Cp4.1LG03g00650 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGGGTGATTTTCTGGCTCGATCCCTTTTGTGAGTTATTCGATTTCTCTGCTTTGTGTTTGTCTATGAACTTGAAGTCAATGATGAATTTTGAATTGCAGGCTGCTGTTTGGGTATGCATATCCAGCGTTTCAGTGCTACAAAGCGGTGGTGATGGCGCCAATTCAAGTCGAGCAGCTTCGATATTGGTGTAAATTTTGGTAACAAAGACTCGACCAATTCATGTTAATTCAATAATTGAAAGGTTATTTTGGGTTAGAATGATTGAAATGTGGTGATGCAGGATCGTTGTGGCTATTCTAACCGTTGTTGAGAGGATTGCTGATGCTTTTGTGGGATGGTTCCCCATGTATGGAGAATTGAAGCTGGCTCTGTTTATCTACTTGTGGTATCCAAAGACTATGGTAACAACCAGCTTCAATTTAATCCCTTTGATGCTTGTTTGTTTGTGAAATAACGAAATAAAAAAAACAATGCAGGGATCTGGGTATGTGTTCGACACGTTGTTGAGGCCTTTGGTTGATAAAAATGACAAGGATATTGAAAAGATGCTGTTGGATTTGAGAATAAAGGCTTGGGATTTGGCCATTTTCTACTGGAACAATTGCACCGAGTTGAGCCAATCTGCATTGCTCCGAGTTGTTAACTACATGGCTTCTCGCCGTAATCCCTTAGCTGCTACGCCTTCTTCCAAGAAGCTGAAGTGA ATGTTGGTGCTACAAAGCGGTGGTGATGGCGCCAATTCAAGTCGAGCAGCTTCGATATTGGTGATCGTTGTGGCTATTCTAACCGTTGTTGAGAGGATTGCTGATGCTTTTGTGGGATGGTTCCCCATGTATGGAGAATTGAAGCTGGCTCTGTTTATCTACTTGTGGTATCCAAAGACTATGGGATCTGGGTATGTGTTCGACACGTTGTTGAGGCCTTTGGTTGATAAAAATGACAAGGATATTGAAAAGATGCTGTTGGATTTGAGAATAAAGGCTTGGGATTTGGCCATTTTCTACTGGAACAATTGCACCGAGTTGAGCCAATCTGCATTGCTCCGAGTTGTTAACTACATGGCTTCTCGCCGTAATCCCTTAGCTGCTACGCCTTCTTCCAAGAAGCTGAAGTGA ATGTTGGTGCTACAAAGCGGTGGTGATGGCGCCAATTCAAGTCGAGCAGCTTCGATATTGGTGATCGTTGTGGCTATTCTAACCGTTGTTGAGAGGATTGCTGATGCTTTTGTGGGATGGTTCCCCATGTATGGAGAATTGAAGCTGGCTCTGTTTATCTACTTGTGGTATCCAAAGACTATGGGATCTGGGTATGTGTTCGACACGTTGTTGAGGCCTTTGGTTGATAAAAATGACAAGGATATTGAAAAGATGCTGTTGGATTTGAGAATAAAGGCTTGGGATTTGGCCATTTTCTACTGGAACAATTGCACCGAGTTGAGCCAATCTGCATTGCTCCGAGTTGTTAACTACATGGCTTCTCGCCGTAATCCCTTAGCTGCTACGCCTTCTTCCAAGAAGCTGAAGTGA MLVLQSGGDGANSSRAASILVIVVAILTVVERIADAFVGWFPMYGELKLALFIYLWYPKTMGSGYVFDTLLRPLVDKNDKDIEKMLLDLRIKAWDLAIFYWNNCTELSQSALLRVVNYMASRRNPLAATPSSKKLK Homology
BLAST of Cp4.1LG03g00650 vs. ExPASy Swiss-Prot
Match: Q8LE10 (HVA22-like protein i OS=Arabidopsis thaliana OX=3702 GN=HVA22I PE=2 SV=2) HSP 1 Score: 117.1 bits (292), Expect = 1.6e-25 Identity = 51/112 (45.54%), Postives = 74/112 (66.07%), Query Frame = 0
BLAST of Cp4.1LG03g00650 vs. ExPASy Swiss-Prot
Match: Q8GXE9 (HVA22-like protein j OS=Arabidopsis thaliana OX=3702 GN=HVA22J PE=2 SV=2) HSP 1 Score: 107.1 bits (266), Expect = 1.6e-22 Identity = 42/112 (37.50%), Postives = 80/112 (71.43%), Query Frame = 0
BLAST of Cp4.1LG03g00650 vs. ExPASy Swiss-Prot
Match: Q8LEM6 (HVA22-like protein h OS=Arabidopsis thaliana OX=3702 GN=HVA22H PE=2 SV=2) HSP 1 Score: 102.4 bits (254), Expect = 4.0e-21 Identity = 47/113 (41.59%), Postives = 73/113 (64.60%), Query Frame = 0
BLAST of Cp4.1LG03g00650 vs. ExPASy Swiss-Prot
Match: Q9LR09 (Putative HVA22-like protein g OS=Arabidopsis thaliana OX=3702 GN=HVA22G PE=3 SV=2) HSP 1 Score: 100.5 bits (249), Expect = 1.5e-20 Identity = 44/113 (38.94%), Postives = 69/113 (61.06%), Query Frame = 0
BLAST of Cp4.1LG03g00650 vs. ExPASy Swiss-Prot
Match: Q5HZP8 (Receptor expression-enhancing protein 3-B OS=Xenopus laevis OX=8355 GN=reep3-b PE=2 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 6.0e-09 Identity = 30/90 (33.33%), Postives = 51/90 (56.67%), Query Frame = 0
BLAST of Cp4.1LG03g00650 vs. NCBI nr
Match: XP_023528815.1 (HVA22-like protein i [Cucurbita pepo subsp. pepo]) HSP 1 Score: 232 bits (591), Expect = 9.58e-76 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0
BLAST of Cp4.1LG03g00650 vs. NCBI nr
Match: XP_022935320.1 (HVA22-like protein i [Cucurbita moschata]) HSP 1 Score: 225 bits (574), Expect = 3.73e-73 Identity = 112/115 (97.39%), Postives = 112/115 (97.39%), Query Frame = 0
BLAST of Cp4.1LG03g00650 vs. NCBI nr
Match: KAG6580730.1 (HVA22-like protein i, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 224 bits (570), Expect = 1.52e-72 Identity = 111/115 (96.52%), Postives = 111/115 (96.52%), Query Frame = 0
BLAST of Cp4.1LG03g00650 vs. NCBI nr
Match: XP_022983137.1 (HVA22-like protein i [Cucurbita maxima]) HSP 1 Score: 223 bits (568), Expect = 3.06e-72 Identity = 110/115 (95.65%), Postives = 112/115 (97.39%), Query Frame = 0
BLAST of Cp4.1LG03g00650 vs. NCBI nr
Match: XP_038904449.1 (HVA22-like protein i [Benincasa hispida]) HSP 1 Score: 207 bits (526), Expect = 8.15e-66 Identity = 98/109 (89.91%), Postives = 105/109 (96.33%), Query Frame = 0
BLAST of Cp4.1LG03g00650 vs. ExPASy TrEMBL
Match: A0A6J1FAB0 (HVA22-like protein OS=Cucurbita moschata OX=3662 GN=LOC111442244 PE=3 SV=1) HSP 1 Score: 225 bits (574), Expect = 1.81e-73 Identity = 112/115 (97.39%), Postives = 112/115 (97.39%), Query Frame = 0
BLAST of Cp4.1LG03g00650 vs. ExPASy TrEMBL
Match: A0A6J1IYF5 (HVA22-like protein OS=Cucurbita maxima OX=3661 GN=LOC111481778 PE=3 SV=1) HSP 1 Score: 223 bits (568), Expect = 1.48e-72 Identity = 110/115 (95.65%), Postives = 112/115 (97.39%), Query Frame = 0
BLAST of Cp4.1LG03g00650 vs. ExPASy TrEMBL
Match: A0A5A7TKI4 (HVA22-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004350 PE=3 SV=1) HSP 1 Score: 200 bits (508), Expect = 2.17e-63 Identity = 98/115 (85.22%), Postives = 105/115 (91.30%), Query Frame = 0
BLAST of Cp4.1LG03g00650 vs. ExPASy TrEMBL
Match: A0A1S3B7K3 (HVA22-like protein OS=Cucumis melo OX=3656 GN=LOC103486659 PE=3 SV=1) HSP 1 Score: 200 bits (508), Expect = 2.17e-63 Identity = 98/115 (85.22%), Postives = 105/115 (91.30%), Query Frame = 0
BLAST of Cp4.1LG03g00650 vs. ExPASy TrEMBL
Match: A0A0A0LEQ0 (HVA22-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G778380 PE=3 SV=1) HSP 1 Score: 192 bits (487), Expect = 2.39e-60 Identity = 91/111 (81.98%), Postives = 102/111 (91.89%), Query Frame = 0
BLAST of Cp4.1LG03g00650 vs. TAIR 10
Match: AT5G42560.1 (Abscisic acid-responsive (TB2/DP1, HVA22) family protein ) HSP 1 Score: 117.1 bits (292), Expect = 1.1e-26 Identity = 51/112 (45.54%), Postives = 74/112 (66.07%), Query Frame = 0
BLAST of Cp4.1LG03g00650 vs. TAIR 10
Match: AT5G42560.2 (Abscisic acid-responsive (TB2/DP1, HVA22) family protein ) HSP 1 Score: 117.1 bits (292), Expect = 1.1e-26 Identity = 51/112 (45.54%), Postives = 74/112 (66.07%), Query Frame = 0
BLAST of Cp4.1LG03g00650 vs. TAIR 10
Match: AT5G42560.3 (Abscisic acid-responsive (TB2/DP1, HVA22) family protein ) HSP 1 Score: 117.1 bits (292), Expect = 1.1e-26 Identity = 51/112 (45.54%), Postives = 74/112 (66.07%), Query Frame = 0
BLAST of Cp4.1LG03g00650 vs. TAIR 10
Match: AT2G36020.1 (HVA22-like protein J ) HSP 1 Score: 107.1 bits (266), Expect = 1.2e-23 Identity = 42/112 (37.50%), Postives = 80/112 (71.43%), Query Frame = 0
BLAST of Cp4.1LG03g00650 vs. TAIR 10
Match: AT1G19950.1 (HVA22-like protein H (ATHVA22H) ) HSP 1 Score: 102.4 bits (254), Expect = 2.8e-22 Identity = 47/113 (41.59%), Postives = 73/113 (64.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|