Cp4.1LG02g12140 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g12140
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	EID1-like F-box protein 2
Location	Cp4.1LG02: 11980079 .. 11981559 (-)
RNA-Seq Expression	Cp4.1LG02g12140
Synteny	Cp4.1LG02g12140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTCTTCTTCATTTTCTTCTTTTCCTCTTCTTGTTTTTATCTTGTTTCTTTGTTCGGCTTTAGTGCAATGGGAACGAAATTGACTGATTTCTTGCTTCGTTTCTTGCATGCAGAGTCGGGTTTTGGTGCTATGTTAACGCGGGGAGACTGGGTCCGTTCCGCTGAGGTGAGTCTTTTTCTTTTTCTCAAGACGATCTACTTTGTTATCTGGTGTTGTGTGTTCGTTCTTCTTATGGATTTTGTAGGGTTTTATTTATTATTATTTTTTTGGAATTGAATGAGTAATTATTTTGGGGTTTATTTGATTTAGGTGGTTGTTTTTTGTGATGTATGTTGCCGAGGATTTTGTGGATCTGACTCTAATTTACTAAACTTGCTTGAAGAATTCTGCTAGAGTTTGGGGTTTATGTGTTAATTGAGTATCTATGCGTGCCTTGGAGTCTATGGTGAATGCTAATTCATTTCATTGTGTTTAAATTTACTTCGTTATTCTTGAATTGACTTGATTGATTAATCACTTCGATGTTTCGAGTCTATGGTATTGGTTTTAGTTTCTTAACCATTGCTCGAGGCATCATGGGTGTCTAAGGCTTGTTCGATGTATACAGTGTACAATAGTTCATTGGTGTGAAGATTGTTGATCGGAGCTTGGTTTTTCAACAGCTGCTCATTCAATCTAATCTATTGACAACCCATGCTAGATTAATTAATGGTTCCCAGATGCCCATGAAGGAATGATTTTAACGAAGCAATACCGGTGTGTGCATTCAGCGAGCTGCCTGTGCACAAAGGGGCATCTCAGTGAGGATGCAGTATTTCTAGTATTCCAATATTTGAACTGGAATCCGAAGTTGATTGCCACTCTTTCCTGTGCATGCAAATGGTTTGACGATCTTGCCAAGCGAGTGCTATGGAAGGAGTTTTGCAGGACCAGAGCCCCAAAAATGATGCTAGATCTGCAATCTAGCGGGAGTCACAGTGTTGATGGGAACTGGAGGGCACTGGGGAAGCTGCTTATTTTCTGCTCGGGATGTAAGAAGGGCGGTCTCTTCAATAACATTCAAATTCCTGGTCATTTTGTTTATAGAACCCGATTTTCTAGGACATCGGGCAAGAGTTTTCTTATGCCACAATGCAGAACAGATATTTTATATGTATCTGATCCTTGTGAACATCTCGACCAAGGGGAAGAAGGAGATATCGGTTTCTTCCGGGGTATTTTTAAGTCATTTTCAATGTCAAAGGTTAGGAAAATGCTGATAGAAAGAGGAGCAGAGCTTCATCCAACTGAGGTGTGCCCTTATTGTAAGGCCAAGCTATGGAGCATGCTACAGGCTAAAATGATACCACCGAGTGCAAGCTGCAGATTGGGTGCTTATGAGGATTGCATCGACTACTATGTCTGCCTCAATGGACATATGGTCGGTATTTGCACTCTGTTACCCTTGTCAGATTCTGAAGAGACGTCGGAGTTGGAGTGA

mRNA sequence

GCTCTTCTTCATTTTCTTCTTTTCCTCTTCTTGTTTTTATCTTGTTTCTTTGTTCGGCTTTAGTGCAATGGGAACGAAATTGACTGATTTCTTGCTTCGTTTCTTGCATGCAGAGTCGGGTTTTGGTGCTATGTTAACGCGGGGAGACTGGGTCCGTTCCGCTGAGTTGATTGCCACTCTTTCCTGTGCATGCAAATGGTTTGACGATCTTGCCAAGCGAGTGCTATGGAAGGAGTTTTGCAGGACCAGAGCCCCAAAAATGATGCTAGATCTGCAATCTAGCGGGAGTCACAGTGTTGATGGGAACTGGAGGGCACTGGGGAAGCTGCTTATTTTCTGCTCGGGATGTAAGAAGGGCGGTCTCTTCAATAACATTCAAATTCCTGGTCATTTTGTTTATAGAACCCGATTTTCTAGGACATCGGGCAAGAGTTTTCTTATGCCACAATGCAGAACAGATATTTTATATGTATCTGATCCTTGTGAACATCTCGACCAAGGGGAAGAAGGAGATATCGGTTTCTTCCGGGGTATTTTTAAGTCATTTTCAATGTCAAAGGTTAGGAAAATGCTGATAGAAAGAGGAGCAGAGCTTCATCCAACTGAGGTGTGCCCTTATTGTAAGGCCAAGCTATGGAGCATGCTACAGGCTAAAATGATACCACCGAGTGCAAGCTGCAGATTGGGTGCTTATGAGGATTGCATCGACTACTATGTCTGCCTCAATGGACATATGGTCGGTATTTGCACTCTGTTACCCTTGTCAGATTCTGAAGAGACGTCGGAGTTGGAGTGA

Coding sequence (CDS)

ATGGGAACGAAATTGACTGATTTCTTGCTTCGTTTCTTGCATGCAGAGTCGGGTTTTGGTGCTATGTTAACGCGGGGAGACTGGGTCCGTTCCGCTGAGTTGATTGCCACTCTTTCCTGTGCATGCAAATGGTTTGACGATCTTGCCAAGCGAGTGCTATGGAAGGAGTTTTGCAGGACCAGAGCCCCAAAAATGATGCTAGATCTGCAATCTAGCGGGAGTCACAGTGTTGATGGGAACTGGAGGGCACTGGGGAAGCTGCTTATTTTCTGCTCGGGATGTAAGAAGGGCGGTCTCTTCAATAACATTCAAATTCCTGGTCATTTTGTTTATAGAACCCGATTTTCTAGGACATCGGGCAAGAGTTTTCTTATGCCACAATGCAGAACAGATATTTTATATGTATCTGATCCTTGTGAACATCTCGACCAAGGGGAAGAAGGAGATATCGGTTTCTTCCGGGGTATTTTTAAGTCATTTTCAATGTCAAAGGTTAGGAAAATGCTGATAGAAAGAGGAGCAGAGCTTCATCCAACTGAGGTGTGCCCTTATTGTAAGGCCAAGCTATGGAGCATGCTACAGGCTAAAATGATACCACCGAGTGCAAGCTGCAGATTGGGTGCTTATGAGGATTGCATCGACTACTATGTCTGCCTCAATGGACATATGGTCGGTATTTGCACTCTGTTACCCTTGTCAGATTCTGAAGAGACGTCGGAGTTGGAGTGA

Protein sequence

MGTKLTDFLLRFLHAESGFGAMLTRGDWVRSAELIATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIFCSGCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGFFRGIFKSFSMSKVRKMLIERGAELHPTEVCPYCKAKLWSMLQAKMIPPSASCRLGAYEDCIDYYVCLNGHMVGICTLLPLSDSEETSELE

Homology

[Close]

BLAST of Cp4.1LG02g12140 vs. ExPASy Swiss-Prot
Match: Q9FLZ8 (EID1-like F-box protein 2 OS=Arabidopsis thaliana OX=3702 GN=EDL2 PE=1 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 2.9e-107
Identity = 177/210 (84.29%), Postives = 194/210 (92.38%), Query Frame = 0


Query: 34  LIATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIFCSG 93
           +IATLSC CKWFDDLAKR+LWKEFCR RAPKMM DLQSSGSHSVDG+WRALGKLLI+CSG
Sbjct: 40  VIATLSCVCKWFDDLAKRLLWKEFCRARAPKMMSDLQSSGSHSVDGSWRALGKLLIYCSG 99

Query: 94  CKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRT-DILYVSDPCEHLDQGEEGDIGF 153
             KGGLFN++QI GHFV+RTRFSRTSG+SFL PQCRT DILYVSDPCEHLDQGE+GD+GF
Sbjct: 100 SSKGGLFNDVQISGHFVHRTRFSRTSGRSFLPPQCRTDDILYVSDPCEHLDQGEDGDLGF 159

Query: 154 FRGIFKSFSMSKVRKMLIERGAELHPTEVCPYCKAKLWSMLQAKMIPPSASCRLGAYEDC 213
           FRGIFKSFSMSKVRK+LI++G   HPTEVCPYCKAKLWSMLQAKMIP SASCRLGAYED 
Sbjct: 160 FRGIFKSFSMSKVRKLLIKKGTPFHPTEVCPYCKAKLWSMLQAKMIPQSASCRLGAYEDS 219

Query: 214 IDYYVCLNGHMVGICTLLPLSDSEETSELE 243
           I+YYVCLNGHM+G+CTLLPLSDSE  SE +
Sbjct: 220 IEYYVCLNGHMLGVCTLLPLSDSEGASEFQ 249

[Close]

BLAST of Cp4.1LG02g12140 vs. ExPASy Swiss-Prot
Match: Q9LF38 (EID1-like F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EDL1 PE=2 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 7.0e-101
Identity = 162/206 (78.64%), Postives = 184/206 (89.32%), Query Frame = 0


Query: 33  ELIATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIFCS 92
           +L+ATLSC C+WFDD AKRVLWKEFC+TRAPKMMLDLQSSGSH +DGNWRALGKLLI+CS
Sbjct: 39  KLVATLSCVCRWFDDFAKRVLWKEFCKTRAPKMMLDLQSSGSHCIDGNWRALGKLLIYCS 98

Query: 93  GCKKGGLFN-NIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIG 152
           GC +GGLFN ++QIPGHFVYRTRFSRT G+S L PQCRTD+LYV DPCEHLDQGEEGD+G
Sbjct: 99  GCTQGGLFNSSVQIPGHFVYRTRFSRTLGRSLLPPQCRTDVLYVCDPCEHLDQGEEGDVG 158

Query: 153 FFRGIFKSFSMSKVRKMLIERGAELHPTEVCPYCKAKLWSMLQAKMIPPSASCRLGAYED 212
            FRGIFKSF  SKVRK++I +    HP+EVCPYCKAKLWSMLQAK+IP SA  RL AYED
Sbjct: 159 LFRGIFKSFPTSKVRKVIINKAVPFHPSEVCPYCKAKLWSMLQAKIIPQSACIRLEAYED 218

Query: 213 CIDYYVCLNGHMVGICTLLPLSDSEE 238
           CI+Y+VCLNGH++GICTL PLSDSE+
Sbjct: 219 CIEYFVCLNGHLLGICTLAPLSDSED 244

[Close]

BLAST of Cp4.1LG02g12140 vs. ExPASy Swiss-Prot
Match: Q93ZT5 (EID1-like F-box protein 3 OS=Arabidopsis thaliana OX=3702 GN=EDL3 PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.8e-49
Identity = 90/205 (43.90%), Postives = 127/205 (61.95%), Query Frame = 0


Query: 35  IATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSG-SHSVDGNWRALGKLLIFCSG 94
           + T++   + F  +A+R+LW+  C  RAP M+  L     S  +DG W AL KL+ FC G
Sbjct: 54  LCTIASLSRRFCAIARRILWRRLCVNRAPGMVAALSGEDPSGRIDGGWHALAKLMFFCGG 113

Query: 95  CKKGGLFNNIQ-IPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF 154
            +    FN  Q   GHF   +RFS+TSG+ FL   CR D+LY+SDPCEH   G +  +G 
Sbjct: 114 GESTRYFNLSQPTSGHFACESRFSKTSGRFFLPKNCRRDLLYMSDPCEHQAVGGDEHLGV 173

Query: 155 FRGIFKSFSMSKVRKMLIERGAELHPTEVCPYCKAKLWSMLQAKMIPPSASCRLGAYEDC 214
           FRG+F+ F  SK R+ L+ R A L     CPYC  ++WSM  A+++P SA+ RLG+ E  
Sbjct: 174 FRGVFREFMRSKTRECLVRRQAALEEKVRCPYCGGRVWSMTAARLVPKSAARRLGSREGG 233

Query: 215 IDYYVCLNGHMVGICTLLPLSDSEE 238
           ++++VC+NGH+ G C L+PLS  EE
Sbjct: 234 LEFFVCVNGHLHGTCWLIPLSSEEE 258

[Close]

