Cp4.1LG03g02590 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG03g02590
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	transcription factor AS1-like
Location	Cp4.1LG03: 582265 .. 582873 (+)
RNA-Seq Expression	Cp4.1LG03g02590
Synteny	Cp4.1LG03g02590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACTTCCAATGGGGGATTTCTTCAAACGGATTCATCCACTCCGCCACCGTCTCTTCCTCCTTGGCTTTCGAACTCCAGCGGCGGTTCTTCGCTCCGACCGCCTTCCCCATCGGTTACCTTAACACTGTCGTCCCCCACAGTTCCAGCCTACTCTCCCATCCCTTGGCTGCAACAGCCAGAGAGAATCCCAGAAAACATGCCTCTTGTGTTGGGCAATTTGGCACCTCATATGTCAATGGCATCATGTGGTGGAAGCCTGTTTGCTTCGGAGCTTGTGGAATGCTGCCGAGAGCTGGATGAAGGGCACCGTGCTTGGGCAGCGCACAAGAAGGAAACGGCGTGGAGGTTAAGACGACAAGAGTTGCAATTGGAGTCGGAGAAGGCGTCCCGGATTCGTGTAAAGATGGAGGAGGTTGAAGGGAAAGTGAAGGCTCTTAGAGAAGAAGAGAAGGTTGGTTTGGAGAGGATTGAAGCAGAGTATAAGGAACAATTGGCAGGGTTGAGAAAGGATGCAGAGGCCAAAGAACAAAAGTTGGCTGAGCAATGGGCTGCTAAACACTCGAGCCTCACTAAGTTTCTTGAGCATATGGGTTGCAGGACTTGA

mRNA sequence

ATGGCCACTTCCAATGGGGGATTTCTTCAAACGGATTCATCCACTCCGCCACCGTCTCTTCCTCCTTGGCTTTCGAACTCCAGCGGCGGTTCTTCGCTCCGACCGCCTTCCCCATCGGTTACCTTAACACTGTCGTCCCCCACAGTTCCAGCCTACTCTCCCATCCCTTGGCTGCAACAGCCAGAGAGAATCCCAGAAAACATGCCTCTTGTGTTGGGCAATTTGGCACCTCATATGTCAATGGCATCATGTGGTGGAAGCCTGTTTGCTTCGGAGCTTGTGGAATGCTGCCGAGAGCTGGATGAAGGGCACCGTGCTTGGGCAGCGCACAAGAAGGAAACGGCGTGGAGGTTAAGACGACAAGAGTTGCAATTGGAGTCGGAGAAGGCGTCCCGGATTCGTGTAAAGATGGAGGAGGTTGAAGGGAAAGTGAAGGCTCTTAGAGAAGAAGAGAAGGTTGGTTTGGAGAGGATTGAAGCAGAGTATAAGGAACAATTGGCAGGGTTGAGAAAGGATGCAGAGGCCAAAGAACAAAAGTTGGCTGAGCAATGGGCTGCTAAACACTCGAGCCTCACTAAGTTTCTTGAGCATATGGGTTGCAGGACTTGA

Coding sequence (CDS)

ATGGCCACTTCCAATGGGGGATTTCTTCAAACGGATTCATCCACTCCGCCACCGTCTCTTCCTCCTTGGCTTTCGAACTCCAGCGGCGGTTCTTCGCTCCGACCGCCTTCCCCATCGGTTACCTTAACACTGTCGTCCCCCACAGTTCCAGCCTACTCTCCCATCCCTTGGCTGCAACAGCCAGAGAGAATCCCAGAAAACATGCCTCTTGTGTTGGGCAATTTGGCACCTCATATGTCAATGGCATCATGTGGTGGAAGCCTGTTTGCTTCGGAGCTTGTGGAATGCTGCCGAGAGCTGGATGAAGGGCACCGTGCTTGGGCAGCGCACAAGAAGGAAACGGCGTGGAGGTTAAGACGACAAGAGTTGCAATTGGAGTCGGAGAAGGCGTCCCGGATTCGTGTAAAGATGGAGGAGGTTGAAGGGAAAGTGAAGGCTCTTAGAGAAGAAGAGAAGGTTGGTTTGGAGAGGATTGAAGCAGAGTATAAGGAACAATTGGCAGGGTTGAGAAAGGATGCAGAGGCCAAAGAACAAAAGTTGGCTGAGCAATGGGCTGCTAAACACTCGAGCCTCACTAAGTTTCTTGAGCATATGGGTTGCAGGACTTGA

