Cp4.1LG02g15520 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG02g15520
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description60S ribosomal protein L31
LocationCp4.1LG02: 13359909 .. 13362240 (+)
RNA-Seq ExpressionCp4.1LG02g15520
SyntenyCp4.1LG02g15520
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGCGATGAGGAGCGCAAAGAATGTGCCCTAGATTTGCTCGTTGAGAGAAATGGTCGATGGCGGGAAAGGTACCCTCCAAATCATGGACAGTTGGACTCCGGCCCAATTCCTCTTCCGGCCCGATTACCCGATTCCAATAAAGTGAATTACGAAAAGAAAAAAAAATTAAAATTAAAATTAAAATTAAAACGTTTTTTCTTTTTTTTTTTTTTTGTTTTTTGAGAAGTTTTAATTTTTTTTGTGAATTTATAAAGGTCGGTCACCCAACAGGCGATCTTCTCTTCCCCGTCGTCGGGTTGCTAGGGTTTTATCTTCAGCGGCGGAGAGTTGAGTTTTCCGGGCCGTGAAAAAATGGCGGATAAATCGGCCAAGGCAAGAAAAAGCGAGGTCGTCACCAGGGAGTATACCGTCAATCTCCACAAACGCTTGCACGGATGGTAACTCTCTCCCTCTCTCTTTCTCTCCCGGATTTTCTGGTTTTGATATGGTGAAAAGTACAGATGAATATGATTCAGCTGTAGGTTGATTTGTCGGCATGATTTTTGTCCTCCTGCGTTTAATTTCGTAGTTTAACCGTATGGACCCCGTCGTTATGGTTTTATGTCGGTAGATATTAAATGAGTCTTGAATTTAATGTTCTGTTCCGTTGTGGGCTGTGTTATTCAAGTGATATATTGTGAGGATTGTCGATTTTGACTGTGCACTTGAATTGATGACATTGGGGGGTCAATGTTCTTTGCTGTTCTTAGTAGTTTGTATAATTTGGAGTATTGCGAGTGCAGTTGCACCTTAGCAAGTTTTATTAGTTGTGGTTGATGAGTTTGGCATCATTCTGGTACTGTTCAATTTTTTTTCCATGATAGGAGTTCTGGTTCTTAACTAACAACTGACTTAATTATATGTTATGTTCCTTCTTAAAGGGCTTCTAGCCTACATATTGTACTCATCTTGAAAGGTTATTCTTCAATTTTCTGGTCCTAGAAAAATATCCTCACGGATACCTCTGTGCTTATGTTCTATTCATTTGCTCTCGTGAGAGATACTTGGCACTTTTGTGCGTTTCATGTTTGATCCACAACATATTTGTAACAATCCAAGCCCACCGCTAGTAGATTGTCCTTTTTGGGCTTTCTCTTCAAAGTTTTAAAATGTGTCTACGAAGAGAGGTTTTCACACCCTTATAAGGAATGTTTTGTTCCCCTCTCCAACCAATGTAGGATCTCACAATTCACCCCCTTGGTGCACCAACGTCCTTCTTGGCACACCGCCTGGTGTTTGGCTTTGATACCATTTGTAACAACCCTTGCAAACCGCTGGATATGGTCCTCTTTAGACTTTCTCTTCACGAGCTTCCTCTCAAGGTTTTAATTTGCCTCTACTAGGGAGAGGTTTACACACCCGTATAAGGAATGCTTCATTTCCCTCTCCAATCGATGCGGGATCTCACAGATTTGGAAAAAGTTAAGCGTTAGCATGGGCTAAATCGAGTCATAAATAGGGGAAGTGGGAAAGGGAGAATGGAGAAGCATCGATTCAGTGAGTTTGGTTAGGGCTTGAGTGAGAGTGCTCAAGAAAGAAGGTTTAAATACCTCGAATACTTGGTTACCTTGTATCTCCGTTATCTTACATTTCAATACATTTGGGTTCTGTCATATTAGTCATTGATTTCAATGCCTTGTTATGTACCTTTTATATCTCGAATGCTTTTAGTGACTTCTTATTCATAATAATCATATGCAGCACATTCAAGAAGAAGGCACCGAAGGCTATCAAGGAACTCAGAAAGTTTGCTCAGAATGCTATGGGTACCACTGATGTTAGAGTGGACGTGAAACTTAACAAGCATATATGGAGTCGCGGAATTAGGAGTGTACCAAGGAGGGTTCGAGTGCGCATTGCACGAAAGCGTAACGACGAGGAAGATGCCAAGGAGGAATTCTATTCCTTAGTAACTGTCGCAGAGGTACCTGCAGAGGGATTCAAGGGCTTGGATACCAAGGTCATTGATGAAGAAGAGGACTAAATGAGCTTCCCAAAACTAAGGTCAATTCTTGGTTTGCTATGGTCTTACACATCCATTTTTGACTCAAGGTTTTTTGCAACTTTTAGTAAAGAAATTAAACCAAACCCATTAGGATATTACCTAACATAGATTGAGCTATGTTTGAATTGATATGTTTAAATAATCTATGTTTGAATTGATATGTTTAAATCACTCTCGAACGGGGTAAATGACTTTACTAATTAAAGTATATCCCTCGATTAATAGATTTGTAGGACATTGACAGGTTCGTGTTGAATTAAAAGTGAAATATTTAATTATTTTATTTT

