Cp4.1LG03g03790 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG03g03790
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Myb family transcription factor family protein
Location	Cp4.1LG03: 2023717 .. 2024202 (+)
RNA-Seq Expression	Cp4.1LG03g03790
Synteny	Cp4.1LG03g03790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAATGGTTTCCCTTTCGCCATCTTCTTCTTCGCTTCAAATTTTCCCATCATCTTCATCGCTGAAAGCCCTTTTACAGACGCTAATTCTCTCTCTAGCCCGAGCCATTTCTCGAGCCAAAACGACGGCGCTTCACATCCTAAAACAGGCCAACCACCAATCCGCCATAGCTTTCAAGAGGAACAAGAACAAGCTCCTCTTCGGCTCCTTCAGACTCCATTACAACTGGTGCTCCTCCTCCAATTATCACGTGGCTCCCCCACCGCTCACGTGGGATGACAACTCCGCCGCCGGCGCCGCCGACCACCTTACTGGGTACTTGCAGTGGCTGGAACACAAAGATAAAGAAGAGGAATTATGTCGGCACGTTAATGAAATTGATAAATTAGCAGATATTTTTATTGCCAGGTGTCATGAGAAATTCAGGCTCGAAAAACAGGAGTCTTACCGGAAATTTCAAGAGATGGCGGCAAGAAGCTTATAA

mRNA sequence

ATGAAAATGGTTTCCCTTTCGCCATCTTCTTCTTCGCTTCAAATTTTCCCATCATCTTCATCGCTGAAAGCCCTTTTACAGACGCTAATTCTCTCTCTAGCCCGAGCCATTTCTCGAGCCAAAACGACGGCGCTTCACATCCTAAAACAGGCCAACCACCAATCCGCCATAGCTTTCAAGAGGAACAAGAACAAGCTCCTCTTCGGCTCCTTCAGACTCCATTACAACTGGTGCTCCTCCTCCAATTATCACGTGGCTCCCCCACCGCTCACGTGGGATGACAACTCCGCCGCCGGCGCCGCCGACCACCTTACTGGGTACTTGCAGTGGCTGGAACACAAAGATAAAGAAGAGGAATTATGTCGGCACGTTAATGAAATTGATAAATTAGCAGATATTTTTATTGCCAGGTGTCATGAGAAATTCAGGCTCGAAAAACAGGAGTCTTACCGGAAATTTCAAGAGATGGCGGCAAGAAGCTTATAA

Coding sequence (CDS)

ATGAAAATGGTTTCCCTTTCGCCATCTTCTTCTTCGCTTCAAATTTTCCCATCATCTTCATCGCTGAAAGCCCTTTTACAGACGCTAATTCTCTCTCTAGCCCGAGCCATTTCTCGAGCCAAAACGACGGCGCTTCACATCCTAAAACAGGCCAACCACCAATCCGCCATAGCTTTCAAGAGGAACAAGAACAAGCTCCTCTTCGGCTCCTTCAGACTCCATTACAACTGGTGCTCCTCCTCCAATTATCACGTGGCTCCCCCACCGCTCACGTGGGATGACAACTCCGCCGCCGGCGCCGCCGACCACCTTACTGGGTACTTGCAGTGGCTGGAACACAAAGATAAAGAAGAGGAATTATGTCGGCACGTTAATGAAATTGATAAATTAGCAGATATTTTTATTGCCAGGTGTCATGAGAAATTCAGGCTCGAAAAACAGGAGTCTTACCGGAAATTTCAAGAGATGGCGGCAAGAAGCTTATAA

Protein sequence

MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKRNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWDDNSAAGAADHLTGYLQWLEHKDKEEELCRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL

Homology

[Close]

BLAST of Cp4.1LG03g03790 vs. NCBI nr
Match: XP_023526429.1 (uncharacterized protein LOC111789933 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 313 bits (803), Expect = 1.36e-107
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFK 60
           MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFK
Sbjct: 1   MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFK 60

Query: 61  RNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWDDNSAAGAADHLTGYLQWLEHKDKEEEL 120
           RNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWDDNSAAGAADHLTGYLQWLEHKDKEEEL
Sbjct: 61  RNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWDDNSAAGAADHLTGYLQWLEHKDKEEEL 120

Query: 121 CRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL 161
           CRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL
Sbjct: 121 CRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL 161