Protein sequence

MATSNGGFLQTDSSTPPPSLPPWLSNSSGGSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQPERIPENMPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRRQELQLESEKASRIRVKMEEVEGKVKALREEEKVGLERIEAEYKEQLAGLRKDAEAKEQKLAEQWAAKHSSLTKFLEHMGCRT

Homology

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BLAST of Cp4.1LG03g02590 vs. ExPASy Swiss-Prot
Match: O80931 (Transcription factor AS1 OS=Arabidopsis thaliana OX=3702 GN=AS1 PE=1 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.0e-56
Identity = 132/211 (62.56%), Postives = 158/211 (74.88%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPS--LPPWLSNSSGGSSLRPPSPSVTLTLSSPTVPAYS---PI 60
           MA SNGGFL ++    PP+  +PPWL+ S+ G+++    PSVTLTLS  TV A +   PI
Sbjct: 156 MANSNGGFLHSEQQVQPPNPVIPPWLATSNNGNNVVARPPSVTLTLSPSTVAAAAPQPPI 215

Query: 61  PWL--QQPERIPENMP--LVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHK 120
           PWL  QQPER  EN P  LVLG++ P  S +S   S+F SELVECCREL+EGHRAWA HK
Sbjct: 216 PWLQQQQPER-AENGPGGLVLGSMMPSCSGSS--ESVFLSELVECCRELEEGHRAWADHK 275

Query: 121 KETAWRLRRQELQLESEKASRIRVKMEEVEGKVKALREEEKVGLERIEAEYKEQLAGLRK 180
           KE AWRLRR ELQLESEK  R R KMEE+E K+KALREE+K  +E+IE EY+EQL GLR+
Sbjct: 276 KEAAWRLRRLELQLESEKTCRQREKMEEIEAKMKALREEQKNAMEKIEGEYREQLVGLRR 335

Query: 181 DAEAKEQKLAEQWAAKHSSLTKFLE-HMGCR 202
           DAEAK+QKLA+QW ++H  LTKFLE  MGCR
Sbjct: 336 DAEAKDQKLADQWTSRHIRLTKFLEQQMGCR 363

[Close]

BLAST of Cp4.1LG03g02590 vs. ExPASy Swiss-Prot
Match: Q94IB1 (Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RS2 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.4e-38
Identity = 95/188 (50.53%), Postives = 123/188 (65.43%), Query Frame = 0


Query: 18  PSLPPWLSNSSGGSSLRPPSPSVTLTLSSPTV---PAYSPIPWLQQPERIPENMPLVLGN 77
           P LPPW+S+S   SS    SPSVTL+L+S  V   PA  P  W                 
Sbjct: 163 PILPPWMSSSPSSSS----SPSVTLSLASAAVAPAPAAPPPTW----------------- 222

Query: 78  LAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRRQELQLESEKASRIR 137
                     GG +  +EL+ECCRE++EG RAWAAH+KE AWR++R E+QLE+E+A R R
Sbjct: 223 ------GGGGGGEVVVAELMECCREMEEGQRAWAAHRKEAAWRMKRVEMQLETERACRRR 282

Query: 138 VKMEEVEGKVKALREEEKVGLERIEAEYKEQLAGLRKDAEAKEQKLAEQWAAKHSSLTKF 197
              EE E K++ALREE+   +ER+EAEY+E++AGLR+DAEAKEQK+AEQWAAKH+ L KF
Sbjct: 283 EATEEFEAKMRALREEQAAAVERVEAEYREKMAGLRRDAEAKEQKMAEQWAAKHARLAKF 323

