Cp4.1LG02g14780 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g14780
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	methyl-CpG-binding domain-containing protein 11-like
Location	Cp4.1LG02: 13741573 .. 13744716 (-)
RNA-Seq Expression	Cp4.1LG02g14780
Synteny	Cp4.1LG02g14780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGTGTCAGATGGGTTTTGGATTTTGAACTTTGCCTTTGCGGTGAAGGTAAGTTTAGCACAGCCCTTGTGGGATTTTAGGACTAACCACCAAAAAGGCACCCTTCAGAGACTCTCTCTCAACGGTTTATGTGTTCTTTTTTGGCCACAAGACCAAAAACTGGAGAGAAGAGAGATAAGTTAGACAGATTTCTAGAGAGAGAAAGTGAGAAAAAATGGAGAACAAAGAGGAAGCCATGCTGATAATGGAAGATGAAGCTCAAACTAAGAGTAGAGAAGGAGTAGCAGCCATGGATGAAGTCATTTCTGTGGAGCTTCCTGCCCCACCTGCTTGGAAGAAACTGGTCTCTCTCTCTCTCTTTAAAAGTTTCAAATTTTCTCTAAATTTAGGCCCTTTTTTGCCAGAAAGAAGCTTTTATCCTCTCGATATTGCAGTTTTTGTGTCTGTTCTTGTGAATTTCATCTCAAATGTTCTGTTTTTGTGTTAAAGTTTGTGTTTTTTTTGGGGGGGGGATTTAGAACTCTGTTTTTAGCTCTAGGGCTTGTTTGCATGGTTAGGGTTCTGTTACATCCTTAATTCCTTGTCTTTTGGAAGCTGTCTTGTTGAACAGTTGATTCTTTTTTTGTGGGTAGAATTGTTGAAAATTTAGGTGTTTCTTTGGTGCTTCTTTTCCCTGAGTTCTTCGTTTTTTATTTTCAAAGATTGGGTATGAAATGTAAGCTCATGGGGAATCTTTTGGATTTTGAAGTGAAAAACGAGCTTCTATGAAGTTCTAGATGATGAATATCTATGAAAGAGCTTCTGTTTGATTGAAAACAAGGAACTGTTTGTACCATTTGACCTGCTGGAGTGTTTTACTTAAGAGTGTTAACCTGAGATCCCACGACGGTTGGAGAGGAGAACGAAACATTCTTTATATGGGTGTGGAAATTTCTCACTAGCATACGCGTTTTAAAAACCTTGAGAGAAAGTCTAAAGAAGACAATATTGGCTAGTGGTAGGCTTGGGCTGTTGCAGTTAAGTTTTCTCGGCTTCTTGTCTCGGCTTCTTGAATGATAGCACGTGGTGTCATGTGTTTGAGATACTTGGAAAGCTTCATCTTGGGAAGCACTTTTGAAACTGTCGGTGCCTAAAGCTGTCTGCTCTTTAGGGCTGCAATAGAAAACTGAATCCAATGCTTTTGATCTGAGGCCTACATGTTTTTAACCTAAGTTCAGGCTGTTTTTGAAGTGTTATATGAATCATGCTGAGGAGTTTTGTGGCTTTTATTGTATTAGCTGTCGTGATCAAATGATTGTATGAACTATGAAGCTTGTCAGTTCTTGATGTTTTATCAAAACTCCTATTGTAACACGGTTTGCTGTTGGAGATAGCTTCGATTCTTCGAAACAGTGAAATCTACCATGGTTTTTTCTCCACGGTGTTGAATATTGATTGTAATAGTCCAAGCTCACCACTAGTAGATATTGTCCATTTTGGCCTGTTACGTATCACCGTCAGTCTCATGGTTTTGAAACGCGTCTATTAGGGAGAGGTTCCACACCCTTATAAGAAATGCTTTGTTCCCCTTTCCAACCGACGTGGGATCTCATAATGATAGTTGTTCAACTCGCCCCCATCTATCCCTGCCATCTTTTCCATGTTTGTTATGTAACAGCCCAAGCCCACCGGTAACAAATATTGTCCTCTTTGAGCCCGGACTTCCCTTTAAGGTTTTAAAACGCATCCACTAGGGAGAGGCTTCCACACCCTTATAAGAAATGTTTCGTTTCTCTCTCCAACCGATGTGGGATCTCACACTTCAGGTTCATGCATGTTGTATTCTGAAATCTGCCAAACTCTCGACCTTTTGCGTATATGGATCTTCTCCTTTTGGAAGATTTTCATGTTATGACTAACAAATTGTTTTTCTTGTTTCAGTTCATACCCAAGAGGGCAGGTACACCAAGAAAGAGTGAGATTGTATTCATTGCTCCAACTGGTGAAGAAATTGGTAACAGGAAACTGCTGGAGCAGTACCTAAAATTGCATCCTGGTAGTCCTGCAATATCGGAGTTCGATTGGAGCACGGGTGAGGCGCCTAGAAGATCAGTAAGGATTAGTGAGAAGGTTAAGGAAACTCCGCCTAAAGAGGAGCCTGCGAAGAAACGGAGCCGAAAATCCTCCGGTTCGAAGAAAGACATGAAGGAGGAAGCTGATGCAGTTCCTAAAGTTCCTGAAGAAGTTGAAATGAAAGATGCAGAGGGGAATGACAAGGCGGGTGCATATGTTGGTGAAGCTGAAAATGGTCAAACAGAACACCAGGAGATGGCTCCTGAGGCGAAAGAAGGTGAAAAACAAGTTCTCAAGGGAAGTTCCGAGGTCGATGTTAACTCTGAATTTGTCGGTAAAGACGAAACGGATAAGAATGGTGGTGAAACCGACGGTCGAGGTTACATTCAAGAAGCTGAAAAGCAAGGAAATGATGTAGCAGAAACAGTCTCACCTAATGAGCATACTGTTGCTACTGAGGTTAACCAATCTGAAAAAGAGACAGACCAAGAAAACAACAATCCCGACAAGGATGACAACGATGACAACGATCCTGGCAATGTCGTTGTTCTACAAGCGAAAGGAGTCGTCGAGGAAGAGAAACAAAATGATCTGAATGAAGCAGCAGCACCAGAAGACAATGAAGCTAAGTGTAATCACGACGTTTCAACAAATGGTGCAGCTCATGCCGAGGACCGAACCATCGAAGACAATAACTTGGCGAAAGAAAACGGGAAGCTTTAGCTAAGACAGACCGAGGAATAGATGCAGCAGTGCATACCACAACCGCCTGCAGACTGCTGTTTTATGCCTACTTCCCATCACCATTTGGCGGTCTTGACACCAGATCTTTGTAGCAACTGCTTACTCTCTTCCACGATGACAGTAACTTTAGTATGTCTTAGCTTTAGTTTTACGAATGTATTTACCGAAAAGAGAACTCTTAGTTGTCAGAATTAGAGTTTAGAATCTGCAGCTTTTGTTGTTTTTGCTTACTGAACTTCTTTTGACTGTAGAATGTTACTGTTAATCAACCTTCTAATTTAACTTCAGGTGAAACATGTTCTTCTGTTTCTTACTGCTGCTGTTTTTGCTCTTTTCTTTCTCAATGATC

mRNA sequence

AAGTGTCAGATGGGTTTTGGATTTTGAACTTTGCCTTTGCGGTGAAGGTAAGTTTAGCACAGCCCTTGTGGGATTTTAGGACTAACCACCAAAAAGGCACCCTTCAGAGACTCTCTCTCAACGGTTTATGTGTTCTTTTTTGGCCACAAGACCAAAAACTGGAGAGAAGAGAGATAAGTTAGACAGATTTCTAGAGAGAGAAAGTGAGAAAAAATGGAGAACAAAGAGGAAGCCATGCTGATAATGGAAGATGAAGCTCAAACTAAGAGTAGAGAAGGAGTAGCAGCCATGGATGAAGTCATTTCTGTGGAGCTTCCTGCCCCACCTGCTTGGAAGAAACTGTTCATACCCAAGAGGGCAGGTACACCAAGAAAGAGTGAGATTGTATTCATTGCTCCAACTGGTGAAGAAATTGGTAACAGGAAACTGCTGGAGCAGTACCTAAAATTGCATCCTGGTAGTCCTGCAATATCGGAGTTCGATTGGAGCACGGGTGAGGCGCCTAGAAGATCAGTAAGGATTAGTGAGAAGGTTAAGGAAACTCCGCCTAAAGAGGAGCCTGCGAAGAAACGGAGCCGAAAATCCTCCGGTTCGAAGAAAGACATGAAGGAGGAAGCTGATGCAGTTCCTAAAGTTCCTGAAGAAGTTGAAATGAAAGATGCAGAGGGGAATGACAAGGCGGGTGCATATGTTGGTGAAGCTGAAAATGGTCAAACAGAACACCAGGAGATGGCTCCTGAGGCGAAAGAAGGTGAAAAACAAGTTCTCAAGGGAAGTTCCGAGGTCGATGTTAACTCTGAATTTGTCGGTAAAGACGAAACGGATAAGAATGGTGGTGAAACCGACGGTCGAGGTTACATTCAAGAAGCTGAAAAGCAAGGAAATGATGTAGCAGAAACAGTCTCACCTAATGAGCATACTGTTGCTACTGAGGTTAACCAATCTGAAAAAGAGACAGACCAAGAAAACAACAATCCCGACAAGGATGACAACGATGACAACGATCCTGGCAATGTCGTTGTTCTACAAGCGAAAGGAGTCGTCGAGGAAGAGAAACAAAATGATCTGAATGAAGCAGCAGCACCAGAAGACAATGAAGCTAAGTGTAATCACGACGTTTCAACAAATGGTGCAGCTCATGCCGAGGACCGAACCATCGAAGACAATAACTTGGCGAAAGAAAACGGGAAGCTTTAGCTAAGACAGACCGAGGAATAGATGCAGCAGTGCATACCACAACCGCCTGCAGACTGCTGTTTTATGCCTACTTCCCATCACCATTTGGCGGTCTTGACACCAGATCTTTGTAGCAACTGCTTACTCTCTTCCACGATGACAGTAACTTTAGTATGTCTTAGCTTTAGTTTTACGAATGTATTTACCGAAAAGAGAACTCTTAGTTGTCAGAATTAGAGTTTAGAATCTGCAGCTTTTGTTGTTTTTGCTTACTGAACTTCTTTTGACTGTAGAATGTTACTGTTAATCAACCTTCTAATTTAACTTCAGGTGAAACATGTTCTTCTGTTTCTTACTGCTGCTGTTTTTGCTCTTTTCTTTCTCAATGATC

Coding sequence (CDS)

ATGGAGAACAAAGAGGAAGCCATGCTGATAATGGAAGATGAAGCTCAAACTAAGAGTAGAGAAGGAGTAGCAGCCATGGATGAAGTCATTTCTGTGGAGCTTCCTGCCCCACCTGCTTGGAAGAAACTGTTCATACCCAAGAGGGCAGGTACACCAAGAAAGAGTGAGATTGTATTCATTGCTCCAACTGGTGAAGAAATTGGTAACAGGAAACTGCTGGAGCAGTACCTAAAATTGCATCCTGGTAGTCCTGCAATATCGGAGTTCGATTGGAGCACGGGTGAGGCGCCTAGAAGATCAGTAAGGATTAGTGAGAAGGTTAAGGAAACTCCGCCTAAAGAGGAGCCTGCGAAGAAACGGAGCCGAAAATCCTCCGGTTCGAAGAAAGACATGAAGGAGGAAGCTGATGCAGTTCCTAAAGTTCCTGAAGAAGTTGAAATGAAAGATGCAGAGGGGAATGACAAGGCGGGTGCATATGTTGGTGAAGCTGAAAATGGTCAAACAGAACACCAGGAGATGGCTCCTGAGGCGAAAGAAGGTGAAAAACAAGTTCTCAAGGGAAGTTCCGAGGTCGATGTTAACTCTGAATTTGTCGGTAAAGACGAAACGGATAAGAATGGTGGTGAAACCGACGGTCGAGGTTACATTCAAGAAGCTGAAAAGCAAGGAAATGATGTAGCAGAAACAGTCTCACCTAATGAGCATACTGTTGCTACTGAGGTTAACCAATCTGAAAAAGAGACAGACCAAGAAAACAACAATCCCGACAAGGATGACAACGATGACAACGATCCTGGCAATGTCGTTGTTCTACAAGCGAAAGGAGTCGTCGAGGAAGAGAAACAAAATGATCTGAATGAAGCAGCAGCACCAGAAGACAATGAAGCTAAGTGTAATCACGACGTTTCAACAAATGGTGCAGCTCATGCCGAGGACCGAACCATCGAAGACAATAACTTGGCGAAAGAAAACGGGAAGCTTTAG

Protein sequence

MENKEEAMLIMEDEAQTKSREGVAAMDEVISVELPAPPAWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVKETPPKEEPAKKRSRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGAYVGEAENGQTEHQEMAPEAKEGEKQVLKGSSEVDVNSEFVGKDETDKNGGETDGRGYIQEAEKQGNDVAETVSPNEHTVATEVNQSEKETDQENNNPDKDDNDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCNHDVSTNGAAHAEDRTIEDNNLAKENGKL

Homology

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BLAST of Cp4.1LG02g14780 vs. ExPASy Swiss-Prot
Match: Q9LW00 (Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=MBD11 PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 8.4e-33
Identity = 107/251 (42.63%), Postives = 143/251 (56.97%), Query Frame = 0


Query: 27  DEVISVELPAPPAWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAI 86
           +EV+SVELPAP +WKKLF P + G+ +K+E+VF+APTGEEI NRK LEQYLK HPG+PAI
Sbjct: 5   EEVVSVELPAPSSWKKLFYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNPAI 64

Query: 87  SEFDWSTGEAPRRSVRISEKVKETP-PKEEPAKKRSR-KSSGSKKDMKEEADAVPKVPEE 146
           +EFDW+T   PRRS RISEK K TP P +EP KKR R KS  SKKD + E  +     E 
Sbjct: 65  AEFDWTTSGTPRRSARISEKTKATPSPDKEPPKKRGRTKSPVSKKDAEGE-KSEGGGEEN 124

Query: 147 VEMKDAEGNDKAGAYVGEAEN-------GQTEH-------------QEMAPEAKEGEKQV 206
             +KD E N   G  + E EN       G+TE                 AP  +EGE   
Sbjct: 125 SHVKDTEMNPPEG--IAENENVTDKNGSGETERVNDAKENIVAEETPNAAPVQEEGESMK 184

Query: 207 LKGSSEVDVNSEFVGKDE----TDKNGGETDGRGYIQEAEKQGNDVAETVSPNEHTVATE 252
            K    VD  S+   K++     +KN  + + +  ++ ++++ N  AET +  E+ + TE
Sbjct: 185 EKALDSVDDKSKETDKEKDTGSIEKNSVDVE-KKTVEASDEKKNSEAETRNHEENGLTTE 244

[Close]

BLAST of Cp4.1LG02g14780 vs. ExPASy Swiss-Prot
Match: Q9XI36 (Methyl-CpG-binding domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=MBD10 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.4e-32
Identity = 129/345 (37.39%), Postives = 176/345 (51.01%), Query Frame = 0


Query: 27  DEVISVELPAPPAWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAI 86
           DE++S+ELPAP +WKKLF PKRAGTPRK+EIVF+APTGEEI +RK LEQYLK HPG+P I
Sbjct: 5   DELVSIELPAPASWKKLFYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKAHPGNPVI 64

Query: 87  SEFDWSTGEAPRRSVRISEKVKET--PPKEEPAKKRSRKSSGSKKDMKE----------- 146
           SEF+W+TGE PRRS RIS+KVK T   P +EP  K+ R+SS +KKD KE           
Sbjct: 65  SEFEWTTGETPRRSSRISQKVKATTPTPDKEPLLKK-RRSSLTKKDNKEAAEKNEEAAVK 124

Query: 147 --------------------EADAVPKVPE------EVEMKDAEGNDKAGAYVGEAENGQ 206
                               E + V ++ E      E E  +AE  +K G      + GQ
Sbjct: 125 ENMDVDKDGKTENAEAEKEKEKEGVTEIAEAEKENNEGEKTEAEKVNKEGEKTEAGKEGQ 184

Query: 207 TEHQEMAPEAKEGEKQVLKGSSEVDV-----NSEFVGKDETDKNGGETDGRGYIQEAEKQ 266
           TE  E A + KEGEK   + + E +V      S  V   E +K  G  +G     E   +
Sbjct: 185 TEIAE-AEKEKEGEKAEAE-NKEAEVVRDKKESMEVDTSELEKKAGSGEG----AEEPSK 244

Query: 267 GNDVAETVSPNEHTVATEVNQSEKETDQENNNPDKDDNDDNDPGNVVV----LQA----- 319
              + +T       V TE +  +K  +++  N      + N   NV +    L A     
Sbjct: 245 VEGLKDTEMKEAQEVVTEADVEKKPAEEKTENKGSVTTEANGEQNVTLGEPNLDADAEAD 304

[Close]

BLAST of Cp4.1LG02g14780 vs. NCBI nr
Match: XP_023525889.1 (methyl-CpG-binding domain-containing protein 11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 615 bits (1587), Expect = 1.41e-221
Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 0


Query: 1   MENKEEAMLIMEDEAQTKSREGVAAMDEVISVELPAPPAWKKLFIPKRAGTPRKSEIVFI 60
           MENKEEAMLIMEDEAQTKSREGVAAMDEVISVELPAPPAWKKLFIPKRAGTPRKSEIVFI
Sbjct: 1   MENKEEAMLIMEDEAQTKSREGVAAMDEVISVELPAPPAWKKLFIPKRAGTPRKSEIVFI 60

Query: 61  APTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVKETPPKEEPAKKR 120
           APTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVKETPPKEEPAKKR
Sbjct: 61  APTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVKETPPKEEPAKKR 120

Query: 121 SRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGAYVGEAENGQTEHQEMAPEAKEG 180
           SRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGAYVGEAENGQTEHQEMAPEAKEG
Sbjct: 121 SRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGAYVGEAENGQTEHQEMAPEAKEG 180

Query: 181 EKQVLKGSSEVDVNSEFVGKDETDKNGGETDGRGYIQEAEKQGNDVAETVSPNEHTVATE 240
           EKQVLKGSSEVDVNSEFVGKDETDKNGGETDGRGYIQEAEKQGNDVAETVSPNEHTVATE
Sbjct: 181 EKQVLKGSSEVDVNSEFVGKDETDKNGGETDGRGYIQEAEKQGNDVAETVSPNEHTVATE 240

Query: 241 VNQSEKETDQENNNPDKDDNDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCNH 300
           VNQSEKETDQENNNPDKDDNDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCNH
Sbjct: 241 VNQSEKETDQENNNPDKDDNDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCNH 300

Query: 301 DVSTNGAAHAEDRTIEDNNLAKENGKL 327
           DVSTNGAAHAEDRTIEDNNLAKENGKL
Sbjct: 301 DVSTNGAAHAEDRTIEDNNLAKENGKL 327

[Close]

BLAST of Cp4.1LG02g14780 vs. NCBI nr
Match: XP_022998317.1 (methyl-CpG-binding domain-containing protein 11-like [Cucurbita maxima])

HSP 1 Score: 579 bits (1492), Expect = 3.78e-207
Identity = 309/327 (94.50%), Postives = 317/327 (96.94%), Query Frame = 0


Query: 1   MENKEEAMLIMEDEAQTKSREGVAAMDEVISVELPAPPAWKKLFIPKRAGTPRKSEIVFI 60
           MENKEEAMLI+EDEAQTKSREGVAAMDEVISVELPAPP WKKLFIPK+AGTPRKSEIVFI
Sbjct: 1   MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKKAGTPRKSEIVFI 60

Query: 61  APTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVKETPPKEEPAKKR 120
           APTGEEIGNRKLLEQYLKLH GSPAISEFDWSTGEAPRRSVRISEKVKETPPKEEP KKR
Sbjct: 61  APTGEEIGNRKLLEQYLKLHSGSPAISEFDWSTGEAPRRSVRISEKVKETPPKEEPPKKR 120

Query: 121 SRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGAYVGEAENGQTEHQEMAPEAKEG 180
           SRKSSGSKKDMKEEADAVP+VPEEVEMKDAEGNDKAG YVGEAENGQTEHQEMAPEAKEG
Sbjct: 121 SRKSSGSKKDMKEEADAVPEVPEEVEMKDAEGNDKAGGYVGEAENGQTEHQEMAPEAKEG 180

Query: 181 EKQVLKGSSEVDVNSEFVGKDETDKNGGETDGRGYIQEAEKQGNDVAETVSPNEHTVATE 240
           EKQVL+GSSEVDVNSEF GKDETDKNGG+TDGRGYIQEAEKQGNDVAETVSPNEHTVATE
Sbjct: 181 EKQVLEGSSEVDVNSEFFGKDETDKNGGKTDGRGYIQEAEKQGNDVAETVSPNEHTVATE 240

Query: 241 VNQSEKETDQENNNPDKDDNDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCNH 300
           VNQSEKETDQENN PDKDDND   PGNV+VLQAKGVVEEEKQNDLNEAAAPEDNE KCNH
Sbjct: 241 VNQSEKETDQENNIPDKDDND---PGNVIVLQAKGVVEEEKQNDLNEAAAPEDNEGKCNH 300

Query: 301 DVSTNGAAHAEDRTIEDNNLAKENGKL 327
           DVSTNGAAHAEDR+IED+NLAKENGKL
Sbjct: 301 DVSTNGAAHAEDRSIEDDNLAKENGKL 324

[Close]

BLAST of Cp4.1LG02g14780 vs. NCBI nr
Match: XP_022948683.1 (methyl-CpG-binding domain-containing protein 11-like [Cucurbita moschata])

HSP 1 Score: 579 bits (1492), Expect = 4.38e-207
Identity = 311/331 (93.96%), Postives = 319/331 (96.37%), Query Frame = 0


Query: 1   MENKEEAMLIMEDEAQTKSREGVAAMDEVISVELPAPPAWKKLFIPKRAGTPRKSEIVFI 60
           MENKEEAMLI+EDEAQTKSREGVAAMDEVISVELPAPP WKKLFIPKRAGTPRKSEIVFI
Sbjct: 1   MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFI 60

Query: 61  APTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVKETPPKEEPAKKR 120
           APTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVKETPPKEEP KKR
Sbjct: 61  APTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVKETPPKEEPPKKR 120

Query: 121 SRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGAYVGEAENGQTEHQ----EMAPE 180
           SRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAG YVGEAENGQTEHQ    EMAPE
Sbjct: 121 SRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGGYVGEAENGQTEHQAATEEMAPE 180

Query: 181 AKEGEKQVLKGSSEVDVNSEFVGKDETDKNGGETDGRGYIQEAEKQGNDVAETVSPNEHT 240
            KE EKQVLKGSS+VDVNSEFVGKDETDKNGGETDGRGYI+EAEKQGNDVAETVSPNEHT
Sbjct: 181 VKEDEKQVLKGSSDVDVNSEFVGKDETDKNGGETDGRGYIEEAEKQGNDVAETVSPNEHT 240

Query: 241 VATEVNQSEKETDQENNNPDKDDNDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEA 300
           VATEVN+SEKETDQENNNPDKDDND   PGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEA
Sbjct: 241 VATEVNKSEKETDQENNNPDKDDND---PGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEA 300

Query: 301 KCNHDVSTNGAAHAEDRTIEDNNLAKENGKL 327
           KCNHDVSTNGAAHAEDR+I+D+N+AKENGKL
Sbjct: 301 KCNHDVSTNGAAHAEDRSIKDDNMAKENGKL 328

[Close]

BLAST of Cp4.1LG02g14780 vs. NCBI nr
Match: KAG7036510.1 (Methyl-CpG-binding domain-containing protein 10 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 569 bits (1467), Expect = 2.82e-203
Identity = 308/331 (93.05%), Postives = 316/331 (95.47%), Query Frame = 0


Query: 1   MENKEEAMLIMEDEAQTKSREGVAAMDEVISVELPAPPAWKKLFIPKRAGTPRKSEIVFI 60
           MENKEEAMLI+EDEAQTKSREGVAAMDEVISVELPAPP WKKLFIPKRAGTPRKSEIVFI
Sbjct: 1   MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFI 60

Query: 61  APTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVKETPPKEEPAKKR 120
           APTGEEIGNRKLLEQYLKLHPGS AISEFDWSTGEAPRRSVRISEKVKETPPKEEP KKR
Sbjct: 61  APTGEEIGNRKLLEQYLKLHPGSLAISEFDWSTGEAPRRSVRISEKVKETPPKEEPPKKR 120

Query: 121 SRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGAYVGEAENGQTEHQ----EMAPE 180
           SRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGND+AG YVGEAENGQTEHQ    EMAPE
Sbjct: 121 SRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDRAGGYVGEAENGQTEHQAATEEMAPE 180

Query: 181 AKEGEKQVLKGSSEVDVNSEFVGKDETDKNGGETDGRGYIQEAEKQGNDVAETVSPNEHT 240
            KE EKQVLKGSS+VDVNSEFVGKDETDKNGGETDGRGYI+EAEKQGNDV ETVSPNEHT
Sbjct: 181 VKEDEKQVLKGSSDVDVNSEFVGKDETDKNGGETDGRGYIEEAEKQGNDVVETVSPNEHT 240

Query: 241 VATEVNQSEKETDQENNNPDKDDNDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEA 300
           VATEVNQSEKET+QENN PDKD+ND   PGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEA
Sbjct: 241 VATEVNQSEKETNQENNIPDKDEND---PGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEA 300

Query: 301 KCNHDVSTNGAAHAEDRTIEDNNLAKENGKL 327
           KCNHDVSTNGAAHAEDR+IED+NLAKENGKL
Sbjct: 301 KCNHDVSTNGAAHAEDRSIEDDNLAKENGKL 328

[Close]

BLAST of Cp4.1LG02g14780 vs. NCBI nr
Match: KAG6606799.1 (Methyl-CpG-binding domain-containing protein 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 568 bits (1463), Expect = 1.15e-202
Identity = 307/331 (92.75%), Postives = 315/331 (95.17%), Query Frame = 0


Query: 1   MENKEEAMLIMEDEAQTKSREGVAAMDEVISVELPAPPAWKKLFIPKRAGTPRKSEIVFI 60
           MENKEEAMLI+EDEAQTKSREGVAAMDEVISVELPAPP WKKLFIPKRAGTPRKSEIVFI
Sbjct: 1   MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFI 60

Query: 61  APTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVKETPPKEEPAKKR 120
           APTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVKETPPKEEP KKR
Sbjct: 61  APTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVKETPPKEEPPKKR 120

Query: 121 SRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGAYVGEAENGQTEHQ----EMAPE 180
           SRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGND+A  YVGEAENGQTEHQ    EMAPE
Sbjct: 121 SRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDRASGYVGEAENGQTEHQAATEEMAPE 180

Query: 181 AKEGEKQVLKGSSEVDVNSEFVGKDETDKNGGETDGRGYIQEAEKQGNDVAETVSPNEHT 240
            KE EKQVLKGSS+VDVNSEFVGKDETDKNGGETDGRGYI+EAEKQGNDV ETVSPNEHT
Sbjct: 181 VKEDEKQVLKGSSDVDVNSEFVGKDETDKNGGETDGRGYIEEAEKQGNDVVETVSPNEHT 240

Query: 241 VATEVNQSEKETDQENNNPDKDDNDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEA 300
           VATEVNQSEKET+QENN PDKD+ND   PGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEA
Sbjct: 241 VATEVNQSEKETNQENNIPDKDEND---PGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEA 300

Query: 301 KCNHDVSTNGAAHAEDRTIEDNNLAKENGKL 327
           KCNHDVSTNGAAHAEDR+IED+NLAKEN KL
Sbjct: 301 KCNHDVSTNGAAHAEDRSIEDDNLAKENRKL 328

[Close]

BLAST of Cp4.1LG02g14780 vs. ExPASy TrEMBL
Match: A0A6J1K7L8 (methyl-CpG-binding domain-containing protein 11-like OS=Cucurbita maxima OX=3661 GN=LOC111492990 PE=4 SV=1)

HSP 1 Score: 579 bits (1492), Expect = 1.83e-207
Identity = 309/327 (94.50%), Postives = 317/327 (96.94%), Query Frame = 0


Query: 1   MENKEEAMLIMEDEAQTKSREGVAAMDEVISVELPAPPAWKKLFIPKRAGTPRKSEIVFI 60
           MENKEEAMLI+EDEAQTKSREGVAAMDEVISVELPAPP WKKLFIPK+AGTPRKSEIVFI
Sbjct: 1   MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKKAGTPRKSEIVFI 60

Query: 61  APTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVKETPPKEEPAKKR 120
           APTGEEIGNRKLLEQYLKLH GSPAISEFDWSTGEAPRRSVRISEKVKETPPKEEP KKR
Sbjct: 61  APTGEEIGNRKLLEQYLKLHSGSPAISEFDWSTGEAPRRSVRISEKVKETPPKEEPPKKR 120

Query: 121 SRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGAYVGEAENGQTEHQEMAPEAKEG 180
           SRKSSGSKKDMKEEADAVP+VPEEVEMKDAEGNDKAG YVGEAENGQTEHQEMAPEAKEG
Sbjct: 121 SRKSSGSKKDMKEEADAVPEVPEEVEMKDAEGNDKAGGYVGEAENGQTEHQEMAPEAKEG 180

Query: 181 EKQVLKGSSEVDVNSEFVGKDETDKNGGETDGRGYIQEAEKQGNDVAETVSPNEHTVATE 240
           EKQVL+GSSEVDVNSEF GKDETDKNGG+TDGRGYIQEAEKQGNDVAETVSPNEHTVATE
Sbjct: 181 EKQVLEGSSEVDVNSEFFGKDETDKNGGKTDGRGYIQEAEKQGNDVAETVSPNEHTVATE 240

Query: 241 VNQSEKETDQENNNPDKDDNDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCNH 300
           VNQSEKETDQENN PDKDDND   PGNV+VLQAKGVVEEEKQNDLNEAAAPEDNE KCNH
Sbjct: 241 VNQSEKETDQENNIPDKDDND---PGNVIVLQAKGVVEEEKQNDLNEAAAPEDNEGKCNH 300

Query: 301 DVSTNGAAHAEDRTIEDNNLAKENGKL 327
           DVSTNGAAHAEDR+IED+NLAKENGKL
Sbjct: 301 DVSTNGAAHAEDRSIEDDNLAKENGKL 324

[Close]

BLAST of Cp4.1LG02g14780 vs. ExPASy TrEMBL
Match: A0A6J1GA01 (methyl-CpG-binding domain-containing protein 11-like OS=Cucurbita moschata OX=3662 GN=LOC111452280 PE=4 SV=1)

HSP 1 Score: 579 bits (1492), Expect = 2.12e-207
Identity = 311/331 (93.96%), Postives = 319/331 (96.37%), Query Frame = 0


Query: 1   MENKEEAMLIMEDEAQTKSREGVAAMDEVISVELPAPPAWKKLFIPKRAGTPRKSEIVFI 60
           MENKEEAMLI+EDEAQTKSREGVAAMDEVISVELPAPP WKKLFIPKRAGTPRKSEIVFI
Sbjct: 1   MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFI 60

Query: 61  APTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVKETPPKEEPAKKR 120
           APTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVKETPPKEEP KKR
Sbjct: 61  APTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVKETPPKEEPPKKR 120

Query: 121 SRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGAYVGEAENGQTEHQ----EMAPE 180
           SRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAG YVGEAENGQTEHQ    EMAPE
Sbjct: 121 SRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGGYVGEAENGQTEHQAATEEMAPE 180

Query: 181 AKEGEKQVLKGSSEVDVNSEFVGKDETDKNGGETDGRGYIQEAEKQGNDVAETVSPNEHT 240
            KE EKQVLKGSS+VDVNSEFVGKDETDKNGGETDGRGYI+EAEKQGNDVAETVSPNEHT
Sbjct: 181 VKEDEKQVLKGSSDVDVNSEFVGKDETDKNGGETDGRGYIEEAEKQGNDVAETVSPNEHT 240

Query: 241 VATEVNQSEKETDQENNNPDKDDNDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEA 300
           VATEVN+SEKETDQENNNPDKDDND   PGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEA
Sbjct: 241 VATEVNKSEKETDQENNNPDKDDND---PGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEA 300

Query: 301 KCNHDVSTNGAAHAEDRTIEDNNLAKENGKL 327
           KCNHDVSTNGAAHAEDR+I+D+N+AKENGKL
Sbjct: 301 KCNHDVSTNGAAHAEDRSIKDDNMAKENGKL 328

[Close]

BLAST of Cp4.1LG02g14780 vs. ExPASy TrEMBL
Match: A0A6J1DJM3 (methyl-CpG-binding domain-containing protein 10-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021089 PE=4 SV=1)

HSP 1 Score: 369 bits (946), Expect = 4.00e-123
Identity = 242/415 (58.31%), Postives = 272/415 (65.54%), Query Frame = 0


Query: 1   MENKEEAMLIMEDEAQTKSREGVAAMDEVISVELPAPPAWKKLFIPKRAGTPRKSEIVFI 60
           ME+K E M ++E+EAQT+S  G  AMDE+ISVELPAPP WKKLFIPK+AGTPRKSEIVFI
Sbjct: 1   MESKAEVM-VLENEAQTES--GGGAMDELISVELPAPPTWKKLFIPKKAGTPRKSEIVFI 60

Query: 61  APTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVKETPPKEEPAKKR 120
           APTGEE  NRKLLEQYLK HPGSPA+SEFDWSTGE PRRS RISEKVK TPPKEEP +KR
Sbjct: 61  APTGEEFSNRKLLEQYLKSHPGSPAVSEFDWSTGETPRRSARISEKVKATPPKEEPPRKR 120

Query: 121 SRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGN--------------------------- 180
           SRKSSGSKKD KEEADA PKVPEE+EMKDAEGN                           
Sbjct: 121 SRKSSGSKKDNKEEADAAPKVPEEIEMKDAEGNEEIPVVEEDKDVYNDRQAENGDNLKDE 180

Query: 181 ----------------DKAGAYVGEAENGQTEH----QEMAPEAKEGEKQVLKGSSEVDV 240
                           DK G+  GE ENGQTE     +E  PE KEGEKQ LK SS++DV
Sbjct: 181 QKGIEKVDADPEISSKDKMGSDAGETENGQTEAKAATEENVPEVKEGEKQDLKESSDLDV 240

Query: 241 NSEFVGKDETDKNGGETDGRGYIQE-------AEKQGNDVAETVSPNEHTVATEVNQSEK 300
           N   VG DET KNGG+T+G+  IQE        EKQGN+VAE V+P E TVA+EVNQ EK
Sbjct: 241 NLGTVGNDETYKNGGKTNGQDTIQEKTEGLEEVEKQGNEVAEIVTPTEETVASEVNQIEK 300

Query: 301 -----ETDQENNNPDKDDN-----DDNDPGNVVVLQAKGVVEEEKQNDLNE--AAAPEDN 327
                E +Q N++PDK +N      +NDPG VV+ QA GVVEEEKQ+D NE  AAAP D 
Sbjct: 301 AVAQTEIEQVNDSPDKKENYSLDKKENDPGTVVIQQANGVVEEEKQSDQNETVAAAP-DA 360

[Close]

BLAST of Cp4.1LG02g14780 vs. ExPASy TrEMBL
Match: A0A0A0KVG4 (MBD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G005520 PE=4 SV=1)

HSP 1 Score: 334 bits (857), Expect = 4.06e-110
Identity = 218/382 (57.07%), Postives = 252/382 (65.97%), Query Frame = 0


Query: 1   MENKEEAMLIMEDEAQTKSREGVAAMDEVISVELPAPPAWKKLFIPKRAGTPRKSEIVFI 60
           ME+KE  M++  +EAQ       A MDEVISVELPAPP WKKLFIP+R+GTPRK+EIVFI
Sbjct: 1   MESKEGVMMVEIEEAQADIG---AVMDEVISVELPAPPTWKKLFIPRRSGTPRKTEIVFI 60

Query: 61  APTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVKETPPKEEPAKKR 120
           APTGEEIGNRKLLEQYLK HPG PAISEFDWSTGE PRRS RISEKVK TPPKEEP KKR
Sbjct: 61  APTGEEIGNRKLLEQYLKSHPGGPAISEFDWSTGETPRRSARISEKVKATPPKEEPPKKR 120

Query: 121 SRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGN--------------------------- 180
           SRKSS SK++ KEEA+A    PEEVEMKDAE N                           
Sbjct: 121 SRKSSVSKRESKEEANASVTGPEEVEMKDAEANENNIPVVEDKDGSDNPKGEPKEIEKVG 180

