExPASy TrEMBL
Match: A0A6J1CQC9 (uncharacterized protein LOC111013198 OS=Momordica charantia OX=3673 GN=LOC111013198 PE=4 SV=1)

HSP 1 Score: 460 bits (1183), Expect = 1.73e-161
Identity = 242/267 (90.64%), Postives = 255/267 (95.51%), Query Frame = 0


Query: 8   FLTSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMKEEESTLWTDSDDEKDDKEAKKNR 67
           F  SRSYSR ERK YDLFGKV+PGDKEFRKAWEKQM EEESTLWTDS+DE D+KE KK+R
Sbjct: 47  FRVSRSYSRGERKPYDLFGKVKPGDKEFRKAWEKQMNEEESTLWTDSEDEADNKEGKKSR 106

Query: 68  LEDEIRKVRQQAKEHSDLIDADDSDELWSVLSGSDEEKTLWTGSEDDDDDDTPTEAYPNE 127
           LE EI+KVRQQAKEHSDLIDADDSDELWSV SGSDEEKTLWTGSE DDDDD PTEAYPNE
Sbjct: 107 LEHEIKKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEGDDDDDIPTEAYPNE 166

Query: 128 SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY 187
           SSDKYID+LFEFEETSKYRTISELLK+EQ+PEELSPGKQARK+AVENALKKLKKGPDGRY
Sbjct: 167 SSDKYIDKLFEFEETSKYRTISELLKAEQEPEELSPGKQARKLAVENALKKLKKGPDGRY 226

Query: 188 TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL 247
           TNVWEVMSD+DILIGAFENIVSGPEYAELRQGG+KKLNMQFFKDIQARMRDPNFKFS EL
Sbjct: 227 TNVWEVMSDIDILIGAFENIVSGPEYAELRQGGQKKLNMQFFKDIQARMRDPNFKFSPEL 286

Query: 248 KLKPKSKMVSQKKWQKAQSRRRKAQKR 274
           KLKPKSK+V+QKKWQKAQSRRRKAQKR
Sbjct: 287 KLKPKSKLVAQKKWQKAQSRRRKAQKR 313

[Close]

BLAST of Cp4.1LG03g05720 vs. ExPASy TrEMBL
Match: A0A0A0L8W2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G185140 PE=4 SV=1)

HSP 1 Score: 457 bits (1176), Expect = 1.56e-160
Identity = 241/265 (90.94%), Postives = 251/265 (94.72%), Query Frame = 0


Query: 10  TSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMKEEESTLWTDSDDEKDDKEAKKNRLE 69
           +SRSYSR E KHYDLFG VRPGDKEFRKAWEKQM EEESTLWT+SDDE DDKE KKNRLE
Sbjct: 42  SSRSYSRGECKHYDLFGTVRPGDKEFRKAWEKQMNEEESTLWTESDDEADDKEQKKNRLE 101

Query: 70  DEIRKVRQQAKEHSDLIDADDSDELWSVLSGSDEEKTLWTGSEDDDDDDTPTEAYPNESS 129
           DEIRK RQQAKEHSDLIDADDSDELWSV S SDE+KTLWTGSE DDDDD PTEAYPNE S
Sbjct: 102 DEIRKTRQQAKEHSDLIDADDSDELWSVWSESDEDKTLWTGSEGDDDDDIPTEAYPNERS 161

Query: 130 DKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRYTN 189
           DKYID+LFEFEETSKYRTISELLKSEQ+PEELSPGKQARK+AVENALKKLKKGPDGRYTN
Sbjct: 162 DKYIDKLFEFEETSKYRTISELLKSEQEPEELSPGKQARKLAVENALKKLKKGPDGRYTN 221

Query: 190 VWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQELKL 249
           VWEVMSDVDILIGAFEN+VSGPEYAELRQGG+KKLNMQFFKDIQARMRDPNFKFS ELKL
Sbjct: 222 VWEVMSDVDILIGAFENVVSGPEYAELRQGGQKKLNMQFFKDIQARMRDPNFKFSPELKL 281

Query: 250 KPKSKMVSQKKWQKAQSRRRKAQKR 274
           KPKSK+V QK+WQKAQSRRRKAQKR
Sbjct: 282 KPKSKLVPQKRWQKAQSRRRKAQKR 306

[Close]

BLAST of Cp4.1LG03g05720 vs. TAIR 10
Match: AT5G17460.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress. )

HSP 1 Score: 374.8 bits (961), Expect = 6.0e-104
Identity = 199/268 (74.25%), Postives = 230/268 (85.82%), Query Frame = 0


Query: 10  TSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMKEEESTLWTDSDDEKDDK---EAKKN 69
           T+R Y+    K Y+LFG V+PGD +FRK WEK+M E++ TLW+ S+DE +DK   E+ +N
Sbjct: 63  TTRFYASGRGKDYNLFGNVKPGDDDFRKTWEKEM-EDDDTLWSGSEDESNDKTKQESGRN 122

Query: 70  RLEDEIRKVRQQAKEHSDLIDADDSDELWSVLSGSDEEKTLWTGSEDDDDDDTPTEAYPN 129
           RLE EI+K RQQAK+ +D ID DDSDEL+SV SGSDEEKTLWTG E DDDDD PTE  PN
Sbjct: 123 RLEKEIKKARQQAKDSTDQIDGDDSDELYSVWSGSDEEKTLWTGDEGDDDDDIPTEPRPN 182

Query: 130 ESSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGR 189
           E+SDKY+D+LFEFEE  KYRTISELLKSE +PEELSPGK+ARK+AVENALKKL KGPDGR
Sbjct: 183 EASDKYLDKLFEFEEKPKYRTISELLKSENEPEELSPGKKARKLAVENALKKLNKGPDGR 242

Query: 190 YTNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQE 249
           YTNVWEVMSDVDILIGAFENI+SGPEY ELR+GG K+LNMQFFKDIQ RMRDPNFKF+ E
Sbjct: 243 YTNVWEVMSDVDILIGAFENIISGPEYEELRKGGPKRLNMQFFKDIQTRMRDPNFKFTPE 302

Query: 250 LKLKPKSKMVSQKKWQKAQSRRRKAQKR 275
           +KLKPKSK+V +KKWQKAQSR RKA+KR
Sbjct: 303 IKLKPKSKLVPRKKWQKAQSRIRKAKKR 329

[Close]

BLAST of Cp4.1LG03g05720 vs. TAIR 10
Match: AT5G17460.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 372.5 bits (955), Expect = 3.0e-103
Identity = 198/267 (74.16%), Postives = 229/267 (85.77%), Query Frame = 0


Query: 11  SRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMKEEESTLWTDSDDEKDDK---EAKKNR 70
           +R Y+    K Y+LFG V+PGD +FRK WEK+M E++ TLW+ S+DE +DK   E+ +NR
Sbjct: 44  TRFYASGRGKDYNLFGNVKPGDDDFRKTWEKEM-EDDDTLWSGSEDESNDKTKQESGRNR 103

Query: 71  LEDEIRKVRQQAKEHSDLIDADDSDELWSVLSGSDEEKTLWTGSEDDDDDDTPTEAYPNE 130
           LE EI+K RQQAK+ +D ID DDSDEL+SV SGSDEEKTLWTG E DDDDD PTE  PNE
Sbjct: 104 LEKEIKKARQQAKDSTDQIDGDDSDELYSVWSGSDEEKTLWTGDEGDDDDDIPTEPRPNE 163

Query: 131 SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY 190
           +SDKY+D+LFEFEE  KYRTISELLKSE +PEELSPGK+ARK+AVENALKKL KGPDGRY
Sbjct: 164 ASDKYLDKLFEFEEKPKYRTISELLKSENEPEELSPGKKARKLAVENALKKLNKGPDGRY 223

Query: 191 TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL 250
           TNVWEVMSDVDILIGAFENI+SGPEY ELR+GG K+LNMQFFKDIQ RMRDPNFKF+ E+
Sbjct: 224 TNVWEVMSDVDILIGAFENIISGPEYEELRKGGPKRLNMQFFKDIQTRMRDPNFKFTPEI 283

Query: 251 KLKPKSKMVSQKKWQKAQSRRRKAQKR 275
           KLKPKSK+V +KKWQKAQSR RKA+KR
Sbjct: 284 KLKPKSKLVPRKKWQKAQSRIRKAKKR 309

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g05720 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG03g05720 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7017954.1	1.83e-177	97.77	hypothetical protein SDJN02_19820, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023528329.1	1.87e-177	99.25	uncharacterized protein LOC111791283 [Cucurbita pepo subsp. pepo]	[more]
KAG6581221.1	8.85e-176	98.50	hypothetical protein SDJN03_21223, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022935143.1	1.46e-174	97.75	uncharacterized protein LOC111442102 [Cucurbita moschata]	[more]
XP_022983260.1	1.20e-173	96.63	uncharacterized protein LOC111481894 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG03g05720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F9Q4	7.09e-175	97.75	uncharacterized protein LOC111442102 OS=Cucurbita moschata OX=3662 GN=LOC1114421...	[more]
A0A6J1J5D0	5.81e-174	96.63	uncharacterized protein LOC111481894 OS=Cucurbita maxima OX=3661 GN=LOC111481894...	[more]
A0A1S3C5E2	6.55e-164	91.39	uncharacterized protein LOC103496851 OS=Cucumis melo OX=3656 GN=LOC103496851 PE=...	[more]
A0A6J1CQC9	1.73e-161	90.64	uncharacterized protein LOC111013198 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A0A0L8W2	1.56e-160	90.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G185140 PE=4 SV=1	[more]

BLAST of Cp4.1LG03g05720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17460.2	6.0e-104	74.25	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT5G17460.1	3.0e-103	74.16	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 58..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 254..274
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 243..274
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..129
None	No IPR available	PANTHER	PTHR38393	GLUTAMYL-TRNA (GLN) AMIDOTRANSFERASE SUBUNIT C	coord: 6..274

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g05720.1	Cp4.1LG03g05720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:2000214	regulation of proline metabolic process
biological_process	GO:0006413	translational initiation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003743	translation initiation factor activity