[Close]

BLAST of Cp4.1LG03g03790 vs. NCBI nr
Match: KAG6580813.1 (hypothetical protein SDJN03_20815, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017563.1 hypothetical protein SDJN02_19429, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 303 bits (775), Expect = 2.53e-103
Identity = 156/161 (96.89%), Postives = 158/161 (98.14%), Query Frame = 0


Query: 1   MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFK 60
           MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFK
Sbjct: 1   MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFK 60

Query: 61  RNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWDDNSAAGAADHLTGYLQWLEHKDKEEEL 120
           RNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTW DNSAAGAADHL GYLQWLE +DKEE+L
Sbjct: 61  RNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWGDNSAAGAADHLAGYLQWLEDRDKEEKL 120

Query: 121 CRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL 161
           CRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL
Sbjct: 121 CRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL 161

[Close]

BLAST of Cp4.1LG03g03790 vs. NCBI nr
Match: XP_022935250.1 (uncharacterized protein LOC111442186 [Cucurbita moschata])

HSP 1 Score: 293 bits (751), Expect = 1.04e-99
Identity = 154/161 (95.65%), Postives = 155/161 (96.27%), Query Frame = 0


Query: 1   MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFK 60
           MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFK
Sbjct: 1   MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFK 60

Query: 61  RNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWDDNSAAGAADHLTGYLQWLEHKDKEEEL 120
           RNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTW DNSAA   DHL GYLQWLE +DKEEEL
Sbjct: 61  RNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWGDNSAA---DHLAGYLQWLEDRDKEEEL 120

Query: 121 CRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL 161
           CRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL
Sbjct: 121 CRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL 158

[Close]

BLAST of Cp4.1LG03g03790 vs. NCBI nr
Match: XP_022983138.1 (uncharacterized protein LOC111481779 [Cucurbita maxima])

HSP 1 Score: 292 bits (748), Expect = 3.09e-99
Identity = 154/161 (95.65%), Postives = 156/161 (96.89%), Query Frame = 0


Query: 1   MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFK 60
           MKMVSLSPSSS LQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFK
Sbjct: 1   MKMVSLSPSSS-LQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFK 60

Query: 61  RNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWDDNSAAGAADHLTGYLQWLEHKDKEEEL 120
           RNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWDDNS+ GAADHL GYLQWLE +DKEEEL
Sbjct: 61  RNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWDDNSS-GAADHLAGYLQWLEDRDKEEEL 120

Query: 121 CRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL 161
           CRH NEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL
Sbjct: 121 CRHANEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL 159

[Close]

BLAST of Cp4.1LG03g03790 vs. NCBI nr
Match: XP_038906153.1 (uncharacterized protein LOC120092033 [Benincasa hispida])

HSP 1 Score: 190 bits (483), Expect = 1.27e-58
Identity = 109/164 (66.46%), Postives = 121/164 (73.78%), Query Frame = 0


Query: 11  SSLQIFPSSSS---------LKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKR 70
           SSLQI PSSSS          KA+LQTLILSLARAISRAKTTA HILKQANHQ AIA KR
Sbjct: 12  SSLQILPSSSSPSPSSSLVKFKAVLQTLILSLARAISRAKTTAFHILKQANHQYAIALKR 71

Query: 71  NKNKLLFGSFRLHYNWCS-SSNY---HVAPPPLTWD---DNSAAGAADHLTGYLQWLEHK 130
           NK KLL+GSFRLHYNWCS SSNY   HV PP +TWD        G  D L GYL+WLE +
Sbjct: 72  NKKKLLYGSFRLHYNWCSVSSNYYNSHVTPPVITWDHEYSGGGGGGGDQLGGYLEWLEER 131

Query: 131 DKEEELCRH--VNEIDKLADIFIARCHEKFRLEKQESYRKFQEM 156
           +   ++     VNEIDKLA+IFIAR HEKF+LEKQESYR+FQ+M
Sbjct: 132 ENNNKIKNEEGVNEIDKLAEIFIARSHEKFKLEKQESYRRFQDM 175

[Close]

BLAST of Cp4.1LG03g03790 vs. ExPASy TrEMBL
Match: A0A6J1FA41 (uncharacterized protein LOC111442186 OS=Cucurbita moschata OX=3662 GN=LOC111442186 PE=4 SV=1)