Query: 181 --------DKAGAYVGEAENGQTEHQEMA---PEAKEGEKQVLKGSSEVDVNSEFVGKDE 240
                   DK G   GE++NG TE  E     P+ KEGEKQ  +G S+V VNSEFV   E
Sbjct: 181 ADPDISGKDKTGNDAGESKNGHTESLEATENIPQVKEGEKQDHEGGSDVVVNSEFVSMGE 240

Query: 241 TDKNGGETDGRGYIQE-------AEKQGNDVAETVSPNEH--TVATEVNQSEKE-----T 300
           T+K+G ET+G+  IQE       AEKQ N++AETV+P+EH   +A+EVNQSEKE     T
Sbjct: 241 TNKHGSETNGQDAIQEKTEGLEEAEKQENEIAETVTPSEHITAIASEVNQSEKEMVQTET 300

Query: 301 DQENNNPDKDDNDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCNHDVSTNGA- 327
            QEN++    +N  ND  NV + Q+ GVVE EKQND NEA    DNE K N D+STN A 
Sbjct: 301 KQENDSQSNKENK-NDHDNVGIEQSNGVVEGEKQNDQNEATGVSDNEVKGNQDISTNAAK 360

[Close]

BLAST of Cp4.1LG02g14780 vs. ExPASy TrEMBL
Match: A0A1S3BY89 (methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo OX=3656 GN=LOC103494699 PE=4 SV=1)

HSP 1 Score: 328 bits (841), Expect = 1.18e-107
Identity = 219/390 (56.15%), Postives = 250/390 (64.10%), Query Frame = 0


Query: 1   MENKEEAMLIMEDEAQTKSREGVAAMDEVISVELPAPPAWKKLFIPKRAGTPRKSEIVFI 60
           ME+KEE M++  +EAQ  +    AAMDEVISVELPAPP WKKLFIP+R+GTPRK+EIVFI
Sbjct: 1   MESKEEVMMVEIEEAQADTG---AAMDEVISVELPAPPTWKKLFIPRRSGTPRKTEIVFI 60

Query: 61  APTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVKETPPKEEPAKKR 120
           APTGEEIGNRKLLEQYLK HPG PAISEFDWSTGE PRRS RISEKVK TPPKEEP KKR
Sbjct: 61  APTGEEIGNRKLLEQYLKSHPGGPAISEFDWSTGETPRRSARISEKVKATPPKEEPPKKR 120

Query: 121 SRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGN--------------------------- 180
            RKSSGSK++ KEE +A    PEEVEMKDAE N                           
Sbjct: 121 GRKSSGSKRESKEEVNAGVTGPEEVEMKDAEANEKNIPVVEDKDGSDNYQAEDGDNPRGE 180

Query: 181 ----------------DKAGAYVGEAENGQTEHQEMA---PEAKEGEKQVLKGSSEVDVN 240
                           DK G   GE++NG TE  E     P+ KEGEKQ  +G S+V VN
Sbjct: 181 PKEIEKVDADPDISGKDKTGNDAGESKNGHTEAPEATENVPQVKEGEKQDHEGGSDVVVN 240

Query: 241 SEFVGKDETDKNGGETDGRGYIQE-------AEKQGNDVAETVSPNEH--TVATEVNQSE 300
           SEFV   ET+K+G ET+G+  IQE       AEKQGN++AE     EH   +A+EVNQSE
Sbjct: 241 SEFVSMGETNKHGSETNGQDAIQEKTEGLEEAEKQGNEIAE-----EHITAIASEVNQSE 300

Query: 301 KE-----TDQENNNPDKDDNDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCNH 327
           KE     T QEN++    +N  ND  NV + Q  GVVE +KQND NEA A  DNE K N 
Sbjct: 301 KEMVQTETKQENDSQSNKENK-NDHDNVGIEQVNGVVEGKKQNDENEATAVPDNEVKGNQ 360

[Close]

BLAST of Cp4.1LG02g14780 vs. TAIR 10
Match: AT3G15790.1 (methyl-CPG-binding domain 11 )

HSP 1 Score: 142.5 bits (358), Expect = 6.0e-34
Identity = 107/251 (42.63%), Postives = 143/251 (56.97%), Query Frame = 0


Query: 27  DEVISVELPAPPAWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAI 86
           +EV+SVELPAP +WKKLF P + G+ +K+E+VF+APTGEEI NRK LEQYLK HPG+PAI
Sbjct: 5   EEVVSVELPAPSSWKKLFYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNPAI 64

Query: 87  SEFDWSTGEAPRRSVRISEKVKETP-PKEEPAKKRSR-KSSGSKKDMKEEADAVPKVPEE 146
           +EFDW+T   PRRS RISEK K TP P +EP KKR R KS  SKKD + E  +     E 
Sbjct: 65  AEFDWTTSGTPRRSARISEKTKATPSPDKEPPKKRGRTKSPVSKKDAEGE-KSEGGGEEN 124

Query: 147 VEMKDAEGNDKAGAYVGEAEN-------GQTEH-------------QEMAPEAKEGEKQV 206
             +KD E N   G  + E EN       G+TE                 AP  +EGE   
Sbjct: 125 SHVKDTEMNPPEG--IAENENVTDKNGSGETERVNDAKENIVAEETPNAAPVQEEGESMK 184

Query: 207 LKGSSEVDVNSEFVGKDE----TDKNGGETDGRGYIQEAEKQGNDVAETVSPNEHTVATE 252
            K    VD  S+   K++     +KN  + + +  ++ ++++ N  AET +  E+ + TE
Sbjct: 185 EKALDSVDDKSKETDKEKDTGSIEKNSVDVE-KKTVEASDEKKNSEAETRNHEENGLTTE 244

[Close]

BLAST of Cp4.1LG02g14780 vs. TAIR 10
Match: AT1G15340.1 (methyl-CPG-binding domain 10 )

HSP 1 Score: 141.7 bits (356), Expect = 1.0e-33
Identity = 129/345 (37.39%), Postives = 176/345 (51.01%), Query Frame = 0


Query: 27  DEVISVELPAPPAWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAI 86
           DE++S+ELPAP +WKKLF PKRAGTPRK+EIVF+APTGEEI +RK LEQYLK HPG+P I
Sbjct: 5   DELVSIELPAPASWKKLFYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKAHPGNPVI 64

Query: 87  SEFDWSTGEAPRRSVRISEKVKET--PPKEEPAKKRSRKSSGSKKDMKE----------- 146
           SEF+W+TGE PRRS RIS+KVK T   P +EP  K+ R+SS +KKD KE           
Sbjct: 65  SEFEWTTGETPRRSSRISQKVKATTPTPDKEPLLKK-RRSSLTKKDNKEAAEKNEEAAVK 124

Query: 147 --------------------EADAVPKVPE------EVEMKDAEGNDKAGAYVGEAENGQ 206
                               E + V ++ E      E E  +AE  +K G      + GQ
Sbjct: 125 ENMDVDKDGKTENAEAEKEKEKEGVTEIAEAEKENNEGEKTEAEKVNKEGEKTEAGKEGQ 184

Query: 207 TEHQEMAPEAKEGEKQVLKGSSEVDV-----NSEFVGKDETDKNGGETDGRGYIQEAEKQ 266
           TE  E A + KEGEK   + + E +V      S  V   E +K  G  +G     E   +
Sbjct: 185 TEIAE-AEKEKEGEKAEAE-NKEAEVVRDKKESMEVDTSELEKKAGSGEG----AEEPSK 244

Query: 267 GNDVAETVSPNEHTVATEVNQSEKETDQENNNPDKDDNDDNDPGNVVV----LQA----- 319
              + +T       V TE +  +K  +++  N      + N   NV +    L A     
Sbjct: 245 VEGLKDTEMKEAQEVVTEADVEKKPAEEKTENKGSVTTEANGEQNVTLGEPNLDADAEAD 304

[Close]

BLAST of Cp4.1LG02g14780 vs. TAIR 10
Match: AT1G15340.2 (methyl-CPG-binding domain 10 )

HSP 1 Score: 90.9 bits (224), Expect = 2.1e-18
Identity = 100/312 (32.05%), Postives = 149/312 (47.76%), Query Frame = 0


Query: 27  DEVISVELPAPPAWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAI 86
           DE++S+ELPAP +WKKLF PKRAGTPRK+EIVF+APTGEEI +RK LEQYLK        
Sbjct: 5   DELVSIELPAPASWKKLFYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLK-------- 64

Query: 87  SEFDWSTGEAPRRSVRISEKVKETPPKEEPAKKRSRKSSGSKKDMKEEADAVPKVPE--- 146
                        +   +EK +E   KE     +  K+  ++ + ++E + V ++ E   
Sbjct: 65  ------------DNKEAAEKNEEAAVKENMDVDKDGKTENAEAEKEKEKEGVTEIAEAEK 124

Query: 147 ---EVEMKDAEGNDKAGAYVGEAENGQTEHQEMAPEAKEGEKQVLKGSSEVDV-----NS 206
              E E  +AE  +K G      + GQTE  E A + KEGEK   + + E +V      S
Sbjct: 125 ENNEGEKTEAEKVNKEGEKTEAGKEGQTEIAE-AEKEKEGEKAEAE-NKEAEVVRDKKES 184

Query: 207 EFVGKDETDKNGGETDGRGYIQEAEKQGNDVAETVSPNEHTVATEVNQSEKETDQENNNP 266
             V   E +K  G  +G     E   +   + +T       V TE +  +K  +++  N 
Sbjct: 185 MEVDTSELEKKAGSGEG----AEEPSKVEGLKDTEMKEAQEVVTEADVEKKPAEEKTENK 244

Query: 267 DKDDNDDNDPGNVVV----LQA-----KGVVEEEKQNDLNEAAAPEDNEAKCNHDVSTNG 319
                + N   NV +    L A     KG   +E      EA A ++N+ + + +  T  
Sbjct: 245 GSVTTEANGEQNVTLGEPNLDADAEADKGKESKEYDEKTTEAEANKENDTQESDEKKTEA 290

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g14780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LW00	8.4e-33	42.63	Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9XI36	1.4e-32	37.39	Methyl-CpG-binding domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cp4.1LG02g14780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023525889.1	1.41e-221	100.00	methyl-CpG-binding domain-containing protein 11-like [Cucurbita pepo subsp. pepo...	[more]
XP_022998317.1	3.78e-207	94.50	methyl-CpG-binding domain-containing protein 11-like [Cucurbita maxima]	[more]
XP_022948683.1	4.38e-207	93.96	methyl-CpG-binding domain-containing protein 11-like [Cucurbita moschata]	[more]
KAG7036510.1	2.82e-203	93.05	Methyl-CpG-binding domain-containing protein 10 [Cucurbita argyrosperma subsp. a...	[more]
KAG6606799.1	1.15e-202	92.75	Methyl-CpG-binding domain-containing protein 10, partial [Cucurbita argyrosperma...	[more]

BLAST of Cp4.1LG02g14780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K7L8	1.83e-207	94.50	methyl-CpG-binding domain-containing protein 11-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1GA01	2.12e-207	93.96	methyl-CpG-binding domain-containing protein 11-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1DJM3	4.00e-123	58.31	methyl-CpG-binding domain-containing protein 10-like isoform X1 OS=Momordica cha...	[more]
A0A0A0KVG4	4.06e-110	57.07	MBD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G005520 PE=4 SV...	[more]
A0A1S3BY89	1.18e-107	56.15	methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo OX=3656 GN=...	[more]

BLAST of Cp4.1LG02g14780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15790.1	6.0e-34	42.63	methyl-CPG-binding domain 11	[more]
AT1G15340.1	1.0e-33	37.39	methyl-CPG-binding domain 10	[more]
AT1G15340.2	2.1e-18	32.05	methyl-CPG-binding domain 10	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1..21
None	No IPR available	GENE3D	3.30.890.10		coord: 2..135 e-value: 5.6E-10 score: 41.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..327
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 306..327
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 240..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 277..299
None	No IPR available	PANTHER	PTHR33729:SF6	METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 11-LIKE	coord: 24..315
IPR001739	Methyl-CpG DNA binding	PFAM	PF01429	MBD	coord: 32..96 e-value: 2.1E-9 score: 37.0
IPR001739	Methyl-CpG DNA binding	PROSITE	PS50982	MBD	coord: 26..96 score: 11.806526
IPR039622	Methyl-CpG-binding domain-containing protein 10/11	PANTHER	PTHR33729	METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED	coord: 24..315
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 18..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g14780.1	Cp4.1LG02g14780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding