Cp4.1LG03g02340 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG03g02340
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionUnknown protein
LocationCp4.1LG03: 618721 .. 622716 (+)
RNA-Seq ExpressionCp4.1LG03g02340
SyntenyCp4.1LG03g02340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCCAAATGCCAATGGCGTCGTATGACAGCCATGTGATGCAAATTCGCAAGAGCAATCGTACATTCTTGTTCTCTCTATAATTTAAGTTTTTTTATAGTTTCTTCCTTGTCCATTCTTGTTCGTCGATTTCTTCGGTTTAATTATTTCACTTCGTCCTGAATTCTCCTTTTGATATCGCCGGATTTGACTCTTCGTCGTATCTCTCAAGCTCCGAACTGACCCCCTCCCCTTTCTCCTGGTACATTATTGCACTTCATGCTTTCAGATTCAACCATGGCTCAACAGGTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCACGTGAAAATTCGGAGTGCTTCATTTTCCCTAATCGAGCGTTGGATTTCGGAATGTAGGAAGATGGATGGCCATTAGGCTTGCGGCTTATGAACACCAGAGTTGGATTGGCGGGAAATCATGATCTCTCGGCCTCGGTTTCTTTCAATACTTTGCGCACTCATTCTCCTAGTTCCTTCACCGACTCTTCCTCAGATCTTGATACAGAGGTCTGTTACTTCAATTAGTTCCTCTTTTTTTTTTCTTTTTTTCTGTTCTTCTTTTGCCTGTGTAACTGTGTATGCGTTAGAGAGGCTGAAAATTTAGCACATTATGCTTGATTATAGAAGAATTCCTTTTCTTTCATGCTCTCGTTCGATCATGCAAATACATTGCGTTGGGTTAGTCTCAAAAACTTCAAAATCTCTGGCATTGTCTTTTTGGCCCTGTTTTTGCTAAATTCCATCAGGCAATTGGTTTTTAGTCAACTGGATCATTCTACCATGACAAGAGCATCACGCTTGGGAGTCTCATTGGAGTCTCTAGCCTTCTGGAGCTGTCGCGAAGATCGACCAAAGGAAACGGAGTGGAAATACTCAAAGACAAAAAGAAGTACAAGTCCAAGCCATGGTTGTTTTCTTTATCTTTATGCATTAAACTCCGCCCTGATGCTGTGAGCTTGAGCAGTTCTCCTTCACTTGAACACTCTCTTGAAGCAGAAAGGAGAGCTCACAACCCGACCATGTATGGACCCAATGATTACTCGCCTGTTCGTCCTGTTTCTGGAACAAACTCTCTGTTTTCCAGTGATCAAGTTGCTCCCGTGCAGCCATTTGCACCGGCGATCACAGAGGAAAGCAGAAGATCAATTGGAGAACTTGCTGAAGATGGTTACTGTCAAGGGATTCCTCCACTATTTTCATGTCTATATTGCCAACTCATCAAATAATTCTTTCTTTCATTCCTATAATAACTTTGAATGCATTGTTTCACTACAACCTTTTCTTCATGGACAAATGATGCATGTCAAAAGTTATATGGTCATTTCTTTCATTCTACCATTTGGGTTGTGGGAGACTTATCACCATTGAGCCATTGTGTTTGGATCAGACAAATCAATGTATTCTCAGCTGCTACGTTCAGTCTGTTTACTGCCAAGTTAGTGAACCACTTTAAGTGACAGCCATGGTTAGCTTATTAACTGTTAGCATATGATAGAAGAAAAAACTTCAAATGGTCCTATGGATGCCTTTAGAAACTGTTTACTGCATATAATAAGCTGAGTAATGCAAGCAGGTTCTTCGATGTTTAGAATCAAACATCAATATCTACGGAAATCAAATCGACGCCAGTAAGAAAAAATAGCNTGGTTGCACCTTTTCTTATGCACTGGCATTACAATATGTAATAATGTATGTTGTTGGTCCCACTTCCCCAGTTTGGAGGATCGTTTGGTTGTTGCGAAGTGATGTTACTTTCTTGGATGCCTGCTATACAGCACTTTATCATTATTCCTCAGTCGGTGCAGGCCATTGGTTTAGTGATAAACTCTTCTGTTCGAGCTCGAGCTGGATTTGTGGCCCATTGTCTGAAAAGGAAATTGGTTCTGCGGATGAAGCAATTAACTTACCATAACGTGGGACCTTCATAAATGTTTCATCATGTTGGGAGCTGAATTTTTCACAATTTTGGATGGAAATTGAGATTTAGAATAGGTGTAGCAATGACTAAAAATAGTGTGATGCCGATTAAGCTTTGATTTTCATTTTGGGTTACTGCAACTCTCAACTTTCTCCATTATTCTAATGGTTTTTGTACTCATTTTTGAAACATTTATATGAGTTAGAGAGTAATATTGTGATTTTTGACATAATAGAGTTAGTCTTTAAATAAAGGTAAAATTCATAAATATTTAATCTAATAATAATAATAATAATAATAATAATATACTAATAAAAATAAGTTTTATGCAATAAAATGTACTAATAAAAACACTTTCGTAGAGACTAATTTGAAAAAAAATCAATAATAAACTAGTAACAATTTTATGATTCACATATTAAATTACCATGAAAAAAAATTGGAATTAATAAATTAACGTAAATAGTAATACCGATAAAAGGGTGTTTTGGACATATTGGGTGTTGATAAACCAAAATGACGACAAGAAGCCCTTGGCGAGTGGCAGAAGAAGAAATAAAGGAGGGTATAATAGTAATTGCGCGAAAAGAAAATAGAATTTGGGAGTTTCCTTCTCTGGCCCTCCACTGGTCGTTAGTCCAGCTTCAAATCGGACGGCAGTAGGAAATTATTCTCTCACGTCATTTCCTTCCGCCAGCTCCCATGTCTGCTACACAGAAACTGCAATTCCTCCACAGTTCAAATTGACTGAGGCTGATATTTGCAGGGCCAAATGCCAATGGCGTCGTATGACAGCCATGTGATGCAAATTCGCAAGAGCAATCGTACATTCTTGTTCTCTCTATAATTTAAGTTTTTTTATAGTTTCTTCCTTGTCCATTCTTGTTCGTCGATTTCTTCGGTTTAATTATTTCACTTCGTCCTGAATTCTCCTTTTGATATCGCCGGATTTGACTCTTCGTCGTATCTCTCAAGCTCCGAACTGACCCCCTCCCCTTTCTCCTGGTACATTATTGCACTTCATGCTTTCAGATTCAACCATGGCTCAACAGGTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCACGTGAAAATTCGGAGTGCTTCATTTTCCCTAATCGAGCGTTGGATTTCGGAATGTAGGAAGATGGATGGCCATTAGGCTTGCGGCTTATGAACACCAGAGTTGGATTGGCGGGAAATCATGATCTCTCGGCCTCGGTTTCTTTCAATACTTTGCGCACTCATTCTCCTAGTTCCTTCACCGACTCTTCCTCAGATCTTGATACAGAGGTCTGTTACTTCAATTAGTTCCTCTTTTTTTTTTCTTTTTTTCTGTTCTTCTTTTGCCTGTGTAACTGTGTATGCGTTAGAGAGGCTGAAAATTTAGCACATTATGCTTGATTATAGAAGAATTCCTTTTCTTTCATGCTCTCGTTCGATCATGCAAATACATTGCGTTGGGTTAGTCTCAAAAACTTCAAAATCTCTGGCATTGTCTTTTTGGCCCTGTTTTTGCTAAATTCCATCAGGCAATTGGTTTTTAGTCAACTGGATCATTCTACCATGACAAGAGCATCACGCTTGGGAGTCTCATTGGAGTCTCTAGCCTTCTGGAGCTGTCGCGAAGATCGACCAAAGGAAACGGAGTGGAAATACTCAAAGACAAAAAGAAGTACAAGTCCAAGCCATGGTTGTTTTCTTTATCTTTATGCATTAAACTCCGCCCTGATGCTGTGAGCTTGAGCAGTTCTCCTTCACTTGAACACTCTCTTGAAGCAGAAAGGAGAGCTCACAACCCGACCATGTATGGACCCAATGATTACTCGCCTGTTCGTCCTGTTTCTGGAACAAACTCTCTGTTTTCCAGTGATCAAGTTGCTCCCGTGCAGCCATTTGCACCGGCGATCACAGAGGAAAGCAGAAGATCAATTGGAGAACTTGCTGAAGATGGTTACTGTCAAGGGATTCCTCCACTATTTTCATGTCTATATTGCCAACTCATCAAATAA

mRNA sequence

GGCCAAATGCCAATGGCGTCGTATGACAGCCATGTGATGCAAATTCGCAAGAGCAATCATTCAACCATGGCTCAACAGGAAGATGGATGGCCATTAGGCTTGCGGCTTATGAACACCAGAGTTGGATTGGCGGGAAATCATGATCTCTCGGCCTCGGTTTCTTTCAATACTTTGCGCACTCATTCTCCTAGTTCCTTCACCGACTCTTCCTCAGATCTTGATACAGAGTCAACTGGATCATTCTACCATGACAAGAGCATCACGCTTGGGAGTCTCATTGGAGTCTCTAGCCTTCTGGAGCTGTCGCGAAGATCGACCAAAGGAAACGGAGTGGAAATACTCAAAGACAAAAAGAAGTACAAGTCCAAGCCATGGTTGTTTTCTTTATCTTTATGCATTAAACTCCGCCCTGATGCTGTGAGCTTGAGCAGTTCTCCTTCACTTGAACACTCTCTTGAAGCAGAAAGGAGAGCTCACAACCCGACCATGTATGGACCCAATGATTACTCGCCTGTTCGTCCTGTTTCTGGAACAAACTCTCTGTTTTCCAGTGATCAAGTTGCTCCCGTGCAGCCATTTGCACCGGCGATCACAGAGGAAAGCAGAAGATCAATTGGAGAACTTGCTGAAGATGGTTACTGTCAAGGGATTCCTCCACTATTTTCATATTCAACCATGGCTCAACAGGAAGATGGATGGCCATTAGGCTTGCGGCTTATGAACACCAGAGTTGGATTGGCGGGAAATCATGATCTCTCGGCCTCGGTTTCTTTCAATACTTTGCGCACTCATTCTCCTAGTTCCTTCACCGACTCTTCCTCAGATCTTGATACAGAGTCAACTGGATCATTCTACCATGACAAGAGCATCACGCTTGGGAGTCTCATTGGAGTCTCTAGCCTTCTGGAGCTGTCGCGAAGATCGACCAAAGGAAACGGAGTGGAAATACTCAAAGACAAAAAGAAGTACAAGTCCAAGCCATGGTTGTTTTCTTTATCTTTATGCATTAAACTCCGCCCTGATGCTGTGAGCTTGAGCAGTTCTCCTTCACTTGAACACTCTCTTGAAGCAGAAAGGAGAGCTCACAACCCGACCATGTATGGACCCAATGATTACTCGCCTGTTCGTCCTGTTTCTGGAACAAACTCTCTGTTTTCCAGTGATCAAGTTGCTCCCGTGCAGCCATTTGCACCGGCGATCACAGAGGAAAGCAGAAGATCAATTGGAGAACTTGCTGAAGATGGTTACTGTCAAGGGATTCCTCCACTATTTTCATGTCTATATTGCCAACTCATCAAATAA

Coding sequence (CDS)

GGCCAAATGCCAATGGCGTCGTATGACAGCCATGTGATGCAAATTCGCAAGAGCAATCATTCAACCATGGCTCAACAGGAAGATGGATGGCCATTAGGCTTGCGGCTTATGAACACCAGAGTTGGATTGGCGGGAAATCATGATCTCTCGGCCTCGGTTTCTTTCAATACTTTGCGCACTCATTCTCCTAGTTCCTTCACCGACTCTTCCTCAGATCTTGATACAGAGTCAACTGGATCATTCTACCATGACAAGAGCATCACGCTTGGGAGTCTCATTGGAGTCTCTAGCCTTCTGGAGCTGTCGCGAAGATCGACCAAAGGAAACGGAGTGGAAATACTCAAAGACAAAAAGAAGTACAAGTCCAAGCCATGGTTGTTTTCTTTATCTTTATGCATTAAACTCCGCCCTGATGCTGTGAGCTTGAGCAGTTCTCCTTCACTTGAACACTCTCTTGAAGCAGAAAGGAGAGCTCACAACCCGACCATGTATGGACCCAATGATTACTCGCCTGTTCGTCCTGTTTCTGGAACAAACTCTCTGTTTTCCAGTGATCAAGTTGCTCCCGTGCAGCCATTTGCACCGGCGATCACAGAGGAAAGCAGAAGATCAATTGGAGAACTTGCTGAAGATGGTTACTGTCAAGGGATTCCTCCACTATTTTCATATTCAACCATGGCTCAACAGGAAGATGGATGGCCATTAGGCTTGCGGCTTATGAACACCAGAGTTGGATTGGCGGGAAATCATGATCTCTCGGCCTCGGTTTCTTTCAATACTTTGCGCACTCATTCTCCTAGTTCCTTCACCGACTCTTCCTCAGATCTTGATACAGAGTCAACTGGATCATTCTACCATGACAAGAGCATCACGCTTGGGAGTCTCATTGGAGTCTCTAGCCTTCTGGAGCTGTCGCGAAGATCGACCAAAGGAAACGGAGTGGAAATACTCAAAGACAAAAAGAAGTACAAGTCCAAGCCATGGTTGTTTTCTTTATCTTTATGCATTAAACTCCGCCCTGATGCTGTGAGCTTGAGCAGTTCTCCTTCACTTGAACACTCTCTTGAAGCAGAAAGGAGAGCTCACAACCCGACCATGTATGGACCCAATGATTACTCGCCTGTTCGTCCTGTTTCTGGAACAAACTCTCTGTTTTCCAGTGATCAAGTTGCTCCCGTGCAGCCATTTGCACCGGCGATCACAGAGGAAAGCAGAAGATCAATTGGAGAACTTGCTGAAGATGGTTACTGTCAAGGGATTCCTCCACTATTTTCATGTCTATATTGCCAACTCATCAAATAA

Protein sequence

GQMPMASYDSHVMQIRKSNHSTMAQQEDGWPLGLRLMNTRVGLAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTESTGSFYHDKSITLGSLIGVSSLLELSRRSTKGNGVEILKDKKKYKSKPWLFSLSLCIKLRPDAVSLSSSPSLEHSLEAERRAHNPTMYGPNDYSPVRPVSGTNSLFSSDQVAPVQPFAPAITEESRRSIGELAEDGYCQGIPPLFSYSTMAQQEDGWPLGLRLMNTRVGLAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTESTGSFYHDKSITLGSLIGVSSLLELSRRSTKGNGVEILKDKKKYKSKPWLFSLSLCIKLRPDAVSLSSSPSLEHSLEAERRAHNPTMYGPNDYSPVRPVSGTNSLFSSDQVAPVQPFAPAITEESRRSIGELAEDGYCQGIPPLFSCLYCQLIK
Homology
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BLAST of Cp4.1LG03g02340 vs. ExPASy Swiss-Prot
Match: Q6DR24 (Uncharacterized protein At3g17950 OS=Arabidopsis thaliana OX=3702 GN=Y-3 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.7e-04
Identity = 25/35 (71.43%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 62 SPSSFTDSSSDLDTESTGSFYHDKSITLGSLIGVS 97
          SP+  + SSSDLDTESTGSF+HD+SITLG+L+G S
Sbjct: 9  SPTISSVSSSDLDTESTGSFFHDRSITLGTLMGFS 43

[Close]
BLAST of Cp4.1LG03g02340 vs. NCBI nr
Match: XP_023527603.1 (uncharacterized protein At3g17950-like [Cucurbita pepo subsp. pepo] >XP_023527604.1 uncharacterized protein At3g17950-like [Cucurbita pepo subsp. pepo] >XP_023527605.1 uncharacterized protein At3g17950-like [Cucurbita pepo subsp. pepo] >XP_023527606.1 uncharacterized protein At3g17950-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 412 bits (1059), Expect = 3.03e-141
Identity = 211/214 (98.60%), Postives = 212/214 (99.07%), Query Frame = 0 

Query: 220 LFSYSTMAQQEDGWPLGLRLMNTRVGLAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTE 279
           + S STMAQQEDGWPLGLRLMNTRVGLAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTE
Sbjct: 1   MLSDSTMAQQEDGWPLGLRLMNTRVGLAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTE 60

Query: 280 STGSFYHDKSITLGSLIGVSSLLELSRRSTKGNGVEILKDKKKYKSKPWLFSLSLCIKLR 339
           STGSFYHDKSITLGSLIGVSSLLELSRRSTKGNGVEILKDKKKYKSKPWLFSLSLCIKLR
Sbjct: 61  STGSFYHDKSITLGSLIGVSSLLELSRRSTKGNGVEILKDKKKYKSKPWLFSLSLCIKLR 120

Query: 340 PDAVSLSSSPSLEHSLEAERRAHNPTMYGPNDYSPVRPVSGTNSLFSSDQVAPVQPFAPA 399
           PDAVSLSSSPSLEHSLEAERRAHNPTMYGPNDYSPVRPVSGTNSLFSSDQVAPVQPFAPA
Sbjct: 121 PDAVSLSSSPSLEHSLEAERRAHNPTMYGPNDYSPVRPVSGTNSLFSSDQVAPVQPFAPA 180

Query: 400 ITEESRRSIGELAEDGYCQGIPPLFSCLYCQLIK 433
           ITEESRRSIGELAEDGYCQGIPPLFSCLYCQLIK
Sbjct: 181 ITEESRRSIGELAEDGYCQGIPPLFSCLYCQLIK 214

[Close]
BLAST of Cp4.1LG03g02340 vs. NCBI nr
Match: KAG6580547.1 (hypothetical protein SDJN03_20549, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 409 bits (1050), Expect = 7.06e-140
Identity = 209/214 (97.66%), Postives = 211/214 (98.60%), Query Frame = 0 

Query: 220 LFSYSTMAQQEDGWPLGLRLMNTRVGLAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTE 279
           + S STMAQQEDGWPLGLRLMNTRVGLAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTE
Sbjct: 1   MLSDSTMAQQEDGWPLGLRLMNTRVGLAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTE 60

Query: 280 STGSFYHDKSITLGSLIGVSSLLELSRRSTKGNGVEILKDKKKYKSKPWLFSLSLCIKLR 339
           STGSFYHDKSITLGSLIGVSSLLELSRRSTKGN VEILKDKKKYKSKPWLFSLSLCIKLR
Sbjct: 61  STGSFYHDKSITLGSLIGVSSLLELSRRSTKGNRVEILKDKKKYKSKPWLFSLSLCIKLR 120

Query: 340 PDAVSLSSSPSLEHSLEAERRAHNPTMYGPNDYSPVRPVSGTNSLFSSDQVAPVQPFAPA 399
           PDAVSLSSSPSLEHSLEAERRAHNPTMYGPNDYSPVRPVSGTNSLFSSDQVAPVQPFAPA
Sbjct: 121 PDAVSLSSSPSLEHSLEAERRAHNPTMYGPNDYSPVRPVSGTNSLFSSDQVAPVQPFAPA 180

Query: 400 ITEESRRSIGELAEDGYCQGIPPLFSCLYCQLIK 433
           +TEESRRSIGELAEDGYCQGIPPLFSCLYCQLIK
Sbjct: 181 VTEESRRSIGELAEDGYCQGIPPLFSCLYCQLIK 214

[Close]
BLAST of Cp4.1LG03g02340 vs. NCBI nr
Match: XP_022934854.1 (uncharacterized protein At3g17950-like [Cucurbita moschata])

HSP 1 Score: 405 bits (1042), Expect = 1.16e-138
Identity = 208/214 (97.20%), Postives = 210/214 (98.13%), Query Frame = 0 

Query: 220 LFSYSTMAQQEDGWPLGLRLMNTRVGLAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTE 279
           + S STMAQQEDGWPLGLRLMNTRVGLA NHDLSASVSFNTLRTHSPSSFTDSSSDLDTE
Sbjct: 1   MLSDSTMAQQEDGWPLGLRLMNTRVGLARNHDLSASVSFNTLRTHSPSSFTDSSSDLDTE 60

Query: 280 STGSFYHDKSITLGSLIGVSSLLELSRRSTKGNGVEILKDKKKYKSKPWLFSLSLCIKLR 339
           STGSFYHDKSITLGSLIGVSSLLELSRRSTKGN VEILKDKKKYKSKPWLFSLSLCIKLR
Sbjct: 61  STGSFYHDKSITLGSLIGVSSLLELSRRSTKGNRVEILKDKKKYKSKPWLFSLSLCIKLR 120

Query: 340 PDAVSLSSSPSLEHSLEAERRAHNPTMYGPNDYSPVRPVSGTNSLFSSDQVAPVQPFAPA 399
           PDAVSLSSSPSLEHSLEAERRAHNPTMYGPNDYSPVRPVSGTNSLFSSDQVAPVQPFAPA
Sbjct: 121 PDAVSLSSSPSLEHSLEAERRAHNPTMYGPNDYSPVRPVSGTNSLFSSDQVAPVQPFAPA 180

Query: 400 ITEESRRSIGELAEDGYCQGIPPLFSCLYCQLIK 433
           +TEESRRSIGELAEDGYCQGIPPLFSCLYCQLIK
Sbjct: 181 VTEESRRSIGELAEDGYCQGIPPLFSCLYCQLIK 214

[Close]
BLAST of Cp4.1LG03g02340 vs. NCBI nr
Match: KAG7017299.1 (hypothetical protein SDJN02_19162 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 404 bits (1039), Expect = 3.31e-138
Identity = 208/214 (97.20%), Postives = 210/214 (98.13%), Query Frame = 0 

Query: 220 LFSYSTMAQQEDGWPLGLRLMNTRVGLAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTE 279
           + S STMAQQEDGWPLGLRLMNTRVGLAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTE
Sbjct: 1   MLSDSTMAQQEDGWPLGLRLMNTRVGLAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTE 60

Query: 280 STGSFYHDKSITLGSLIGVSSLLELSRRSTKGNGVEILKDKKKYKSKPWLFSLSLCIKLR 339
           STGSFYHDKSITLGSLIGVSSLLELSRRSTKGN VEILKDKKKYKSKPWLFSLSLCIKLR
Sbjct: 61  STGSFYHDKSITLGSLIGVSSLLELSRRSTKGNRVEILKDKKKYKSKPWLFSLSLCIKLR 120

Query: 340 PDAVSLSSSPSLEHSLEAERRAHNPTMYGPNDYSPVRPVSGTNSLFSSDQVAPVQPFAPA 399
           PDAVSLSSSPSLEHSLEAERRAHNPTMYGPNDYSPVRPVSGTNSLFSSDQVAPVQPFAPA
Sbjct: 121 PDAVSLSSSPSLEHSLEAERRAHNPTMYGPNDYSPVRPVSGTNSLFSSDQVAPVQPFAPA 180

Query: 400 ITEESRRSIGELAEDGYCQGIPPLFSCLYCQLIK 433
           +TEESRRSIGELAEDGY QGIPPLFSCLYCQLIK
Sbjct: 181 VTEESRRSIGELAEDGYFQGIPPLFSCLYCQLIK 214

[Close]
BLAST of Cp4.1LG03g02340 vs. NCBI nr
Match: XP_022983579.1 (uncharacterized protein At3g17950-like [Cucurbita maxima])

HSP 1 Score: 399 bits (1024), Expect = 6.05e-136
Identity = 207/214 (96.73%), Postives = 209/214 (97.66%), Query Frame = 0 

Query: 220 LFSYSTMAQQEDGWPLGLRLMNTRVGLAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTE 279
           + S STMAQQEDGWPLGLRLMNTRVGLAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTE
Sbjct: 1   MLSDSTMAQQEDGWPLGLRLMNTRVGLAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTE 60

Query: 280 STGSFYHDKSITLGSLIGVSSLLELSRRSTKGNGVEILKDKKKYKSKPWLFSLSLCIKLR 339
           STGSFYHDKSITLGSLIGVSSLLELSRRSTKGN VEILKDKKKYKSKPWLFSLSLCIKLR
Sbjct: 61  STGSFYHDKSITLGSLIGVSSLLELSRRSTKGNRVEILKDKKKYKSKPWLFSLSLCIKLR 120

Query: 340 PDAVSLSSSPSLEHSLEAERRAHNPTMYGPNDYSPVRPVSGTNSLFSSDQVAPVQPFAPA 399
             AVSLSSSPSLEHSLEAERRAHNPTMYGPNDYSPVRPVSGTNSLFSSDQVAPVQPFAPA
Sbjct: 121 -HAVSLSSSPSLEHSLEAERRAHNPTMYGPNDYSPVRPVSGTNSLFSSDQVAPVQPFAPA 180

Query: 400 ITEESRRSIGELAEDGYCQGIPPLFSCLYCQLIK 433
           +TEESRRSIGELAEDGYCQGIPPLFSCLYCQLIK
Sbjct: 181 VTEESRRSIGELAEDGYCQGIPPLFSCLYCQLIK 213

[Close]
BLAST of Cp4.1LG03g02340 vs. ExPASy TrEMBL
Match: A0A6J1F3R7 (uncharacterized protein At3g17950-like OS=Cucurbita moschata OX=3662 GN=LOC111441894 PE=4 SV=1)

HSP 1 Score: 405 bits (1042), Expect = 5.61e-139
Identity = 208/214 (97.20%), Postives = 210/214 (98.13%), Query Frame = 0 

Query: 220 LFSYSTMAQQEDGWPLGLRLMNTRVGLAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTE 279
           + S STMAQQEDGWPLGLRLMNTRVGLA NHDLSASVSFNTLRTHSPSSFTDSSSDLDTE
Sbjct: 1   MLSDSTMAQQEDGWPLGLRLMNTRVGLARNHDLSASVSFNTLRTHSPSSFTDSSSDLDTE 60

Query: 280 STGSFYHDKSITLGSLIGVSSLLELSRRSTKGNGVEILKDKKKYKSKPWLFSLSLCIKLR 339
           STGSFYHDKSITLGSLIGVSSLLELSRRSTKGN VEILKDKKKYKSKPWLFSLSLCIKLR
Sbjct: 61  STGSFYHDKSITLGSLIGVSSLLELSRRSTKGNRVEILKDKKKYKSKPWLFSLSLCIKLR 120

Query: 340 PDAVSLSSSPSLEHSLEAERRAHNPTMYGPNDYSPVRPVSGTNSLFSSDQVAPVQPFAPA 399
           PDAVSLSSSPSLEHSLEAERRAHNPTMYGPNDYSPVRPVSGTNSLFSSDQVAPVQPFAPA
Sbjct: 121 PDAVSLSSSPSLEHSLEAERRAHNPTMYGPNDYSPVRPVSGTNSLFSSDQVAPVQPFAPA 180

Query: 400 ITEESRRSIGELAEDGYCQGIPPLFSCLYCQLIK 433
           +TEESRRSIGELAEDGYCQGIPPLFSCLYCQLIK
Sbjct: 181 VTEESRRSIGELAEDGYCQGIPPLFSCLYCQLIK 214

[Close]
BLAST of Cp4.1LG03g02340 vs. ExPASy TrEMBL
Match: A0A6J1J7U0 (uncharacterized protein At3g17950-like OS=Cucurbita maxima OX=3661 GN=LOC111482141 PE=4 SV=1)

HSP 1 Score: 399 bits (1024), Expect = 2.93e-136
Identity = 207/214 (96.73%), Postives = 209/214 (97.66%), Query Frame = 0 

Query: 220 LFSYSTMAQQEDGWPLGLRLMNTRVGLAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTE 279
           + S STMAQQEDGWPLGLRLMNTRVGLAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTE
Sbjct: 1   MLSDSTMAQQEDGWPLGLRLMNTRVGLAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTE 60

Query: 280 STGSFYHDKSITLGSLIGVSSLLELSRRSTKGNGVEILKDKKKYKSKPWLFSLSLCIKLR 339
           STGSFYHDKSITLGSLIGVSSLLELSRRSTKGN VEILKDKKKYKSKPWLFSLSLCIKLR
Sbjct: 61  STGSFYHDKSITLGSLIGVSSLLELSRRSTKGNRVEILKDKKKYKSKPWLFSLSLCIKLR 120

Query: 340 PDAVSLSSSPSLEHSLEAERRAHNPTMYGPNDYSPVRPVSGTNSLFSSDQVAPVQPFAPA 399
             AVSLSSSPSLEHSLEAERRAHNPTMYGPNDYSPVRPVSGTNSLFSSDQVAPVQPFAPA
Sbjct: 121 -HAVSLSSSPSLEHSLEAERRAHNPTMYGPNDYSPVRPVSGTNSLFSSDQVAPVQPFAPA 180

Query: 400 ITEESRRSIGELAEDGYCQGIPPLFSCLYCQLIK 433
           +TEESRRSIGELAEDGYCQGIPPLFSCLYCQLIK
Sbjct: 181 VTEESRRSIGELAEDGYCQGIPPLFSCLYCQLIK 213

[Close]
BLAST of Cp4.1LG03g02340 vs. ExPASy TrEMBL
Match: A0A6J1CUV3 (uncharacterized protein LOC111014995 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014995 PE=4 SV=1)

HSP 1 Score: 327 bits (837), Expect = 5.94e-108
Identity = 176/214 (82.24%), Postives = 186/214 (86.92%), Query Frame = 0 

Query: 226 MAQQEDGWPLGLRLMNTRVGLAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTESTGSFY 285
           MAQQEDGWPLGLRLMN RVGLAGN DLSASVSFNTLRTHSPSSFTDSSSDLDTESTGSFY
Sbjct: 1   MAQQEDGWPLGLRLMNARVGLAGNRDLSASVSFNTLRTHSPSSFTDSSSDLDTESTGSFY 60

Query: 286 HDKSITLGSLIGVSSLLELSRRSTKGNGVEILKDKKKYKSKPWLFSLSLCIKLRPDAVSL 345
           HDKSITLGSLIGVSS+LELSRRSTKGN VE L+DKKK KSKPWLFSLSLCIKLRPDAVSL
Sbjct: 61  HDKSITLGSLIGVSSILELSRRSTKGNKVETLEDKKKDKSKPWLFSLSLCIKLRPDAVSL 120

Query: 346 SSSPSLEHSLEAER------RAHNPTMYGPNDYSPVRPVSGTNSLFSSDQVAPVQPFAPA 405
            SSPSLEHSL AER      R  NPTMYGPND+SP+RPVSGTNSLF+ DQVAP+  FAP 
Sbjct: 121 RSSPSLEHSLAAERIATRNHRIQNPTMYGPNDFSPIRPVSGTNSLFAGDQVAPIS-FAPV 180

Query: 406 ITEESRRSIGELAEDGYCQGIPPLFSCLYCQLIK 433
           + E +R+S GEL   G  QG+P LFSCLYCQLIK
Sbjct: 181 VEEGARKSNGEL---GNSQGVPLLFSCLYCQLIK 210

[Close]
BLAST of Cp4.1LG03g02340 vs. ExPASy TrEMBL
Match: A0A1S3B5Y9 (uncharacterized protein LOC103486392 OS=Cucumis melo OX=3656 GN=LOC103486392 PE=4 SV=1)

HSP 1 Score: 327 bits (837), Expect = 8.42e-108
Identity = 180/217 (82.95%), Postives = 190/217 (87.56%), Query Frame = 0 

Query: 224 STMAQQEDGWPLGLRLMNTRVG-LAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTESTG 283
           STMA QEDGWPLGLR+MN RVG LAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDT+STG
Sbjct: 5   STMALQEDGWPLGLRVMNARVGGLAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTKSTG 64

Query: 284 SFYHDKSITLGSLIGVSSLLELSRRSTKGNGVEILKDKKKYKSKPWLFSLSLCIKLRPDA 343
           SFY DKSITLGSLIGVSS+LELSRRSTKGN VEIL+DKKKYKSKPWLFSLSLCIKLRPDA
Sbjct: 65  SFYPDKSITLGSLIGVSSILELSRRSTKGNKVEILEDKKKYKSKPWLFSLSLCIKLRPDA 124

Query: 344 VSLSSSPSLEHSLEAERRA------HNPTMYGPNDYSPVRPVSGTNSLFSSDQVAPVQPF 403
           VS SSSPSL+HSLEAER+A      HN T+YGPNDYS V PVSG NSLFSSD+V PV  F
Sbjct: 125 VSFSSSPSLQHSLEAERKATRNRRNHNSTLYGPNDYSLVPPVSGANSLFSSDRVDPVS-F 184

Query: 404 APAITEESRRSIGELAEDGYCQGIPPLFSCLYCQLIK 433
           A A  EESRRS GEL ++G  QGIP LFSCLYCQLIK
Sbjct: 185 AQAGEEESRRSDGELVQNGNSQGIPLLFSCLYCQLIK 220

[Close]
BLAST of Cp4.1LG03g02340 vs. ExPASy TrEMBL
Match: A0A5A7TPR1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001720 PE=4 SV=1)

HSP 1 Score: 323 bits (828), Expect = 1.57e-106
Identity = 178/215 (82.79%), Postives = 188/215 (87.44%), Query Frame = 0 

Query: 226 MAQQEDGWPLGLRLMNTRVG-LAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTESTGSF 285
           MA QEDGWPLGLR+MN RVG LAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDT+STGSF
Sbjct: 1   MALQEDGWPLGLRVMNARVGGLAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTKSTGSF 60

Query: 286 YHDKSITLGSLIGVSSLLELSRRSTKGNGVEILKDKKKYKSKPWLFSLSLCIKLRPDAVS 345
           Y DKSITLGSLIGVSS+LELSRRSTKGN VEIL+DKKKYKSKPWLFSLSLCIKLRPDAVS
Sbjct: 61  YPDKSITLGSLIGVSSILELSRRSTKGNKVEILEDKKKYKSKPWLFSLSLCIKLRPDAVS 120

Query: 346 LSSSPSLEHSLEAERRA------HNPTMYGPNDYSPVRPVSGTNSLFSSDQVAPVQPFAP 405
            SSSPSL+HSLEAER+A      HN T+YGPNDYS V PVSG NSLFSSD+V PV  FA 
Sbjct: 121 FSSSPSLQHSLEAERKATRNRRNHNSTLYGPNDYSLVPPVSGANSLFSSDRVDPVS-FAQ 180

Query: 406 AITEESRRSIGELAEDGYCQGIPPLFSCLYCQLIK 433
           A  EESRRS GEL ++G  QGIP LFSCLYCQLIK
Sbjct: 181 AGEEESRRSDGELVQNGNSQGIPLLFSCLYCQLIK 214

[Close]
BLAST of Cp4.1LG03g02340 vs. TAIR 10
Match: AT5G02440.1 (unknown protein; Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 98.2 bits (243), Expect = 1.7e-20
Identity = 72/170 (42.35%), Postives = 99/170 (58.24%), Query Frame = 0 

Query: 23  MAQQEDGWPLGLRLMNTRVG--LAGNHD-------LSASVSFNTLRTHSPSSFTDSSSDL 82
           MA QE+GWPLGLR +N R+G    G H         + S+SF++L + SPSS   SSSDL
Sbjct: 1   MAHQEEGWPLGLRPVNARIGGLTRGTHHHHHHEQVSAGSISFSSLLSPSPSS--QSSSDL 60

Query: 83  DTESTGSFYHDKSITLGSLIGVSSLLELSRRS--TKGNGVEILKDKKKYKS-----KPWL 142
           D++S GSF+ D+S TLG+LIG+SS LELSRRS  T+ +     ++ + +K+     KPW+
Sbjct: 61  DSQSMGSFFRDRSYTLGNLIGISSFLELSRRSNRTRNDQTGAARNHQHHKNLKTYYKPWI 120

Query: 143 FSLSLCIKLRPDAVSLSSS-------------PSLEHSLEAERRAHNPTM 164
           F  S+C KL  +A  +S +              SL H L  ERRA   T+
Sbjct: 121 F--SICSKLSTNATVISHNRIINEENDGRNNVQSLGHFLIMERRAVGSTI 166

[Close]
BLAST of Cp4.1LG03g02340 vs. TAIR 10
Match: AT3G17950.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 1.2e-05
Identity = 25/35 (71.43%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 62 SPSSFTDSSSDLDTESTGSFYHDKSITLGSLIGVS 97
          SP+  + SSSDLDTESTGSF+HD+SITLG+L+G S
Sbjct: 9  SPTISSVSSSDLDTESTGSFFHDRSITLGTLMGFS 43

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g02340 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6DR241.7e-0471.43Uncharacterized protein At3g17950 OS=Arabidopsis thaliana OX=3702 GN=Y-3 PE=1 SV... [more]
BLAST of Cp4.1LG03g02340 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023527603.13.03e-14198.60uncharacterized protein At3g17950-like [Cucurbita pepo subsp. pepo] >XP_02352760... [more]
KAG6580547.17.06e-14097.66hypothetical protein SDJN03_20549, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022934854.11.16e-13897.20uncharacterized protein At3g17950-like [Cucurbita moschata][more]
KAG7017299.13.31e-13897.20hypothetical protein SDJN02_19162 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022983579.16.05e-13696.73uncharacterized protein At3g17950-like [Cucurbita maxima][more]
BLAST of Cp4.1LG03g02340 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1F3R75.61e-13997.20uncharacterized protein At3g17950-like OS=Cucurbita moschata OX=3662 GN=LOC11144... [more]
A0A6J1J7U02.93e-13696.73uncharacterized protein At3g17950-like OS=Cucurbita maxima OX=3661 GN=LOC1114821... [more]
A0A6J1CUV35.94e-10882.24uncharacterized protein LOC111014995 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A1S3B5Y98.42e-10882.95uncharacterized protein LOC103486392 OS=Cucumis melo OX=3656 GN=LOC103486392 PE=... [more]
A0A5A7TPR11.57e-10682.79Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of Cp4.1LG03g02340 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G02440.11.7e-2042.35unknown protein; Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bac... [more]
AT3G17950.11.2e-0571.43unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040344Uncharacterized protein At3g17950-likePANTHERPTHR33544FAMILY NOT NAMEDcoord: 23..222
coord: 226..428
NoneNo IPR availablePANTHERPTHR33544:SF360S RIBOSOMAL PROTEIN L36coord: 23..222
coord: 226..428

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g02340.1Cp4.1LG03g02340.1mRNA