BLAST of Cp4.1LG02g12140 vs. NCBI nr
Match: XP_022949321.1 (EID1-like F-box protein 2 [Cucurbita moschata] >XP_022949322.1 EID1-like F-box protein 2 [Cucurbita moschata] >XP_022949323.1 EID1-like F-box protein 2 [Cucurbita moschata] >XP_023523725.1 EID1-like F-box protein 2 [Cucurbita pepo subsp. pepo] >XP_023523726.1 EID1-like F-box protein 2 [Cucurbita pepo subsp. pepo] >XP_023523728.1 EID1-like F-box protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 447 bits (1149), Expect = 1.43e-157
Identity = 209/210 (99.52%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 33  ELIATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIFCS 92
           +LIATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIFCS
Sbjct: 39  KLIATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIFCS 98

Query: 93  GCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF 152
           GCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF
Sbjct: 99  GCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF 158

Query: 153 FRGIFKSFSMSKVRKMLIERGAELHPTEVCPYCKAKLWSMLQAKMIPPSASCRLGAYEDC 212
           FRGIFKSFSMSKVRKMLIERGAELHPTEVCPYCKAKLWSMLQAKMIPPSASCRLGAYEDC
Sbjct: 159 FRGIFKSFSMSKVRKMLIERGAELHPTEVCPYCKAKLWSMLQAKMIPPSASCRLGAYEDC 218

Query: 213 IDYYVCLNGHMVGICTLLPLSDSEETSELE 242
           IDYYVCLNGHMVGICTLLPLSDSEETSELE
Sbjct: 219 IDYYVCLNGHMVGICTLLPLSDSEETSELE 248

[Close]

BLAST of Cp4.1LG02g12140 vs. NCBI nr
Match: XP_022997892.1 (EID1-like F-box protein 2 [Cucurbita maxima] >XP_022997893.1 EID1-like F-box protein 2 [Cucurbita maxima] >XP_022997894.1 EID1-like F-box protein 2 [Cucurbita maxima])

HSP 1 Score: 441 bits (1134), Expect = 2.58e-155
Identity = 206/208 (99.04%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 33  ELIATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIFCS 92
           +LIA LSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIFCS
Sbjct: 39  KLIAILSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIFCS 98

Query: 93  GCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF 152
           GCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF
Sbjct: 99  GCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF 158

Query: 153 FRGIFKSFSMSKVRKMLIERGAELHPTEVCPYCKAKLWSMLQAKMIPPSASCRLGAYEDC 212
           FRGIFKSFSMSKVRKMLIERGAELHPTEVCPYCKAKLWSMLQAKMIPPSASCRLGAYEDC
Sbjct: 159 FRGIFKSFSMSKVRKMLIERGAELHPTEVCPYCKAKLWSMLQAKMIPPSASCRLGAYEDC 218

Query: 213 IDYYVCLNGHMVGICTLLPLSDSEETSE 240
           IDYYVCLNGHMVGICTLLPLSDSEETSE
Sbjct: 219 IDYYVCLNGHMVGICTLLPLSDSEETSE 246

[Close]

BLAST of Cp4.1LG02g12140 vs. NCBI nr
Match: XP_038877395.1 (EID1-like F-box protein 2 [Benincasa hispida])

HSP 1 Score: 440 bits (1131), Expect = 7.93e-155
Identity = 205/210 (97.62%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 33  ELIATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIFCS 92
           +LIATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLI+CS
Sbjct: 39  KLIATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIYCS 98

Query: 93  GCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF 152
           GCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF
Sbjct: 99  GCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF 158

Query: 153 FRGIFKSFSMSKVRKMLIERGAELHPTEVCPYCKAKLWSMLQAKMIPPSASCRLGAYEDC 212
           FRGIFKSFSMSKVRKMLI+RGAELHPTEVCPYCKAKLWSMLQAKMIP SASCRLGAYEDC
Sbjct: 159 FRGIFKSFSMSKVRKMLIKRGAELHPTEVCPYCKAKLWSMLQAKMIPQSASCRLGAYEDC 218

Query: 213 IDYYVCLNGHMVGICTLLPLSDSEETSELE 242
           IDYYVCLNGHM+GICTLLPLSDSEETSELE
Sbjct: 219 IDYYVCLNGHMLGICTLLPLSDSEETSELE 248

[Close]

BLAST of Cp4.1LG02g12140 vs. NCBI nr
Match: XP_004149843.1 (EID1-like F-box protein 2 [Cucumis sativus] >XP_008450153.1 PREDICTED: EID1-like F-box protein 2 [Cucumis melo] >XP_011651519.1 EID1-like F-box protein 2 [Cucumis sativus] >XP_016900846.1 PREDICTED: EID1-like F-box protein 2 [Cucumis melo] >KAA0060320.1 EID1-like F-box protein 2 [Cucumis melo var. makuwa] >KGN58110.1 hypothetical protein Csa_017646 [Cucumis sativus] >TYK22070.1 EID1-like F-box protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 440 bits (1131), Expect = 7.93e-155
Identity = 205/210 (97.62%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 33  ELIATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIFCS 92
           +LIATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLI+CS
Sbjct: 39  KLIATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIYCS 98

Query: 93  GCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF 152
           GCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF
Sbjct: 99  GCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF 158

Query: 153 FRGIFKSFSMSKVRKMLIERGAELHPTEVCPYCKAKLWSMLQAKMIPPSASCRLGAYEDC 212
           FRGIFKSFSMSKVRKMLI+RGAELHPTEVCPYCKAKLWSMLQAKMIP SASCRLGAYEDC
Sbjct: 159 FRGIFKSFSMSKVRKMLIKRGAELHPTEVCPYCKAKLWSMLQAKMIPQSASCRLGAYEDC 218

Query: 213 IDYYVCLNGHMVGICTLLPLSDSEETSELE 242
           IDYYVCLNGHM+GICTLLPLSDSEETSELE
Sbjct: 219 IDYYVCLNGHMLGICTLLPLSDSEETSELE 248

[Close]

BLAST of Cp4.1LG02g12140 vs. NCBI nr
Match: XP_022144516.1 (EID1-like F-box protein 2 [Momordica charantia])

HSP 1 Score: 438 bits (1127), Expect = 3.23e-154
Identity = 203/210 (96.67%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 33  ELIATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIFCS 92
           +LIAT+SCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIFCS
Sbjct: 39  KLIATMSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIFCS 98

Query: 93  GCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF 152
           GCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF
Sbjct: 99  GCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF 158

Query: 153 FRGIFKSFSMSKVRKMLIERGAELHPTEVCPYCKAKLWSMLQAKMIPPSASCRLGAYEDC 212
           FRG+FKSFSMSKVR+MLI+RGAELHPTEVCPYCKAKLWSMLQAKMIP SASCRLGAYEDC
Sbjct: 159 FRGVFKSFSMSKVRQMLIKRGAELHPTEVCPYCKAKLWSMLQAKMIPQSASCRLGAYEDC 218

Query: 213 IDYYVCLNGHMVGICTLLPLSDSEETSELE 242
           IDYYVCLNGHM+GICTLLPLSDSEETSELE
Sbjct: 219 IDYYVCLNGHMLGICTLLPLSDSEETSELE 248

[Close]

BLAST of Cp4.1LG02g12140 vs. ExPASy TrEMBL
Match: A0A6J1GBQ5 (EID1-like F-box protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111452709 PE=4 SV=1)

HSP 1 Score: 447 bits (1149), Expect = 6.94e-158
Identity = 209/210 (99.52%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 33  ELIATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIFCS 92
           +LIATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIFCS
Sbjct: 39  KLIATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIFCS 98

Query: 93  GCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF 152
           GCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF
Sbjct: 99  GCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF 158

Query: 153 FRGIFKSFSMSKVRKMLIERGAELHPTEVCPYCKAKLWSMLQAKMIPPSASCRLGAYEDC 212
           FRGIFKSFSMSKVRKMLIERGAELHPTEVCPYCKAKLWSMLQAKMIPPSASCRLGAYEDC
Sbjct: 159 FRGIFKSFSMSKVRKMLIERGAELHPTEVCPYCKAKLWSMLQAKMIPPSASCRLGAYEDC 218

Query: 213 IDYYVCLNGHMVGICTLLPLSDSEETSELE 242
           IDYYVCLNGHMVGICTLLPLSDSEETSELE
Sbjct: 219 IDYYVCLNGHMVGICTLLPLSDSEETSELE 248

[Close]

BLAST of Cp4.1LG02g12140 vs. ExPASy TrEMBL
Match: A0A6J1KCU0 (EID1-like F-box protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111492711 PE=4 SV=1)

HSP 1 Score: 441 bits (1134), Expect = 1.25e-155
Identity = 206/208 (99.04%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 33  ELIATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIFCS 92
           +LIA LSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIFCS
Sbjct: 39  KLIAILSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIFCS 98

Query: 93  GCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF 152
           GCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF
Sbjct: 99  GCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF 158

Query: 153 FRGIFKSFSMSKVRKMLIERGAELHPTEVCPYCKAKLWSMLQAKMIPPSASCRLGAYEDC 212
           FRGIFKSFSMSKVRKMLIERGAELHPTEVCPYCKAKLWSMLQAKMIPPSASCRLGAYEDC
Sbjct: 159 FRGIFKSFSMSKVRKMLIERGAELHPTEVCPYCKAKLWSMLQAKMIPPSASCRLGAYEDC 218

Query: 213 IDYYVCLNGHMVGICTLLPLSDSEETSE 240
           IDYYVCLNGHMVGICTLLPLSDSEETSE
Sbjct: 219 IDYYVCLNGHMVGICTLLPLSDSEETSE 246

[Close]

BLAST of Cp4.1LG02g12140 vs. ExPASy TrEMBL
Match: A0A1S3BP99 (EID1-like F-box protein 2 OS=Cucumis melo OX=3656 GN=LOC103491829 PE=4 SV=1)

HSP 1 Score: 440 bits (1131), Expect = 3.84e-155
Identity = 205/210 (97.62%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 33  ELIATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIFCS 92
           +LIATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLI+CS
Sbjct: 39  KLIATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIYCS 98

Query: 93  GCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF 152
           GCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF
Sbjct: 99  GCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF 158

Query: 153 FRGIFKSFSMSKVRKMLIERGAELHPTEVCPYCKAKLWSMLQAKMIPPSASCRLGAYEDC 212
           FRGIFKSFSMSKVRKMLI+RGAELHPTEVCPYCKAKLWSMLQAKMIP SASCRLGAYEDC
Sbjct: 159 FRGIFKSFSMSKVRKMLIKRGAELHPTEVCPYCKAKLWSMLQAKMIPQSASCRLGAYEDC 218

Query: 213 IDYYVCLNGHMVGICTLLPLSDSEETSELE 242
           IDYYVCLNGHM+GICTLLPLSDSEETSELE
Sbjct: 219 IDYYVCLNGHMLGICTLLPLSDSEETSELE 248

[Close]

BLAST of Cp4.1LG02g12140 vs. ExPASy TrEMBL
Match: A0A5A7UYZ3 (EID1-like F-box protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G00530 PE=4 SV=1)

HSP 1 Score: 440 bits (1131), Expect = 3.84e-155
Identity = 205/210 (97.62%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 33  ELIATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIFCS 92
           +LIATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLI+CS
Sbjct: 39  KLIATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIYCS 98

Query: 93  GCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF 152
           GCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF
Sbjct: 99  GCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF 158

Query: 153 FRGIFKSFSMSKVRKMLIERGAELHPTEVCPYCKAKLWSMLQAKMIPPSASCRLGAYEDC 212
           FRGIFKSFSMSKVRKMLI+RGAELHPTEVCPYCKAKLWSMLQAKMIP SASCRLGAYEDC
Sbjct: 159 FRGIFKSFSMSKVRKMLIKRGAELHPTEVCPYCKAKLWSMLQAKMIPQSASCRLGAYEDC 218

Query: 213 IDYYVCLNGHMVGICTLLPLSDSEETSELE 242
           IDYYVCLNGHM+GICTLLPLSDSEETSELE
Sbjct: 219 IDYYVCLNGHMLGICTLLPLSDSEETSELE 248

[Close]

BLAST of Cp4.1LG02g12140 vs. ExPASy TrEMBL
Match: A0A0A0L849 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G516490 PE=4 SV=1)

HSP 1 Score: 440 bits (1131), Expect = 3.84e-155
Identity = 205/210 (97.62%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 33  ELIATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIFCS 92
           +LIATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLI+CS
Sbjct: 39  KLIATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIYCS 98

Query: 93  GCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF 152
           GCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF
Sbjct: 99  GCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF 158

Query: 153 FRGIFKSFSMSKVRKMLIERGAELHPTEVCPYCKAKLWSMLQAKMIPPSASCRLGAYEDC 212
           FRGIFKSFSMSKVRKMLI+RGAELHPTEVCPYCKAKLWSMLQAKMIP SASCRLGAYEDC
Sbjct: 159 FRGIFKSFSMSKVRKMLIKRGAELHPTEVCPYCKAKLWSMLQAKMIPQSASCRLGAYEDC 218

Query: 213 IDYYVCLNGHMVGICTLLPLSDSEETSELE 242
           IDYYVCLNGHM+GICTLLPLSDSEETSELE
Sbjct: 219 IDYYVCLNGHMLGICTLLPLSDSEETSELE 248

[Close]

BLAST of Cp4.1LG02g12140 vs. TAIR 10
Match: AT5G39360.1 (EID1-like 2 )

HSP 1 Score: 389.4 bits (999), Expect = 2.1e-108
Identity = 177/210 (84.29%), Postives = 194/210 (92.38%), Query Frame = 0


Query: 34  LIATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIFCSG 93
           +IATLSC CKWFDDLAKR+LWKEFCR RAPKMM DLQSSGSHSVDG+WRALGKLLI+CSG
Sbjct: 40  VIATLSCVCKWFDDLAKRLLWKEFCRARAPKMMSDLQSSGSHSVDGSWRALGKLLIYCSG 99

Query: 94  CKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRT-DILYVSDPCEHLDQGEEGDIGF 153
             KGGLFN++QI GHFV+RTRFSRTSG+SFL PQCRT DILYVSDPCEHLDQGE+GD+GF
Sbjct: 100 SSKGGLFNDVQISGHFVHRTRFSRTSGRSFLPPQCRTDDILYVSDPCEHLDQGEDGDLGF 159

Query: 154 FRGIFKSFSMSKVRKMLIERGAELHPTEVCPYCKAKLWSMLQAKMIPPSASCRLGAYEDC 213
           FRGIFKSFSMSKVRK+LI++G   HPTEVCPYCKAKLWSMLQAKMIP SASCRLGAYED 
Sbjct: 160 FRGIFKSFSMSKVRKLLIKKGTPFHPTEVCPYCKAKLWSMLQAKMIPQSASCRLGAYEDS 219

Query: 214 IDYYVCLNGHMVGICTLLPLSDSEETSELE 243
           I+YYVCLNGHM+G+CTLLPLSDSE  SE +
Sbjct: 220 IEYYVCLNGHMLGVCTLLPLSDSEGASEFQ 249

[Close]

BLAST of Cp4.1LG02g12140 vs. TAIR 10
Match: AT5G15440.1 (EID1-like 1 )

HSP 1 Score: 368.2 bits (944), Expect = 4.9e-102
Identity = 162/206 (78.64%), Postives = 184/206 (89.32%), Query Frame = 0


Query: 33  ELIATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIFCS 92
           +L+ATLSC C+WFDD AKRVLWKEFC+TRAPKMMLDLQSSGSH +DGNWRALGKLLI+CS
Sbjct: 39  KLVATLSCVCRWFDDFAKRVLWKEFCKTRAPKMMLDLQSSGSHCIDGNWRALGKLLIYCS 98

Query: 93  GCKKGGLFN-NIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIG 152
           GC +GGLFN ++QIPGHFVYRTRFSRT G+S L PQCRTD+LYV DPCEHLDQGEEGD+G
Sbjct: 99  GCTQGGLFNSSVQIPGHFVYRTRFSRTLGRSLLPPQCRTDVLYVCDPCEHLDQGEEGDVG 158

Query: 153 FFRGIFKSFSMSKVRKMLIERGAELHPTEVCPYCKAKLWSMLQAKMIPPSASCRLGAYED 212
            FRGIFKSF  SKVRK++I +    HP+EVCPYCKAKLWSMLQAK+IP SA  RL AYED
Sbjct: 159 LFRGIFKSFPTSKVRKVIINKAVPFHPSEVCPYCKAKLWSMLQAKIIPQSACIRLEAYED 218

Query: 213 CIDYYVCLNGHMVGICTLLPLSDSEE 238
           CI+Y+VCLNGH++GICTL PLSDSE+
Sbjct: 219 CIEYFVCLNGHLLGICTLAPLSDSED 244

[Close]

BLAST of Cp4.1LG02g12140 vs. TAIR 10
Match: AT3G63060.1 (EID1-like 3 )

HSP 1 Score: 196.8 bits (499), Expect = 2.0e-50
Identity = 90/205 (43.90%), Postives = 127/205 (61.95%), Query Frame = 0


Query: 35  IATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSG-SHSVDGNWRALGKLLIFCSG 94
           + T++   + F  +A+R+LW+  C  RAP M+  L     S  +DG W AL KL+ FC G
Sbjct: 54  LCTIASLSRRFCAIARRILWRRLCVNRAPGMVAALSGEDPSGRIDGGWHALAKLMFFCGG 113

Query: 95  CKKGGLFNNIQ-IPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGF 154
            +    FN  Q   GHF   +RFS+TSG+ FL   CR D+LY+SDPCEH   G +  +G 
Sbjct: 114 GESTRYFNLSQPTSGHFACESRFSKTSGRFFLPKNCRRDLLYMSDPCEHQAVGGDEHLGV 173

Query: 155 FRGIFKSFSMSKVRKMLIERGAELHPTEVCPYCKAKLWSMLQAKMIPPSASCRLGAYEDC 214
           FRG+F+ F  SK R+ L+ R A L     CPYC  ++WSM  A+++P SA+ RLG+ E  
Sbjct: 174 FRGVFREFMRSKTRECLVRRQAALEEKVRCPYCGGRVWSMTAARLVPKSAARRLGSREGG 233

Query: 215 IDYYVCLNGHMVGICTLLPLSDSEE 238
           ++++VC+NGH+ G C L+PLS  EE
Sbjct: 234 LEFFVCVNGHLHGTCWLIPLSSEEE 258

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g12140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLZ8	2.9e-107	84.29	EID1-like F-box protein 2 OS=Arabidopsis thaliana OX=3702 GN=EDL2 PE=1 SV=1	[more]
Q9LF38	7.0e-101	78.64	EID1-like F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EDL1 PE=2 SV=1	[more]
Q93ZT5	2.8e-49	43.90	EID1-like F-box protein 3 OS=Arabidopsis thaliana OX=3702 GN=EDL3 PE=2 SV=1	[more]

BLAST of Cp4.1LG02g12140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949321.1	1.43e-157	99.52	EID1-like F-box protein 2 [Cucurbita moschata] >XP_022949322.1 EID1-like F-box p...	[more]
XP_022997892.1	2.58e-155	99.04	EID1-like F-box protein 2 [Cucurbita maxima] >XP_022997893.1 EID1-like F-box pro...	[more]
XP_038877395.1	7.93e-155	97.62	EID1-like F-box protein 2 [Benincasa hispida]	[more]
XP_004149843.1	7.93e-155	97.62	EID1-like F-box protein 2 [Cucumis sativus] >XP_008450153.1 PREDICTED: EID1-like...	[more]
XP_022144516.1	3.23e-154	96.67	EID1-like F-box protein 2 [Momordica charantia]	[more]

BLAST of Cp4.1LG02g12140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GBQ5	6.94e-158	99.52	EID1-like F-box protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111452709 PE=4 SV=...	[more]
A0A6J1KCU0	1.25e-155	99.04	EID1-like F-box protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111492711 PE=4 SV=1	[more]
A0A1S3BP99	3.84e-155	97.62	EID1-like F-box protein 2 OS=Cucumis melo OX=3656 GN=LOC103491829 PE=4 SV=1	[more]
A0A5A7UYZ3	3.84e-155	97.62	EID1-like F-box protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A0A0L849	3.84e-155	97.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G516490 PE=4 SV=1	[more]

BLAST of Cp4.1LG02g12140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39360.1	2.1e-108	84.29	EID1-like 2	[more]
AT5G15440.1	4.9e-102	78.64	EID1-like 1	[more]
AT3G63060.1	2.0e-50	43.90	EID1-like 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31348:SF13	EID1-LIKE F-BOX PROTEIN 1	coord: 32..242
IPR040267	F-box protein EID1-like	PANTHER	PTHR31348	EID1-LIKE F-BOX PROTEIN 2-RELATED	coord: 32..242

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g12140.1	Cp4.1LG02g12140.1	mRNA