Cp4.1LG03g02480 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG03g02480
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionHeat shock protein DnaJ, cysteine-rich domain containing protein
LocationCp4.1LG03: 542127 .. 543656 (+)
RNA-Seq ExpressionCp4.1LG03g02480
SyntenyCp4.1LG03g02480
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTTGTTTGGTATAAGAGATGTTGGTTCACATGTCTTGCAACTTTTTGAACTTTGTGTGTCGCCATGTGCGGATTCCTTCCGAGTCATGTCATCTGCGGCAGTTGTAAGCTATGATTGTTGGATTTTTGTGTTAATATCTAAACGGAAATGACAAAAAGGCATAAGCAGATGAAGATGAACCCCAAGGAGTGGGCTTTCTAATTCGGAAGCGGAGGTTCTTTGCATAATGCATGATCGAAGGCTGGCTTTTCTCTCATGTCTTCTACCATCTGGATCTTGTGGGTGACAAGTGTCTACACACTGCACATTCCACTGGAAACTGCATAGGTTGCTTGGCGCCTCTGTTTTTTTTTACTCTATGTAGCTAATATCTTTTTATATGTATCATATTTGATTGAGTAACATTTGACGCCTCGGTGTCCATTTTGAAAGGACAAAATTAGAAGGGAGTTAGTCACTAAGAAATTCATATGGTGGGCCATTCTTATCTACACAACAATCAGAACCTGAAGTCCAATACAGCCTTATCCAGATTTCATTCAACTTCAAGTCATCCCTCCATCCTTTCCAACCACCAAATTACAAAAACTCTGTCCTTGATCTTCGTCCCCCCTGTATTCAGATTCAGTTTCAGTCCTCTGCAAAACATGGCATCCTTGTGTACATTTCCACGTATTTCTTCCACAGAACCCATCAAGCAAACGCCCGCCGCCGCCCCTTTTCCGCCCTCCAATCAGCCGATGAGACCCTCGGCGTTGTCCCTCCGCCAAAGCAGCAGCAAGCACCGGAGAATTTCTACAGTGGTCGCCGCCATTGGAGACGTCTCCGCCGATGGCACCACCTACTTGATCGCCGGCGCTGTAGCTGTGGCTCTTGTAGGAACCGCCTTCCCTATCCTCTTCTCTCGCAAAGACCTGTAAGTAAAATTTCTAGTACTTCTATAGCCATCTATTTCTGCATTGAAATTAAATTAACAAATGCGATTGAAAGAATACTTCACCATAAATTTTCCCCTTTTCTCTGCAGTGGAATTCTGTTCTGCTTCTGTTATTGTCTTTTACTCTTAATTACAGTTTCAGTCTCACGACATTAATTAAACAAACTACCCATCTGCAATGCTTTAAGAGGGAGCTTTAATTTAAATTTCAATGGTTGAGGTTTTAATTGCGGCGGCGGTTTTTGTGGTCTGGTCTACCGTAGGTGTCCGGAATGCGACGGCGCAGGGTTTGTCCGGCGATCGGGAGCGGCGCTGAGGGCTAATGCGGCTCGCAAAGACCAAACTCAGATCGTTTGTGCTCGTTGCAATGGCCTTGGCAAGCTCAACCAAGTGGACAAATAAATTCCATACTTTATTAATGCTGTAATAATCTATTTTTAATATATTTTAGTATGGAAATGTAATATTTGTTTTTAACCTAACATTTGAATTCGAATTAGTTTTTTTTTTTTTTTAATTATGCTTTGACCGATATATTATATTTAACGTTAAATGACATTATTAATGAGGTCATTAAATAATACTACAATA

mRNA sequence

GTTTTGTTTGGTATAAGAGATGTTGGTTCACATGTCTTGCAACTTTTTGAACTTTGTGTGTCGCCATGTGCGGATTCCTTCCGAGTCATGTCATCTGCGGCAGTTGTAAGCTATGATTGTTGGATTTTTGTGTTAATATCTAAACGGAAATGACAAAAAGGCATAAGCAGATGAAGATGAACCCCAAGGAGTGGGCTTTCTAATTCGGAAGCGGAGGTTCTTTGCATAATGCATGATCGAAGGCTGGCTTTTCTCTCATGTCTTCTACCATCTGGATCTTGTGGGTGACAAGTGTCTACACACTGCACATTCCACTGGAAACTGCATAGGTTGCTTGGCGCCTCTGTTTTTTTTTACTCTATGTAGCTAATATCTTTTTATATGTATCATATTTGATTGAGTAACATTTGACGCCTCGGTGTCCATTTTGAAAGGACAAAATTAGAAGGGAGTTAGTCACTAAGAAATTCATATGGTGGGCCATTCTTATCTACACAACAATCAGAACCTGAAGTCCAATACAGCCTTATCCAGATTTCATTCAACTTCAAGTCATCCCTCCATCCTTTCCAACCACCAAATTACAAAAACTCTGTCCTTGATCTTCGTCCCCCCTGTATTCAGATTCAGTTTCAGTCCTCTGCAAAACATGGCATCCTTGTGTACATTTCCACGTATTTCTTCCACAGAACCCATCAAGCAAACGCCCGCCGCCGCCCCTTTTCCGCCCTCCAATCAGCCGATGAGACCCTCGGCGTTGTCCCTCCGCCAAAGCAGCAGCAAGCACCGGAGAATTTCTACAGTGGTCGCCGCCATTGGAGACGTCTCCGCCGATGGCACCACCTACTTGATCGCCGGCGCTGTAGCTGTGGCTCTTGTAGGAACCGCCTTCCCTATCCTCTTCTCTCGCAAAGACCTGTGTCCGGAATGCGACGGCGCAGGGTTTGTCCGGCGATCGGGAGCGGCGCTGAGGGCTAATGCGGCTCGCAAAGACCAAACTCAGATCGTTTGTGCTCGTTGCAATGGCCTTGGCAAGCTCAACCAAGTGGACAAATAAATTCCATACTTTATTAATGCTGTAATAATCTATTTTTAATATATTTTAGTATGGAAATGTAATATTTGTTTTTAACCTAACATTTGAATTCGAATTAGTTTTTTTTTTTTTTTAATTATGCTTTGACCGATATATTATATTTAACGTTAAATGACATTATTAATGAGGTCATTAAATAATACTACAATA

Coding sequence (CDS)

ATGGTGGGCCATTCTTATCTACACAACAATCAGAACCTGAAGTCCAATACAGCCTTATCCAGATTTCATTCAACTTCAAGTCATCCCTCCATCCTTTCCAACCACCAAATTACAAAAACTCTGTCCTTGATCTTCGTCCCCCCTGTATTCAGATTCAGTTTCAGTCCTCTGCAAAACATGGCATCCTTGTGTACATTTCCACGTATTTCTTCCACAGAACCCATCAAGCAAACGCCCGCCGCCGCCCCTTTTCCGCCCTCCAATCAGCCGATGAGACCCTCGGCGTTGTCCCTCCGCCAAAGCAGCAGCAAGCACCGGAGAATTTCTACAGTGGTCGCCGCCATTGGAGACGTCTCCGCCGATGGCACCACCTACTTGATCGCCGGCGCTGTAGCTGTGGCTCTTGTAGGAACCGCCTTCCCTATCCTCTTCTCTCGCAAAGACCTGTGTCCGGAATGCGACGGCGCAGGGTTTGTCCGGCGATCGGGAGCGGCGCTGAGGGCTAATGCGGCTCGCAAAGACCAAACTCAGATCGTTTGTGCTCGTTGCAATGGCCTTGGCAAGCTCAACCAAGTGGACAAATAA

Protein sequence

MVGHSYLHNNQNLKSNTALSRFHSTSSHPSILSNHQITKTLSLIFVPPVFRFSFSPLQNMASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIVCARCNGLGKLNQVDK
Homology
[Close]
BLAST of Cp4.1LG03g02480 vs. NCBI nr
Match: XP_023528629.1 (uncharacterized protein LOC111791489 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 377 bits (969), Expect = 8.11e-132
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0 

Query: 1   MVGHSYLHNNQNLKSNTALSRFHSTSSHPSILSNHQITKTLSLIFVPPVFRFSFSPLQNM 60
           MVGHSYLHNNQNLKSNTALSRFHSTSSHPSILSNHQITKTLSLIFVPPVFRFSFSPLQNM
Sbjct: 1   MVGHSYLHNNQNLKSNTALSRFHSTSSHPSILSNHQITKTLSLIFVPPVFRFSFSPLQNM 60

Query: 61  ASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSA 120
           ASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSA
Sbjct: 61  ASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSA 120

Query: 121 DGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIVC 180
           DGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIVC
Sbjct: 121 DGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIVC 180

Query: 181 ARCNGLGKLNQVDK 194
           ARCNGLGKLNQVDK
Sbjct: 181 ARCNGLGKLNQVDK 194

[Close]
BLAST of Cp4.1LG03g02480 vs. NCBI nr
Match: XP_022935020.1 (uncharacterized protein LOC111442008 [Cucurbita moschata] >XP_022935021.1 uncharacterized protein LOC111442008 [Cucurbita moschata] >KAG6580531.1 hypothetical protein SDJN03_20533, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017282.1 hypothetical protein SDJN02_19145 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 263 bits (672), Expect = 1.95e-87
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0 

Query: 60  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS 119
           MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS
Sbjct: 1   MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS 60

Query: 120 ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 179
           ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV
Sbjct: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120

Query: 180 CARCNGLGKLNQVDK 194
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]
BLAST of Cp4.1LG03g02480 vs. NCBI nr
Match: XP_022983996.1 (uncharacterized protein LOC111482446 [Cucurbita maxima])

HSP 1 Score: 256 bits (654), Expect = 1.08e-84
Identity = 131/135 (97.04%), Postives = 132/135 (97.78%), Query Frame = 0 

Query: 60  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS 119
           MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSS KH R STVVAA+GDVS
Sbjct: 1   MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSGKHWRTSTVVAAVGDVS 60

Query: 120 ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 179
           ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV
Sbjct: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120

Query: 180 CARCNGLGKLNQVDK 194
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]
BLAST of Cp4.1LG03g02480 vs. NCBI nr
Match: XP_038905250.1 (uncharacterized protein LOC120091333 [Benincasa hispida])

HSP 1 Score: 243 bits (621), Expect = 1.15e-79
Identity = 124/135 (91.85%), Postives = 128/135 (94.81%), Query Frame = 0 

Query: 60  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS 119
           MASLC+FPRISSTEPIKQ P AAPFP SN P+RPSALSLRQ S KH+RIS VVAA+GDVS
Sbjct: 1   MASLCSFPRISSTEPIKQPPTAAPFPSSNHPIRPSALSLRQISPKHKRISVVVAAVGDVS 60

Query: 120 ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 179
           ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV
Sbjct: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120

Query: 180 CARCNGLGKLNQVDK 194
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]
BLAST of Cp4.1LG03g02480 vs. NCBI nr
Match: XP_008442527.1 (PREDICTED: uncharacterized protein LOC103486375 [Cucumis melo])

HSP 1 Score: 242 bits (618), Expect = 3.28e-79
Identity = 120/135 (88.89%), Postives = 129/135 (95.56%), Query Frame = 0 

Query: 60  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS 119
           MASLC+FPRISSTEPIKQ+PA APFPPSN P+RPS LSLRQSS  H+RISTVVAA+GDVS
Sbjct: 1   MASLCSFPRISSTEPIKQSPATAPFPPSNHPIRPSTLSLRQSSRNHKRISTVVAAVGDVS 60

Query: 120 ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 179
           +DGTTYLIAGA+AVALVGTAFPI FSRKDLCPEC+GAGFVRRSG+ALRANAARKDQTQIV
Sbjct: 61  SDGTTYLIAGAIAVALVGTAFPIFFSRKDLCPECEGAGFVRRSGSALRANAARKDQTQIV 120

Query: 180 CARCNGLGKLNQVDK 194
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]
BLAST of Cp4.1LG03g02480 vs. ExPASy TrEMBL
Match: A0A6J1F9E5 (uncharacterized protein LOC111442008 OS=Cucurbita moschata OX=3662 GN=LOC111442008 PE=4 SV=1)

HSP 1 Score: 263 bits (672), Expect = 9.45e-88
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0 

Query: 60  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS 119
           MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS
Sbjct: 1   MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS 60

Query: 120 ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 179
           ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV
Sbjct: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120

Query: 180 CARCNGLGKLNQVDK 194
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]
BLAST of Cp4.1LG03g02480 vs. ExPASy TrEMBL
Match: A0A6J1J3Y5 (uncharacterized protein LOC111482446 OS=Cucurbita maxima OX=3661 GN=LOC111482446 PE=4 SV=1)

HSP 1 Score: 256 bits (654), Expect = 5.22e-85
Identity = 131/135 (97.04%), Postives = 132/135 (97.78%), Query Frame = 0 

Query: 60  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS 119
           MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSS KH R STVVAA+GDVS
Sbjct: 1   MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSGKHWRTSTVVAAVGDVS 60

Query: 120 ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 179
           ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV
Sbjct: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120

Query: 180 CARCNGLGKLNQVDK 194
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]
BLAST of Cp4.1LG03g02480 vs. ExPASy TrEMBL
Match: A0A1S3B5E7 (uncharacterized protein LOC103486375 OS=Cucumis melo OX=3656 GN=LOC103486375 PE=4 SV=1)

HSP 1 Score: 242 bits (618), Expect = 1.59e-79
Identity = 120/135 (88.89%), Postives = 129/135 (95.56%), Query Frame = 0 

Query: 60  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS 119
           MASLC+FPRISSTEPIKQ+PA APFPPSN P+RPS LSLRQSS  H+RISTVVAA+GDVS
Sbjct: 1   MASLCSFPRISSTEPIKQSPATAPFPPSNHPIRPSTLSLRQSSRNHKRISTVVAAVGDVS 60

Query: 120 ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 179
           +DGTTYLIAGA+AVALVGTAFPI FSRKDLCPEC+GAGFVRRSG+ALRANAARKDQTQIV
Sbjct: 61  SDGTTYLIAGAIAVALVGTAFPIFFSRKDLCPECEGAGFVRRSGSALRANAARKDQTQIV 120

Query: 180 CARCNGLGKLNQVDK 194
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]
BLAST of Cp4.1LG03g02480 vs. ExPASy TrEMBL
Match: A0A0A0LDN8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734100 PE=4 SV=1)

HSP 1 Score: 238 bits (607), Expect = 7.51e-78
Identity = 119/135 (88.15%), Postives = 128/135 (94.81%), Query Frame = 0 

Query: 60  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS 119
           MASLC+FPRISSTEPIKQ+PA APFPPSN  ++PS LSLRQSS  H+RISTVVAA+GDVS
Sbjct: 1   MASLCSFPRISSTEPIKQSPAVAPFPPSNHSIKPSTLSLRQSSRNHKRISTVVAAVGDVS 60

Query: 120 ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 179
           +DGTTYLIAGA+AVALVGTAFPILFSRKDLCPECDGAGFVRRS +ALRANAARKDQTQIV
Sbjct: 61  SDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFVRRSESALRANAARKDQTQIV 120

Query: 180 CARCNGLGKLNQVDK 194
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]
BLAST of Cp4.1LG03g02480 vs. ExPASy TrEMBL
Match: A0A6J1I3R1 (uncharacterized protein LOC111470276 OS=Cucurbita maxima OX=3661 GN=LOC111470276 PE=4 SV=1)

HSP 1 Score: 228 bits (582), Expect = 4.65e-74
Identity = 118/135 (87.41%), Postives = 124/135 (91.85%), Query Frame = 0 

Query: 60  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS 119
           MASLC+FPRISS +PIK  PAAAPFPPSN P RPSALSLRQSS   +R ST+VAAIGDVS
Sbjct: 1   MASLCSFPRISSADPIKH-PAAAPFPPSNHPKRPSALSLRQSSRNQKRTSTIVAAIGDVS 60

Query: 120 ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 179
           ADGTTYLIAGAVAVALVGTAFPILFSRKDLCP CDGAGFVR+SGAALRANAARKDQ QIV
Sbjct: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPVCDGAGFVRKSGAALRANAARKDQAQIV 120

Query: 180 CARCNGLGKLNQVDK 194
           C+RCNGLGKLNQVDK
Sbjct: 121 CSRCNGLGKLNQVDK 134

[Close]
BLAST of Cp4.1LG03g02480 vs. TAIR 10
Match: AT5G02160.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 145.2 bits (365), Expect = 5.5e-35
Identity = 73/102 (71.57%), Postives = 81/102 (79.41%), Query Frame = 0 

Query: 93  PSALSLRQSSSKHRRISTVVAAIGDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPE 152
           PS  ++    +K    S VVAA+GDVS+DGT YLI GA+AVALVGTAFPILF RKD CPE
Sbjct: 27  PSPNNVILPKNKRSSSSVVVAAVGDVSSDGTIYLIGGAIAVALVGTAFPILFKRKDTCPE 86

Query: 153 CDGAGFVRRSGAALRANAARKDQTQIVCARCNGLGKLNQVDK 195
           CDGAGFVR+ G  LRANAARKD  QIVCA CNGLGKLNQ+DK
Sbjct: 87  CDGAGFVRKGGVTLRANAARKDLPQIVCANCNGLGKLNQIDK 128

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g02480 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG03g02480 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023528629.18.11e-132100.00uncharacterized protein LOC111791489 [Cucurbita pepo subsp. pepo][more]
XP_022935020.11.95e-87100.00uncharacterized protein LOC111442008 [Cucurbita moschata] >XP_022935021.1 unchar... [more]
XP_022983996.11.08e-8497.04uncharacterized protein LOC111482446 [Cucurbita maxima][more]
XP_038905250.11.15e-7991.85uncharacterized protein LOC120091333 [Benincasa hispida][more]
XP_008442527.13.28e-7988.89PREDICTED: uncharacterized protein LOC103486375 [Cucumis melo][more]
BLAST of Cp4.1LG03g02480 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1F9E59.45e-88100.00uncharacterized protein LOC111442008 OS=Cucurbita moschata OX=3662 GN=LOC1114420... [more]
A0A6J1J3Y55.22e-8597.04uncharacterized protein LOC111482446 OS=Cucurbita maxima OX=3661 GN=LOC111482446... [more]
A0A1S3B5E71.59e-7988.89uncharacterized protein LOC103486375 OS=Cucumis melo OX=3656 GN=LOC103486375 PE=... [more]
A0A0A0LDN87.51e-7888.15Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734100 PE=4 SV=1[more]
A0A6J1I3R14.65e-7487.41uncharacterized protein LOC111470276 OS=Cucurbita maxima OX=3661 GN=LOC111470276... [more]
BLAST of Cp4.1LG03g02480 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G02160.15.5e-3571.57unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..95
NoneNo IPR availablePANTHERPTHR36389OS05G0110100 PROTEINcoord: 60..194

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g02480.1Cp4.1LG03g02480.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046274 lignin catabolic process
biological_process GO:0006508 proteolysis
cellular_component GO:0048046 apoplast
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0005507 copper ion binding
molecular_function GO:0052716 hydroquinone:oxygen oxidoreductase activity