HSP 1 Score: 293 bits (751), Expect = 5.05e-100
Identity = 154/161 (95.65%), Postives = 155/161 (96.27%), Query Frame = 0


Query: 1   MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFK 60
           MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFK
Sbjct: 1   MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFK 60

Query: 61  RNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWDDNSAAGAADHLTGYLQWLEHKDKEEEL 120
           RNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTW DNSAA   DHL GYLQWLE +DKEEEL
Sbjct: 61  RNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWGDNSAA---DHLAGYLQWLEDRDKEEEL 120

Query: 121 CRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL 161
           CRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL
Sbjct: 121 CRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL 158

[Close]

BLAST of Cp4.1LG03g03790 vs. ExPASy TrEMBL
Match: A0A6J1J6X1 (uncharacterized protein LOC111481779 OS=Cucurbita maxima OX=3661 GN=LOC111481779 PE=4 SV=1)

HSP 1 Score: 292 bits (748), Expect = 1.50e-99
Identity = 154/161 (95.65%), Postives = 156/161 (96.89%), Query Frame = 0


Query: 1   MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFK 60
           MKMVSLSPSSS LQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFK
Sbjct: 1   MKMVSLSPSSS-LQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFK 60

Query: 61  RNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWDDNSAAGAADHLTGYLQWLEHKDKEEEL 120
           RNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWDDNS+ GAADHL GYLQWLE +DKEEEL
Sbjct: 61  RNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWDDNSS-GAADHLAGYLQWLEDRDKEEEL 120

Query: 121 CRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL 161
           CRH NEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL
Sbjct: 121 CRHANEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL 159

[Close]

BLAST of Cp4.1LG03g03790 vs. ExPASy TrEMBL
Match: A0A5A7TJT8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G00520 PE=4 SV=1)

HSP 1 Score: 162 bits (411), Expect = 6.11e-48
Identity = 107/178 (60.11%), Postives = 118/178 (66.29%), Query Frame = 0


Query: 7   SPSSSSLQIFPSSSS--------LKALLQTLILSLARAISRAKTTALHILKQANHQSAIA 66
           S SSSSLQ+ PS SS         KALLQTLI SLARAISRAKTTA    + AN    IA
Sbjct: 11  SSSSSSLQVLPSPSSSTLRLAIKFKALLQTLIFSLARAISRAKTTAF---QSAN----IA 70

Query: 67  FKRNKNKLLFGSFRLHYNWCS--SSNY-HVAPPPLTWDDNSAAGAA-DHLTGYLQWLEHK 126
            KRNK KLL+GSFRLHYNWCS  S+ Y HV P  LT+D     GA  D L GYLQWLE +
Sbjct: 71  LKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGIGCGAGGDQLGGYLQWLEER 130

Query: 127 DKE------------EELCRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARS 160
           D              E+    VNEIDKLA+IFIARCHEKF+LEKQESYR+FQ+M ARS
Sbjct: 131 DVNKKSNNNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARS 181

[Close]

BLAST of Cp4.1LG03g03790 vs. ExPASy TrEMBL
Match: A0A1S3B8H1 (uncharacterized protein LOC103487158 OS=Cucumis melo OX=3656 GN=LOC103487158 PE=4 SV=1)

HSP 1 Score: 162 bits (411), Expect = 6.11e-48
Identity = 107/178 (60.11%), Postives = 118/178 (66.29%), Query Frame = 0


Query: 7   SPSSSSLQIFPSSSS--------LKALLQTLILSLARAISRAKTTALHILKQANHQSAIA 66
           S SSSSLQ+ PS SS         KALLQTLI SLARAISRAKTTA    + AN    IA
Sbjct: 11  SSSSSSLQVLPSPSSSTLRLAIKFKALLQTLIFSLARAISRAKTTAF---QSAN----IA 70

Query: 67  FKRNKNKLLFGSFRLHYNWCS--SSNY-HVAPPPLTWDDNSAAGAA-DHLTGYLQWLEHK 126
            KRNK KLL+GSFRLHYNWCS  S+ Y HV P  LT+D     GA  D L GYLQWLE +
Sbjct: 71  LKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGIGCGAGGDQLGGYLQWLEER 130