mRNA sequence

AAGCGATGAGGAGCGCAAAGAATGTGCCCTAGATTTGCTCGTTGAGAGAAATGGTCGATGGCGGGAAAGGTACCCTCCAAATCATGGACAGTTGGACTCCGGCCCAATTCCTCTTCCGGCCCGATTACCCGATTCCAATAAAGTGAATTACGAAAAGAAAAAAAAATTAAAATTAAAATTAAAATTAAAACGTTTTTTCTTTTTTTTTTTTTTTGTTTTTTGAGAAGTTTTAATTTTTTTTGTGAATTTATAAAGGTCGGTCACCCAACAGGCGATCTTCTCTTCCCCGTCGTCGGGTTGCTAGGGTTTTATCTTCAGCGGCGGAGAGTTGAGTTTTCCGGGCCGTGAAAAAATGGCGGATAAATCGGCCAAGGCAAGAAAAAGCGAGGTCGTCACCAGGGAGTATACCGTCAATCTCCACAAACGCTTGCACGGATGCACATTCAAGAAGAAGGCACCGAAGGCTATCAAGGAACTCAGAAAGTTTGCTCAGAATGCTATGGGTACCACTGATGTTAGAGTGGACGTGAAACTTAACAAGCATATATGGAGTCGCGGAATTAGGAGTGTACCAAGGAGGGTTCGAGTGCGCATTGCACGAAAGCGTAACGACGAGGAAGATGCCAAGGAGGAATTCTATTCCTTAGTAACTGTCGCAGAGGTACCTGCAGAGGGATTCAAGGGCTTGGATACCAAGGTCATTGATGAAGAAGAGGACTAAATGAGCTTCCCAAAACTAAGGTCAATTCTTGGTTTGCTATGGTCTTACACATCCATTTTTGACTCAAGGTTTTTTGCAACTTTTAGTAAAGAAATTAAACCAAACCCATTAGGATATTACCTAACATAGATTGAGCTATGTTTGAATTGATATGTTTAAATAATCTATGTTTGAATTGATATGTTTAAATCACTCTCGAACGGGGTAAATGACTTTACTAATTAAAGTATATCCCTCGATTAATAGATTTGTAGGACATTGACAGGTTCGTGTTGAATTAAAAGTGAAATATTTAATTATTTTATTTT

Coding sequence (CDS)

ATGGCGGATAAATCGGCCAAGGCAAGAAAAAGCGAGGTCGTCACCAGGGAGTATACCGTCAATCTCCACAAACGCTTGCACGGATGCACATTCAAGAAGAAGGCACCGAAGGCTATCAAGGAACTCAGAAAGTTTGCTCAGAATGCTATGGGTACCACTGATGTTAGAGTGGACGTGAAACTTAACAAGCATATATGGAGTCGCGGAATTAGGAGTGTACCAAGGAGGGTTCGAGTGCGCATTGCACGAAAGCGTAACGACGAGGAAGATGCCAAGGAGGAATTCTATTCCTTAGTAACTGTCGCAGAGGTACCTGCAGAGGGATTCAAGGGCTTGGATACCAAGGTCATTGATGAAGAAGAGGACTAA