Query: 198 LEHM-GCR 202
           L+ +  CR
Sbjct: 343 LDQVAACR 323

[Close]

BLAST of Cp4.1LG03g02590 vs. ExPASy Swiss-Prot
Match: Q9S7B2 (Protein rough sheath 2 OS=Zea mays OX=4577 GN=RS2 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.2e-34
Identity = 92/199 (46.23%), Postives = 123/199 (61.81%), Query Frame = 0


Query: 18  PSLPPWLSNSSGGSSL----------RPPSPSVTLTLSSPTVPAYSPIPWLQQPERIPEN 77
           P LPPWLS+++G ++           RPPSPSVTL+L+S  V    P P    P+R   +
Sbjct: 160 PVLPPWLSSNAGPAAAAAAAVAHPPPRPPSPSVTLSLASAAVAPGPPAPAPWMPDRAAAD 219

Query: 78  -------MPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 137
                   P   G  AP   MA   G   A EL ECCREL+EG RAWAAH++E AWRL+R
Sbjct: 220 AAPYGFPSPSQHGGAAP-PGMAVVDGQALA-ELAECCRELEEGRRAWAAHRREAAWRLKR 279

Query: 138 QELQLESEKASRIRVKMEEVEGKVKALREEEKVGLERIEAEYKEQLAGLRKDAEAKEQKL 197
            E QLE E+  R R   EE E K++ +R E+    ER+E +++E++A LR+DA+ KE+K+
Sbjct: 280 VEQQLEMEREMRRREVWEEFEAKMRTMRLEQAAAAERVERDHREKVAELRRDAQVKEEKM 339

Query: 198 AEQWAAKHSSLTKFLEHMG 200
           AEQWAAKH+ + KF+E MG
Sbjct: 340 AEQWAAKHARVAKFVEQMG 356

[Close]

BLAST of Cp4.1LG03g02590 vs. NCBI nr
Match: XP_023528628.1 (transcription factor AS1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 386 bits (991), Expect = 6.60e-135
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSSGGSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSSGGSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSSGGSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  PERIPENMPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120
           PERIPENMPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR
Sbjct: 61  PERIPENMPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRVKMEEVEGKVKALREEEKVGLERIEAEYKEQLAGLRKDAEAKEQKL 180
           QELQLESEKASRIRVKMEEVEGKVKALREEEKVGLERIEAEYKEQLAGLRKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRVKMEEVEGKVKALREEEKVGLERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AEQWAAKHSSLTKFLEHMGCRT 202
           AEQWAAKHSSLTKFLEHMGCRT
Sbjct: 181 AEQWAAKHSSLTKFLEHMGCRT 202

[Close]

BLAST of Cp4.1LG03g02590 vs. NCBI nr
Match: KAG6580540.1 (Transcription factor AS1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017292.1 Transcription factor AS1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 379 bits (974), Expect = 2.58e-132
Identity = 199/202 (98.51%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSSGGSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNS+GGSSLRPPSPSVTLTLSSPTVPAYS IPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYSTIPWLQQ 60

Query: 61  PERIPENMPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120
           PERIPENMPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR
Sbjct: 61  PERIPENMPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRVKMEEVEGKVKALREEEKVGLERIEAEYKEQLAGLRKDAEAKEQKL 180
           QELQLESEKASRIR KMEEVEGKVKALREEEKVGLERIEAEYKEQLAGLRKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKVGLERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AEQWAAKHSSLTKFLEHMGCRT 202
           AEQWAAKHSSLTKFLEHMGCRT
Sbjct: 181 AEQWAAKHSSLTKFLEHMGCRT 202

[Close]

BLAST of Cp4.1LG03g02590 vs. NCBI nr
Match: XP_022934855.1 (transcription factor AS1-like [Cucurbita moschata])