Query: 127 DKE------------EELCRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARS 160
           D              E+    VNEIDKLA+IFIARCHEKF+LEKQESYR+FQ+M ARS
Sbjct: 131 DVNKKSNNNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARS 181

[Close]

BLAST of Cp4.1LG03g03790 vs. ExPASy TrEMBL
Match: A0A0A0LBV5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G809400 PE=4 SV=1)

HSP 1 Score: 161 bits (407), Expect = 2.12e-47
Identity = 105/178 (58.99%), Postives = 118/178 (66.29%), Query Frame = 0


Query: 7   SPSSSSLQIFPSSSS--------LKALLQTLILSLARAISRAKTTALHILKQANHQSAIA 66
           S SSSSLQ+ PS SS         KALLQTLILSLARAISRAKTTA    + AN     A
Sbjct: 6   SSSSSSLQVLPSPSSSTLRLAIKFKALLQTLILSLARAISRAKTTAF---QSAN----TA 65

Query: 67  FKRNKNKLLFGSFRLHYNWCS--SSNY-HVAPPPLTWDDN--SAAGAADHLTGYLQWLEH 126
            KRNK KLL+GSFRLHYNWCS  S+ Y HV P  LT D       G  D L GYLQWLE 
Sbjct: 66  LKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTCDHGIGGGGGGGDQLGGYLQWLEE 125

Query: 127 KD-----------KEEELCRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARS 160
           +D           +++   + VNEIDKLA+IFIARCHEKF+LEKQESYR+FQ+M ARS
Sbjct: 126 RDVNKKSNHNSNVEDDHEDQSVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARS 176

[Close]

BLAST of Cp4.1LG03g03790 vs. TAIR 10
Match: AT3G57950.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42180.1); Has 81 Blast hits to 81 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 109.0 bits (271), Expect = 3.6e-24
Identity = 81/185 (43.78%), Postives = 102/185 (55.14%), Query Frame = 0


Query: 1   MKMVSLSPSSSSLQIFPSSSSLKALLQTL----ILSLARAISRAKTTALHILKQANHQS- 60
           M++ S SPSSSS     SS  LK L+Q L    +    RA+++AK+  L I K  ++   
Sbjct: 1   MQLKSSSPSSSS-SSSSSSMKLKTLIQNLLTHPLYRFLRALAKAKSIFLEISKHNSNNKK 60

Query: 61  -------AIAFKRNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWD-----DNSAAGAADH 120
                       +N+ K+ FGSFRLHYNWCSS   HV P P  +       N        
Sbjct: 61  RKLMMLFPTKASKNQRKIFFGSFRLHYNWCSS---HVVPVPQPFPFPSSYINGEEEDDSQ 120

Query: 121 LTGYLQWLEHK--DKEEELCRHV-----NEIDKLADIFIARCHEKFRLEKQESYRKFQEM 162
           L+GYL+WLEHK  D  EE+   V     ++ID LAD+FIA CHEKF LEK ESYR+FQEM
Sbjct: 121 LSGYLEWLEHKKFDDVEEIGDVVADGGDDDIDHLADMFIANCHEKFLLEKVESYRRFQEM 180

[Close]

BLAST of Cp4.1LG03g03790 vs. TAIR 10
Match: AT5G06790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible, petal differentiation and expansion stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 96.3 bits (238), Expect = 2.4e-20
Identity = 82/198 (41.41%), Postives = 103/198 (52.02%), Query Frame = 0


Query: 5   SLSPSSSSLQIFPSSSS--LKALLQTLILS----LARAISRAKTTALHIL--KQANHQSA 64
           S+S S  S    P+SSS  LK+L+QTLI+S    L R ISR  +  + +L  KQ N  S 
Sbjct: 11  SMSSSQCSSSSSPTSSSMKLKSLIQTLIISQVCRLLREISRVSSILVRVLRKKQYNFLSV 70

Query: 65  IAF-------KRNKNKLLFGSFRLHYNWCSSSNYHVAPP--------------PLTWDDN 124
            +        K+ KN +LFGSFRLHYN+CSS    V+ P                TW+  
Sbjct: 71  SSLLYPKRVSKKQKNNILFGSFRLHYNFCSSHVVPVSAPVRLPEELYLAHLVHESTWESM 130

Query: 125 SAAGAAD----------HLTGYLQWLEHKDK---EEELCRHVNEIDKLADIFIARCHEKF 161
            +  + D           L+ YL+ LE K K   EEE    +NEIDKLAD FIA CHEKF
Sbjct: 131 YSTESMDGRDDDDQEPSQLSSYLRQLEDKVKDGQEEETETMMNEIDKLADRFIANCHEKF 190

[Close]

BLAST of Cp4.1LG03g03790 vs. TAIR 10
Match: AT2G42180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 63.5 bits (153), Expect = 1.7e-10
Identity = 69/184 (37.50%), Postives = 89/184 (48.37%), Query Frame = 0


Query: 4   VSLSPSSSSLQIFPSSSSLKALLQTLI----LSLARAISRAKTTALHILKQANHQSAIAF 63
           + L  SSSS      S++LK L   LI      L R++SRA++  + I            
Sbjct: 1   MQLKRSSSS----SHSTNLKTLFINLITHSLYRLLRSLSRARSVLIEI-----------S 60

Query: 64  KRNKNKLLFGSFRLHYNWCSSSNYH---------VAP--PPLTWDDNSAAGAADHL-TGY 123
           K NK +L    F   Y   SS N H         V P   P  +  +      D+L + Y
Sbjct: 61  KHNKKRLFMMMF---YTTKSSMNQHNIFFGSSHVVVPVTKPFPFSLDGHVEDEDNLESQY 120

Query: 124 LQWLEHK--------DKEEELCRHV--NEIDKLADIFIARCHEKFRLEKQESYRKFQEMA 162
           LQWLE +        D +    R V  ++ID+LAD FIARCHEKF LEK ESYR+FQ+M 
Sbjct: 121 LQWLEERVDENNNINDDQSVGERDVGDDDIDRLADKFIARCHEKFLLEKVESYRRFQDML 166

[Close]

BLAST of Cp4.1LG03g03790 vs. TAIR 10
Match: AT5G47920.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 2.4e-04
Identity = 20/46 (43.48%), Postives = 35/46 (76.09%), Query Frame = 0


Query: 114 KDKEEELCRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAAR 160
           K++E E  +  +EID +AD+FI+R H++ +L+K  S++++QEM AR
Sbjct: 140 KEEEGENFKLEDEIDHVADLFISRFHKQMKLQKLLSFKRYQEMLAR 185

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g03790 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG03g03790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023526429.1	1.36e-107	100.00	uncharacterized protein LOC111789933 [Cucurbita pepo subsp. pepo]	[more]
KAG6580813.1	2.53e-103	96.89	hypothetical protein SDJN03_20815, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022935250.1	1.04e-99	95.65	uncharacterized protein LOC111442186 [Cucurbita moschata]	[more]
XP_022983138.1	3.09e-99	95.65	uncharacterized protein LOC111481779 [Cucurbita maxima]	[more]
XP_038906153.1	1.27e-58	66.46	uncharacterized protein LOC120092033 [Benincasa hispida]	[more]

BLAST of Cp4.1LG03g03790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FA41	5.05e-100	95.65	uncharacterized protein LOC111442186 OS=Cucurbita moschata OX=3662 GN=LOC1114421...	[more]
A0A6J1J6X1	1.50e-99	95.65	uncharacterized protein LOC111481779 OS=Cucurbita maxima OX=3661 GN=LOC111481779...	[more]
A0A5A7TJT8	6.11e-48	60.11	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3B8H1	6.11e-48	60.11	uncharacterized protein LOC103487158 OS=Cucumis melo OX=3656 GN=LOC103487158 PE=...	[more]
A0A0A0LBV5	2.12e-47	58.99	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G809400 PE=4 SV=1	[more]

BLAST of Cp4.1LG03g03790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57950.1	3.6e-24	43.78	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G06790.1	2.4e-20	41.41	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G42180.1	1.7e-10	37.50	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G47920.1	2.4e-04	43.48	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008480	Protein of unknown function DUF761, plant	PFAM	PF05553	DUF761	coord: 125..159 e-value: 4.3E-14 score: 51.8
None	No IPR available	PANTHER	PTHR33450:SF4	DUF761 DOMAIN PROTEIN	coord: 3..161
None	No IPR available	PANTHER	PTHR33450	EMB\|CAB67623.1-RELATED	coord: 3..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g03790.1	Cp4.1LG03g03790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding