Cp4.1LG02g14110 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g14110
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RHOMBOID-like protein 9
Location	Cp4.1LG02: 12113313 .. 12117492 (+)
RNA-Seq Expression	Cp4.1LG02g14110
Synteny	Cp4.1LG02g14110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGCTCTCGTAATTCCCGCCGCTCGTCCCATACCAAACTTAAAAAACTCGATCAATCCAATTACCTTGCCAATTCTCGAGCGCCGTAATCATTGGCGGGAGATTTCAAATAACAATACGTCTGTTGCTATGGTTTGGACACGAACAACAAAACCAAGAAGAGGGTCGTTGACGGCATCGTTGCAAGATGACAAGCGTGGGAGATCCAATGGTTTGGATTCCGAGTCCGAGGTTTTCGAACAGCTATGTCGTGTTCGGGAGTGTGACACGAATAAGAAACAGTTGAGGTCGTTGGGTTCTTATTTTGGAAGGCTTCAAGGTGGTGGGAGTAAGAGAAAAATGGTTCCTTTGAAGAAGAAGGTAGAGGTGGTTGATACGGGTCAGTTCAAAGCTAAGAAAGAGCTCGAGTTGCTTGACGCTTATTTTGAAAAAGTTGATAATGGTAATTATTTTTTAATTTTATATTAATTTAATGGAGTAAATATTTTTTGAATATGCAATCTATAATTTACAGATGCATGCATGCTTAACCATGCGACGTATAATTTTGGAGGACAACATAAAAGAAAATCGGTCGTATTCACGTCGTTTCCTCTTGAAGATCACGAAAGAGACGACGAGACACAAATGCGACATGACAAACTCGATGATATGATTAAGAGAAGCATGTCAAGAACAACTCAACTACAAGAAGATGAAGTTTCTGATCTCTACTTAATGTACGATTCACATCCTAACTCGTAAAATCGCTTTTGTTATGATCGAATATGGTGGCTAACGGAACCGTGTTCGGTTTGTTTTCGGGATGCAGAAGTGCTCTGGTTTCAGTAAACATAGGTGTTTTCTTGTTTGAAGTAGCGAGTCCAGTAAAAAGCTCAGGGCTGCCACTCTTTTCACTCCCTTCTCTATATGGAGCAAAGATAAATGAGTTGATCCTAGTAGGAGAATGGTGGAGGCTTGTGACACCTATGTTTCTGGTACACGATTGATAGATATAACTCGGTTCGTGTTTCCGTTCTAGAGCTGTTTTGAACATTTATTCGTTTTTCCTTTTTAATAAGACTGAGAACAAAACGTGTGTAACAGCCCAAACTCACCACTAGTCGAGGTTGTCCTCATTGGGCTTTCCCTTTTGAGTTTCCCTCAAGGTTTTAAAATGCGTATGTTAAGGAGAAGTTTTCACACAGTTATAAGGAATACTTTGTTCCCCTCTCCAACTGATGTGGGATCTCACAATTCACCCCTTTGGGAGCCCAGCGTATTCGTTGGCACACCGCCCGATGTTTGTCTCTGATACTATTTATAACCGACCAAACCCATCTCTAGCAGATATTGTCCTCGTTGGGCCTTCCCTTTTGAGTTTTCCGTCAACGTTTTAAAATGCGTCTGTTAAGGAGAAGTTTCCACACCCTTGTTAGGAATGCTTTGTTCCCTCTCTCAATCATGTGGGATCTCACAACCTTGGGGCCCAGCATCCTCGTTGGCACATCGTCCGATGTTTGACTCTGATACTATTTGCAACCGACCAAACCCATCCTTAACCGATATTGTCCTCTTTGGACTTTCCCTTACAGTTTTAAAATGCATCTGCTAGGAGAAGTTCACACACCCTTAAATGCTTTGTTTCCCTCTCCATATATGGGATCTCACAATCCATCCCCCTTTGGGGCCAGCGTCCTCGATGACACACAGCTCGATGTCTAACTCTGGTACCATTTGTAACAGCATAAGCCCATCGCTAACAGATATTGTCATTTTTGGGCTTTTCCTTCCGAGTTTTGCAGGAATGCTTTGTTCTTCTCTTCAACCGATACGGGATCTCACATAGTGTCTACTTAAACGTAGTTCAACTAATCAAGTTATTAACAGTATATCTTACACGAAGTCGGGTGGGAGATTCGTATATCTCGTGACCCACTTTCTTTGACATTGAAGATTTGAATGTAAAGATTTGTTGATTATTACGTTGCTTTAGCTCTCATGAAGCTGATCTCTTTATGCAGCATTCAGGAGCTGTTCATGTTGCTCTCAGTTGTTGGACATTGGTTACATTTGGCCGTCAAGTTTGTATAGACTATGGCCCCTTTACATTTTTCTTGATCTATGTCTTAGGAGGAATTTCTGGCAATCTCACAAGCTTTCTCCATACTCCCGAGCCGACTATCGGTGGAACGGTAACGAAAAAAACAACGTTTTCCCTTCTCGTTTCCAATTACAGTCGATAAATTTACTTCCATTACCGCATATATTAATATCATACTCGAGACGTGCATAAACTAGTTCAAATACCTACGAGTAGTAGTCGAAGGCATAGTTCGAGTTTGATTGCTGTTGGTTAGTCTGATTGGTGATAGATGTAAATTATGAACACATGGAGCAGGGGCCTGTGTTTGCCATGATTGGAGCTTGGCTGAGTTACCAATTCCAAAGCAAAGATGTGGTTGCAAAGGATGTTTCAGACAGCATGTTCTTGAAGGCAATATTTGTAGCTGTCGTCAGTTCCATTTTGAGCAATATTGGGCCAATTGATGAATGGTGAGTAAAAAAACCTCTGGTTTCAAACCCTTAGAAACTCGAGACGAGTCTTAAAAATATGATCCTGTAAGTAACACTAACTTTTGTGTCGATAGTTAAACGATATATAATAGCTAGATCAATTTTTCAACCATTCTAAACGTCATTTGTAACATTCTCGAGAGAATTGTTAATGAATATCTTGACCGTTTTAGTTACGAATTGTTTTGGTTTGTTTGATGTTTGTAGGACTCACACAGGAGCAGCTTTCAGTGGAATGCTATATGGGATTTTAACATGCCCAGTTGTGGAGGTGAATGATGCTGGTTCTTCTTCATCTTCTGCATCATCTTCTTCAAGGAGAGGCCAAGAAAAGGGAATCAAACTTGTTAGGAAGTATGCTGATCCTCGCAAATCATTGGCTTTTTTTGCTCTGTTTATCATGGGATTCACAAGTTTGCTCTTCTTTATTCAGCCTCCTGCCACCACATTGCCCTTATAAGGCTTTTGATTGGCTTTGAGAGGAAATTTCTTCCCAAAATGTTGCCAAAATATCAAGTTTATAGTATAGTTTGCCTCTTGTTAAGCTTAGCTTACAATTTTGTCTTTCAATTGCTACAAGAACTCTCAAAATCCCAGTTTAAATCATATTATGATACTCGAAATGAATTAGAACGAACTCTCTTTGTATGTAGAAAATGAAGAACAGCAGATCAATGTGTTTAGACCAAACGAGAAAACGAAGATCATATTCCATAGCACTCGAAACATCGAAACACCGAAACATCAAATTCTTCTCATAAATAATAAAACCACATTATACTCTTTGTTGGAGTATTCAAAGGAAGGCTCTAGAAGTGCTTCCACATCTTGCACTCAAAAGCCAAAGCCCATCAACCAAAGACATCATTTCATTCAGGAACTACCAACAACAACCCAAGTAGCACTAACAACACTAAAAGACAGGGTCGCCACATTTTAAAGAAGAAAAGAAAAGAAAAAAAGGAAAAGTAAAAGTACAGAGTACAGCTCCTATTGACTCGAACAACCAGACAAACTACTGTCCATGTCCCTCTCCTGATTCACGTTTTGATGCTTCCTTAATTTCATCGCCGGCTTCATCCTACAAAATTTGTCACAAATCACCATCATTAGTATGCAATATCAGACCAGACACAACAGGTTACAGAACATGTCAGGACATGTCTACCGACTTTATTGTCATTAATGGCAATTGCACAAAGCCAGCTCATGTGTAGCACATTGCTATAATTTTAAAATTCGGGAGTTTTTTGGTTTGTGACTCAATGGATCTGTTTTTCTCTACCTTGGATCTAGGAGACTATTTACAGGAGAAGCAGACAAGAAAAAACAGACAAGATTTTAGACAGCAGTCTAATCAAGGTTTTCCAACGCGGTTGTGCAGAGATATGATTGGAAGCAGTAAAACAGAGCTGGAATAAGGGTATAGCAAGACTTGTCTTGAAAACAAAATTGAGTAGCCAATGCATCAAGGCTTGTGCCTGAGAGCGTTACTTACCCCAACATCAGAGGTCCAAAGGGTCAAGTTGTCTCGGAGAAGTTGCATGATTAAGGTGCTATCCTTGTATGATTCTTCACCCAATGTGTCAAGCTCAGAAATCGCTTCGTCAAAAGCCTATTT

mRNA sequence

ATGATGGCTCTCGTAATTCCCGCCGCTCGTCCCATACCAAACTTAAAAAACTCGATCAATCCAATTACCTTGCCAATTCTCGAGCGCCGTAATCATTGGCGGGAGATTTCAAATAACAATACGTCTGTTGCTATGGTTTGGACACGAACAACAAAACCAAGAAGAGGGTCGTTGACGGCATCGTTGCAAGATGACAAGCGTGGGAGATCCAATGGTTTGGATTCCGAGTCCGAGGTTTTCGAACAGCTATGTCGTGTTCGGGAGTGTGACACGAATAAGAAACAGTTGAGGTCGTTGGGTTCTTATTTTGGAAGGCTTCAAGGTGGTGGGAGTAAGAGAAAAATGGTTCCTTTGAAGAAGAAGGTAGAGGTGGTTGATACGGGTCAGTTCAAAGCTAAGAAAGAGCTCGAGTTGCTTGACGCTTATTTTGAAAAAGTTGATAATGATGCATGCATGCTTAACCATGCGACGTATAATTTTGGAGGACAACATAAAAGAAAATCGGTCGTATTCACGTCGTTTCCTCTTGAAGATCACGAAAGAGACGACGAGACACAAATGCGACATGACAAACTCGATGATATGATTAAGAGAAGCATGTCAAGAACAACTCAACTACAAGAAGATGAAGTTTCTGATCTCTACTTAATAAGTGCTCTGGTTTCAGTAAACATAGGTGTTTTCTTGTTTGAAGTAGCGAGTCCAGTAAAAAGCTCAGGGCTGCCACTCTTTTCACTCCCTTCTCTATATGGAGCAAAGATAAATGAGTTGATCCTAGTAGGAGAATGGTGGAGGCTTGTGACACCTATGTTTCTGCATTCAGGAGCTGTTCATGTTGCTCTCAGTTGTTGGACATTGGTTACATTTGGCCGTCAAGTTTGTATAGACTATGGCCCCTTTACATTTTTCTTGATCTATGTCTTAGGAGGAATTTCTGGCAATCTCACAAGCTTTCTCCATACTCCCGAGCCGACTATCGGTGGAACGGGGCCTGTGTTTGCCATGATTGGAGCTTGGCTGAGTTACCAATTCCAAAGCAAAGATGTGGTTGCAAAGGATGTTTCAGACAGCATGTTCTTGAAGGCAATATTTGTAGCTGTCGTCAGTTCCATTTTGAGCAATATTGGGCCAATTGATGAATGGACTCACACAGGAGCAGCTTTCAGTGGAATGCTATATGGGATTTTAACATGCCCAGTTGTGGAGGTGAATGATGCTGGTTCTTCTTCATCTTCTGCATCATCTTCTTCAAGGAGAGGCCAAGAAAAGGGAATCAAACTTGTTAGGAAGTATGCTGATCCTCGCAAATCATTGGCTTTTTTTGCTCTGTTTATCATGGGATTCACAAGTTTGCTCTTCTTTATTCAGCCTCCTGCCACCACATTGCCCTTATAAGGCTTTTGATTGGCTTTGAGAGGAAATTTCTTCCCAAAATGTTGCCAAAATATCAAGTTTATAGTATAGTTTGCCTCTTGTTAAGCTTAGCTTACAATTTTGTCTTTCAATTGCTACAAGAACTCTCAAAATCCCAGTTTAAATCATATTATGATACTCGAAATGAATTAGAACGAACTCTCTTTGTATGTAGAAAATGAAGAACAGCAGATCAATGTGTTTAGACCAAACGAGAAAACGAAGATCATATTCCATAGCACTCGAAACATCGAAACACCGAAACATCAAATTCTTCTCATAAATAATAAAACCACATTATACTCTTTGTTGGAGTATTCAAAGGAAGGCTCTAGAAGTGCTTCCACATCTTGCACTCAAAAGCCAAAGCCCATCAACCAAAGACATCATTTCATTCAGGAACTACCAACAACAACCCAAGTAGCACTAACAACACTAAAAGACAGGGTCGCCACATTTTAAAGAAGAAAAGAAAAGAAAAAAAGGAAAAGTAAAAGTACAGAGTACAGCTCCTATTGACTCGAACAACCAGACAAACTACTGTCCATGTCCCTCTCCTGATTCACGTTTTGATGCTTCCTTAATTTCATCGCCGGCTTCATCCTACAAAATTTGTCACAAATCACCATCATTAGTATGCAATATCAGACCAGACACAACAGGTTACAGAACATGTCAGGACATGTCTACCGACTTTATTGTCATTAATGGCAATTGCACAAAGCCAGCTCATGTGTAGCACATTGCTATAATTTTAAAATTCGGGAGTTTTTTGGTTTGTGACTCAATGGATCTGTTTTTCTCTACCTTGGATCTAGGAGACTATTTACAGGAGAAGCAGACAAGAAAAAACAGACAAGATTTTAGACAGCAGTCTAATCAAGGTTTTCCAACGCGGTTGTGCAGAGATATGATTGGAAGCAGTAAAACAGAGCTGGAATAAGGGTATAGCAAGACTTGTCTTGAAAACAAAATTGAGTAGCCAATGCATCAAGGCTTGTGCCTGAGAGCGTTACTTACCCCAACATCAGAGGTCCAAAGGGTCAAGTTGTCTCGGAGAAGTTGCATGATTAAGGTGCTATCCTTGTATGATTCTTCACCCAATGTGTCAAGCTCAGAAATCGCTTCGTCAAAAGCCTATTT

Coding sequence (CDS)

ATGATGGCTCTCGTAATTCCCGCCGCTCGTCCCATACCAAACTTAAAAAACTCGATCAATCCAATTACCTTGCCAATTCTCGAGCGCCGTAATCATTGGCGGGAGATTTCAAATAACAATACGTCTGTTGCTATGGTTTGGACACGAACAACAAAACCAAGAAGAGGGTCGTTGACGGCATCGTTGCAAGATGACAAGCGTGGGAGATCCAATGGTTTGGATTCCGAGTCCGAGGTTTTCGAACAGCTATGTCGTGTTCGGGAGTGTGACACGAATAAGAAACAGTTGAGGTCGTTGGGTTCTTATTTTGGAAGGCTTCAAGGTGGTGGGAGTAAGAGAAAAATGGTTCCTTTGAAGAAGAAGGTAGAGGTGGTTGATACGGGTCAGTTCAAAGCTAAGAAAGAGCTCGAGTTGCTTGACGCTTATTTTGAAAAAGTTGATAATGATGCATGCATGCTTAACCATGCGACGTATAATTTTGGAGGACAACATAAAAGAAAATCGGTCGTATTCACGTCGTTTCCTCTTGAAGATCACGAAAGAGACGACGAGACACAAATGCGACATGACAAACTCGATGATATGATTAAGAGAAGCATGTCAAGAACAACTCAACTACAAGAAGATGAAGTTTCTGATCTCTACTTAATAAGTGCTCTGGTTTCAGTAAACATAGGTGTTTTCTTGTTTGAAGTAGCGAGTCCAGTAAAAAGCTCAGGGCTGCCACTCTTTTCACTCCCTTCTCTATATGGAGCAAAGATAAATGAGTTGATCCTAGTAGGAGAATGGTGGAGGCTTGTGACACCTATGTTTCTGCATTCAGGAGCTGTTCATGTTGCTCTCAGTTGTTGGACATTGGTTACATTTGGCCGTCAAGTTTGTATAGACTATGGCCCCTTTACATTTTTCTTGATCTATGTCTTAGGAGGAATTTCTGGCAATCTCACAAGCTTTCTCCATACTCCCGAGCCGACTATCGGTGGAACGGGGCCTGTGTTTGCCATGATTGGAGCTTGGCTGAGTTACCAATTCCAAAGCAAAGATGTGGTTGCAAAGGATGTTTCAGACAGCATGTTCTTGAAGGCAATATTTGTAGCTGTCGTCAGTTCCATTTTGAGCAATATTGGGCCAATTGATGAATGGACTCACACAGGAGCAGCTTTCAGTGGAATGCTATATGGGATTTTAACATGCCCAGTTGTGGAGGTGAATGATGCTGGTTCTTCTTCATCTTCTGCATCATCTTCTTCAAGGAGAGGCCAAGAAAAGGGAATCAAACTTGTTAGGAAGTATGCTGATCCTCGCAAATCATTGGCTTTTTTTGCTCTGTTTATCATGGGATTCACAAGTTTGCTCTTCTTTATTCAGCCTCCTGCCACCACATTGCCCTTATAA

Protein sequence

MMALVIPAARPIPNLKNSINPITLPILERRNHWREISNNNTSVAMVWTRTTKPRRGSLTASLQDDKRGRSNGLDSESEVFEQLCRVRECDTNKKQLRSLGSYFGRLQGGGSKRKMVPLKKKVEVVDTGQFKAKKELELLDAYFEKVDNDACMLNHATYNFGGQHKRKSVVFTSFPLEDHERDDETQMRHDKLDDMIKRSMSRTTQLQEDEVSDLYLISALVSVNIGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCWTLVTFGRQVCIDYGPFTFFLIYVLGGISGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQFQSKDVVAKDVSDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGILTCPVVEVNDAGSSSSSASSSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFFIQPPATTLPL

Homology

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BLAST of Cp4.1LG02g14110 vs. ExPASy Swiss-Prot
Match: Q9FFX0 (RHOMBOID-like protein 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL9 PE=2 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 7.6e-72
Identity = 156/378 (41.27%), Postives = 221/378 (58.47%), Query Frame = 0


Query: 82  QLCRVRECDTN---KKQLRSLGSYFGRLQGGGSKRKMVPLKKKVEVVDTGQFKAKKELEL 141
           +LC VR    N   K++L+ L SYFG+LQ    K     +    ++    +    +EL+ 
Sbjct: 63  RLCLVRASSENKITKQRLKLLDSYFGKLQNDDEKPS---ISTGDDIDRKAELNVNEELDS 122

Query: 142 LDAYFEKVDNDACMLNHATYNFGGQHKRKSVVFTSFPLEDHERDD-ETQMRHDKLDDMIK 201
           L AY +K+  DA              K K +V ++  +   E     +++R   +++   
Sbjct: 123 LSAYLDKLQKDA--------------KSKGLVSSTLDVVKSEGGSVASKLRKTGIENNNS 182

Query: 202 RSMSRTTQLQEDEVSDLYLISALVSVNIGVFLFEVASPVKSSGLPLFSLPSLYGAKINEL 261
                  + Q ++  + Y +S L S+N+GV LFE A+PV+++ + L SLP LYGAKIN+L
Sbjct: 183 PFQQFDDEDQAEDTLNFYAVSILASINVGVCLFEAAAPVRNNNMGLLSLPLLYGAKINDL 242

Query: 262 ILVGEWWRLVTPMFLHSGAVHVALSCWTLVTFGRQVCIDYGPFTFFLIYVLGGISGNLTS 321
           IL GEWWRLVTPMFLHSG  HVALS W L+TFG +VC DYG FTF LIY+LGG+SGN  S
Sbjct: 243 ILAGEWWRLVTPMFLHSGIPHVALSSWALLTFGPKVCRDYGLFTFCLIYILGGVSGNFMS 302

Query: 322 FLHTPEPTIGGTGPVFAMIGAWLSYQFQSKDVVAKDVSDSMFLKAIFVAVVSSILSNIGP 381
           FLHT +PT+GGTGP FA+IGAWL  Q Q+K+++  +  + +F KAI +     ILS+ GP
Sbjct: 303 FLHTADPTVGGTGPAFALIGAWLVDQNQNKEMIKSNEYEDLFQKAIIMTGFGLILSHFGP 362

Query: 382 IDEWTHTGAAFSGMLYGILTCPVVEVNDAGSSSSSASSSSRRGQEKGIKLVRKYADPRKS 441
           ID+WT+ GA  +G++YG  TCPV+++   GS       +   G EK     +  ADP KS
Sbjct: 363 IDDWTNLGALIAGIVYGFFTCPVLQLGSGGSERQEGIVTV--GPEK-----QNSADPCKS 416

Query: 442 LAFFALFIMGFTSLLFFI 456
              F +F+    + L  I
Sbjct: 423 FLLFTIFVAVIVTSLLLI 416

[Close]

BLAST of Cp4.1LG02g14110 vs. ExPASy Swiss-Prot
Match: P54493 (Rhomboid protease GluP OS=Bacillus subtilis (strain 168) OX=224308 GN=gluP PE=1 SV=2)

HSP 1 Score: 95.1 bits (235), Expect = 2.2e-18
Identity = 75/235 (31.91%), Postives = 110/235 (46.81%), Query Frame = 0


Query: 170 VFTSFPLED----HERDDETQMRHDK-LDDMIKRSMSRTTQ---LQEDEVSDLYLISALV 229
           VF SF  ED    H   +  QM  ++ L  ++K+   R T+    Q  + +  YL  AL 
Sbjct: 128 VFPSFRTEDCSEEHASFENAQMARERFLSLVLKQEEQRKTEAAVFQNGKPTFTYLFIALQ 187

Query: 230 SVNIGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVAL 289
            +    FL E+     + G         +GAK N LI  GEWWRL+TP+ LH G  H+A 
Sbjct: 188 ILMF--FLLEI-----NGGSTNTETLVAFGAKENSLIAQGEWWRLLTPIVLHIGIAHLAF 247

Query: 290 SCWTLVTFGRQVCIDYGPFTFFLIYVLGGISGNLTSFLHTPEPTIGGTGPVFAMIGAWLS 349
           +   L + G  V   YG   F LIY+  GI+G++ SF+ +P P+ G +G +F  +GA L 
Sbjct: 248 NTLALWSVGTAVERMYGSGRFLLIYLAAGITGSIASFVFSPYPSAGASGAIFGCLGALLY 307

Query: 350 YQFQSKDVVAKDVSDSMFLKAIFVAVVSSILSNIG------PIDEWTHTGAAFSG 391
               ++          MFL+ I   ++  I+ N+G       ID   H G    G
Sbjct: 308 VALSNR---------KMFLRTIGTNIIVIIIINLGFGFAVSNIDNSGHIGGLIGG 346

[Close]

BLAST of Cp4.1LG02g14110 vs. ExPASy Swiss-Prot
Match: F4ICF4 (RHOMBOID-like protein 10, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL10 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 5.2e-12
Identity = 46/180 (25.56%), Postives = 86/180 (47.78%), Query Frame = 0


Query: 218 SALVSVNIGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAV 277
           + L+++N+ +++ ++AS  K            +GAKIN LI  G+ WRL T   LH+  +
Sbjct: 131 NVLLAINVIMYIAQIASDGK---------VLTWGAKINSLIERGQLWRLATASVLHANPM 190

Query: 278 HVALSCWTLVTFGRQVCIDYGPFTFFLIYVLGGIS-------GNLTSFLHTPEPTIGGTG 337
           H+ ++C++L + G       GP  F  +Y+   ++       G+  S+     P++G +G
Sbjct: 191 HLMINCYSLNSIGPTAESLGGPKRFLAVYLTSAVAKPILRVLGSAMSYWFNKAPSVGASG 250

Query: 338 PVFAMIGAWLSYQFQSKDVVAKDVSDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSG 391
            +F ++G+   +  + K +V     D M +  I    ++  L +   ID W H G    G
Sbjct: 251 AIFGLVGSVAVFVIRHKQMVRGGNEDLMQIAQIIALNMAMGLMS-RRIDNWGHIGGLLGG 300

[Close]

BLAST of Cp4.1LG02g14110 vs. ExPASy Swiss-Prot
Match: Q9LYP1 (RHOMBOID-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RBL3 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 9.8e-11
Identity = 42/161 (26.09%), Postives = 85/161 (52.80%), Query Frame = 0


Query: 242 PLF-----SLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCWTLVTFGRQVCID 301
           PLF     +L  L   + ++++   E WRL+T ++LH+G +H+  +  +LV  G ++   
Sbjct: 108 PLFGPSSHTLEKLGALEWSKVVEKKEGWRLLTCIWLHAGVIHLGANMLSLVFIGIRLEQQ 167

Query: 302 YGPFTFFLIYVLGGISGNLTSFLHTPEP-TIGGTGPVFAMIGAWLSYQFQSKDVVAKDVS 361
           +G     +IY+L GI G++ S L      ++G +G +F ++G+ LS  F +  + +  + 
Sbjct: 168 FGFVRIGVIYLLSGIGGSVLSSLFIRNSISVGASGALFGLLGSMLSELFTNWTIYSNKI- 227

Query: 362 DSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGIL 397
            +  L  +FV +++  +  +  +D + H G   +G L G +
Sbjct: 228 -AALLTLLFVILINLAIGILPHVDNFAHVGGFVTGFLLGFI 266

[Close]

BLAST of Cp4.1LG02g14110 vs. ExPASy Swiss-Prot
Match: Q695T8 (Rhomboid-like protease 4 OS=Toxoplasma gondii OX=5811 GN=ROM4 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 9.8e-11
Identity = 43/161 (26.71%), Postives = 80/161 (49.69%), Query Frame = 0


Query: 246 LPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCWTLVTFGRQVCIDYGPFTFFLI 305
           L  L G + N +    E +RL T M++H G +H+ ++    +     +  D+G     L+
Sbjct: 325 LRHLGGLETNYIREYSETFRLFTSMYMHGGWLHILINLSCQIQILWIIEPDWGFLRTTLL 384

Query: 306 YVLGGISGNLTSFLHTP-EPTIGGTGPVFAMIGAWLSYQFQSKDVVAKDVSDSMFLKAIF 365
           + LGGISGNL S +  P   T+G +G ++A++GA + Y  +    + +     +F+  + 
Sbjct: 385 FFLGGISGNLLSAVADPCSITVGSSGSMYALLGALIPYCVEYWKSIPRPGCILVFMIVVI 444

Query: 366 VAVVSSILSNIGPIDEWTHTGAAFSGMLYGILTCPVVEVND 406
           + +++ +    G  D + H G A  G+L+G  +   V   D
Sbjct: 445 IGILTGM---AGFTDNYAHMGGALGGILWGFASITTVSACD 482

[Close]

BLAST of Cp4.1LG02g14110 vs. NCBI nr
Match: XP_023525918.1 (RHOMBOID-like protein 9, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 910 bits (2353), Expect = 0.0
Identity = 464/464 (100.00%), Postives = 464/464 (100.00%), Query Frame = 0


Query: 1   MMALVIPAARPIPNLKNSINPITLPILERRNHWREISNNNTSVAMVWTRTTKPRRGSLTA 60
           MMALVIPAARPIPNLKNSINPITLPILERRNHWREISNNNTSVAMVWTRTTKPRRGSLTA
Sbjct: 1   MMALVIPAARPIPNLKNSINPITLPILERRNHWREISNNNTSVAMVWTRTTKPRRGSLTA 60

Query: 61  SLQDDKRGRSNGLDSESEVFEQLCRVRECDTNKKQLRSLGSYFGRLQGGGSKRKMVPLKK 120
           SLQDDKRGRSNGLDSESEVFEQLCRVRECDTNKKQLRSLGSYFGRLQGGGSKRKMVPLKK
Sbjct: 61  SLQDDKRGRSNGLDSESEVFEQLCRVRECDTNKKQLRSLGSYFGRLQGGGSKRKMVPLKK 120

Query: 121 KVEVVDTGQFKAKKELELLDAYFEKVDNDACMLNHATYNFGGQHKRKSVVFTSFPLEDHE 180
           KVEVVDTGQFKAKKELELLDAYFEKVDNDACMLNHATYNFGGQHKRKSVVFTSFPLEDHE
Sbjct: 121 KVEVVDTGQFKAKKELELLDAYFEKVDNDACMLNHATYNFGGQHKRKSVVFTSFPLEDHE 180

Query: 181 RDDETQMRHDKLDDMIKRSMSRTTQLQEDEVSDLYLISALVSVNIGVFLFEVASPVKSSG 240
           RDDETQMRHDKLDDMIKRSMSRTTQLQEDEVSDLYLISALVSVNIGVFLFEVASPVKSSG
Sbjct: 181 RDDETQMRHDKLDDMIKRSMSRTTQLQEDEVSDLYLISALVSVNIGVFLFEVASPVKSSG 240

Query: 241 LPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCWTLVTFGRQVCIDYGPF 300
           LPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCWTLVTFGRQVCIDYGPF
Sbjct: 241 LPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCWTLVTFGRQVCIDYGPF 300

Query: 301 TFFLIYVLGGISGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQFQSKDVVAKDVSDSMFL 360
           TFFLIYVLGGISGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQFQSKDVVAKDVSDSMFL
Sbjct: 301 TFFLIYVLGGISGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQFQSKDVVAKDVSDSMFL 360

Query: 361 KAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGILTCPVVEVNDAGSSSSSASSSSRRG 420
           KAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGILTCPVVEVNDAGSSSSSASSSSRRG
Sbjct: 361 KAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGILTCPVVEVNDAGSSSSSASSSSRRG 420

Query: 421 QEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFFIQPPATTLPL 464
           QEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFFIQPPATTLPL
Sbjct: 421 QEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFFIQPPATTLPL 464

[Close]

BLAST of Cp4.1LG02g14110 vs. NCBI nr
Match: XP_023525919.1 (RHOMBOID-like protein 9, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 858 bits (2216), Expect = 3.75e-313
Identity = 443/464 (95.47%), Postives = 443/464 (95.47%), Query Frame = 0


Query: 1   MMALVIPAARPIPNLKNSINPITLPILERRNHWREISNNNTSVAMVWTRTTKPRRGSLTA 60
           MMALVIPAARPIPNLKNSINPITLPILERRNHWREISNNNTSVAMVWTRTTKPRRGSLTA
Sbjct: 1   MMALVIPAARPIPNLKNSINPITLPILERRNHWREISNNNTSVAMVWTRTTKPRRGSLTA 60

Query: 61  SLQDDKRGRSNGLDSESEVFEQLCRVRECDTNKKQLRSLGSYFGRLQGGGSKRKMVPLKK 120
           SLQDDKRGRSNGLDSESEVFEQLCRVRECDTNKKQLRSLGSYFGRLQGGGSKRKMVPLKK
Sbjct: 61  SLQDDKRGRSNGLDSESEVFEQLCRVRECDTNKKQLRSLGSYFGRLQGGGSKRKMVPLKK 120

Query: 121 KVEVVDTGQFKAKKELELLDAYFEKVDNDACMLNHATYNFGGQHKRKSVVFTSFPLEDHE 180
           KVEVVDT                     DACMLNHATYNFGGQHKRKSVVFTSFPLEDHE
Sbjct: 121 KVEVVDT---------------------DACMLNHATYNFGGQHKRKSVVFTSFPLEDHE 180

Query: 181 RDDETQMRHDKLDDMIKRSMSRTTQLQEDEVSDLYLISALVSVNIGVFLFEVASPVKSSG 240
           RDDETQMRHDKLDDMIKRSMSRTTQLQEDEVSDLYLISALVSVNIGVFLFEVASPVKSSG
Sbjct: 181 RDDETQMRHDKLDDMIKRSMSRTTQLQEDEVSDLYLISALVSVNIGVFLFEVASPVKSSG 240

Query: 241 LPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCWTLVTFGRQVCIDYGPF 300
           LPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCWTLVTFGRQVCIDYGPF
Sbjct: 241 LPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCWTLVTFGRQVCIDYGPF 300

Query: 301 TFFLIYVLGGISGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQFQSKDVVAKDVSDSMFL 360
           TFFLIYVLGGISGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQFQSKDVVAKDVSDSMFL
Sbjct: 301 TFFLIYVLGGISGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQFQSKDVVAKDVSDSMFL 360

Query: 361 KAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGILTCPVVEVNDAGSSSSSASSSSRRG 420
           KAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGILTCPVVEVNDAGSSSSSASSSSRRG
Sbjct: 361 KAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGILTCPVVEVNDAGSSSSSASSSSRRG 420

Query: 421 QEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFFIQPPATTLPL 464
           QEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFFIQPPATTLPL
Sbjct: 421 QEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFFIQPPATTLPL 443

[Close]

BLAST of Cp4.1LG02g14110 vs. NCBI nr
Match: KAG7036783.1 (RHOMBOID-like protein 9, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 848 bits (2191), Expect = 9.11e-309
Identity = 435/470 (92.55%), Postives = 446/470 (94.89%), Query Frame = 0


Query: 1   MMALVIPAARPIPNLKNSINPITLPILERRNHWREISNNNTSVAMVWTRTTKPRRGSLTA 60
           MMAL IPAARPIPNLKNSINPITLPILERRNHWREISNNN+SVAMVWT+TTKPRRGSLTA
Sbjct: 9   MMALAIPAARPIPNLKNSINPITLPILERRNHWREISNNNSSVAMVWTQTTKPRRGSLTA 68

Query: 61  SLQDDKRGRSNGLDSESEVFEQLCRVRECDTNKKQLRSLGSYFGRLQGGGSKRKMVPLKK 120
           SLQDDKRGRSNGLDSESEVFE+LCRVRECDTNKKQLRSLGSYFGRLQGGGSKRKMVPLKK
Sbjct: 69  SLQDDKRGRSNGLDSESEVFEKLCRVRECDTNKKQLRSLGSYFGRLQGGGSKRKMVPLKK 128

Query: 121 KVEVVDTGQFKAKKELELLDAYFEKVDNDACMLNHATYNFGGQHKRKSVVFTSFPLEDHE 180
           KVEVVDTGQF+AKKELELLDAYFEKV NDACM NHATYNFGGQHK KSVVFTSFPLEDHE
Sbjct: 129 KVEVVDTGQFEAKKELELLDAYFEKVYNDACMHNHATYNFGGQHKSKSVVFTSFPLEDHE 188

Query: 181 RDDETQMRHDKLDDMIKRSMSRTTQLQEDEVSDLYLISALVSVNIGVFLFEVASPVKSSG 240
           RDDETQ+RHDKLDDMI RSM RTTQLQEDEVS+LYLIS LVSVNIGVFLFEVASPVKSSG
Sbjct: 189 RDDETQIRHDKLDDMITRSMPRTTQLQEDEVSNLYLISGLVSVNIGVFLFEVASPVKSSG 248

Query: 241 LPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAV------HVALSCWTLVTFGRQVC 300
           LPLFSLPSLYGAKINELI+ GEWWRLVTPMFL           HVALSCWTLVTFGRQVC
Sbjct: 249 LPLFSLPSLYGAKINELIIGGEWWRLVTPMFLLISLCSIQELFHVALSCWTLVTFGRQVC 308

Query: 301 IDYGPFTFFLIYVLGGISGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQFQSKDVVAKDV 360
            DYGPFTFFLIYVLGG+SGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQFQ+KDVVAKDV
Sbjct: 309 RDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQFQNKDVVAKDV 368

Query: 361 SDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGILTCPVVEVNDAGSSSSSAS 420
            D MFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYG LTCPVVEVNDAGSSS SAS
Sbjct: 369 LDDMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGFLTCPVVEVNDAGSSSYSAS 428

Query: 421 SSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFFIQPPATTLPL 464
           +SSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFT+LLFFIQPPATTLPL
Sbjct: 429 TSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTTLLFFIQPPATTLPL 478

[Close]

BLAST of Cp4.1LG02g14110 vs. NCBI nr
Match: XP_022948383.1 (RHOMBOID-like protein 9, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 795 bits (2054), Expect = 7.59e-289
Identity = 403/420 (95.95%), Postives = 410/420 (97.62%), Query Frame = 0


Query: 45  MVWTRTTKPRRGSLTASLQDDKRGRSNGLDSESEVFEQLCRVRECDTNKKQLRSLGSYFG 104
           MVWTRTTKPRRGSLTASLQDDKRGRSNGLDSESEVFE+LCRVRECD NKKQLRSLGSYFG
Sbjct: 1   MVWTRTTKPRRGSLTASLQDDKRGRSNGLDSESEVFEKLCRVRECDANKKQLRSLGSYFG 60

Query: 105 RLQGGGSKRKMVPLKKKVEVVDTGQFKAKKELELLDAYFEKVDNDACMLNHATYNFGGQH 164
           RLQGGGSKRKMVPLKKKVEVVDTGQF+AKKELELLDAYFEKVDNDACM NHATYNFGGQH
Sbjct: 61  RLQGGGSKRKMVPLKKKVEVVDTGQFEAKKELELLDAYFEKVDNDACMHNHATYNFGGQH 120

Query: 165 KRKSVVFTSFPLEDHERDDETQMRHDKLDDMIKRSMSRTTQLQEDEVSDLYLISALVSVN 224
           K KSVVFTSFPLEDHERDDETQ+RHDKLDDMI RSM RTTQLQEDEVSDLYLIS LVSVN
Sbjct: 121 KSKSVVFTSFPLEDHERDDETQIRHDKLDDMITRSMPRTTQLQEDEVSDLYLISGLVSVN 180

Query: 225 IGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCW 284
           IGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCW
Sbjct: 181 IGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCW 240

Query: 285 TLVTFGRQVCIDYGPFTFFLIYVLGGISGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQF 344
           TLVTFGRQVC DYGPFTFFLIYVLGG+SGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQF
Sbjct: 241 TLVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQF 300

Query: 345 QSKDVVAKDVSDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGILTCPVVEVN 404
           Q+KDVVAKDV DSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYG+LTCPVVEVN
Sbjct: 301 QNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGLLTCPVVEVN 360

Query: 405 DAGSSSSSASSSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFFIQPPATTLPL 464
           DAGSSS SAS+SSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLF IQPPATTLPL
Sbjct: 361 DAGSSSYSASTSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFLIQPPATTLPL 420

[Close]

BLAST of Cp4.1LG02g14110 vs. NCBI nr
Match: XP_022998042.1 (RHOMBOID-like protein 9, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 768 bits (1984), Expect = 3.63e-278
Identity = 394/421 (93.59%), Postives = 404/421 (95.96%), Query Frame = 0


Query: 45  MVWTRTTKPRRGSLTASLQ-DDKRGRSNGLDSESEVFEQLCRVRECDTNKKQLRSLGSYF 104
           MV TRT KPRRGSLTASLQ DDKR RSNGLDS+SEVFE+LCRVREC+TN+KQLRSLGSYF
Sbjct: 1   MVLTRTRKPRRGSLTASLQRDDKRARSNGLDSDSEVFEKLCRVRECNTNEKQLRSLGSYF 60

Query: 105 GRLQGGGSKRKMVPLKKKVEVVDTGQFKAKKELELLDAYFEKVDNDACMLNHATYNFGGQ 164
           GRLQGGGSKRKMVPLKKKVEVVDTGQFKAKKELELLDAYFEKVDNDAC+ NHATYNFG Q
Sbjct: 61  GRLQGGGSKRKMVPLKKKVEVVDTGQFKAKKELELLDAYFEKVDNDACIHNHATYNFGEQ 120

Query: 165 HKRKSVVFTSFPLEDHERDDETQMRHDKLDDMIKRSMSRTTQLQEDEVSDLYLISALVSV 224
           HK KS VFTS PL+DHERDDETQ+RHDKLDDMIKRSM RT QLQEDEVSDLYLISALVSV
Sbjct: 121 HKSKSFVFTSLPLDDHERDDETQIRHDKLDDMIKRSMPRTAQLQEDEVSDLYLISALVSV 180

Query: 225 NIGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSC 284
           NI VFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSC
Sbjct: 181 NIAVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSC 240

Query: 285 WTLVTFGRQVCIDYGPFTFFLIYVLGGISGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQ 344
           WTLVTFGRQVC DYGPFTFFLIYVLGG+SGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQ
Sbjct: 241 WTLVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQ 300

Query: 345 FQSKDVVAKDVSDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGILTCPVVEV 404
           FQ+KDVVAKDV DSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYG LTCPVVEV
Sbjct: 301 FQNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGFLTCPVVEV 360

Query: 405 NDAGSSSSSASSSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFFIQPPATTLP 464
           NDAGSSSSSASSSSRRGQE+GIKLVRK ADPRKSLAFFALFIMGFTSL FFIQPPATTLP
Sbjct: 361 NDAGSSSSSASSSSRRGQERGIKLVRKCADPRKSLAFFALFIMGFTSLFFFIQPPATTLP 420

[Close]

BLAST of Cp4.1LG02g14110 vs. ExPASy TrEMBL
Match: A0A6J1G965 (RHOMBOID-like protein 9, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452077 PE=3 SV=1)

HSP 1 Score: 795 bits (2054), Expect = 3.67e-289
Identity = 403/420 (95.95%), Postives = 410/420 (97.62%), Query Frame = 0


Query: 45  MVWTRTTKPRRGSLTASLQDDKRGRSNGLDSESEVFEQLCRVRECDTNKKQLRSLGSYFG 104
           MVWTRTTKPRRGSLTASLQDDKRGRSNGLDSESEVFE+LCRVRECD NKKQLRSLGSYFG
Sbjct: 1   MVWTRTTKPRRGSLTASLQDDKRGRSNGLDSESEVFEKLCRVRECDANKKQLRSLGSYFG 60

Query: 105 RLQGGGSKRKMVPLKKKVEVVDTGQFKAKKELELLDAYFEKVDNDACMLNHATYNFGGQH 164
           RLQGGGSKRKMVPLKKKVEVVDTGQF+AKKELELLDAYFEKVDNDACM NHATYNFGGQH
Sbjct: 61  RLQGGGSKRKMVPLKKKVEVVDTGQFEAKKELELLDAYFEKVDNDACMHNHATYNFGGQH 120

Query: 165 KRKSVVFTSFPLEDHERDDETQMRHDKLDDMIKRSMSRTTQLQEDEVSDLYLISALVSVN 224
           K KSVVFTSFPLEDHERDDETQ+RHDKLDDMI RSM RTTQLQEDEVSDLYLIS LVSVN
Sbjct: 121 KSKSVVFTSFPLEDHERDDETQIRHDKLDDMITRSMPRTTQLQEDEVSDLYLISGLVSVN 180

Query: 225 IGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCW 284
           IGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCW
Sbjct: 181 IGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCW 240

Query: 285 TLVTFGRQVCIDYGPFTFFLIYVLGGISGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQF 344
           TLVTFGRQVC DYGPFTFFLIYVLGG+SGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQF
Sbjct: 241 TLVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQF 300

Query: 345 QSKDVVAKDVSDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGILTCPVVEVN 404
           Q+KDVVAKDV DSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYG+LTCPVVEVN
Sbjct: 301 QNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGLLTCPVVEVN 360

Query: 405 DAGSSSSSASSSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFFIQPPATTLPL 464
           DAGSSS SAS+SSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLF IQPPATTLPL
Sbjct: 361 DAGSSSYSASTSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFLIQPPATTLPL 420

[Close]

BLAST of Cp4.1LG02g14110 vs. ExPASy TrEMBL
Match: A0A6J1K6S0 (RHOMBOID-like protein 9, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492810 PE=3 SV=1)

HSP 1 Score: 768 bits (1984), Expect = 1.76e-278
Identity = 394/421 (93.59%), Postives = 404/421 (95.96%), Query Frame = 0


Query: 45  MVWTRTTKPRRGSLTASLQ-DDKRGRSNGLDSESEVFEQLCRVRECDTNKKQLRSLGSYF 104
           MV TRT KPRRGSLTASLQ DDKR RSNGLDS+SEVFE+LCRVREC+TN+KQLRSLGSYF
Sbjct: 1   MVLTRTRKPRRGSLTASLQRDDKRARSNGLDSDSEVFEKLCRVRECNTNEKQLRSLGSYF 60

Query: 105 GRLQGGGSKRKMVPLKKKVEVVDTGQFKAKKELELLDAYFEKVDNDACMLNHATYNFGGQ 164
           GRLQGGGSKRKMVPLKKKVEVVDTGQFKAKKELELLDAYFEKVDNDAC+ NHATYNFG Q
Sbjct: 61  GRLQGGGSKRKMVPLKKKVEVVDTGQFKAKKELELLDAYFEKVDNDACIHNHATYNFGEQ 120

Query: 165 HKRKSVVFTSFPLEDHERDDETQMRHDKLDDMIKRSMSRTTQLQEDEVSDLYLISALVSV 224
           HK KS VFTS PL+DHERDDETQ+RHDKLDDMIKRSM RT QLQEDEVSDLYLISALVSV
Sbjct: 121 HKSKSFVFTSLPLDDHERDDETQIRHDKLDDMIKRSMPRTAQLQEDEVSDLYLISALVSV 180

Query: 225 NIGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSC 284
           NI VFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSC
Sbjct: 181 NIAVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSC 240

Query: 285 WTLVTFGRQVCIDYGPFTFFLIYVLGGISGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQ 344
           WTLVTFGRQVC DYGPFTFFLIYVLGG+SGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQ
Sbjct: 241 WTLVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQ 300

Query: 345 FQSKDVVAKDVSDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGILTCPVVEV 404
           FQ+KDVVAKDV DSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYG LTCPVVEV
Sbjct: 301 FQNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGFLTCPVVEV 360

Query: 405 NDAGSSSSSASSSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFFIQPPATTLP 464
           NDAGSSSSSASSSSRRGQE+GIKLVRK ADPRKSLAFFALFIMGFTSL FFIQPPATTLP
Sbjct: 361 NDAGSSSSSASSSSRRGQERGIKLVRKCADPRKSLAFFALFIMGFTSLFFFIQPPATTLP 420

[Close]

BLAST of Cp4.1LG02g14110 vs. ExPASy TrEMBL
Match: A0A6J1G9R2 (RHOMBOID-like protein 9, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452077 PE=3 SV=1)

HSP 1 Score: 744 bits (1921), Expect = 3.03e-269
Identity = 383/420 (91.19%), Postives = 389/420 (92.62%), Query Frame = 0


Query: 45  MVWTRTTKPRRGSLTASLQDDKRGRSNGLDSESEVFEQLCRVRECDTNKKQLRSLGSYFG 104
           MVWTRTTKPRRGSLTASLQDDKRGRSNGLDSESEVFE+LCRVRECD NKKQLRSLGSYFG
Sbjct: 1   MVWTRTTKPRRGSLTASLQDDKRGRSNGLDSESEVFEKLCRVRECDANKKQLRSLGSYFG 60

Query: 105 RLQGGGSKRKMVPLKKKVEVVDTGQFKAKKELELLDAYFEKVDNDACMLNHATYNFGGQH 164
           RLQGGGSKRKMVPLKKKVEVVDT                     DACM NHATYNFGGQH
Sbjct: 61  RLQGGGSKRKMVPLKKKVEVVDT---------------------DACMHNHATYNFGGQH 120

Query: 165 KRKSVVFTSFPLEDHERDDETQMRHDKLDDMIKRSMSRTTQLQEDEVSDLYLISALVSVN 224
           K KSVVFTSFPLEDHERDDETQ+RHDKLDDMI RSM RTTQLQEDEVSDLYLIS LVSVN
Sbjct: 121 KSKSVVFTSFPLEDHERDDETQIRHDKLDDMITRSMPRTTQLQEDEVSDLYLISGLVSVN 180

Query: 225 IGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCW 284
           IGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCW
Sbjct: 181 IGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCW 240

Query: 285 TLVTFGRQVCIDYGPFTFFLIYVLGGISGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQF 344
           TLVTFGRQVC DYGPFTFFLIYVLGG+SGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQF
Sbjct: 241 TLVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQF 300

Query: 345 QSKDVVAKDVSDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGILTCPVVEVN 404
           Q+KDVVAKDV DSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYG+LTCPVVEVN
Sbjct: 301 QNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGLLTCPVVEVN 360

Query: 405 DAGSSSSSASSSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFFIQPPATTLPL 464
           DAGSSS SAS+SSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLF IQPPATTLPL
Sbjct: 361 DAGSSSYSASTSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFLIQPPATTLPL 399

[Close]

BLAST of Cp4.1LG02g14110 vs. ExPASy TrEMBL
Match: A0A6J1KFP6 (RHOMBOID-like protein 9, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492810 PE=3 SV=1)

HSP 1 Score: 716 bits (1847), Expect = 5.87e-258
Identity = 373/421 (88.60%), Postives = 383/421 (90.97%), Query Frame = 0


Query: 45  MVWTRTTKPRRGSLTASLQ-DDKRGRSNGLDSESEVFEQLCRVRECDTNKKQLRSLGSYF 104
           MV TRT KPRRGSLTASLQ DDKR RSNGLDS+SEVFE+LCRVREC+TN+KQLRSLGSYF
Sbjct: 1   MVLTRTRKPRRGSLTASLQRDDKRARSNGLDSDSEVFEKLCRVRECNTNEKQLRSLGSYF 60

Query: 105 GRLQGGGSKRKMVPLKKKVEVVDTGQFKAKKELELLDAYFEKVDNDACMLNHATYNFGGQ 164
           GRLQGGGSKRKMVPLKKKVEVVDT                     DAC+ NHATYNFG Q
Sbjct: 61  GRLQGGGSKRKMVPLKKKVEVVDT---------------------DACIHNHATYNFGEQ 120

Query: 165 HKRKSVVFTSFPLEDHERDDETQMRHDKLDDMIKRSMSRTTQLQEDEVSDLYLISALVSV 224
           HK KS VFTS PL+DHERDDETQ+RHDKLDDMIKRSM RT QLQEDEVSDLYLISALVSV
Sbjct: 121 HKSKSFVFTSLPLDDHERDDETQIRHDKLDDMIKRSMPRTAQLQEDEVSDLYLISALVSV 180

Query: 225 NIGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSC 284
           NI VFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSC
Sbjct: 181 NIAVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSC 240

Query: 285 WTLVTFGRQVCIDYGPFTFFLIYVLGGISGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQ 344
           WTLVTFGRQVC DYGPFTFFLIYVLGG+SGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQ
Sbjct: 241 WTLVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQ 300

Query: 345 FQSKDVVAKDVSDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGILTCPVVEV 404
           FQ+KDVVAKDV DSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYG LTCPVVEV
Sbjct: 301 FQNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGFLTCPVVEV 360

Query: 405 NDAGSSSSSASSSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFFIQPPATTLP 464
           NDAGSSSSSASSSSRRGQE+GIKLVRK ADPRKSLAFFALFIMGFTSL FFIQPPATTLP
Sbjct: 361 NDAGSSSSSASSSSRRGQERGIKLVRKCADPRKSLAFFALFIMGFTSLFFFIQPPATTLP 400

[Close]

BLAST of Cp4.1LG02g14110 vs. ExPASy TrEMBL
Match: A0A0A0L0I7 (Rhomboid domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G094530 PE=3 SV=1)

HSP 1 Score: 573 bits (1478), Expect = 1.22e-200
Identity = 309/430 (71.86%), Postives = 354/430 (82.33%), Query Frame = 0


Query: 30  RNHWREISNNNTSVAMVWTRTTKPRRGSLTASLQDDKRGRSNGLDSE-SEVFEQLCRVRE 89
           ++H  EI +N++SV  + TR  K RRG L A L   +   SNGLD E S+V E+L +V E
Sbjct: 46  KHHTWEIHDNDSSVVTISTRARKSRRG-LKALLHHVRC--SNGLDFEHSKVSEKLSQVWE 105

Query: 90  CDTNKKQLRSLGSYFGRLQGGGSKRKMVPLKKKVEVVDTGQFKAKKELELLDAYFEKVDN 149
           C TN+KQLRSLGSYFGRLQG G ++ +  LKK ++V+DTGQFKAKKEL+LLDAYF+KVD 
Sbjct: 106 CSTNEKQLRSLGSYFGRLQGVGDRKNLDSLKK-MKVLDTGQFKAKKELQLLDAYFQKVDK 165

Query: 150 DACMLNHATYNFGGQHKRKSVVFTSFPLEDHERDDETQMRHDKLDDMIKRSMSRTTQLQE 209
              +  H   +F  Q + K +VFT+ P ED  +DDE Q+RH KL  MI +SM   TQLQE
Sbjct: 166 G--LHKHPLSSFDEQEEGK-LVFTTSPSEDRVKDDELQIRHVKLSGMIHKSMPNKTQLQE 225

Query: 210 DEVSDLYLISALVSVNIGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVT 269
           +EV DLYLISALVS+NI VFLFEVASPVK+S L LFSLPSLYGAKINELILVGEWWRLVT
Sbjct: 226 EEVCDLYLISALVSINIAVFLFEVASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVT 285

Query: 270 PMFLHSGAVHVALSCWTLVTFGRQVCIDYGPFTFFLIYVLGGISGNLTSFLHTPEPTIGG 329
           PMFLHSG +HVALSCWTL+TFGRQVC +YGPFTFFLIYVLGG+SGNLTSFLHTP+PT+GG
Sbjct: 286 PMFLHSGVLHVALSCWTLLTFGRQVCREYGPFTFFLIYVLGGVSGNLTSFLHTPDPTVGG 345

Query: 330 TGPVFAMIGAWLSYQFQSKDVVAKDVSDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAF 389
           TGPVFAMIGAWLSYQFQ+KDV+ KDVSD MFLKA+  AV+SSILSNIGPIDEWTHTGAAF
Sbjct: 346 TGPVFAMIGAWLSYQFQNKDVMTKDVSDKMFLKALVAAVISSILSNIGPIDEWTHTGAAF 405

Query: 390 SGMLYGILTCPVVEVNDAGSSSSSASSSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGF 449
           SGMLYG LT P+VEVNDA     S+SSSSRRGQEKGIKLVRKYA+P +SLAFF LFIMGF
Sbjct: 406 SGMLYGFLTSPIVEVNDA-----SSSSSSRRGQEKGIKLVRKYANPCRSLAFFVLFIMGF 463

Query: 450 TSLLFFIQPP 458
            SL+FFIQPP
Sbjct: 466 ISLVFFIQPP 463

[Close]

BLAST of Cp4.1LG02g14110 vs. TAIR 10
Match: AT5G38510.1 (Rhomboid-related intramembrane serine protease family protein )

HSP 1 Score: 272.7 bits (696), Expect = 5.4e-73
Identity = 156/378 (41.27%), Postives = 221/378 (58.47%), Query Frame = 0


Query: 82  QLCRVRECDTN---KKQLRSLGSYFGRLQGGGSKRKMVPLKKKVEVVDTGQFKAKKELEL 141
           +LC VR    N   K++L+ L SYFG+LQ    K     +    ++    +    +EL+ 
Sbjct: 63  RLCLVRASSENKITKQRLKLLDSYFGKLQNDDEKPS---ISTGDDIDRKAELNVNEELDS 122

Query: 142 LDAYFEKVDNDACMLNHATYNFGGQHKRKSVVFTSFPLEDHERDD-ETQMRHDKLDDMIK 201
           L AY +K+  DA              K K +V ++  +   E     +++R   +++   
Sbjct: 123 LSAYLDKLQKDA--------------KSKGLVSSTLDVVKSEGGSVASKLRKTGIENNNS 182

Query: 202 RSMSRTTQLQEDEVSDLYLISALVSVNIGVFLFEVASPVKSSGLPLFSLPSLYGAKINEL 261
                  + Q ++  + Y +S L S+N+GV LFE A+PV+++ + L SLP LYGAKIN+L
Sbjct: 183 PFQQFDDEDQAEDTLNFYAVSILASINVGVCLFEAAAPVRNNNMGLLSLPLLYGAKINDL 242

Query: 262 ILVGEWWRLVTPMFLHSGAVHVALSCWTLVTFGRQVCIDYGPFTFFLIYVLGGISGNLTS 321
           IL GEWWRLVTPMFLHSG  HVALS W L+TFG +VC DYG FTF LIY+LGG+SGN  S
Sbjct: 243 ILAGEWWRLVTPMFLHSGIPHVALSSWALLTFGPKVCRDYGLFTFCLIYILGGVSGNFMS 302

Query: 322 FLHTPEPTIGGTGPVFAMIGAWLSYQFQSKDVVAKDVSDSMFLKAIFVAVVSSILSNIGP 381
           FLHT +PT+GGTGP FA+IGAWL  Q Q+K+++  +  + +F KAI +     ILS+ GP
Sbjct: 303 FLHTADPTVGGTGPAFALIGAWLVDQNQNKEMIKSNEYEDLFQKAIIMTGFGLILSHFGP 362

Query: 382 IDEWTHTGAAFSGMLYGILTCPVVEVNDAGSSSSSASSSSRRGQEKGIKLVRKYADPRKS 441
           ID+WT+ GA  +G++YG  TCPV+++   GS       +   G EK     +  ADP KS
Sbjct: 363 IDDWTNLGALIAGIVYGFFTCPVLQLGSGGSERQEGIVTV--GPEK-----QNSADPCKS 416

Query: 442 LAFFALFIMGFTSLLFFI 456
              F +F+    + L  I
Sbjct: 423 FLLFTIFVAVIVTSLLLI 416

[Close]

BLAST of Cp4.1LG02g14110 vs. TAIR 10
Match: AT5G38510.2 (Rhomboid-related intramembrane serine protease family protein )

HSP 1 Score: 272.7 bits (696), Expect = 5.4e-73
Identity = 156/378 (41.27%), Postives = 221/378 (58.47%), Query Frame = 0


Query: 82  QLCRVRECDTN---KKQLRSLGSYFGRLQGGGSKRKMVPLKKKVEVVDTGQFKAKKELEL 141
           +LC VR    N   K++L+ L SYFG+LQ    K     +    ++    +    +EL+ 
Sbjct: 63  RLCLVRASSENKITKQRLKLLDSYFGKLQNDDEKPS---ISTGDDIDRKAELNVNEELDS 122

Query: 142 LDAYFEKVDNDACMLNHATYNFGGQHKRKSVVFTSFPLEDHERDD-ETQMRHDKLDDMIK 201
           L AY +K+  DA              K K +V ++  +   E     +++R   +++   
Sbjct: 123 LSAYLDKLQKDA--------------KSKGLVSSTLDVVKSEGGSVASKLRKTGIENNNS 182

Query: 202 RSMSRTTQLQEDEVSDLYLISALVSVNIGVFLFEVASPVKSSGLPLFSLPSLYGAKINEL 261
                  + Q ++  + Y +S L S+N+GV LFE A+PV+++ + L SLP LYGAKIN+L
Sbjct: 183 PFQQFDDEDQAEDTLNFYAVSILASINVGVCLFEAAAPVRNNNMGLLSLPLLYGAKINDL 242

Query: 262 ILVGEWWRLVTPMFLHSGAVHVALSCWTLVTFGRQVCIDYGPFTFFLIYVLGGISGNLTS 321
           IL GEWWRLVTPMFLHSG  HVALS W L+TFG +VC DYG FTF LIY+LGG+SGN  S
Sbjct: 243 ILAGEWWRLVTPMFLHSGIPHVALSSWALLTFGPKVCRDYGLFTFCLIYILGGVSGNFMS 302

Query: 322 FLHTPEPTIGGTGPVFAMIGAWLSYQFQSKDVVAKDVSDSMFLKAIFVAVVSSILSNIGP 381
           FLHT +PT+GGTGP FA+IGAWL  Q Q+K+++  +  + +F KAI +     ILS+ GP
Sbjct: 303 FLHTADPTVGGTGPAFALIGAWLVDQNQNKEMIKSNEYEDLFQKAIIMTGFGLILSHFGP 362

Query: 382 IDEWTHTGAAFSGMLYGILTCPVVEVNDAGSSSSSASSSSRRGQEKGIKLVRKYADPRKS 441
           ID+WT+ GA  +G++YG  TCPV+++   GS       +   G EK     +  ADP KS
Sbjct: 363 IDDWTNLGALIAGIVYGFFTCPVLQLGSGGSERQEGIVTV--GPEK-----QNSADPCKS 416

Query: 442 LAFFALFIMGFTSLLFFI 456
              F +F+    + L  I
Sbjct: 423 FLLFTIFVAVIVTSLLLI 416

[Close]

BLAST of Cp4.1LG02g14110 vs. TAIR 10
Match: AT1G25290.2 (RHOMBOID-like protein 10 )

HSP 1 Score: 78.6 bits (192), Expect = 1.5e-14
Identity = 45/173 (26.01%), Postives = 85/173 (49.13%), Query Frame = 0


Query: 218 SALVSVNIGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAV 277
           + L+++N+ +++ ++AS  K            +GAKIN LI  G+ WRL T   LH+  +
Sbjct: 131 NVLLAINVIMYIAQIASDGK---------VLTWGAKINSLIERGQLWRLATASVLHANPM 190

Query: 278 HVALSCWTLVTFGRQVCIDYGPFTFFLIYVLGGISGNLTSFLHTPEPTIGGTGPVFAMIG 337
           H+ ++C++L + G       GP  F  +Y+   ++ +  S+     P++G +G +F ++G
Sbjct: 191 HLMINCYSLNSIGPTAESLGGPKRFLAVYLTSAVASSAMSYWFNKAPSVGASGAIFGLVG 250

Query: 338 AWLSYQFQSKDVVAKDVSDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSG 391
           +   +  + K +V     D M +  I    ++  L +   ID W H G    G
Sbjct: 251 SVAVFVIRHKQMVRGGNEDLMQIAQIIALNMAMGLMS-RRIDNWGHIGGLLGG 293

[Close]

BLAST of Cp4.1LG02g14110 vs. TAIR 10
Match: AT1G25290.1 (RHOMBOID-like protein 10 )

HSP 1 Score: 73.9 bits (180), Expect = 3.7e-13
Identity = 46/180 (25.56%), Postives = 86/180 (47.78%), Query Frame = 0


Query: 218 SALVSVNIGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAV 277
           + L+++N+ +++ ++AS  K            +GAKIN LI  G+ WRL T   LH+  +
Sbjct: 131 NVLLAINVIMYIAQIASDGK---------VLTWGAKINSLIERGQLWRLATASVLHANPM 190

Query: 278 HVALSCWTLVTFGRQVCIDYGPFTFFLIYVLGGIS-------GNLTSFLHTPEPTIGGTG 337
           H+ ++C++L + G       GP  F  +Y+   ++       G+  S+     P++G +G
Sbjct: 191 HLMINCYSLNSIGPTAESLGGPKRFLAVYLTSAVAKPILRVLGSAMSYWFNKAPSVGASG 250

Query: 338 PVFAMIGAWLSYQFQSKDVVAKDVSDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSG 391
            +F ++G+   +  + K +V     D M +  I    ++  L +   ID W H G    G
Sbjct: 251 AIFGLVGSVAVFVIRHKQMVRGGNEDLMQIAQIIALNMAMGLMS-RRIDNWGHIGGLLGG 300

[Close]

BLAST of Cp4.1LG02g14110 vs. TAIR 10
Match: AT5G07250.1 (RHOMBOID-like protein 3 )

HSP 1 Score: 69.7 bits (169), Expect = 7.0e-12
Identity = 42/161 (26.09%), Postives = 85/161 (52.80%), Query Frame = 0


Query: 242 PLF-----SLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCWTLVTFGRQVCID 301
           PLF     +L  L   + ++++   E WRL+T ++LH+G +H+  +  +LV  G ++   
Sbjct: 108 PLFGPSSHTLEKLGALEWSKVVEKKEGWRLLTCIWLHAGVIHLGANMLSLVFIGIRLEQQ 167

Query: 302 YGPFTFFLIYVLGGISGNLTSFLHTPEP-TIGGTGPVFAMIGAWLSYQFQSKDVVAKDVS 361
           +G     +IY+L GI G++ S L      ++G +G +F ++G+ LS  F +  + +  + 
Sbjct: 168 FGFVRIGVIYLLSGIGGSVLSSLFIRNSISVGASGALFGLLGSMLSELFTNWTIYSNKI- 227

Query: 362 DSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGIL 397
            +  L  +FV +++  +  +  +D + H G   +G L G +
Sbjct: 228 -AALLTLLFVILINLAIGILPHVDNFAHVGGFVTGFLLGFI 266

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g14110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFX0	7.6e-72	41.27	RHOMBOID-like protein 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL9 P...	[more]
P54493	2.2e-18	31.91	Rhomboid protease GluP OS=Bacillus subtilis (strain 168) OX=224308 GN=gluP PE=1 ...	[more]
F4ICF4	5.2e-12	25.56	RHOMBOID-like protein 10, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL10...	[more]
Q9LYP1	9.8e-11	26.09	RHOMBOID-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RBL3 PE=2 SV=1	[more]
Q695T8	9.8e-11	26.71	Rhomboid-like protease 4 OS=Toxoplasma gondii OX=5811 GN=ROM4 PE=2 SV=1	[more]

BLAST of Cp4.1LG02g14110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023525918.1	0.0	100.00	RHOMBOID-like protein 9, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023525919.1	3.75e-313	95.47	RHOMBOID-like protein 9, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo]	[more]
KAG7036783.1	9.11e-309	92.55	RHOMBOID-like protein 9, chloroplastic, partial [Cucurbita argyrosperma subsp. a...	[more]
XP_022948383.1	7.59e-289	95.95	RHOMBOID-like protein 9, chloroplastic isoform X1 [Cucurbita moschata]	[more]
XP_022998042.1	3.63e-278	93.59	RHOMBOID-like protein 9, chloroplastic isoform X1 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG02g14110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G965	3.67e-289	95.95	RHOMBOID-like protein 9, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1K6S0	1.76e-278	93.59	RHOMBOID-like protein 9, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1G9R2	3.03e-269	91.19	RHOMBOID-like protein 9, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1KFP6	5.87e-258	88.60	RHOMBOID-like protein 9, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A0A0L0I7	1.22e-200	71.86	Rhomboid domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G094530 PE...	[more]

BLAST of Cp4.1LG02g14110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38510.1	5.4e-73	41.27	Rhomboid-related intramembrane serine protease family protein	[more]
AT5G38510.2	5.4e-73	41.27	Rhomboid-related intramembrane serine protease family protein	[more]
AT1G25290.2	1.5e-14	26.01	RHOMBOID-like protein 10	[more]
AT1G25290.1	3.7e-13	25.56	RHOMBOID-like protein 10	[more]
AT5G07250.1	7.0e-12	26.09	RHOMBOID-like protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035952	Rhomboid-like superfamily	GENE3D	1.20.1540.10		coord: 212..400 e-value: 1.1E-29 score: 105.4
IPR035952	Rhomboid-like superfamily	SUPERFAMILY	144091	Rhomboid-like	coord: 215..400
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 261..398 e-value: 4.0E-27 score: 95.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..73
None	No IPR available	PANTHER	PTHR43731:SF18	RHOMBOID-LIKE PROTEIN 9, CHLOROPLASTIC	coord: 65..459
None	No IPR available	PANTHER	PTHR43731	RHOMBOID PROTEASE	coord: 65..459

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g14110.1	Cp4.1LG02g14110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004252	serine-type endopeptidase activity