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Cp4.1LG02g12330 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTATTTAATAAGAGTATTGATTGAATTAACATTTTAAAAACCCTTCATCGTGGGATTCAGAGATTGAGCGAAGGATTATTGTAATTAAAAATTGAGAATTAGCGATCGATTTCTTGTGTTCTTCAAAAATTTCTCAACCAGAGTGGGGAAGGTTATTCTGGATTTCCTTCCCAACGCCCAGCGGATTTCCGATTTGGAGATTTATGCTTTGATTTTGTTCATCTTTTTGAATTCTTAACAAATCTATGGTTTTCTTTTTCAATCTCTGAATCTCTACCTTCTTCCTTCTCAATGGGATTCACCATCTCCGATGATTTGTTGGGTACTTTCGTCCCGATTTTCGTGTATTGGTTCTATTCTGGGATTTACGTGCTTCTCGGTTTCTTCGAGAATTACCGACTGCACTCCAAGAAAGACGAGGATGAGAAGAACTTGGTTTCAAAATCCACTGTGGTTCGAGGCGTTCTCTTTCAACAATTCATTCAGGCTATTGTCGCCATCATCCTCTTTAAGGTCAGCTCCTACTTTCTATTTCATTTCTTTGCTACTATTGCAATTAATAATCATCGTCGTCGTCGTCGCACTTGTCGTTATTATTGTAATTTAGTTTATTTCTGATCCTAATTATTGGTGGAACCTGCCCTAGAAAATTTCAACTGAGATTCATTTTGCTCATACACTTTGGTGTAACTGTAGTACGATCTTCCTGAGATTTCCTTAGTTTAGCTACTGAGATTGAAAGTTTTGTTGTTTGTGAACCATTTGAGTTTTGACAAAATTAAAGTAACAACTCCTCTTCTCTTTATATGTGCTTTGATCGAAATTAGAGTCTGTCACACCACTGGATGCATCGTTTTTTATATAATTAAACACTGCATATTTAAAACAACATCTATTGCTAATGCTGGCAAAGTGAAAATCATATTTTGTTACTGTAATTTGAATTGATGAAACAAAAATCTGAGAATCTTATAATTTAGTAGGAAACTCGAAAATTTCGATTCCATTCAGGAACAAAAGGGTTGATGATTCAAGCTGGAAATTGGAAGGATAAACTTACAGTTTTTAGCATCCACTGTAAAGTTATATTAGTTGGTGTTAAGCTGTTAGCTTTTGACTTTTAAGTCTTTTGGATATTCAAACTCTAGGAATAGAGGTTCATAAGGAAAGAGTTTGGATGAATAATTTCAAAGCTGTGATCGATGGATTTGAATAAAAGTTTATGCTATTCGCCCCTTTTTTTATTCTTAAATTCCCTTTGAGGTGATCGTTCGGTTACAAATCGAATTGGTCAAAACAACACGGTATTTCTCAATTGTATGAAAATTTAATCGTACTTCCTTTAGCTATAATTCGATTCTCTTGGATTTGTCTATTTAGTTTAGGTTACATATTTAGTTGTGTAATCTTTAATGTTTTGGTTTACTTATATATATGTTTGAAAAAATATCCTCAAGAAGTATTGGGACAGTACCAATCCCCTTTCGTCTTCTGCATTGTAAGAAGTCGACAACTCGTACGAGCTAAAAACCTTGGTTCCGTACAATTGTGTCTGCAATCTTTTTTTTCTTCCTGTGAGTTTCATGCTAAATGAGAAGTAGAACTGTAGTTCTTGTTGTGGATGTTCATGTGAAATATAATTACTGGAGTAAAACTATTATTAAAGTTAGCCTCATCTAAGTGCTGTTAAATGAATTATGTGGCTTTGATCCAGTGGTTAAAGTGGCAAGTCATGAACTTAAATGTTTTCAGCTTATAGCATACTCCCAATTCTGGAAAGGAAAAAGGAATCAATGTTAGATTCTGGCATTACTTATTGATATCATGTGGGTTACCAGCCCTGCACTTGCATCCTAGTTTGTATCCAAATTTATAATTGCATCTTGTTATGTTCAGGTGACTGGAAACGATGATGGGAGCATTGCAGTTCCAAAATCCTGGCCAGTGGTTGTTCTTCAATTTCTAACCGCGATGTTCGTTTTGGACACGTGGCAGTACTTCGCACACAGATACATGCATCATAACAAGTTTCTGTTCAGACACATTCATTCTCAGCACCATAAGCTTGTTGTTCCATATGCGTTTGGGGCTTTGTATAATCATCCTGTGGAAGGACTACTGCTCGACACGGTCGGTGGAGCATTGTCGTTTCTAGTATCTGGTATGACTCCCAGAGTCTCTATCTTCTTCTTTTCCTTTGCAACTATTAAGACCGTAGACGATCACTGTGGATTATGGCTGCCTGGTAACCTCTTCCACGTCTTGTTTCGAAACAATACTGCGTATCACGATGTCCACCATCAGCTATATGGTAGCAAGTTTAATTTCTCACAACCCTTCTTTGTTATATGGGATAGAATACTTGGAACCTACTTGCCTTACTCCTTGGAGAAGAGGGCAGGAGGCGGCTTTGAAGCACGGCCGAAGATTGAATAAATATTGTAAGCAGCCATCTGTTGCTTATATTATATTATTTGTATCCCACAACAATATAATTTGTATATTACTCCTATTGTTGCGCTTTTTATACCCTTTTTTTCACATTGCCCTAACATAGGTTTGAAATATGAGTTGAGATGAGCTTAGGTTGTGTTTTGATATGTTTTCTTAAAACTTCTCTATGGCTTTAGATTAGTCACAATCATTGTGAGTGATGACTTTTGAAGAGCTGCTTCAATCCCAAGTGATAGCTTCTTCTTGTCTTTGTTAGAAAGGTCGTGGTTTTCAGTTATGCATCATAAGCTTGAACAGGGGCCATGTTTGGCTAGGTTGATGTGTTGATGAAGCTTTGGAACCAACCAAATGGAACGAGATGGTTTGGTTTGGTTTGGTTTGGTTCGGTGCATGTTCGGAAATGATTTTGGAATGATTGAAATTACTATTCCGAAAAGGTGGAAAAGTTATTCTCTTATCTTATTTATAGGTTGGATATTTGGAACATTCTAAATTTTATTTTGATAAAGCTAGCGTTGTGTGTCGATGTTTGATCTCTATTACATGTTATATTTAATGGGAATCGAGATTACGTCTAGATA TGTATTTAATAAGAGTATTGATTGAATTAACATTTTAAAAACCCTTCATCGTGGGATTCAGAGATTGAGCGAAGGATTATTGTAATTAAAAATTGAGAATTAGCGATCGATTTCTTGTGTTCTTCAAAAATTTCTCAACCAGAGTGGGGAAGGTTATTCTGGATTTCCTTCCCAACGCCCAGCGGATTTCCGATTTGGAGATTTATGCTTTGATTTTGTTCATCTTTTTGAATTCTTAACAAATCTATGGTTTTCTTTTTCAATCTCTGAATCTCTACCTTCTTCCTTCTCAATGGGATTCACCATCTCCGATGATTTGTTGGGTACTTTCGTCCCGATTTTCGTGTATTGGTTCTATTCTGGGATTTACGTGCTTCTCGGTTTCTTCGAGAATTACCGACTGCACTCCAAGAAAGACGAGGATGAGAAGAACTTGGTTTCAAAATCCACTGTGGTTCGAGGCGTTCTCTTTCAACAATTCATTCAGGCTATTGTCGCCATCATCCTCTTTAAGGTGACTGGAAACGATGATGGGAGCATTGCAGTTCCAAAATCCTGGCCAGTGGTTGTTCTTCAATTTCTAACCGCGATGTTCGTTTTGGACACGTGGCAGTACTTCGCACACAGATACATGCATCATAACAAGTTTCTGTTCAGACACATTCATTCTCAGCACCATAAGCTTGTTGTTCCATATGCGTTTGGGGCTTTGTATAATCATCCTGTGGAAGGACTACTGCTCGACACGGTCGGTGGAGCATTGTCGTTTCTAGTATCTGAATACTTGGAACCTACTTGCCTTACTCCTTGGAGAAGAGGGCAGGAGGCGGCTTTGAAGCACGGCCGAAGATTGAATAAATATTATTAGTCACAATCATTGTGAGTGATGACTTTTGAAGAGCTGCTTCAATCCCAAGTGATAGCTTCTTCTTGTCTTTGTTAGAAAGGTCGTGGTTTTCAGTTATGCATCATAAGCTTGAACAGGGGCCATGTTTGGCTAGGTTGATGTGTTGATGAAGCTTTGGAACCAACCAAATGGAACGAGATGGTTTGGTTTGGTTTGGTTTGGTTCGGTGCATGTTCGGAAATGATTTTGGAATGATTGAAATTACTATTCCGAAAAGGTGGAAAAGTTATTCTCTTATCTTATTTATAGGTTGGATATTTGGAACATTCTAAATTTTATTTTGATAAAGCTAGCGTTGTGTGTCGATGTTTGATCTCTATTACATGTTATATTTAATGGGAATCGAGATTACGTCTAGATA ATGGGATTCACCATCTCCGATGATTTGTTGGGTACTTTCGTCCCGATTTTCGTGTATTGGTTCTATTCTGGGATTTACGTGCTTCTCGGTTTCTTCGAGAATTACCGACTGCACTCCAAGAAAGACGAGGATGAGAAGAACTTGGTTTCAAAATCCACTGTGGTTCGAGGCGTTCTCTTTCAACAATTCATTCAGGCTATTGTCGCCATCATCCTCTTTAAGGTGACTGGAAACGATGATGGGAGCATTGCAGTTCCAAAATCCTGGCCAGTGGTTGTTCTTCAATTTCTAACCGCGATGTTCGTTTTGGACACGTGGCAGTACTTCGCACACAGATACATGCATCATAACAAGTTTCTGTTCAGACACATTCATTCTCAGCACCATAAGCTTGTTGTTCCATATGCGTTTGGGGCTTTGTATAATCATCCTGTGGAAGGACTACTGCTCGACACGGTCGGTGGAGCATTGTCGTTTCTAGTATCTGAATACTTGGAACCTACTTGCCTTACTCCTTGGAGAAGAGGGCAGGAGGCGGCTTTGAAGCACGGCCGAAGATTGAATAAATATTATTAG MGFTISDDLLGTFVPIFVYWFYSGIYVLLGFFENYRLHSKKDEDEKNLVSKSTVVRGVLFQQFIQAIVAIILFKVTGNDDGSIAVPKSWPVVVLQFLTAMFVLDTWQYFAHRYMHHNKFLFRHIHSQHHKLVVPYAFGALYNHPVEGLLLDTVGGALSFLVSEYLEPTCLTPWRRGQEAALKHGRRLNKYY Homology
BLAST of Cp4.1LG02g12330 vs. ExPASy Swiss-Prot
Match: Q8VYI1 (Sphinganine C4-monooxygenase 1 OS=Arabidopsis thaliana OX=3702 GN=SBH1 PE=1 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 5.6e-61 Identity = 116/163 (71.17%), Postives = 137/163 (84.05%), Query Frame = 0
BLAST of Cp4.1LG02g12330 vs. ExPASy Swiss-Prot
Match: Q9AST3 (Sphinganine C4-monooxygenase 2 OS=Arabidopsis thaliana OX=3702 GN=SBH2 PE=1 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 5.2e-59 Identity = 110/164 (67.07%), Postives = 136/164 (82.93%), Query Frame = 0
BLAST of Cp4.1LG02g12330 vs. ExPASy Swiss-Prot
Match: B8B4W4 (Very-long-chain aldehyde decarbonylase GL1-9 OS=Oryza sativa subsp. indica OX=39946 GN=GL1-9 PE=3 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 1.5e-50 Identity = 100/163 (61.35%), Postives = 125/163 (76.69%), Query Frame = 0
BLAST of Cp4.1LG02g12330 vs. ExPASy Swiss-Prot
Match: Q0D4G3 (Very-long-chain aldehyde decarbonylase GL1-9 OS=Oryza sativa subsp. japonica OX=39947 GN=GL1-9 PE=2 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 1.5e-50 Identity = 100/163 (61.35%), Postives = 125/163 (76.69%), Query Frame = 0
BLAST of Cp4.1LG02g12330 vs. ExPASy Swiss-Prot
Match: O94298 (Sphingolipid C4-hydroxylase sur2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sur2 PE=3 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 1.7e-25 Identity = 66/180 (36.67%), Postives = 95/180 (52.78%), Query Frame = 0
BLAST of Cp4.1LG02g12330 vs. NCBI nr
Match: XP_023523598.1 (sphinganine C4-monooxygenase 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 325 bits (832), Expect = 4.28e-110 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g12330 vs. NCBI nr
Match: XP_022949326.1 (sphinganine C4-monooxygenase 1-like [Cucurbita moschata] >KAG6607119.1 Sphinganine C4-monooxygenase 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036810.1 Sphinganine C4-monooxygenase 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 324 bits (831), Expect = 6.07e-110 Identity = 161/162 (99.38%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g12330 vs. NCBI nr
Match: XP_022998593.1 (sphinganine C4-monooxygenase 1-like [Cucurbita maxima]) HSP 1 Score: 324 bits (830), Expect = 8.62e-110 Identity = 161/162 (99.38%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g12330 vs. NCBI nr
Match: XP_008441706.1 (PREDICTED: sphinganine C4-monooxygenase 1-like [Cucumis melo] >KAA0032268.1 sphinganine C4-monooxygenase 1-like [Cucumis melo var. makuwa] >TYK17072.1 sphinganine C4-monooxygenase 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 308 bits (790), Expect = 1.05e-103 Identity = 152/162 (93.83%), Postives = 158/162 (97.53%), Query Frame = 0
BLAST of Cp4.1LG02g12330 vs. NCBI nr
Match: XP_038889456.1 (sphinganine C4-monooxygenase 1-like [Benincasa hispida]) HSP 1 Score: 308 bits (789), Expect = 1.50e-103 Identity = 153/162 (94.44%), Postives = 157/162 (96.91%), Query Frame = 0
BLAST of Cp4.1LG02g12330 vs. ExPASy TrEMBL
Match: A0A6J1GBQ9 (sphinganine C4-monooxygenase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111452712 PE=3 SV=1) HSP 1 Score: 324 bits (831), Expect = 2.94e-110 Identity = 161/162 (99.38%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g12330 vs. ExPASy TrEMBL
Match: A0A6J1KH66 (sphinganine C4-monooxygenase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111493180 PE=3 SV=1) HSP 1 Score: 324 bits (830), Expect = 4.17e-110 Identity = 161/162 (99.38%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g12330 vs. ExPASy TrEMBL
Match: A0A5D3CZU2 (Sphinganine C4-monooxygenase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1327G00180 PE=3 SV=1) HSP 1 Score: 308 bits (790), Expect = 5.11e-104 Identity = 152/162 (93.83%), Postives = 158/162 (97.53%), Query Frame = 0
BLAST of Cp4.1LG02g12330 vs. ExPASy TrEMBL
Match: A0A1S3B426 (sphinganine C4-monooxygenase 1-like OS=Cucumis melo OX=3656 GN=LOC103485785 PE=3 SV=1) HSP 1 Score: 308 bits (790), Expect = 5.11e-104 Identity = 152/162 (93.83%), Postives = 158/162 (97.53%), Query Frame = 0
BLAST of Cp4.1LG02g12330 vs. ExPASy TrEMBL
Match: A0A6J1DY75 (sphinganine C4-monooxygenase 1-like OS=Momordica charantia OX=3673 GN=LOC111025684 PE=3 SV=1) HSP 1 Score: 308 bits (789), Expect = 7.25e-104 Identity = 152/162 (93.83%), Postives = 159/162 (98.15%), Query Frame = 0
BLAST of Cp4.1LG02g12330 vs. TAIR 10
Match: AT1G69640.1 (sphingoid base hydroxylase 1 ) HSP 1 Score: 235.3 bits (599), Expect = 4.0e-62 Identity = 116/163 (71.17%), Postives = 137/163 (84.05%), Query Frame = 0
BLAST of Cp4.1LG02g12330 vs. TAIR 10
Match: AT1G14290.1 (sphingoid base hydroxylase 2 ) HSP 1 Score: 228.8 bits (582), Expect = 3.7e-60 Identity = 110/164 (67.07%), Postives = 136/164 (82.93%), Query Frame = 0
BLAST of Cp4.1LG02g12330 vs. TAIR 10
Match: AT2G29390.1 (sterol 4-alpha-methyl-oxidase 2-2 ) HSP 1 Score: 53.9 bits (128), Expect = 1.6e-07 Identity = 47/159 (29.56%), Postives = 79/159 (49.69%), Query Frame = 0
BLAST of Cp4.1LG02g12330 vs. TAIR 10
Match: AT2G29390.3 (sterol 4-alpha-methyl-oxidase 2-2 ) HSP 1 Score: 53.9 bits (128), Expect = 1.6e-07 Identity = 47/159 (29.56%), Postives = 79/159 (49.69%), Query Frame = 0
BLAST of Cp4.1LG02g12330 vs. TAIR 10
Match: AT2G29390.2 (sterol 4-alpha-methyl-oxidase 2-2 ) HSP 1 Score: 53.9 bits (128), Expect = 1.6e-07 Identity = 47/159 (29.56%), Postives = 79/159 (49.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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