HSP 1 Score: 379 bits (973), Expect = 3.66e-132
Identity = 199/202 (98.51%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSSGGSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNS+GGSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  PERIPENMPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120
           PERIPENMPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR
Sbjct: 61  PERIPENMPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRVKMEEVEGKVKALREEEKVGLERIEAEYKEQLAGLRKDAEAKEQKL 180
           QELQLESEKASRIR KMEEVEGKVKALREEEKV LERIEAEYKEQLAGLRKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKVCLERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AEQWAAKHSSLTKFLEHMGCRT 202
           AEQWAAKHSSLTKFLEHMGCRT
Sbjct: 181 AEQWAAKHSSLTKFLEHMGCRT 202

[Close]

BLAST of Cp4.1LG03g02590 vs. NCBI nr
Match: XP_022982614.1 (transcription factor AS1-like [Cucurbita maxima] >XP_022982615.1 transcription factor AS1-like [Cucurbita maxima])

HSP 1 Score: 374 bits (961), Expect = 3.29e-130
Identity = 196/202 (97.03%), Postives = 198/202 (98.02%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSSGGSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNS+GGS LRPPSPSVTLTLSSPTVPAYSPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSLLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  PERIPENMPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120
           PERIPENMPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR
Sbjct: 61  PERIPENMPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRVKMEEVEGKVKALREEEKVGLERIEAEYKEQLAGLRKDAEAKEQKL 180
           QELQLESEKASRIR KMEEVEGKVKALREEEK GLERIEAEYKEQLAGLRKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKSGLERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AEQWAAKHSSLTKFLEHMGCRT 202
           A+QWAAKH SLTKFLEHMGCRT
Sbjct: 181 ADQWAAKHLSLTKFLEHMGCRT 202

[Close]

BLAST of Cp4.1LG03g02590 vs. NCBI nr
Match: XP_038903104.1 (transcription factor AS1-like [Benincasa hispida] >XP_038903105.1 transcription factor AS1-like [Benincasa hispida])

HSP 1 Score: 370 bits (951), Expect = 1.10e-128
Identity = 194/202 (96.04%), Postives = 197/202 (97.52%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSSGGSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNS+GGSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  PERIPENMPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120
           PERIPENMPLVLGNLAP MSM SCGGSLFASELVECCREL+EGHRAWAAHKKETAWRLRR
Sbjct: 61  PERIPENMPLVLGNLAPQMSMPSCGGSLFASELVECCRELNEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRVKMEEVEGKVKALREEEKVGLERIEAEYKEQLAGLRKDAEAKEQKL 180
           QELQLESEKASRIR KMEEVEGKVKALREEEK+ LERIEAEYKEQLAGLRKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AEQWAAKHSSLTKFLEHMGCRT 202
           AEQWAAKH SLTKFLEHMGCRT
Sbjct: 181 AEQWAAKHLSLTKFLEHMGCRT 202

[Close]

BLAST of Cp4.1LG03g02590 vs. ExPASy TrEMBL
Match: A0A6J1F8X8 (transcription factor AS1-like OS=Cucurbita moschata OX=3662 GN=LOC111441895 PE=4 SV=1)

HSP 1 Score: 379 bits (973), Expect = 1.77e-132
Identity = 199/202 (98.51%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSSGGSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNS+GGSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  PERIPENMPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120
           PERIPENMPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR
Sbjct: 61  PERIPENMPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRVKMEEVEGKVKALREEEKVGLERIEAEYKEQLAGLRKDAEAKEQKL 180
           QELQLESEKASRIR KMEEVEGKVKALREEEKV LERIEAEYKEQLAGLRKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKVCLERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AEQWAAKHSSLTKFLEHMGCRT 202
           AEQWAAKHSSLTKFLEHMGCRT
Sbjct: 181 AEQWAAKHSSLTKFLEHMGCRT 202

[Close]

BLAST of Cp4.1LG03g02590 vs. ExPASy TrEMBL
Match: A0A6J1J530 (transcription factor AS1-like OS=Cucurbita maxima OX=3661 GN=LOC111481437 PE=4 SV=1)

HSP 1 Score: 374 bits (961), Expect = 1.59e-130
Identity = 196/202 (97.03%), Postives = 198/202 (98.02%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSSGGSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNS+GGS LRPPSPSVTLTLSSPTVPAYSPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSLLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  PERIPENMPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120
           PERIPENMPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR
Sbjct: 61  PERIPENMPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRVKMEEVEGKVKALREEEKVGLERIEAEYKEQLAGLRKDAEAKEQKL 180
           QELQLESEKASRIR KMEEVEGKVKALREEEK GLERIEAEYKEQLAGLRKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKSGLERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AEQWAAKHSSLTKFLEHMGCRT 202
           A+QWAAKH SLTKFLEHMGCRT
Sbjct: 181 ADQWAAKHLSLTKFLEHMGCRT 202

[Close]

BLAST of Cp4.1LG03g02590 vs. ExPASy TrEMBL
Match: A0A5D3DN74 (Transcription factor AS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001650 PE=4 SV=1)

HSP 1 Score: 366 bits (940), Expect = 2.53e-127
Identity = 190/202 (94.06%), Postives = 196/202 (97.03%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSSGGSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNS+GGSSLRPPSPSVTLTLSSPTVPAY+PIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60

Query: 61  PERIPENMPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120
           P+R+PEN+PLVLGNLAP MSM SCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR
Sbjct: 61  PDRMPENIPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRVKMEEVEGKVKALREEEKVGLERIEAEYKEQLAGLRKDAEAKEQKL 180
           QELQLESEKASRIR KMEEVEGKVKALREEEK+ LERIEAEYKEQLAG RKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180

Query: 181 AEQWAAKHSSLTKFLEHMGCRT 202
           AEQWAAKH SLTKFLEHMGCRT
Sbjct: 181 AEQWAAKHMSLTKFLEHMGCRT 202

[Close]

BLAST of Cp4.1LG03g02590 vs. ExPASy TrEMBL
Match: A0A1S3B5G1 (transcription factor AS1 OS=Cucumis melo OX=3656 GN=LOC103486384 PE=4 SV=1)

HSP 1 Score: 366 bits (940), Expect = 2.53e-127
Identity = 190/202 (94.06%), Postives = 196/202 (97.03%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSSGGSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNS+GGSSLRPPSPSVTLTLSSPTVPAY+PIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60

Query: 61  PERIPENMPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120
           P+R+PEN+PLVLGNLAP MSM SCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR
Sbjct: 61  PDRMPENIPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRVKMEEVEGKVKALREEEKVGLERIEAEYKEQLAGLRKDAEAKEQKL 180
           QELQLESEKASRIR KMEEVEGKVKALREEEK+ LERIEAEYKEQLAG RKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180

Query: 181 AEQWAAKHSSLTKFLEHMGCRT 202
           AEQWAAKH SLTKFLEHMGCRT
Sbjct: 181 AEQWAAKHMSLTKFLEHMGCRT 202

[Close]

BLAST of Cp4.1LG03g02590 vs. ExPASy TrEMBL
Match: A0A0A0LAJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734210 PE=4 SV=1)

HSP 1 Score: 366 bits (939), Expect = 3.59e-127
Identity = 190/202 (94.06%), Postives = 196/202 (97.03%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSSGGSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60
           MATSNGGFLQTDSST PPSLPPWLSNS+GGSSLRPPSPSVTLTLSSPTVPAY+PIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTSPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60

Query: 61  PERIPENMPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120
           P+R+PENMPLVLGNLAP MSM SCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR
Sbjct: 61  PDRMPENMPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRVKMEEVEGKVKALREEEKVGLERIEAEYKEQLAGLRKDAEAKEQKL 180
           QELQLESEKASRIR+KMEEVEGKVKALREEEK+ LERIEAEYKEQLAG RKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRLKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180

Query: 181 AEQWAAKHSSLTKFLEHMGCRT 202
           AEQWAAKH SLTKFLEHMGCRT
Sbjct: 181 AEQWAAKHMSLTKFLEHMGCRT 202

[Close]

BLAST of Cp4.1LG03g02590 vs. TAIR 10
Match: AT2G37630.1 (myb-like HTH transcriptional regulator family protein )

HSP 1 Score: 220.3 bits (560), Expect = 1.4e-57
Identity = 132/211 (62.56%), Postives = 158/211 (74.88%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPS--LPPWLSNSSGGSSLRPPSPSVTLTLSSPTVPAYS---PI 60
           MA SNGGFL ++    PP+  +PPWL+ S+ G+++    PSVTLTLS  TV A +   PI
Sbjct: 156 MANSNGGFLHSEQQVQPPNPVIPPWLATSNNGNNVVARPPSVTLTLSPSTVAAAAPQPPI 215

Query: 61  PWL--QQPERIPENMP--LVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHK 120
           PWL  QQPER  EN P  LVLG++ P  S +S   S+F SELVECCREL+EGHRAWA HK
Sbjct: 216 PWLQQQQPER-AENGPGGLVLGSMMPSCSGSS--ESVFLSELVECCRELEEGHRAWADHK 275

Query: 121 KETAWRLRRQELQLESEKASRIRVKMEEVEGKVKALREEEKVGLERIEAEYKEQLAGLRK 180
           KE AWRLRR ELQLESEK  R R KMEE+E K+KALREE+K  +E+IE EY+EQL GLR+
Sbjct: 276 KEAAWRLRRLELQLESEKTCRQREKMEEIEAKMKALREEQKNAMEKIEGEYREQLVGLRR 335

Query: 181 DAEAKEQKLAEQWAAKHSSLTKFLE-HMGCR 202
           DAEAK+QKLA+QW ++H  LTKFLE  MGCR
Sbjct: 336 DAEAKDQKLADQWTSRHIRLTKFLEQQMGCR 363

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g02590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80931	2.0e-56	62.56	Transcription factor AS1 OS=Arabidopsis thaliana OX=3702 GN=AS1 PE=1 SV=1	[more]
Q94IB1	2.4e-38	50.53	Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RS2 P...	[more]
Q9S7B2	1.2e-34	46.23	Protein rough sheath 2 OS=Zea mays OX=4577 GN=RS2 PE=1 SV=1	[more]

BLAST of Cp4.1LG03g02590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023528628.1	6.60e-135	100.00	transcription factor AS1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6580540.1	2.58e-132	98.51	Transcription factor AS1, partial [Cucurbita argyrosperma subsp. sororia] >KAG70...	[more]
XP_022934855.1	3.66e-132	98.51	transcription factor AS1-like [Cucurbita moschata]	[more]
XP_022982614.1	3.29e-130	97.03	transcription factor AS1-like [Cucurbita maxima] >XP_022982615.1 transcription f...	[more]
XP_038903104.1	1.10e-128	96.04	transcription factor AS1-like [Benincasa hispida] >XP_038903105.1 transcription ...	[more]

BLAST of Cp4.1LG03g02590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F8X8	1.77e-132	98.51	transcription factor AS1-like OS=Cucurbita moschata OX=3662 GN=LOC111441895 PE=4...	[more]
A0A6J1J530	1.59e-130	97.03	transcription factor AS1-like OS=Cucurbita maxima OX=3661 GN=LOC111481437 PE=4 S...	[more]
A0A5D3DN74	2.53e-127	94.06	Transcription factor AS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3B5G1	2.53e-127	94.06	transcription factor AS1 OS=Cucumis melo OX=3656 GN=LOC103486384 PE=4 SV=1	[more]
A0A0A0LAJ9	3.59e-127	94.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734210 PE=4 SV=1	[more]

BLAST of Cp4.1LG03g02590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37630.1	1.4e-57	62.56	myb-like HTH transcriptional regulator family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 159..183
None	No IPR available	COILS	Coil	Coil	coord: 130..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..42
None	No IPR available	PANTHER	PTHR47214	PROTEIN ROUGH SHEATH 2 HOMOLOG	coord: 18..201
IPR031055	Protein rough sheath 2 /ASYMMETRIC LEAVES1	PANTHER	PTHR47214:SF3	TRANSCRIPTION FACTOR AS1	coord: 18..201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g02590.1	Cp4.1LG03g02590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010338	leaf formation
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005634	nucleus