Cp4.1LG02g11970 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g11970
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Ran-binding protein 1
Location	Cp4.1LG02: 10810101 .. 10817371 (+)
RNA-Seq Expression	Cp4.1LG02g11970
Synteny	Cp4.1LG02g11970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAGTTCCGATACCGAACGCAGAGATGATGAGGACGCTCCGGCCGCAGAGGATGAAGACACTGGAGCTCAAGTCGCCCCAATCGTCAAGTTGGAAGCGGTAGCCGTCACTACTGGTGAAGAAAACGAGGACGTTATTCTTGATCTGTATGCCATTTGCCATTTACTTATTTATCTGATCTCCTCAATCTAGGTTTTGGATTTTATGGTTTAATCGTATTTGTTGCTTTAGAAAGTCCAAACTCTACCGATTTGATAAAGAAGGAAACCAATGGAAGGAGAGAGGTGCTGGTACTGTTAAGTTTTTGAAACACAAGGAGACTGGCAAGGTTCGTCTTGTTATGAGGCAGTCTAAGACCCTCAAGATCTGCGCTAACCATCTTGGTTCGATCTTAACTCTCTACCTCGTATATCAAACTCCTTTGAGTTCTTGTTCTTTTTGTTGCTTTCTTGATTTAGATTTAGTTCTTGTATTTTATCGTTTGATTTGTCGTGATTGTAGTTCTTCCATCAATGTCGGTTCAAGAACACGCTGGTAATGATAAGTCTTGTGTGTGGCATGCGCCTGACTATGCGGATGGTGAATTGAAAGATGAGCTGTTTTGCATCAGATTCCCATATATTGAGAGTGAGTTCAACTCCGTAAATTTTTTTTTCTCCAAGTCTTGTTTGTAGGTTGACTTTTGATATATATATATATTGATATTTAGTAGTGGGCGGTATTAGTATCAAAGATGATTCTTATATCATTTCACTTTTTTGTCTTTTTCTCCACTCTCTGTGAAGTACTCTGTTGGGGCGGTCTACTTGTGTCTGGTTTTTTAATTCAACTCAAAATTGTCTGAGTATCACTAGTATAGTTGTTTCTGTTTTGGTTTGTACAGTTTGTCATCATAAGATATTATAGAACAATGGACTATCACGGTATGTGTGAGATCCCACATCAATTGGAGAGAGGAACGAGTGCCAGTGAGTATCCTGGGTCACAAGGGGGGTGGGGGGTGTGGATTGTGAGATCTCATATCGATTTAAGAGGGGAACAAGTGCTAGTGTGGACGCTAGGCCCTGAAGGGGGGTGGATTGTGAGATTCCACGTCGATTGGAGAGGAGAATGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGATGCATTTCAAAAACCTTGTGGGGAAGCTCGAAAGGAAAACCCAAAAAGGACAATATCTGTTAGCGGTGGCTTGGGCTTAAGCTTAGGCTTAGGCTGCTACAATATGGTTTTAAGATTTTAAGATTTTAAGATGAATGTTCTCCTGGCAGTACATGTTAATATTTGATTCTGTTAAAGGTTAGAACATGAATTTGTTCTTAAAAGCCACACTATTGTTCTAATACGTTCATAATGGTAACTTATCCATGAAACTTTTACTGGTCTGCTTATTATTACTGATTATTGACTCTAACTAAGACTTCTTTTTTCCATTTTCATTAACATTTGTTTTTTTTTTTCTATTAAAAGATGGGAAGTTCTTTATCCATAAGTCTTCTCTGTTATTCTACATAGTTTCTTCAGTTATATAATTCAGATAAATTTGATCAGCTGCGGTGGTAGTGGCAGAGTCAGAGGTTGGTGGCTGAAAAGAGGAAGAATAGTATAGAATTTCAGTTATACTTAATGAGGGTTTACAAATAAAGTTTGATAGAAAAGTAGGTGAAAAGGTGTGCGGCTTCATTGGGGAATAGACAGAAAAAAGAGGAAGTGGATTCAGTTATAATTTTATTTTAGAGGCTTTTAGTAATGAGACGTAATAGAACGGTTGAAGAGATGAATGGTACAGATAGAAATTTCCTAGGTCATAATTATCAGTGCTTTTTGTTGGTGTATACTGGGTACATCGGATATGGTAGGGGTCTTCCTTACATGCAGTGGTATGGTAGCTAAGATGGTTAGAATTTTGTTAGATAAACTTAAGATAAATTAATGTTACTGGGTTGCTCGCGTTAATTTGTATGACTGGTTTATATTATTACTCAGTTACTGTTCATCATAAGCTTTCCATTGTGTTTTGAATGAATATCAGTTCAAATTTATCAAGGAATTAGGCATCCTAACTCTATAAGATAGGAAACCCTGGATAAAAATTAAGGTTTCTTTCGTTTCTTTTCTTCTCTGTTCTTGTCCTTGGATGGTGAGCAATGAAGTCCATTGTACTAATTTAAGCAGCTTCTCTGCCATGGCTTCATCCAATGAAACAACAAAGGATATTGGATCTTAGTTTGTGGCTCATATTTGACGTGAAGCATGGGGACAAGCATGATGTCAGCTTTGATTTACAACATCACTAAATGAAGCACTTGGCAATTCTTAGTGCTTTGACATGACCATGCTTGTGTTCCTTGCCCAACATAGATAGAGCTCTTATAGAATGTTTATCTCATCCTTTTAGTACTTCATTAAGATAGTTTATTGAATTGTTGTGTGTATTATCAGACTGCAAAACCTTCATGGAGACATTCCAAGAAGTTGCAGAGTCCCAAACCAAGAAAGAGGAGAATGAAGATGCATCTGCAGCAGCTGATCAACTTGAAAAATTAAAGGTTGAAGACAAAAAGAAGGAAGGTGAAGATAAAGCGGGAGACAAAGCTGAAGATAAAGCTGCAGAGAAAGAGTAATTAGGAGGCTGTTTCCCCTGTGTGAGATACTAGAAGAAGAAGAAGATACACAATACCCTAAGAAAAAGATGGAAGAGGTTTTGTTGAGTTATGATGCCCTTGCTTAATTATCTAATGATATCAAGTTTTGGGCTTCTGACTTACATTTGCATTATTACTATTTAAGTTTTTTTCTTTCTTAAAAAAATAATGTCTGTGTTTTGTTCTTCTCGTGCGACCATAGTTCAACTGTCATAAAACATATGTTATGTGTTATCTTTGATGAAGAGGTTAGCATCGAGACATAGCTTCATACTCATATTTTTAGGAAACATGGTGTTTACTTCCTAAGAGCAAACTCAATCAAATCCTCATTACAAAGGTCACTCTTAAAGTAATATAGACATTTGCTTTGAATTTTGTTTTATATATATATACACACACATATATATATCTATACACACACACACATATATATATTTTGTATTATACACACACATATATATAGATATATCTATACACGTATATATATGCATATATACATACACACATATATACATATATACATACACACACATATATACATATATATATATATATACACACACACATATATATATACATACACACACACACATATATATATACATACACACACACATATATATATTTTGTATTTTTTATTTTTCTCTCACATAAATTTGATTATTTGTACAANTTTTTATTTTTTATTTTTCTCTCACATAAATTTGATTATTTGTACAATATTTAATATTAAAATATTTATTTTTGTATACATAAAAGCATTAAAAAAAAGAGATTAAAATACTATTATTTTAGATTTTATTTCATTTTATTCGGTTTACCGTTAGCTCAAAGCTAATTTTTGTGAAATTAATTAAATAACAATGATGGGTAAAATGTGAAGATGAAGGCTAATAAATAAAAATTTCATAGAAATATAAGAAAAAAAAAATTTTAAAAAGTAAAAATGCATCCAATATAAAACTTTATTTTTATAATTTGAATATTTATTACTAATAATTCAACAACATTGAAATTATATTGTAAATAGTTGAAATTATTATTACAGAATTAATAATTGAAATTATATTTTTTAATTACGTTTTTGTGATATTTTATTTATTTAAAAAAGTAAAAATGCATCCAATATAAAACTTCATTCTCATTCTCGCTCATTTTATTTCCTCAATATAAAAACCCTAATTTCCACTCCTGCTCTTCCATTGCTTTCCTCCAAATTCCGATCCATTTCTGCATCATCAAACCTTCATTTATGGCGAGCACAGATCCCGAACGCCGAGAGGACGAGGATGCTCCTGCTGGAGACGATGAAGACACTGGAGCTCAAGTTGCCCCGATCGTCAAGTTGGAGGAGGTTGCTGTCACCACCGGTGAAGAAGATGAGGACGCCATTCTCGATCTGTACGATTTTCTCTATACTTTTTTCTCTGCATCTTGTTTTTCTCAATCTAGGCTTTGAGTCGTGAGTGTGATTTGTTTTTGTGCGGATTATTCATGATTATTTTAGGAAGGCAAAACTGTACCGATTCGATAAGGATGGAAACCAATGGAAGGAGAGAGGTGCTGGTACTGTCAAGTTTTTGAAACATAAGAATACTGGCAAGGTTCGCCTTGTTATGAGACAGTCTAAGACGCTTAAGATCTGCGCTAATCATCTTGGTTTGTTCTTGATTATTCACTCATTATTTGCGTACAATTGAGTACCCTTGAGTTCTTTTGTTTATGGTTTGATTGTTGTGCTTTTGTAGTGATTTCGTCAATGACGGTTCAAGAACACGCTGGAAATGAGAAATCATGCGTGTGGCATGCCGCTGACTTTGCTGATGGCGAATTGAAAAATGAGCTTTTCTGTATTAGATTCCCATCAATTGAGAGTGAGTACAACTTCGTTATTCTTTTTCCCTGGAATTCGGCTGTAGGGTGAACTTGGCTGATGGGTTTTTTTGATCCTTTTGATCTATGATAGCGTTGGTAATATCAAAAGACCATAGATGTTCTTTCAGCCCAGAAATTTTGGTCATTTCTTTCTCCGTAAATATCTGCTAAATTAGATCAAGTACTAGCACCAGTCTATTCACCGATAGAGTCGTTCCTTTTGTGCACCCAAATGGCTTCATAGGATTTATGATCTGTAGTAAGATTCGATCATTTTCGTTGGATAATTTTGTCAGTAGGACTTACTTTTTTTTACTGCATCAAAAAGAAGTGGTGAATGAGATTCCCCTAATAAGATTTTATTTTAAAAAAATGGGGGAAAAGGAGAGTGGTTTTACTGGCGAATAGAGAAAATTTTGGCGGTGGCAAAGTAGGGGAGAAGTGGGGAAAGGGGCGGATGAACTGAAAATTTATTTTAGGGCATATAAAGAAAAAAAATTTAGATGTGATCGACTACCTTGCATAAGACGTACTTATAAATCTGGTTTCATTTGGATGTCCATAATTCTATTGTCTTTAACTGTTTTAGACCAAGTAAAGAAGTTCATTACATGATAAAACAAGTTTTCTTACATCTAATTCGATTGCCTTGGATTTATTATTCCAAACCCTTTCTCTCCTGTTGCAGGGATGATCCTTTTCCATTCGTTATAATCTTTTGTTGTTGTGTCTTCAATGCATGTCTGTCCGTCAAATTTACCTAGGAATTAGGTTATTTATCATTTCCTCAATAGGTATGAGCCTTGGATAAATGATAATCAAGGTTGTTTTCTTTTTCGTTTCTCTTTTCGGGGTGGTGTGTTAGAACTCCTTTGAATTTTTTGATGCATCTACTTTGTCATCACTTGGTCTGATGTTCACTAGGAAATCAATTTTTGTTTAACCTGTGCTTTCTAGACTAACTCAGTTAAATCTCTTAAGGTAACCTTTCATTCATTTGTGTTTTTCGTAATCACTATATTATTAATCAACAAGAATTTGTTTCTGCTGATAAATTCTTTTAGTTTTAGTTTCTTAAGTTTTATAATTATTTTCTTACTCTATTTCATATTATTAAACATTCTACTTATAAAGTGTGGAGACAGGCATGTTTGCTTGGCGCCTGAGATTGTAGAGATTCTCAATTGCATTTTTTTTTTTAAACTAATTTTTATCTCTTTTCTCAACTTCTAGGGTCGTTTACTCAATTTTTTTCCCTTTTTCTGATTTAGGCATTCATTTTTATCATTTCTTGATTTTTGTTATTTCCTTTATTCCTCCCAAACTGTTCGGTGCATCTTTGGAGTGTGTCTAGGTATTAAAAATGTAACAATTCCTGCACTTATGTGTGTATATACTTGATTGAACAAGATTTCTAGAGCATTGTTTTGTGAATGTTCATCCTTTCATTTTTGTTCAATCGTAAGATAAATATTTTTCCCTGCTGACAAGTATCCTCTTTGCTTCAGACTGCAAAACATTCAAGGAAACATTCCAAGAAATTGCCGAGTCCCAACAGAAGAAAGATGAAAATAAAGATGCATCAGCAGCAGCTGGATTACTTGAGAAATTGAGTGTTGAAGAAAAGAAAGGTGAAGAAGATAAAGCTGGAGACACACCTGCCAAAACCAAGGAAGAGGATGAACCCAAGGGTGAGGCAGAAAAGAAAGCAGATGCAGAGAAGAAGAATGATGAGTAGCCTGATTTGGTAGTGAATACATTTGAGATTTTGATGAGGTTGACCTCTCTTCCATCCTTGGTACATTTAAGCATAATAGTCAGTTATTGGATTGGATTTCCTCTGGGGTGGGAGAGGTCGTCTACATGGAACTTTTGGTTGGGAGTCCCTTTCCATTTTTCTTTCTTCCTTAAAAAATGAGAGTTTTCTAGTCACTGTGGTCGTCAAAAGTCGGGGTGGGGTGGGGTTGTGTGTCGTCTTGTGGTTTGTGAAACTTGAAAGTTCAGGAATTGTTTGATTGAGGGGTGGTGGGTGATAATACACTATGGAGTTTGTGTGCAGCAGCGCAGGGCCTGAGCTGAAGATGCATACTGCAAGGAACAGACATGTACACATTTATTTTTGTTTGATGATTTGCTCAGTCCCGGAGATTTTTACCTTTGGGGATGATGAAAAAATTATGATTGTCTTGTCTTTGTCTTCGTCTTGTGGAATTTTAGGAATTTTTATTTAAAGGTTTTTAGGTGTTTTGTTGTGCAGTGTGTTTCTGTTTCTGTTTTTGCTCACTTCCCATTGTAGTTGTTCCCTACCTATATTAGTTATTTTGAAGTAATTATGTATCCATTTTGAAACTAAACATCTCTTTTATGGCTTGGAGTTAGGTTTATTGTCTTCTCTTTGTTTATTTAGTCTGTATTTCTCTAATTTTATTTCAATAAATGAAAATTCTGGCATATATGTGATGTGGAAACATGTCTTTGTCTGTGGAAGATCGTCTACGAAGAGGACATCATATCTGCAAATACTTGGGTAAGGAAGAAGTTGCAGGTCGGGTTGGATCAGGTCTTCAAACTCTAGACCCAACCTCCAGCAAACGCCACAACCCATTAGCCGACCAAGCCCACGAGCTCTAGCAGCCTCAAGCCCACGAGCTCTAGCAGCCTCAAGCCCACGAGTGCGCATCCAACAACCACCCACCTGACACAAGACCAGATC

mRNA sequence

ATGGCGAATGATGAGGACGCTCCGGCCGCAGAGGATGAAGACACTGGAGCTCAAGTCGCCCCAATCGTCAAGTTGGAAGCGGTAGCCGTCACTACTGGTGAAGAAAACGAGGACGTTATTCTTGATCTAAAGTCCAAACTCTACCGATTTGATAAAGAAGGAAACCAATGGAAGGAGAGAGGTGCTGGTACTGTTAAGTTTTTGAAACACAAGGAGACTGGCAAGGTTCGTCTTGTTATGAGGCAGTCTAAGACCCTCAAGATCTGCGCTAACCATCTTGTTCTTCCATCAATGTCGGTTCAAGAACACGCTGGTAATGATAAGTCTTGTGTGTGGCATGCGCCTGACTATGCGGATGGTGAATTGAAAGATGAGCTGTTTTGCATCAGATTCCCATATATTGAGAACTGCAAAACCTTCATGGAGACATTCCAAGAAGTTGCAGAGTCCCAAACCAAGAAAGAGGAGAATGAAGATGCATCTGCAGCAGCTGATCAACTTGAAAAATTAAAGGTTGAAGACAAAAAGAAGGAAGGTGAAGATAAAGCGGGAGACAAAGCTGAAGATAAAGCTGCAGAGAAAGACACAGATCCCGAACGCCGAGAGGACGAGGATGCTCCTGCTGGAGACGATGAAGACACTGGAGCTCAAGTTGCCCCGATCGTCAAGTTGGAGGAGGTTGCTGTCACCACCGGTGAAGAAGATGAGGACGCCATTCTCGATCTGAAGGCAAAACTGTACCGATTCGATAAGGATGGAAACCAATGGAAGGAGAGAGGTGCTGGTACTGTCAAGTTTTTGAAACATAAGAATACTGGCAAGGTTCGCCTTGTTATGAGACAGTCTAAGACGCTTAAGATCTGCGCTAATCATCTTGTGATTTCGTCAATGACGGTTCAAGAACACGCTGGAAATGAGAAATCATGCGTGTGGCATGCCGCTGACTTTGCTGATGGCGAATTGAAAAATGAGCTTTTCTGTATTAGATTCCCATCAATTGAGAACTGCAAAACATTCAAGGAAACATTCCAAGAAATTGCCGAGTCCCAACAGAAGAAAGATGAAAATAAAGATGCATCAGCAGCAGCTGGATTACTTGAGAAATTGAGTGTTGAAGAAAAGAAAGGTGAAGAAGATAAAGCTGGAGACACACCTGCCAAAACCAAGGAAGAGGATGAACCCAAGGGTGAGGCAGAAAAGAAAGCAGATGCAGAGAAGAAGAATGATGAGTAGCCTGATTTGGTAGTGAATACATTTGAGATTTTGATGAGGTTGACCTCTCTTCCATCCTTGGTACATTTAAGCATAATAGTCAGTTATTGGATTGGATTTCCTCTGGGGTGGGAGAGGTCGTCTACATGGAACTTTTGGTTGGGAGTCCCTTTCCATTTTTCTTTCTTCCTTAAAAAATGAGAGTTTTCTAGTCACTGTGGTCGTCAAAAGTCGGGGTGGGGTGGGGTTGTGTGTCGTCTTGTGGTTTGTGAAACTTGAAAGTTCAGGAATTGTTTGATTGAGGGGTGGTGGGTGATAATACACTATGGAGTTTGTGTGCAGCAGCGCAGGGCCTGAGCTGAAGATGCATACTGCAAGGAACAGACATGTACACATTTATTTTTGTTTGATGATTTGCTCAGTCCCGGAGATTTTTACCTTTGGGGATGATGAAAAAATTATGATTGTCTTGTCTTTGTCTTCGTCTTGTGGAATTTTAGGAATTTTTATTTAAAGGTTTTTAGGTGTTTTGTTGTGCAGTGTGTTTCTGTTTCTGTTTTTGCTCACTTCCCATTGTAGTTGTTCCCTACCTATATTAGTTATTTTGAAGTAATTATGTATCCATTTTGAAACTAAACATCTCTTTTATGGCTTGGAGTTAGGTTTATTGTCTTCTCTTTGTTTATTTAGTCTGTATTTCTCTAATTTTATTTCAATAAATGAAAATTCTGGCATATATGTGATGTGGAAACATGTCTTTGTCTGTGGAAGATCGTCTACGAAGAGGACATCATATCTGCAAATACTTGGGTAAGGAAGAAGTTGCAGGTCGGGTTGGATCAGGTCTTCAAACTCTAGACCCAACCTCCAGCAAACGCCACAACCCATTAGCCGACCAAGCCCACGAGCTCTAGCAGCCTCAAGCCCACGAGCTCTAGCAGCCTCAAGCCCACGAGTGCGCATCCAACAACCACCCACCTGACACAAGACCAGATC

Coding sequence (CDS)

ATGGCGAATGATGAGGACGCTCCGGCCGCAGAGGATGAAGACACTGGAGCTCAAGTCGCCCCAATCGTCAAGTTGGAAGCGGTAGCCGTCACTACTGGTGAAGAAAACGAGGACGTTATTCTTGATCTAAAGTCCAAACTCTACCGATTTGATAAAGAAGGAAACCAATGGAAGGAGAGAGGTGCTGGTACTGTTAAGTTTTTGAAACACAAGGAGACTGGCAAGGTTCGTCTTGTTATGAGGCAGTCTAAGACCCTCAAGATCTGCGCTAACCATCTTGTTCTTCCATCAATGTCGGTTCAAGAACACGCTGGTAATGATAAGTCTTGTGTGTGGCATGCGCCTGACTATGCGGATGGTGAATTGAAAGATGAGCTGTTTTGCATCAGATTCCCATATATTGAGAACTGCAAAACCTTCATGGAGACATTCCAAGAAGTTGCAGAGTCCCAAACCAAGAAAGAGGAGAATGAAGATGCATCTGCAGCAGCTGATCAACTTGAAAAATTAAAGGTTGAAGACAAAAAGAAGGAAGGTGAAGATAAAGCGGGAGACAAAGCTGAAGATAAAGCTGCAGAGAAAGACACAGATCCCGAACGCCGAGAGGACGAGGATGCTCCTGCTGGAGACGATGAAGACACTGGAGCTCAAGTTGCCCCGATCGTCAAGTTGGAGGAGGTTGCTGTCACCACCGGTGAAGAAGATGAGGACGCCATTCTCGATCTGAAGGCAAAACTGTACCGATTCGATAAGGATGGAAACCAATGGAAGGAGAGAGGTGCTGGTACTGTCAAGTTTTTGAAACATAAGAATACTGGCAAGGTTCGCCTTGTTATGAGACAGTCTAAGACGCTTAAGATCTGCGCTAATCATCTTGTGATTTCGTCAATGACGGTTCAAGAACACGCTGGAAATGAGAAATCATGCGTGTGGCATGCCGCTGACTTTGCTGATGGCGAATTGAAAAATGAGCTTTTCTGTATTAGATTCCCATCAATTGAGAACTGCAAAACATTCAAGGAAACATTCCAAGAAATTGCCGAGTCCCAACAGAAGAAAGATGAAAATAAAGATGCATCAGCAGCAGCTGGATTACTTGAGAAATTGAGTGTTGAAGAAAAGAAAGGTGAAGAAGATAAAGCTGGAGACACACCTGCCAAAACCAAGGAAGAGGATGAACCCAAGGGTGAGGCAGAAAAGAAAGCAGATGCAGAGAAGAAGAATGATGAGTAG

Protein sequence

MANDEDAPAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVILDLKSKLYRFDKEGNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWHAPDYADGELKDELFCIRFPYIENCKTFMETFQEVAESQTKKEENEDASAAADQLEKLKVEDKKKEGEDKAGDKAEDKAAEKDTDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAADFADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEKKGEEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE

Homology

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BLAST of Cp4.1LG02g11970 vs. ExPASy Swiss-Prot
Match: Q9LMK7 (Ran-binding protein 1 homolog a OS=Arabidopsis thaliana OX=3702 GN=RANBP1A PE=1 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 3.5e-76
Identity = 159/223 (71.30%), Postives = 188/223 (84.30%), Query Frame = 0


Query: 192 AEKDTDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDK 251
           A  + + E R++E+A A +DEDTGAQVAPIV+LEEVAVTTGEEDEDA+LDLK+KLYRFDK
Sbjct: 2   ATNEPEHEHRDEEEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFDK 61

Query: 252 DGNQWKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVW 311
           D NQWKERGAGTVKFLKHKNTGK+RLVMRQSKTLKICANH V S M+VQEH GNEKSCVW
Sbjct: 62  DANQWKERGAGTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCVW 121

Query: 312 HAADFADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSV 371
           HA DFADGELK+ELFCIRF SIENCKTF + F+E+AES+++K+E+KDA+  AGLLEKL+V
Sbjct: 122 HARDFADGELKDELFCIRFASIENCKTFMQKFKEVAESEEEKEESKDAADTAGLLEKLTV 181

Query: 372 EEKKGEED---KAGDTPAKT--KEEDEPKGEAEKKADAEKKND 410
           EE K EE    KA +T AKT  K E++ + EAEK  +A+K  +
Sbjct: 182 EETKTEEKTEAKAVET-AKTEVKAEEKKESEAEKSGEAKKTEE 223

[Close]

BLAST of Cp4.1LG02g11970 vs. ExPASy Swiss-Prot
Match: Q8RWG8 (Ran-binding protein 1 homolog b OS=Arabidopsis thaliana OX=3702 GN=RANBP1B PE=1 SV=2)

HSP 1 Score: 272.3 bits (695), Expect = 8.8e-72
Identity = 147/216 (68.06%), Postives = 178/216 (82.41%), Query Frame = 0


Query: 192 AEKDTDPER--REDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRF 251
           A    +PER  R++E+  A +DEDTGAQVAPIV+LEEVAVTTGEEDED ILDLK+KLYRF
Sbjct: 2   ASISNEPERENRDEEETGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRF 61

Query: 252 DKDGNQWKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSC 311
           DKDG+QWKERGAGTVKFLKH+ +GK+RLVMRQSKTLKICANHLV S M+VQEHAGN+KSC
Sbjct: 62  DKDGSQWKERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSC 121

Query: 312 VWHAADFADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKL 371
           VWHA DF+DGELK+ELFCIRF S+ENCK F + F+E+AES+++K+E+KDAS  AGLLEKL
Sbjct: 122 VWHARDFSDGELKDELFCIRFASVENCKAFMQKFKEVAESEEEKEESKDASDTAGLLEKL 181

Query: 372 SVEEKKGEEDKAGDTPAKTKEEDEPKGEAEKKADAE 406
           +VEEK+ E+      P +  EE++     E+K   E
Sbjct: 182 TVEEKESEK-----KPVEKAEENKKSEAVEEKKTEE 212

[Close]

BLAST of Cp4.1LG02g11970 vs. ExPASy Swiss-Prot
Match: P92985 (Ran-binding protein 1 homolog c OS=Arabidopsis thaliana OX=3702 GN=RANBP1C PE=2 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 3.7e-70
Identity = 151/216 (69.91%), Postives = 169/216 (78.24%), Query Frame = 0


Query: 196 TDPERREDED-APAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGN 255
           T+PER   ED     +DEDTGAQVAPIV+LEEVAVTTGEEDEDA+LDLK+K+YRFDK+GN
Sbjct: 4   TEPERENREDETEVNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDKEGN 63

Query: 256 QWKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAA 315
           QWKERGAGTVK LKHK TGKVRLVMRQSKTLKICANHL+ S M+VQEH+GNEKSC+WHA 
Sbjct: 64  QWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLWHAT 123

Query: 316 DFADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEK 375
           DF+DGELK+ELFCIRF SIENCKTF E F EIAESQQ   E+     AAGL+E LSVEE 
Sbjct: 124 DFSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQVGKESTQGDEAAGLIENLSVEEN 183

Query: 376 KGEEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE 411
             EE       AK  EE EP  E +K+   EK  +E
Sbjct: 184 ISEE------KAKEAEEKEPAKE-DKETKKEKVEEE 212

[Close]

BLAST of Cp4.1LG02g11970 vs. ExPASy Swiss-Prot
Match: Q9ERU9 (E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2)

HSP 1 Score: 185.7 bits (470), Expect = 1.1e-45
Identity = 139/451 (30.82%), Postives = 213/451 (47.23%), Query Frame = 0


Query: 1    MANDEDAPAAEDEDTGAQVAPIVKL-EAVAVTTGEENEDVILDLKSKLYRFDKEGNQWKE 60
            +  D+DA   ED D      P+V++ E V + TGEE+E V+   + KL+RFD E +QWKE
Sbjct: 1833 LEKDDDAYKTEDSD-DIHFEPVVQMPEKVELVTGEEDEKVLYSQRVKLFRFDAEISQWKE 1892

Query: 61   RGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWHAPDYAD 120
            RG G +K LK++  GK+R++MR+ + LK+CANH +  +M+++  +G+D++ +W A D++D
Sbjct: 1893 RGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSD 1952

Query: 121  GELKDELFCIRFPYIENCKTFMETFQE--------------------------------- 180
            G+ K E    +F   E  + F + F+E                                 
Sbjct: 1953 GDAKLEQLAAKFKTPELAEEFKQKFEECQRLLLDIPLQTPHKLVDTGRAAKLIQRAEEMK 2012

Query: 181  ---------VAESQTKKEENEDASAAAD-------------------------QLEKLKV 240
                     +   Q K  + E+AS+ AD                          L +  +
Sbjct: 2013 SGLKDFKTFLTNDQVKVTDEENASSGADAPSASDTTAKQNPDNTGPALEWDNYDLREDAL 2072

Query: 241  EDKKKE--------------------GEDKAGDKAEDKAA-EKDTDPERREDEDAPAGDD 300
            +D                        GE   G     K+A      P +     A  G D
Sbjct: 2073 DDSVSSSSVHASPLASSPVRKNLFRFGESTTGFNFSFKSALSPSKSPAKLNQSGASVGTD 2132

Query: 301  EDT---------GAQVAPIVKLEE-VAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGA 353
            E++         G    P+V L + V V++GEE+E  +   +AKLYR+DKD  QWKERG 
Sbjct: 2133 EESDVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAKLYRYDKDVGQWKERGI 2192

[Close]

BLAST of Cp4.1LG02g11970 vs. ExPASy Swiss-Prot
Match: P49792 (E3 SUMO-protein ligase RanBP2 OS=Homo sapiens OX=9606 GN=RANBP2 PE=1 SV=2)

HSP 1 Score: 182.2 bits (461), Expect = 1.2e-44
Identity = 136/448 (30.36%), Postives = 215/448 (47.99%), Query Frame = 0


Query: 4    DEDAPAAEDEDTGAQVAPIVKL-EAVAVTTGEENEDVILDLKSKLYRFDKEGNQWKERGA 63
            D+DA   ED D      P+V++ E V + TGEE+E V+   + KL+RFD E +QWKERG 
Sbjct: 1999 DDDAYKTEDSD-DIHFEPVVQMPEKVELVTGEEDEKVLYSQRVKLFRFDAEVSQWKERGL 2058

Query: 64   GTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWHAPDYADGEL 123
            G +K LK++  GK+R++MR+ + LK+CANH +  +M+++  +G+D++ +W A D++DG+ 
Sbjct: 2059 GNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDA 2118

Query: 124  KDELFCIRFPYIENCKTFMETFQE------------------------------------ 183
            K E    +F   E  + F + F+E                                    
Sbjct: 2119 KLEQLAAKFKTPELAEEFKQKFEECQRLLLDIPLQTPHKLVDTGRAAKLIQRAEEMKSGL 2178

Query: 184  ------VAESQTKKEENED------ASAAADQLEKLKVE-----------DKKKEGEDKA 243
                  +   QTK  E E+      A+ A+D   K   E           D +++  D +
Sbjct: 2179 KDFKTFLTNDQTKVTEEENKGSGTGAAGASDTTIKPNPENTGPTLEWDNYDLREDALDDS 2238

Query: 244  GDKAEDKAAEKDTDPERR--------------------------------------EDED 303
               +   A+   + P R+                                      ++E 
Sbjct: 2239 VSSSSVHASPLASSPVRKNLFRFGESTTGFNFSFKSALSPSKSPAKLNQSGTSVGTDEES 2298

Query: 304  APAGDDEDTGAQVAPIVKLEE-VAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTV 353
                ++E  G    P+V L + V V++GEE+E  +   +AKLYR+DKD  QWKERG G +
Sbjct: 2299 DVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAKLYRYDKDVGQWKERGIGDI 2358

[Close]

BLAST of Cp4.1LG02g11970 vs. NCBI nr
Match: KAG7036999.1 (Ran-binding protein 1-like c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 756 bits (1953), Expect = 2.08e-274
Identity = 403/409 (98.53%), Postives = 405/409 (99.02%), Query Frame = 0


Query: 4   DEDAPAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVILDLKSKLYRFDKEGNQWKERGAG 63
           DE+APAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVI+DLKSKLYRFDKEGNQWKERGAG
Sbjct: 11  DEEAPAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVIIDLKSKLYRFDKEGNQWKERGAG 70

Query: 64  TVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWHAPDYADGELK 123
           TVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWHAPDYADGELK
Sbjct: 71  TVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWHAPDYADGELK 130

Query: 124 DELFCIRFPYIENCKTFMETFQEVAESQTKKEENEDASAAADQLEKLKVEDKKKEGEDKA 183
           DELFCIRFP IENCKTFMETFQEVAESQTKKEENEDASAAADQLEKLKVEDKKKEGEDKA
Sbjct: 131 DELFCIRFPSIENCKTFMETFQEVAESQTKKEENEDASAAADQLEKLKVEDKKKEGEDKA 190

Query: 184 GDKAEDKAAEK--DTDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILD 243
            DKAEDKAAEK  DTDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILD
Sbjct: 191 EDKAEDKAAEKEKDTDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILD 250

Query: 244 LKAKLYRFDKDGNQWKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQE 303
           LKAKLYRFDKDGNQWKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQE
Sbjct: 251 LKAKLYRFDKDGNQWKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQE 310

Query: 304 HAGNEKSCVWHAADFADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASA 363
           HAGNEKSCVWHAADFADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASA
Sbjct: 311 HAGNEKSCVWHAADFADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASA 370

Query: 364 AAGLLEKLSVEEKKGEEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE 410
           AAGLLEKLSVEEKKGEEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE
Sbjct: 371 AAGLLEKLSVEEKKGEEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE 419

[Close]

BLAST of Cp4.1LG02g11970 vs. NCBI nr
Match: XP_022949353.1 (ran-binding protein 1 homolog a-like [Cucurbita moschata] >XP_023523176.1 ran-binding protein 1 homolog a-like [Cucurbita pepo subsp. pepo] >KAG6607321.1 Ran-binding protein 1-like c, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 407 bits (1045), Expect = 2.05e-139
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 196 TDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQ 255
           TDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQ
Sbjct: 4   TDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQ 63

Query: 256 WKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAAD 315
           WKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAAD
Sbjct: 64  WKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAAD 123

Query: 316 FADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEKK 375
           FADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEKK
Sbjct: 124 FADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEKK 183

Query: 376 GEEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE 410
           GEEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE
Sbjct: 184 GEEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE 218

[Close]

BLAST of Cp4.1LG02g11970 vs. NCBI nr
Match: XP_022998583.1 (ran-binding protein 1 homolog a-like [Cucurbita maxima])

HSP 1 Score: 404 bits (1037), Expect = 3.37e-138
Identity = 213/215 (99.07%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 196 TDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQ 255
           TDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQ
Sbjct: 4   TDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQ 63

Query: 256 WKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAAD 315
           WKERGAGTVKFLKHKN GKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAAD
Sbjct: 64  WKERGAGTVKFLKHKNNGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAAD 123

Query: 316 FADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEKK 375
           FADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEKK
Sbjct: 124 FADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEKK 183

Query: 376 GEEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE 410
           GEEDKAGDTPAKTKEEDEPKGEAEKK+DAEKKNDE
Sbjct: 184 GEEDKAGDTPAKTKEEDEPKGEAEKKSDAEKKNDE 218

[Close]

BLAST of Cp4.1LG02g11970 vs. NCBI nr
Match: XP_023523178.1 (ran-binding protein 1 homolog a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 367 bits (941), Expect = 7.21e-124
Identity = 191/192 (99.48%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 3   NDEDAPAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVILDLKSKLYRFDKEGNQWKERGA 62
           +DEDAPAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVILDLKSKLYRFDKEGNQWKERGA
Sbjct: 10  DDEDAPAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVILDLKSKLYRFDKEGNQWKERGA 69

Query: 63  GTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWHAPDYADGEL 122
           GTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWHAPDYADGEL
Sbjct: 70  GTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWHAPDYADGEL 129

Query: 123 KDELFCIRFPYIENCKTFMETFQEVAESQTKKEENEDASAAADQLEKLKVEDKKKEGEDK 182
           KDELFCIRFPYIENCKTFMETFQEVAESQTKKEENEDASAAADQLEKLKVEDKKKEGEDK
Sbjct: 130 KDELFCIRFPYIENCKTFMETFQEVAESQTKKEENEDASAAADQLEKLKVEDKKKEGEDK 189

Query: 183 AGDKAEDKAAEK 194
           AGDKAEDKAAEK
Sbjct: 190 AGDKAEDKAAEK 201

[Close]

BLAST of Cp4.1LG02g11970 vs. NCBI nr
Match: XP_022949354.1 (ran-binding protein 1 homolog b-like [Cucurbita moschata])

HSP 1 Score: 358 bits (919), Expect = 1.57e-120
Identity = 188/191 (98.43%), Postives = 189/191 (98.95%), Query Frame = 0


Query: 4   DEDAPAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVILDLKSKLYRFDKEGNQWKERGAG 63
           DE+APAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVILDLKSKLYRFDKEGNQWKERGAG
Sbjct: 11  DEEAPAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVILDLKSKLYRFDKEGNQWKERGAG 70

Query: 64  TVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWHAPDYADGELK 123
           TVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWHAPDYADGELK
Sbjct: 71  TVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWHAPDYADGELK 130

Query: 124 DELFCIRFPYIENCKTFMETFQEVAESQTKKEENEDASAAADQLEKLKVEDKKKEGEDKA 183
           DELFCIRFP IENCKTFMETFQEVAESQTKKEENEDASAAADQLEKLKVEDKKKEGEDKA
Sbjct: 131 DELFCIRFPSIENCKTFMETFQEVAESQTKKEENEDASAAADQLEKLKVEDKKKEGEDKA 190

Query: 184 GDKAEDKAAEK 194
            DKAEDKAAEK
Sbjct: 191 EDKAEDKAAEK 201

[Close]

BLAST of Cp4.1LG02g11970 vs. ExPASy TrEMBL
Match: A0A6J1GBT0 (ran-binding protein 1 homolog a-like OS=Cucurbita moschata OX=3662 GN=LOC111452731 PE=4 SV=1)

HSP 1 Score: 407 bits (1045), Expect = 9.94e-140
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 196 TDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQ 255
           TDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQ
Sbjct: 4   TDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQ 63

Query: 256 WKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAAD 315
           WKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAAD
Sbjct: 64  WKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAAD 123

Query: 316 FADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEKK 375
           FADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEKK
Sbjct: 124 FADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEKK 183

Query: 376 GEEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE 410
           GEEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE
Sbjct: 184 GEEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE 218

[Close]

BLAST of Cp4.1LG02g11970 vs. ExPASy TrEMBL
Match: A0A6J1KH56 (ran-binding protein 1 homolog a-like OS=Cucurbita maxima OX=3661 GN=LOC111493171 PE=4 SV=1)

HSP 1 Score: 404 bits (1037), Expect = 1.63e-138
Identity = 213/215 (99.07%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 196 TDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQ 255
           TDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQ
Sbjct: 4   TDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQ 63

Query: 256 WKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAAD 315
           WKERGAGTVKFLKHKN GKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAAD
Sbjct: 64  WKERGAGTVKFLKHKNNGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAAD 123

Query: 316 FADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEKK 375
           FADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEKK
Sbjct: 124 FADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEKK 183

Query: 376 GEEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE 410
           GEEDKAGDTPAKTKEEDEPKGEAEKK+DAEKKNDE
Sbjct: 184 GEEDKAGDTPAKTKEEDEPKGEAEKKSDAEKKNDE 218

[Close]

BLAST of Cp4.1LG02g11970 vs. ExPASy TrEMBL
Match: A0A6J1GCK9 (ran-binding protein 1 homolog b-like OS=Cucurbita moschata OX=3662 GN=LOC111452732 PE=4 SV=1)

HSP 1 Score: 358 bits (919), Expect = 7.61e-121
Identity = 188/191 (98.43%), Postives = 189/191 (98.95%), Query Frame = 0


Query: 4   DEDAPAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVILDLKSKLYRFDKEGNQWKERGAG 63
           DE+APAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVILDLKSKLYRFDKEGNQWKERGAG
Sbjct: 11  DEEAPAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVILDLKSKLYRFDKEGNQWKERGAG 70

Query: 64  TVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWHAPDYADGELK 123
           TVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWHAPDYADGELK
Sbjct: 71  TVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWHAPDYADGELK 130

Query: 124 DELFCIRFPYIENCKTFMETFQEVAESQTKKEENEDASAAADQLEKLKVEDKKKEGEDKA 183
           DELFCIRFP IENCKTFMETFQEVAESQTKKEENEDASAAADQLEKLKVEDKKKEGEDKA
Sbjct: 131 DELFCIRFPSIENCKTFMETFQEVAESQTKKEENEDASAAADQLEKLKVEDKKKEGEDKA 190

Query: 184 GDKAEDKAAEK 194
            DKAEDKAAEK
Sbjct: 191 EDKAEDKAAEK 201

[Close]

BLAST of Cp4.1LG02g11970 vs. ExPASy TrEMBL
Match: A0A6J1I618 (ran-binding protein 1 homolog a-like OS=Cucurbita maxima OX=3661 GN=LOC111469535 PE=4 SV=1)

HSP 1 Score: 356 bits (914), Expect = 7.42e-120
Identity = 188/214 (87.85%), Postives = 203/214 (94.86%), Query Frame = 0


Query: 197 DPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQW 256
           D ERR+ E+APAG+DEDTGAQVAPIVKLEEV VTTGEE+EDA+LDLKAKLYRFDKDGNQW
Sbjct: 5   DSERRDTEEAPAGEDEDTGAQVAPIVKLEEVVVTTGEENEDAVLDLKAKLYRFDKDGNQW 64

Query: 257 KERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAADF 316
           KERGAGTVKFLKHK TGKVRLVMRQSKTLKICANHLV+ SMTVQEHAGN+KSCVWHA DF
Sbjct: 65  KERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWHATDF 124

Query: 317 ADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEKKG 376
           ADGELK+ELFCIRFPSIENCK+F ETFQEIAESQQKK+ENKDAS+AAGLLEKLSVEEKKG
Sbjct: 125 ADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKEENKDASSAAGLLEKLSVEEKKG 184

Query: 377 EEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE 410
           E DKAG+TP+KTKEEDEPKG   +K+DAEKKNDE
Sbjct: 185 E-DKAGETPSKTKEEDEPKGGEAEKSDAEKKNDE 217

[Close]

BLAST of Cp4.1LG02g11970 vs. ExPASy TrEMBL
Match: A0A6J1KEQ3 (ran-binding protein 1 homolog b-like OS=Cucurbita maxima OX=3661 GN=LOC111493172 PE=4 SV=1)

HSP 1 Score: 352 bits (904), Expect = 1.44e-118
Identity = 185/191 (96.86%), Postives = 188/191 (98.43%), Query Frame = 0


Query: 4   DEDAPAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVILDLKSKLYRFDKEGNQWKERGAG 63
           DE+APAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVILDLKSKLYRFDKEGNQWKERGAG
Sbjct: 11  DEEAPAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVILDLKSKLYRFDKEGNQWKERGAG 70

Query: 64  TVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWHAPDYADGELK 123
           TVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWHAPDYADGELK
Sbjct: 71  TVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWHAPDYADGELK 130

Query: 124 DELFCIRFPYIENCKTFMETFQEVAESQTKKEENEDASAAADQLEKLKVEDKKKEGEDKA 183
           DELFCIRFP IENCKTFMETFQEVAESQTKKEENEDASAAAD LEKLKVE+KK+EGEDKA
Sbjct: 131 DELFCIRFPSIENCKTFMETFQEVAESQTKKEENEDASAAADLLEKLKVEEKKEEGEDKA 190

Query: 184 GDKAEDKAAEK 194
            DKAEDKAAEK
Sbjct: 191 EDKAEDKAAEK 201

[Close]

BLAST of Cp4.1LG02g11970 vs. TAIR 10
Match: AT1G07140.1 (Pleckstrin homology (PH) domain superfamily protein )

HSP 1 Score: 287.0 bits (733), Expect = 2.5e-77
Identity = 159/223 (71.30%), Postives = 188/223 (84.30%), Query Frame = 0


Query: 192 AEKDTDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDK 251
           A  + + E R++E+A A +DEDTGAQVAPIV+LEEVAVTTGEEDEDA+LDLK+KLYRFDK
Sbjct: 2   ATNEPEHEHRDEEEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFDK 61

Query: 252 DGNQWKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVW 311
           D NQWKERGAGTVKFLKHKNTGK+RLVMRQSKTLKICANH V S M+VQEH GNEKSCVW
Sbjct: 62  DANQWKERGAGTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCVW 121

Query: 312 HAADFADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSV 371
           HA DFADGELK+ELFCIRF SIENCKTF + F+E+AES+++K+E+KDA+  AGLLEKL+V
Sbjct: 122 HARDFADGELKDELFCIRFASIENCKTFMQKFKEVAESEEEKEESKDAADTAGLLEKLTV 181

Query: 372 EEKKGEED---KAGDTPAKT--KEEDEPKGEAEKKADAEKKND 410
           EE K EE    KA +T AKT  K E++ + EAEK  +A+K  +
Sbjct: 182 EETKTEEKTEAKAVET-AKTEVKAEEKKESEAEKSGEAKKTEE 223

[Close]

BLAST of Cp4.1LG02g11970 vs. TAIR 10
Match: AT2G30060.1 (Pleckstrin homology (PH) domain superfamily protein )

HSP 1 Score: 272.3 bits (695), Expect = 6.3e-73
Identity = 147/216 (68.06%), Postives = 178/216 (82.41%), Query Frame = 0


Query: 192 AEKDTDPER--REDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRF 251
           A    +PER  R++E+  A +DEDTGAQVAPIV+LEEVAVTTGEEDED ILDLK+KLYRF
Sbjct: 2   ASISNEPERENRDEEETGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRF 61

Query: 252 DKDGNQWKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSC 311
           DKDG+QWKERGAGTVKFLKH+ +GK+RLVMRQSKTLKICANHLV S M+VQEHAGN+KSC
Sbjct: 62  DKDGSQWKERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSC 121

Query: 312 VWHAADFADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKL 371
           VWHA DF+DGELK+ELFCIRF S+ENCK F + F+E+AES+++K+E+KDAS  AGLLEKL
Sbjct: 122 VWHARDFSDGELKDELFCIRFASVENCKAFMQKFKEVAESEEEKEESKDASDTAGLLEKL 181

Query: 372 SVEEKKGEEDKAGDTPAKTKEEDEPKGEAEKKADAE 406
           +VEEK+ E+      P +  EE++     E+K   E
Sbjct: 182 TVEEKESEK-----KPVEKAEENKKSEAVEEKKTEE 212

[Close]

BLAST of Cp4.1LG02g11970 vs. TAIR 10
Match: AT5G58590.1 (RAN binding protein 1 )

HSP 1 Score: 266.9 bits (681), Expect = 2.6e-71
Identity = 151/216 (69.91%), Postives = 169/216 (78.24%), Query Frame = 0


Query: 196 TDPERREDED-APAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGN 255
           T+PER   ED     +DEDTGAQVAPIV+LEEVAVTTGEEDEDA+LDLK+K+YRFDK+GN
Sbjct: 4   TEPERENREDETEVNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDKEGN 63

Query: 256 QWKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAA 315
           QWKERGAGTVK LKHK TGKVRLVMRQSKTLKICANHL+ S M+VQEH+GNEKSC+WHA 
Sbjct: 64  QWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLWHAT 123

Query: 316 DFADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEK 375
           DF+DGELK+ELFCIRF SIENCKTF E F EIAESQQ   E+     AAGL+E LSVEE 
Sbjct: 124 DFSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQVGKESTQGDEAAGLIENLSVEEN 183

Query: 376 KGEEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE 411
             EE       AK  EE EP  E +K+   EK  +E
Sbjct: 184 ISEE------KAKEAEEKEPAKE-DKETKKEKVEEE 212

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g11970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LMK7	3.5e-76	71.30	Ran-binding protein 1 homolog a OS=Arabidopsis thaliana OX=3702 GN=RANBP1A PE=1 ...	[more]
Q8RWG8	8.8e-72	68.06	Ran-binding protein 1 homolog b OS=Arabidopsis thaliana OX=3702 GN=RANBP1B PE=1 ...	[more]
P92985	3.7e-70	69.91	Ran-binding protein 1 homolog c OS=Arabidopsis thaliana OX=3702 GN=RANBP1C PE=2 ...	[more]
Q9ERU9	1.1e-45	30.82	E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2	[more]
P49792	1.2e-44	30.36	E3 SUMO-protein ligase RanBP2 OS=Homo sapiens OX=9606 GN=RANBP2 PE=1 SV=2	[more]

BLAST of Cp4.1LG02g11970 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7036999.1	2.08e-274	98.53	Ran-binding protein 1-like c [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022949353.1	2.05e-139	100.00	ran-binding protein 1 homolog a-like [Cucurbita moschata] >XP_023523176.1 ran-bi...	[more]
XP_022998583.1	3.37e-138	99.07	ran-binding protein 1 homolog a-like [Cucurbita maxima]	[more]
XP_023523178.1	7.21e-124	99.48	ran-binding protein 1 homolog a-like [Cucurbita pepo subsp. pepo]	[more]
XP_022949354.1	1.57e-120	98.43	ran-binding protein 1 homolog b-like [Cucurbita moschata]	[more]

BLAST of Cp4.1LG02g11970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GBT0	9.94e-140	100.00	ran-binding protein 1 homolog a-like OS=Cucurbita moschata OX=3662 GN=LOC1114527...	[more]
A0A6J1KH56	1.63e-138	99.07	ran-binding protein 1 homolog a-like OS=Cucurbita maxima OX=3661 GN=LOC111493171...	[more]
A0A6J1GCK9	7.61e-121	98.43	ran-binding protein 1 homolog b-like OS=Cucurbita moschata OX=3662 GN=LOC1114527...	[more]
A0A6J1I618	7.42e-120	87.85	ran-binding protein 1 homolog a-like OS=Cucurbita maxima OX=3661 GN=LOC111469535...	[more]
A0A6J1KEQ3	1.44e-118	96.86	ran-binding protein 1 homolog b-like OS=Cucurbita maxima OX=3661 GN=LOC111493172...	[more]

BLAST of Cp4.1LG02g11970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07140.1	2.5e-77	71.30	Pleckstrin homology (PH) domain superfamily protein	[more]
AT2G30060.1	6.3e-73	68.06	Pleckstrin homology (PH) domain superfamily protein	[more]
AT5G58590.1	2.6e-71	69.91	RAN binding protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 150..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..221
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 349..410
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 368..410
None	No IPR available	PANTHER	PTHR23138:SF156	RAN-BINDING PROTEIN 1 HOMOLOG C-LIKE	coord: 3..206
None	No IPR available	PANTHER	PTHR23138	RAN BINDING PROTEIN	coord: 3..206
None	No IPR available	PANTHER	PTHR23138	RAN BINDING PROTEIN	coord: 199..409
None	No IPR available	PANTHER	PTHR23138:SF156	RAN-BINDING PROTEIN 1 HOMOLOG C-LIKE	coord: 199..409
None	No IPR available	CDD	cd13179	RanBD_RanBP1	coord: 215..348 e-value: 1.26166E-65 score: 203.954
None	No IPR available	CDD	cd13179	RanBD_RanBP1	coord: 16..149 e-value: 5.89744E-65 score: 202.028
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 220..347
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 17..154
IPR000156	Ran binding domain	SMART	SM00160	ranbd_3	coord: 19..147 e-value: 2.0E-39 score: 147.0 coord: 218..346 e-value: 4.3E-43 score: 159.2
IPR000156	Ran binding domain	PFAM	PF00638	Ran_BP1	coord: 229..346 e-value: 2.1E-41 score: 141.0 coord: 30..147 e-value: 8.7E-39 score: 132.6
IPR000156	Ran binding domain	PROSITE	PS50196	RANBD1	coord: 18..153 score: 33.881577
IPR000156	Ran binding domain	PROSITE	PS50196	RANBD1	coord: 217..352 score: 35.210735
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 201..366 e-value: 1.9E-54 score: 185.6 coord: 2..168 e-value: 7.4E-53 score: 180.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g11970.1	Cp4.1LG02g11970.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046907	intracellular transport
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005643	nuclear pore
molecular_function	GO:0005096	GTPase activator activity