Protein sequence

MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVAEVPAEGFKGLDTKVIDEEED
Homology
[Close]
BLAST of Cp4.1LG02g15520 vs. ExPASy Swiss-Prot
Match: Q9M573 (60S ribosomal protein L31 OS=Perilla frutescens OX=48386 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.6e-53
Identity = 104/121 (85.95%), Postives = 112/121 (92.56%), Query Frame = 0 

Query: 1   MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVK 60
           MADK +K RK EVV+REYT+NLHKRLHGCTFKKKAPKAIKE+RKFAQ AMGTTDVRVDVK
Sbjct: 1   MADKGSKPRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVK 60

Query: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVAEVPAEGFKGLDTKVIDEE 120
           LNKHIWSRGIRSVPRR+RVRIARKRND+EDAKEE YSLVTVAE+P  G KGL T+VIDEE
Sbjct: 61  LNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPEGGLKGLGTQVIDEE 120

Query: 121 E 122
           E
Sbjct: 121 E 121

[Close]
BLAST of Cp4.1LG02g15520 vs. ExPASy Swiss-Prot
Match: P46290 (60S ribosomal protein L31 OS=Nicotiana glutinosa OX=35889 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.4e-49
Identity = 99/121 (81.82%), Postives = 110/121 (90.91%), Query Frame = 0 

Query: 1   MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVK 60
           M+DK+ K RK EVVTREYT+NLHKRLH CTFKKKAP AIKE+RKFAQ AMGT DVRVDVK
Sbjct: 1   MSDKT-KGRKEEVVTREYTINLHKRLHSCTFKKKAPTAIKEIRKFAQKAMGTKDVRVDVK 60

Query: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVAEVPAEGFKGLDTKVIDEE 120
           LNK IWSRGIRSVPRRVRVRIARKRND+EDAKEE YSLVTVAE+PA+G KGL TK+I++E
Sbjct: 61  LNKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAEIPAKGLKGLGTKIIEDE 120

Query: 121 E 122
           +
Sbjct: 121 D 120

[Close]
BLAST of Cp4.1LG02g15520 vs. ExPASy Swiss-Prot
Match: P51420 (60S ribosomal protein L31-3 OS=Arabidopsis thaliana OX=3702 GN=RPL31C PE=3 SV=2)

HSP 1 Score: 189.9 bits (481), Expect = 1.7e-47
Identity = 91/115 (79.13%), Postives = 104/115 (90.43%), Query Frame = 0 

Query: 7   KARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIW 66
           K RK EV+TREYT+NLH+RLH CTFKKKAPKAIKE+RKFA+ AMGT DVRVDVKLNK IW
Sbjct: 5   KGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIW 64

Query: 67  SRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVAEVPAEGFKGLDTKVIDEEE 122
           S+GIR  PRR+RVR+ARKRND+EDAKEEF+SLVTVAE+PAEG  GL TKVI+EE+
Sbjct: 65  SKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119

[Close]
BLAST of Cp4.1LG02g15520 vs. ExPASy Swiss-Prot
Match: O65071 (60S ribosomal protein L31 OS=Picea mariana OX=3335 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 2.2e-47
Identity = 90/118 (76.27%), Postives = 107/118 (90.68%), Query Frame = 0 

Query: 4   KSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNK 63
           +  K+R++EV TREYT+NLH+RLHGCTFKK APKA+KE+RKFAQ AMGTTDVR+DVKLNK
Sbjct: 3   EKGKSRRNEVATREYTINLHRRLHGCTFKKMAPKAVKEIRKFAQKAMGTTDVRLDVKLNK 62

Query: 64  HIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVAEVPAEGFKGLDTKVIDEEE 122
            +WSRGIRSVPRR+RVRI+RKRNDEEDAK+E YS+VTVAEVP EG  GL TK+I+EE+
Sbjct: 63  AVWSRGIRSVPRRMRVRISRKRNDEEDAKDELYSIVTVAEVPPEGLTGLGTKIIEEED 120

[Close]
BLAST of Cp4.1LG02g15520 vs. ExPASy Swiss-Prot
Match: Q9SLL7 (60S ribosomal protein L31-1 OS=Arabidopsis thaliana OX=3702 GN=RPL31A PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 3.8e-47
Identity = 92/118 (77.97%), Postives = 103/118 (87.29%), Query Frame = 0 

Query: 4   KSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNK 63
           +  K RK EVVTREYT+NLH+RLH CTFKKKAP AIKE+RKFA  AMGT DVRVDVKLNK
Sbjct: 2   EKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLNK 61

Query: 64  HIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVAEVPAEGFKGLDTKVIDEEE 122
            IWS+GIR  PRR+RVR+ARKRND+EDAKEEF+SLVTVAE+PAEG  GL TKVI+EEE
Sbjct: 62  QIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE 119

[Close]
BLAST of Cp4.1LG02g15520 vs. NCBI nr
Match: XP_023525745.1 (60S ribosomal protein L31-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 231 bits (588), Expect = 4.53e-76
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0 

Query: 1   MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVK 60
           MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVK
Sbjct: 1   MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVK 60

Query: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVAEVPAEGFKGLDTKVIDEE 120
           LNKHIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVAEVPAEGFKGLDTKVIDEE
Sbjct: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVAEVPAEGFKGLDTKVIDEE 120

Query: 121 ED 122
           ED
Sbjct: 121 ED 122

[Close]
BLAST of Cp4.1LG02g15520 vs. NCBI nr
Match: XP_038903425.1 (60S ribosomal protein L31 [Benincasa hispida])

HSP 1 Score: 217 bits (553), Expect = 9.56e-71
Identity = 115/121 (95.04%), Postives = 118/121 (97.52%), Query Frame = 0 

Query: 1   MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVK 60
           MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQ AMGTTDVRVDVK
Sbjct: 1   MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQKAMGTTDVRVDVK 60

Query: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVAEVPAEGFKGLDTKVIDEE 120
           LNK+IWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSL+TVAEVPAEG KGL TKVIDEE
Sbjct: 61  LNKNIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLITVAEVPAEGLKGLGTKVIDEE 120

[Close]
BLAST of Cp4.1LG02g15520 vs. NCBI nr
Match: XP_022152572.1 (60S ribosomal protein L31 [Momordica charantia])

HSP 1 Score: 217 bits (552), Expect = 1.36e-70
Identity = 115/121 (95.04%), Postives = 117/121 (96.69%), Query Frame = 0 

Query: 1   MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVK 60
           MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAP AIKELRKFAQ AMGTTDVRVDVK
Sbjct: 1   MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVK 60

Query: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVAEVPAEGFKGLDTKVIDEE 120
           LNKHIWSRGIRSVPRRVRVRIA+KRNDEEDAKEEFYSLVTVAEVPAEG KGL TKVIDEE
Sbjct: 61  LNKHIWSRGIRSVPRRVRVRIAQKRNDEEDAKEEFYSLVTVAEVPAEGLKGLGTKVIDEE 120

[Close]
BLAST of Cp4.1LG02g15520 vs. NCBI nr
Match: XP_012065534.1 (60S ribosomal protein L31 [Jatropha curcas] >KDP43449.1 hypothetical protein JCGZ_16736 [Jatropha curcas])

HSP 1 Score: 211 bits (538), Expect = 1.85e-68
Identity = 108/121 (89.26%), Postives = 115/121 (95.04%), Query Frame = 0 

Query: 1   MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVK 60
           M +KS K RK EVVTREYT+NLHKRLHGCTFKKKAPKAIKE+RKFAQ AMGTTDVRVDVK
Sbjct: 1   MVEKSGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQEAMGTTDVRVDVK 60

Query: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVAEVPAEGFKGLDTKVIDEE 120
           LNKH+WSRGIRSVP+RVRVRIARKRNDEEDAKEEF+SLVTVAEVP EGFKGLDTKVIDEE
Sbjct: 61  LNKHVWSRGIRSVPKRVRVRIARKRNDEEDAKEEFFSLVTVAEVPPEGFKGLDTKVIDEE 120

[Close]
BLAST of Cp4.1LG02g15520 vs. NCBI nr
Match: XP_021658421.1 (60S ribosomal protein L31 [Hevea brasiliensis] >ADR71260.1 60S ribosomal protein L31A [Hevea brasiliensis])

HSP 1 Score: 211 bits (538), Expect = 1.85e-68
Identity = 109/121 (90.08%), Postives = 115/121 (95.04%), Query Frame = 0 

Query: 1   MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVK 60
           M +K+AK RK EVVTREYT+NLHKRLHGCTFKKKAPKAIKE+RKFAQ AMGTTDVRVDVK
Sbjct: 1   MVEKAAKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVK 60

Query: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVAEVPAEGFKGLDTKVIDEE 120
           LNKHIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTV EVP+EGFKGL TKVIDEE
Sbjct: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVTEVPSEGFKGLGTKVIDEE 120

[Close]
BLAST of Cp4.1LG02g15520 vs. ExPASy TrEMBL
Match: A0A6J1DGM1 (60S ribosomal protein L31 OS=Momordica charantia OX=3673 GN=LOC111020269 PE=3 SV=1)

HSP 1 Score: 217 bits (552), Expect = 6.57e-71
Identity = 115/121 (95.04%), Postives = 117/121 (96.69%), Query Frame = 0 

Query: 1   MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVK 60
           MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAP AIKELRKFAQ AMGTTDVRVDVK
Sbjct: 1   MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVK 60

Query: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVAEVPAEGFKGLDTKVIDEE 120
           LNKHIWSRGIRSVPRRVRVRIA+KRNDEEDAKEEFYSLVTVAEVPAEG KGL TKVIDEE
Sbjct: 61  LNKHIWSRGIRSVPRRVRVRIAQKRNDEEDAKEEFYSLVTVAEVPAEGLKGLGTKVIDEE 120

[Close]
BLAST of Cp4.1LG02g15520 vs. ExPASy TrEMBL
Match: A0A067LGY1 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16736 PE=3 SV=1)

HSP 1 Score: 211 bits (538), Expect = 8.97e-69
Identity = 108/121 (89.26%), Postives = 115/121 (95.04%), Query Frame = 0 

Query: 1   MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVK 60
           M +KS K RK EVVTREYT+NLHKRLHGCTFKKKAPKAIKE+RKFAQ AMGTTDVRVDVK
Sbjct: 1   MVEKSGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQEAMGTTDVRVDVK 60

Query: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVAEVPAEGFKGLDTKVIDEE 120
           LNKH+WSRGIRSVP+RVRVRIARKRNDEEDAKEEF+SLVTVAEVP EGFKGLDTKVIDEE
Sbjct: 61  LNKHVWSRGIRSVPKRVRVRIARKRNDEEDAKEEFFSLVTVAEVPPEGFKGLDTKVIDEE 120

[Close]
BLAST of Cp4.1LG02g15520 vs. ExPASy TrEMBL
Match: I3NMM3 (60S ribosomal protein L31A OS=Hevea brasiliensis OX=3981 GN=RPL31A PE=2 SV=1)

HSP 1 Score: 211 bits (538), Expect = 8.97e-69
Identity = 109/121 (90.08%), Postives = 115/121 (95.04%), Query Frame = 0 

Query: 1   MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVK 60
           M +K+AK RK EVVTREYT+NLHKRLHGCTFKKKAPKAIKE+RKFAQ AMGTTDVRVDVK
Sbjct: 1   MVEKAAKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVK 60

Query: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVAEVPAEGFKGLDTKVIDEE 120
           LNKHIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTV EVP+EGFKGL TKVIDEE
Sbjct: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVTEVPSEGFKGLGTKVIDEE 120

[Close]
BLAST of Cp4.1LG02g15520 vs. ExPASy TrEMBL
Match: A0A6A6N3L5 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_015881 PE=3 SV=1)

HSP 1 Score: 209 bits (533), Expect = 5.19e-68
Identity = 107/121 (88.43%), Postives = 114/121 (94.21%), Query Frame = 0 

Query: 1   MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVK 60
           MAD++ K RK +VVTREYT+NLHKRLHGCTFKKKAPKAIKE+RKFAQ AMGTTDVRVDVK
Sbjct: 1   MADRAGKGRKEDVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVK 60

Query: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVAEVPAEGFKGLDTKVIDEE 120
           LNKH+WSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTV EVP EGFKGL TKVIDEE
Sbjct: 61  LNKHVWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVTEVPPEGFKGLGTKVIDEE 120

[Close]
BLAST of Cp4.1LG02g15520 vs. ExPASy TrEMBL
Match: A0A218X1Y2 (60S ribosomal protein L31 OS=Punica granatum OX=22663 GN=LOC116211037 PE=3 SV=1)

HSP 1 Score: 209 bits (532), Expect = 7.37e-68
Identity = 106/121 (87.60%), Postives = 114/121 (94.21%), Query Frame = 0 

Query: 1   MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVK 60
           MAD+ +K RK EVVTREYT+NLHKRLHGCTFKKKAPKAIKE+RKFAQ AMGTTDVRVDVK
Sbjct: 1   MADRKSKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVK 60

Query: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVAEVPAEGFKGLDTKVIDEE 120
           LNKH+WSRGIRSVPRRVRVR+ARKRNDEEDAKEEFYSLVTVAE+P EG KGL TKVIDEE
Sbjct: 61  LNKHVWSRGIRSVPRRVRVRVARKRNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEE 120

[Close]
BLAST of Cp4.1LG02g15520 vs. TAIR 10
Match: AT5G56710.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 189.9 bits (481), Expect = 1.2e-48
Identity = 91/115 (79.13%), Postives = 104/115 (90.43%), Query Frame = 0 

Query: 7   KARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIW 66
           K RK EV+TREYT+NLH+RLH CTFKKKAPKAIKE+RKFA+ AMGT DVRVDVKLNK IW
Sbjct: 5   KGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIW 64

Query: 67  SRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVAEVPAEGFKGLDTKVIDEEE 122
           S+GIR  PRR+RVR+ARKRND+EDAKEEF+SLVTVAE+PAEG  GL TKVI+EE+
Sbjct: 65  SKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119

[Close]
BLAST of Cp4.1LG02g15520 vs. TAIR 10
Match: AT2G19740.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 188.7 bits (478), Expect = 2.7e-48
Identity = 92/118 (77.97%), Postives = 103/118 (87.29%), Query Frame = 0 

Query: 4   KSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNK 63
           +  K RK EVVTREYT+NLH+RLH CTFKKKAP AIKE+RKFA  AMGT DVRVDVKLNK
Sbjct: 2   EKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLNK 61

Query: 64  HIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVAEVPAEGFKGLDTKVIDEEE 122
            IWS+GIR  PRR+RVR+ARKRND+EDAKEEF+SLVTVAE+PAEG  GL TKVI+EEE
Sbjct: 62  QIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE 119

[Close]
BLAST of Cp4.1LG02g15520 vs. TAIR 10
Match: AT4G26230.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 188.7 bits (478), Expect = 2.7e-48
Identity = 90/115 (78.26%), Postives = 103/115 (89.57%), Query Frame = 0 

Query: 7   KARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIW 66
           K RK EVVTREYT+NLH+RLH CTFKKKAPKAIKE+RKFA+  MGT DVRVDVKLNK IW
Sbjct: 5   KGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLNKQIW 64

Query: 67  SRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVAEVPAEGFKGLDTKVIDEEE 122
           S+GIR  PRR+RVR+ARKRND+EDAKEEF+SLVTVAE+PAEG  GL TK+I+EE+
Sbjct: 65  SKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED 119

[Close]
BLAST of Cp4.1LG02g15520 vs. TAIR 10
Match: AT5G56710.2 (Ribosomal protein L31e family protein )

HSP 1 Score: 117.5 bits (293), Expect = 7.7e-27
Identity = 64/115 (55.65%), Postives = 73/115 (63.48%), Query Frame = 0 

Query: 7   KARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIW 66
           K RK EV+TREYT+NLH+RLH CTFKKKAPKAIKE+RKFA+ AMGT DVRVD        
Sbjct: 5   KGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVD-------- 64

Query: 67  SRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVAEVPAEGFKGLDTKVIDEEE 122
                                     EEF+SLVTVAE+PAEG  GL TKVI+EE+
Sbjct: 65  --------------------------EEFFSLVTVAEIPAEGLSGLGTKVIEEED 85

The following BLAST results are available for this feature:
BLAST of Cp4.1LG02g15520 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M5731.6e-5385.9560S ribosomal protein L31 OS=Perilla frutescens OX=48386 GN=RPL31 PE=2 SV=1[more]
P462901.4e-4981.8260S ribosomal protein L31 OS=Nicotiana glutinosa OX=35889 GN=RPL31 PE=2 SV=1[more]
P514201.7e-4779.1360S ribosomal protein L31-3 OS=Arabidopsis thaliana OX=3702 GN=RPL31C PE=3 SV=2[more]
O650712.2e-4776.2760S ribosomal protein L31 OS=Picea mariana OX=3335 GN=RPL31 PE=2 SV=1[more]
Q9SLL73.8e-4777.9760S ribosomal protein L31-1 OS=Arabidopsis thaliana OX=3702 GN=RPL31A PE=3 SV=1[more]
BLAST of Cp4.1LG02g15520 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023525745.14.53e-76100.0060S ribosomal protein L31-like [Cucurbita pepo subsp. pepo][more]
XP_038903425.19.56e-7195.0460S ribosomal protein L31 [Benincasa hispida][more]
XP_022152572.11.36e-7095.0460S ribosomal protein L31 [Momordica charantia][more]
XP_012065534.11.85e-6889.2660S ribosomal protein L31 [Jatropha curcas] >KDP43449.1 hypothetical protein JCG... [more]
XP_021658421.11.85e-6890.0860S ribosomal protein L31 [Hevea brasiliensis] >ADR71260.1 60S ribosomal protein... [more]
BLAST of Cp4.1LG02g15520 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DGM16.57e-7195.0460S ribosomal protein L31 OS=Momordica charantia OX=3673 GN=LOC111020269 PE=3 SV... [more]
A0A067LGY18.97e-6989.26Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16736 PE=3 SV=1[more]
I3NMM38.97e-6990.0860S ribosomal protein L31A OS=Hevea brasiliensis OX=3981 GN=RPL31A PE=2 SV=1[more]
A0A6A6N3L55.19e-6888.43Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_015881 PE=3 SV=1[more]
A0A218X1Y27.37e-6887.6060S ribosomal protein L31 OS=Punica granatum OX=22663 GN=LOC116211037 PE=3 SV=1[more]
BLAST of Cp4.1LG02g15520 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G56710.11.2e-4879.13Ribosomal protein L31e family protein [more]
AT2G19740.12.7e-4877.97Ribosomal protein L31e family protein [more]
AT4G26230.12.7e-4878.26Ribosomal protein L31e family protein [more]
AT5G56710.27.7e-2755.65Ribosomal protein L31e family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000054Ribosomal protein L31eSMARTSM01380Ribosomal_L31e_2coord: 11..94
e-value: 2.0E-46
score: 170.2
IPR000054Ribosomal protein L31ePFAMPF01198Ribosomal_L31ecoord: 12..93
e-value: 1.6E-40
score: 137.2
IPR000054Ribosomal protein L31ePANTHERPTHR1095660S RIBOSOMAL PROTEIN L31coord: 1..121
IPR000054Ribosomal protein L31eCDDcd00463Ribosomal_L31ecoord: 10..93
e-value: 3.74275E-24
score: 86.4692
IPR023621Ribosomal protein L31e domain superfamilyGENE3D3.10.440.10coord: 8..121
e-value: 7.1E-49
score: 166.4
IPR023621Ribosomal protein L31e domain superfamilySUPERFAMILY54575Ribosomal protein L31ecoord: 12..93
NoneNo IPR availablePANTHERPTHR10956:SF4060S RIBOSOMAL PROTEIN L31coord: 1..121
IPR020052Ribosomal protein L31e, conserved sitePROSITEPS01144RIBOSOMAL_L31Ecoord: 55..69

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g15520.1Cp4.1LG02g15520.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome