Cp4.1LG02g11910 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g11910
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RING-H2 finger protein ATL63-like
Location	Cp4.1LG02: 10837172 .. 10837915 (+)
RNA-Seq Expression	Cp4.1LG02g11910
Synteny	Cp4.1LG02g11910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTCAATTCCACTTCACTCTCTGATTTCACTCAGAGCATTTTCTCCTACAACAGCAACGTCATTCTCGCCGCTCTCATTTCTCTTCTCCTCGTCGTCCTCTTTGTCCTTCTCCTCCATGCCTACGCCAATTGTTTCTTCCCTCGGCCTCGCCACCGTCATGCTCAGCGGAGTTCCGTCACTGTCTCCTACGTCCTTGGACCGCCTCGCCTCTCGCGTTTCGAATCGATTCCGTTCGATTTAGGCTTCGCTCAGTCGAAAGGTCTTGACTCGTCTGTAATCTCTGCGATTCCTCTGTTCGTTTATGAATCGGAGGAGAAGAAGTGTGCAACGGTGATGGAGTGCGTGATTTGCCTCAGTGAATTTGAGGAACGAGAAATCGGACGGCGGTTGCCGATATGTAACCATGGATTTCACCTTGAATGCATCGATATGTGGTTGAATTCTCACGCGAATTGTCCTGTTTGTAGAGCGCCAGTAGTTGCAGAGGCGGTGGAATCTGGCGGGTTGAGCGGCGAGAGTGAAATCGGAGAAGAGATTGTAACGGAGGAGCGGACTAATTGTGAGATTCAGAGAAACGAGGAGCAAAACGGTCAGTTTCATTCTTCTTCTTCCTCTTCAAGTTCTTCGACTGATCCGCCATTGATGTCGCTTGGAGCATCTTTGAAGCGAATGTTGAGTAGAAACAGATCGAATGGAAGGATTTTCCCCTCTTCCAATGGCGATGAATTAAATGTTTGA

mRNA sequence

ATGGCGTTCAATTCCACTTCACTCTCTGATTTCACTCAGAGCATTTTCTCCTACAACAGCAACGTCATTCTCGCCGCTCTCATTTCTCTTCTCCTCGTCGTCCTCTTTGTCCTTCTCCTCCATGCCTACGCCAATTGTTTCTTCCCTCGGCCTCGCCACCGTCATGCTCAGCGGAGTTCCGTCACTGTCTCCTACGTCCTTGGACCGCCTCGCCTCTCGCGTTTCGAATCGATTCCGTTCGATTTAGGCTTCGCTCAGTCGAAAGGTCTTGACTCGTCTGTAATCTCTGCGATTCCTCTGTTCGTTTATGAATCGGAGGAGAAGAAGTGTGCAACGGTGATGGAGTGCGTGATTTGCCTCAGTGAATTTGAGGAACGAGAAATCGGACGGCGGTTGCCGATATGTAACCATGGATTTCACCTTGAATGCATCGATATGTGGTTGAATTCTCACGCGAATTGTCCTGTTTGTAGAGCGCCAGTAGTTGCAGAGGCGGTGGAATCTGGCGGGTTGAGCGGCGAGAGTGAAATCGGAGAAGAGATTGTAACGGAGGAGCGGACTAATTGTGAGATTCAGAGAAACGAGGAGCAAAACGGTCAGTTTCATTCTTCTTCTTCCTCTTCAAGTTCTTCGACTGATCCGCCATTGATGTCGCTTGGAGCATCTTTGAAGCGAATGTTGAGTAGAAACAGATCGAATGGAAGGATTTTCCCCTCTTCCAATGGCGATGAATTAAATGTTTGA

Coding sequence (CDS)

ATGGCGTTCAATTCCACTTCACTCTCTGATTTCACTCAGAGCATTTTCTCCTACAACAGCAACGTCATTCTCGCCGCTCTCATTTCTCTTCTCCTCGTCGTCCTCTTTGTCCTTCTCCTCCATGCCTACGCCAATTGTTTCTTCCCTCGGCCTCGCCACCGTCATGCTCAGCGGAGTTCCGTCACTGTCTCCTACGTCCTTGGACCGCCTCGCCTCTCGCGTTTCGAATCGATTCCGTTCGATTTAGGCTTCGCTCAGTCGAAAGGTCTTGACTCGTCTGTAATCTCTGCGATTCCTCTGTTCGTTTATGAATCGGAGGAGAAGAAGTGTGCAACGGTGATGGAGTGCGTGATTTGCCTCAGTGAATTTGAGGAACGAGAAATCGGACGGCGGTTGCCGATATGTAACCATGGATTTCACCTTGAATGCATCGATATGTGGTTGAATTCTCACGCGAATTGTCCTGTTTGTAGAGCGCCAGTAGTTGCAGAGGCGGTGGAATCTGGCGGGTTGAGCGGCGAGAGTGAAATCGGAGAAGAGATTGTAACGGAGGAGCGGACTAATTGTGAGATTCAGAGAAACGAGGAGCAAAACGGTCAGTTTCATTCTTCTTCTTCCTCTTCAAGTTCTTCGACTGATCCGCCATTGATGTCGCTTGGAGCATCTTTGAAGCGAATGTTGAGTAGAAACAGATCGAATGGAAGGATTTTCCCCTCTTCCAATGGCGATGAATTAAATGTTTGA

Protein sequence

MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGGLSGESEIGEEIVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRIFPSSNGDELNV

Homology

[Close]

BLAST of Cp4.1LG02g11910 vs. ExPASy Swiss-Prot
Match: Q9LUZ9 (RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 4.7e-36
Identity = 88/181 (48.62%), Postives = 113/181 (62.43%), Query Frame = 0


Query: 6   TSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFP------------RPRH 65
           +SLS F + + SYNSNV+LAAL+ LLLVVLFVLLLH YA  F+             R R 
Sbjct: 13  SSLSSFLKILSSYNSNVLLAALVFLLLVVLFVLLLHFYARFFWSPSHQDFSAAARHRRRR 72

Query: 66  RHAQRSSVTVSYVLGPPRLSRFE---SIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKC 125
           R  +R +VT + ++    L  F+   S P        KGLDSSVIS+IPLFVYE  E++ 
Sbjct: 73  RRNRRRTVTTTRIIPSLPLGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVYEENEEEE 132

Query: 126 ATVMECVICLSEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGG 172
               ECVICL  +E  + GR+L  C HGFH+ECIDMWL+SH+ CP+CR+PV+A   +   
Sbjct: 133 DEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSDEEN 192

[Close]

BLAST of Cp4.1LG02g11910 vs. ExPASy Swiss-Prot
Match: Q8L9T5 (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 109.0 bits (271), Expect = 7.8e-23
Identity = 68/203 (33.50%), Postives = 108/203 (53.20%), Query Frame = 0


Query: 16  FSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS----VTVSYVLGPPR 75
           ++ +  ++L+A++ L  VV+ ++ LH YA  +  R R RH +R S     T+ +    P 
Sbjct: 24  YAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPS 83

Query: 76  LSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEEREIGRR 135
            +    +        S+GLD +VI ++P+F +  E  K    +EC +CLSEFEE E GR 
Sbjct: 84  TAATSVV-------ASRGLDPNVIKSLPVFTFSDETHK--DPIECAVCLSEFEESETGRV 143

Query: 136 LPICNHGFHLECIDMWLNSHANCPVCRAPVVAEA-VESGGLSGESEIGEEIVTEERTNCE 195
           LP C H FH++CIDMW +SH+ CP+CR+ V + A +ES   + E E+   + ++     E
Sbjct: 144 LPNCQHTFHVDCIDMWFHSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDPVLVIE 203

Query: 196 IQRNEEQNGQFHSSSSSSSSSTD 214
              +     + H S SS     D
Sbjct: 204 PSSSSGLTDEPHGSGSSQMLRED 217

[Close]

BLAST of Cp4.1LG02g11910 vs. ExPASy Swiss-Prot
Match: O22255 (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 6.6e-22
Identity = 62/174 (35.63%), Postives = 91/174 (52.30%), Query Frame = 0


Query: 12  TQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVTVSYVLGPPR 71
           T S ++ N  ++L+++I L + V+ +L  H+YA   F R   R  +R    +  +   PR
Sbjct: 18  TSSGYALNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRRIRRRIRSHLRTLSASPR 77

Query: 72  LSRFESIPFDLGFAQSKGLDSSVISAIPLFVYES------EEKKCATVMECVICLSEFEE 131
                           + LD +V+  IP+FVY S      EEK+     EC +CLSEFEE
Sbjct: 78  ---------------DQALDQAVLDKIPIFVYSSKNPPPPEEKE-----ECSVCLSEFEE 137

Query: 132 REIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVA--EAVESGGLSGESEI 178
            + GR LP C H FH++CID W  S + CP+CRAPV    + +E+G  S  S +
Sbjct: 138 EDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPVQPPFQVIETGSSSSSSPL 171

[Close]

BLAST of Cp4.1LG02g11910 vs. ExPASy Swiss-Prot
Match: Q9LZJ6 (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.7e-20
Identity = 55/148 (37.16%), Postives = 83/148 (56.08%), Query Frame = 0


Query: 14  SIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVTVSYVLGPPRLS 73
           S +S N  ++LA++I L + V+ +L  H+YA   F R   R  +R S  +  +      +
Sbjct: 20  SRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRRIRRRISAHLRSLAAARDPT 79

Query: 74  RFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEEREIGRRLP 133
           +  S            LD +V+  IP+FVY  +  + + + EC +CLSEFEE + GR LP
Sbjct: 80  QSSS--------SLSPLDPTVLEKIPIFVYSVKTHE-SPLEECSVCLSEFEEDDEGRVLP 139

Query: 134 ICNHGFHLECIDMWLNSHANCPVCRAPV 162
            C H FH++CID W  S ++CP+CRAPV
Sbjct: 140 KCGHVFHVDCIDTWFRSRSSCPLCRAPV 158

[Close]

BLAST of Cp4.1LG02g11910 vs. ExPASy Swiss-Prot
Match: Q9SLC3 (E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana OX=3702 GN=ATL41 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 6.8e-19
Identity = 74/224 (33.04%), Postives = 113/224 (50.45%), Query Frame = 0


Query: 14  SIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVTVSYVLGPPRLS 73
           S +  NS ++LAA+ SL  V+L V  LH YA   F   R R A R         G P + 
Sbjct: 23  STYDLNSKIMLAAVASLSGVILIVFALHLYAR--FVLRRRREAFR---------GLPVIF 82

Query: 74  RFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEEREIGRRLP 133
           R    PF++     +GL+ +VI+++P F   + +   A+  EC +CLS  +E++  R LP
Sbjct: 83  RH---PFEM---PKRGLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELP 142

Query: 134 ICNHGFHLECIDMWLNSHANCPVCRAPVVAE-AVESGGLSGESEIGEEIVTEERTNCEIQ 193
            C H FH++C+D WL + + CPVCR  V     +E     G      +++ E R N  ++
Sbjct: 143 NCKHIFHVDCVDTWLTTCSTCPVCRTEVEPRPRLEPEPREGPVGTAPQLLVETRLNLTVE 202

Query: 194 RNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRI 237
                     +SSSSS + T     S   S +++L+R RS+ RI
Sbjct: 203 A---------ASSSSSDNKTVVSPASRLNSFRKILTRERSSNRI 220

[Close]

BLAST of Cp4.1LG02g11910 vs. NCBI nr
Match: XP_023521602.1 (RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo] >XP_023521603.1 RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo] >XP_023523166.1 RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 477 bits (1227), Expect = 2.18e-169
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60
           MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS
Sbjct: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60

Query: 61  VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120
           VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL
Sbjct: 61  VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120

Query: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGGLSGESEIGEE 180
           SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGGLSGESEIGEE
Sbjct: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGGLSGESEIGEE 180

Query: 181 IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRIFPSS 240
           IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRIFPSS
Sbjct: 181 IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRIFPSS 240

Query: 241 NGDELNV 247
           NGDELNV
Sbjct: 241 NGDELNV 247

[Close]

BLAST of Cp4.1LG02g11910 vs. NCBI nr
Match: XP_022949238.1 (RING-H2 finger protein ATL63-like [Cucurbita moschata] >KAG6607326.1 RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 472 bits (1214), Expect = 2.09e-167
Identity = 245/247 (99.19%), Postives = 245/247 (99.19%), Query Frame = 0


Query: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60
           MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS
Sbjct: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60

Query: 61  VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120
           VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL
Sbjct: 61  VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120

Query: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGGLSGESEIGEE 180
           SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESG LSGE EIGEE
Sbjct: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGRLSGEREIGEE 180

Query: 181 IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRIFPSS 240
           IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRIFPSS
Sbjct: 181 IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRIFPSS 240

Query: 241 NGDELNV 247
           NGDELNV
Sbjct: 241 NGDELNV 247

[Close]

BLAST of Cp4.1LG02g11910 vs. NCBI nr
Match: KAG7037003.1 (E3 ubiquitin-protein ligase ATL41, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 468 bits (1203), Expect = 9.93e-166
Identity = 243/247 (98.38%), Postives = 243/247 (98.38%), Query Frame = 0


Query: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60
           MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS
Sbjct: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60

Query: 61  VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120
           V VSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL
Sbjct: 61  VNVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120

Query: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGGLSGESEIGEE 180
           SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESG LSGE EIGEE
Sbjct: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGRLSGEREIGEE 180

Query: 181 IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRIFPSS 240
           IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPP MSLGASLKRMLSRNRSNGRIFPSS
Sbjct: 181 IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPSMSLGASLKRMLSRNRSNGRIFPSS 240

Query: 241 NGDELNV 247
           NGDELNV
Sbjct: 241 NGDELNV 247

[Close]

BLAST of Cp4.1LG02g11910 vs. NCBI nr
Match: XP_022998608.1 (RING-H2 finger protein ATL63-like [Cucurbita maxima])

HSP 1 Score: 464 bits (1195), Expect = 1.65e-164
Identity = 240/247 (97.17%), Postives = 243/247 (98.38%), Query Frame = 0


Query: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60
           MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS
Sbjct: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60

Query: 61  VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120
           VTVSYVLGPPRLSRF+SIPFDLGFAQSKGLDSSVIS IPLFVYESEEKKCATVMECVICL
Sbjct: 61  VTVSYVLGPPRLSRFDSIPFDLGFAQSKGLDSSVISTIPLFVYESEEKKCATVMECVICL 120

Query: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGGLSGESEIGEE 180
           SEFEEREIGRRLPICNHGFHL+CIDMWLNSHANCPVCRAPVVAEAVES  LSGE EIGEE
Sbjct: 121 SEFEEREIGRRLPICNHGFHLDCIDMWLNSHANCPVCRAPVVAEAVESSRLSGEREIGEE 180

Query: 181 IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRIFPSS 240
           IVTEERTNCEIQRNEEQNGQFHSSSSSS+SSTDPPLMSLGASLKRMLSRNRSNGRIFPSS
Sbjct: 181 IVTEERTNCEIQRNEEQNGQFHSSSSSSNSSTDPPLMSLGASLKRMLSRNRSNGRIFPSS 240

Query: 241 NGDELNV 247
           NGDELNV
Sbjct: 241 NGDELNV 247

[Close]

BLAST of Cp4.1LG02g11910 vs. NCBI nr
Match: XP_023519269.1 (RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 390 bits (1003), Expect = 5.24e-135
Identity = 212/266 (79.70%), Postives = 228/266 (85.71%), Query Frame = 0


Query: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60
           MAFNSTSL  F QS+FSYNSN++LAALISLLLVVLFVLLLHAYANCFFP+PRHR   R+S
Sbjct: 1   MAFNSTSLIGFAQSVFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHR---RTS 60

Query: 61  VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120
           VTVSYVLGPPRLSRF+S+PFD G A SKGLD SVISAIPLFVYESEEKKCA VMECVICL
Sbjct: 61  VTVSYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICL 120

Query: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVV------AEAVESGGLSGE 180
           SEFEERE+GRRLP C+HGFHLECIDMWLNSHA+CPVCRAPV+      ++AVESG LSGE
Sbjct: 121 SEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDATDCSDAVESGRLSGE 180

Query: 181 SEIGEEIVTEERTNCEIQRNEEQNGQFHSSSSSSSSS-------------TDPPLMSLGA 240
            EIG EIVTEER NCEIQRNE QNGQFHS SSSSSSS             TD PLMSLGA
Sbjct: 181 REIGGEIVTEERRNCEIQRNEGQNGQFHSDSSSSSSSSSSSSSLSSSSSSTDQPLMSLGA 240

Query: 241 SLKRMLSRNRSNGRIFPSSNGDELNV 247
           SLKRMLSRNRS+GRIFPSS+GDEL+V
Sbjct: 241 SLKRMLSRNRSDGRIFPSSDGDELDV 263

[Close]

BLAST of Cp4.1LG02g11910 vs. ExPASy TrEMBL
Match: A0A6J1GBH1 (RING-H2 finger protein ATL63-like OS=Cucurbita moschata OX=3662 GN=LOC111452651 PE=4 SV=1)

HSP 1 Score: 472 bits (1214), Expect = 1.01e-167
Identity = 245/247 (99.19%), Postives = 245/247 (99.19%), Query Frame = 0


Query: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60
           MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS
Sbjct: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60

Query: 61  VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120
           VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL
Sbjct: 61  VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120

Query: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGGLSGESEIGEE 180
           SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESG LSGE EIGEE
Sbjct: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGRLSGEREIGEE 180

Query: 181 IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRIFPSS 240
           IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRIFPSS
Sbjct: 181 IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRIFPSS 240

Query: 241 NGDELNV 247
           NGDELNV
Sbjct: 241 NGDELNV 247

[Close]

BLAST of Cp4.1LG02g11910 vs. ExPASy TrEMBL
Match: A0A6J1KH83 (RING-H2 finger protein ATL63-like OS=Cucurbita maxima OX=3661 GN=LOC111493195 PE=4 SV=1)

HSP 1 Score: 464 bits (1195), Expect = 7.97e-165
Identity = 240/247 (97.17%), Postives = 243/247 (98.38%), Query Frame = 0


Query: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60
           MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS
Sbjct: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60

Query: 61  VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120
           VTVSYVLGPPRLSRF+SIPFDLGFAQSKGLDSSVIS IPLFVYESEEKKCATVMECVICL
Sbjct: 61  VTVSYVLGPPRLSRFDSIPFDLGFAQSKGLDSSVISTIPLFVYESEEKKCATVMECVICL 120

Query: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGGLSGESEIGEE 180
           SEFEEREIGRRLPICNHGFHL+CIDMWLNSHANCPVCRAPVVAEAVES  LSGE EIGEE
Sbjct: 121 SEFEEREIGRRLPICNHGFHLDCIDMWLNSHANCPVCRAPVVAEAVESSRLSGEREIGEE 180

Query: 181 IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRIFPSS 240
           IVTEERTNCEIQRNEEQNGQFHSSSSSS+SSTDPPLMSLGASLKRMLSRNRSNGRIFPSS
Sbjct: 181 IVTEERTNCEIQRNEEQNGQFHSSSSSSNSSTDPPLMSLGASLKRMLSRNRSNGRIFPSS 240

Query: 241 NGDELNV 247
           NGDELNV
Sbjct: 241 NGDELNV 247

[Close]

BLAST of Cp4.1LG02g11910 vs. ExPASy TrEMBL
Match: A0A6J1HPE0 (RING-H2 finger protein ATL63-like OS=Cucurbita moschata OX=3662 GN=LOC111464835 PE=4 SV=1)

HSP 1 Score: 390 bits (1003), Expect = 3.03e-135
Identity = 214/271 (78.97%), Postives = 229/271 (84.50%), Query Frame = 0


Query: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60
           MAFNSTSL  F QSIFSYNSN++LAALISLLLVVLFVLLLHAYANCFFP+PRHR   R+S
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHR---RTS 60

Query: 61  VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120
           VTVSYVLGPPRLSRF+S+PFD G A SKGLD SVISAIPLFVYESEEKKCA VMECVICL
Sbjct: 61  VTVSYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICL 120

Query: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVV------AEAVESGGLSGE 180
           SEFEERE+GRRLP C+HGFHLECIDMWLNSHA+CPVCRAPV+      ++AVESG LSGE
Sbjct: 121 SEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGE 180

Query: 181 SEIGEEIVTEERTNCEIQRNEEQNGQFHSSSSSSSSS------------------TDPPL 240
            EIG EIVTEER NCEIQRNE QNGQFHSSSSSSSSS                  TD PL
Sbjct: 181 REIGGEIVTEERRNCEIQRNEGQNGQFHSSSSSSSSSSSSSSSSSSSSLSSSSSSTDQPL 240

Query: 241 MSLGASLKRMLSRNRSNGRIFPSSNGDELNV 247
           MSLGASLKRMLSRNRS+GRIFPSS+GDEL+V
Sbjct: 241 MSLGASLKRMLSRNRSDGRIFPSSDGDELDV 268

[Close]

BLAST of Cp4.1LG02g11910 vs. ExPASy TrEMBL
Match: A0A6J1HZJ3 (RING-H2 finger protein ATL63-like OS=Cucurbita maxima OX=3661 GN=LOC111469533 PE=4 SV=1)

HSP 1 Score: 389 bits (1000), Expect = 6.30e-135
Identity = 211/262 (80.53%), Postives = 228/262 (87.02%), Query Frame = 0


Query: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60
           MAFNSTSL  F QSIFSYNSN++LAALISLLLVVLFVLLLHAYANCFFP+PRHR   R+S
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHR---RTS 60

Query: 61  VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120
           VTVSYVLGPPRLSRF+S+PFD G A SKGLD SVISAIPLFVYESEEKKC  VMECVICL
Sbjct: 61  VTVSYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCTAVMECVICL 120

Query: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVV------AEAVESGGLSGE 180
           SEFEERE+GRRLP C+HGFHLECIDMWLNSHA+CPVCRAPV+      ++AVESG LSGE
Sbjct: 121 SEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGE 180

Query: 181 SEIGEEIVTEERTNCEIQRNEEQNGQFHSSSSSSSSS---------TDPPLMSLGASLKR 240
            EIG EIVTEER+NCEIQRNE QNGQF+S SSSSSSS         TD PLMSLGASLKR
Sbjct: 181 REIGGEIVTEERSNCEIQRNEGQNGQFYSDSSSSSSSSSLSSSSSSTDQPLMSLGASLKR 240

Query: 241 MLSRNRSNGRIFPSSNGDELNV 247
           MLSRNRS+GRIFPSS+GDEL+V
Sbjct: 241 MLSRNRSDGRIFPSSDGDELDV 259

[Close]

BLAST of Cp4.1LG02g11910 vs. ExPASy TrEMBL
Match: A0A1S3C6K6 (RING-H2 finger protein ATL63 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497058 PE=4 SV=1)

HSP 1 Score: 339 bits (870), Expect = 1.92e-115
Identity = 188/248 (75.81%), Postives = 205/248 (82.66%), Query Frame = 0


Query: 4   NSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVTV 63
           NSTSL+ F QSIFSYNSN++LAALISLLLVVLFVLLLHAYANCFFP PRHR  +R+SVTV
Sbjct: 5   NSTSLTQFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHR--RRTSVTV 64

Query: 64  SYVLGPPRLSRFESI-PFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSE 123
           SYVL PPRLSRF+S+ PFDLG A SKGLD SVISAIPLFVYESEEKKCA  MECVICLSE
Sbjct: 65  SYVLAPPRLSRFDSVVPFDLGSAPSKGLDPSVISAIPLFVYESEEKKCAATMECVICLSE 124

Query: 124 FEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGGL--SGESEIGEE 183
           FEERE+GRRLP C HGFHLECIDMWLNSHANCPVCR PV+ EAV+      SGE EIG E
Sbjct: 125 FEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAAESGEGEIGRE 184

Query: 184 IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMS-LGASLKRMLSRNRSNGRIFPS 243
            V           NE Q+GQF+S SSSSSS   PPLMS +GASL R+LSRNRS+GRIFPS
Sbjct: 185 TV-----------NEGQSGQFNSDSSSSSSIDPPPLMSSIGASLIRILSRNRSDGRIFPS 239

Query: 244 SNGDELNV 247
           SNG+EL+V
Sbjct: 245 SNGEELDV 239

[Close]

BLAST of Cp4.1LG02g11910 vs. TAIR 10
Match: AT5G58580.1 (TOXICOS EN LEVADURA 63 )

HSP 1 Score: 152.9 bits (385), Expect = 3.3e-37
Identity = 88/181 (48.62%), Postives = 113/181 (62.43%), Query Frame = 0


Query: 6   TSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFP------------RPRH 65
           +SLS F + + SYNSNV+LAAL+ LLLVVLFVLLLH YA  F+             R R 
Sbjct: 13  SSLSSFLKILSSYNSNVLLAALVFLLLVVLFVLLLHFYARFFWSPSHQDFSAAARHRRRR 72

Query: 66  RHAQRSSVTVSYVLGPPRLSRFE---SIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKC 125
           R  +R +VT + ++    L  F+   S P        KGLDSSVIS+IPLFVYE  E++ 
Sbjct: 73  RRNRRRTVTTTRIIPSLPLGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVYEENEEEE 132

Query: 126 ATVMECVICLSEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGG 172
               ECVICL  +E  + GR+L  C HGFH+ECIDMWL+SH+ CP+CR+PV+A   +   
Sbjct: 133 DEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSDEEN 192

[Close]

BLAST of Cp4.1LG02g11910 vs. TAIR 10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2 )

HSP 1 Score: 109.0 bits (271), Expect = 5.5e-24
Identity = 68/203 (33.50%), Postives = 108/203 (53.20%), Query Frame = 0


Query: 16  FSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS----VTVSYVLGPPR 75
           ++ +  ++L+A++ L  VV+ ++ LH YA  +  R R RH +R S     T+ +    P 
Sbjct: 24  YAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPS 83

Query: 76  LSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEEREIGRR 135
            +    +        S+GLD +VI ++P+F +  E  K    +EC +CLSEFEE E GR 
Sbjct: 84  TAATSVV-------ASRGLDPNVIKSLPVFTFSDETHK--DPIECAVCLSEFEESETGRV 143

Query: 136 LPICNHGFHLECIDMWLNSHANCPVCRAPVVAEA-VESGGLSGESEIGEEIVTEERTNCE 195
           LP C H FH++CIDMW +SH+ CP+CR+ V + A +ES   + E E+   + ++     E
Sbjct: 144 LPNCQHTFHVDCIDMWFHSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDPVLVIE 203

Query: 196 IQRNEEQNGQFHSSSSSSSSSTD 214
              +     + H S SS     D
Sbjct: 204 PSSSSGLTDEPHGSGSSQMLRED 217

[Close]

BLAST of Cp4.1LG02g11910 vs. TAIR 10
Match: AT2G47560.1 (RING/U-box superfamily protein )

HSP 1 Score: 105.9 bits (263), Expect = 4.7e-23
Identity = 62/174 (35.63%), Postives = 91/174 (52.30%), Query Frame = 0


Query: 12  TQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVTVSYVLGPPR 71
           T S ++ N  ++L+++I L + V+ +L  H+YA   F R   R  +R    +  +   PR
Sbjct: 18  TSSGYALNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRRIRRRIRSHLRTLSASPR 77

Query: 72  LSRFESIPFDLGFAQSKGLDSSVISAIPLFVYES------EEKKCATVMECVICLSEFEE 131
                           + LD +V+  IP+FVY S      EEK+     EC +CLSEFEE
Sbjct: 78  ---------------DQALDQAVLDKIPIFVYSSKNPPPPEEKE-----ECSVCLSEFEE 137

Query: 132 REIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVA--EAVESGGLSGESEI 178
            + GR LP C H FH++CID W  S + CP+CRAPV    + +E+G  S  S +
Sbjct: 138 EDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPVQPPFQVIETGSSSSSSPL 171

[Close]

BLAST of Cp4.1LG02g11910 vs. TAIR 10
Match: AT3G62690.1 (AtL5 )

HSP 1 Score: 99.8 bits (247), Expect = 3.4e-21
Identity = 55/148 (37.16%), Postives = 83/148 (56.08%), Query Frame = 0


Query: 14  SIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVTVSYVLGPPRLS 73
           S +S N  ++LA++I L + V+ +L  H+YA   F R   R  +R S  +  +      +
Sbjct: 20  SRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRRIRRRISAHLRSLAAARDPT 79

Query: 74  RFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEEREIGRRLP 133
           +  S            LD +V+  IP+FVY  +  + + + EC +CLSEFEE + GR LP
Sbjct: 80  QSSS--------SLSPLDPTVLEKIPIFVYSVKTHE-SPLEECSVCLSEFEEDDEGRVLP 139

Query: 134 ICNHGFHLECIDMWLNSHANCPVCRAPV 162
            C H FH++CID W  S ++CP+CRAPV
Sbjct: 140 KCGHVFHVDCIDTWFRSRSSCPLCRAPV 158

[Close]

BLAST of Cp4.1LG02g11910 vs. TAIR 10
Match: AT2G42360.1 (RING/U-box superfamily protein )

HSP 1 Score: 95.9 bits (237), Expect = 4.8e-20
Identity = 74/224 (33.04%), Postives = 113/224 (50.45%), Query Frame = 0


Query: 14  SIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVTVSYVLGPPRLS 73
           S +  NS ++LAA+ SL  V+L V  LH YA   F   R R A R         G P + 
Sbjct: 23  STYDLNSKIMLAAVASLSGVILIVFALHLYAR--FVLRRRREAFR---------GLPVIF 82

Query: 74  RFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEEREIGRRLP 133
           R    PF++     +GL+ +VI+++P F   + +   A+  EC +CLS  +E++  R LP
Sbjct: 83  RH---PFEM---PKRGLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELP 142

Query: 134 ICNHGFHLECIDMWLNSHANCPVCRAPVVAE-AVESGGLSGESEIGEEIVTEERTNCEIQ 193
            C H FH++C+D WL + + CPVCR  V     +E     G      +++ E R N  ++
Sbjct: 143 NCKHIFHVDCVDTWLTTCSTCPVCRTEVEPRPRLEPEPREGPVGTAPQLLVETRLNLTVE 202

Query: 194 RNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRI 237
                     +SSSSS + T     S   S +++L+R RS+ RI
Sbjct: 203 A---------ASSSSSDNKTVVSPASRLNSFRKILTRERSSNRI 220

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g11910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUZ9	4.7e-36	48.62	RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1	[more]
Q8L9T5	7.8e-23	33.50	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2	[more]
O22255	6.6e-22	35.63	RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1	[more]
Q9LZJ6	4.7e-20	37.16	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1	[more]
Q9SLC3	6.8e-19	33.04	E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana OX=3702 GN=ATL41 PE=1 ...	[more]

BLAST of Cp4.1LG02g11910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023521602.1	2.18e-169	100.00	RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo] >XP_023521603.1 R...	[more]
XP_022949238.1	2.09e-167	99.19	RING-H2 finger protein ATL63-like [Cucurbita moschata] >KAG6607326.1 RING-H2 fin...	[more]
KAG7037003.1	9.93e-166	98.38	E3 ubiquitin-protein ligase ATL41, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022998608.1	1.65e-164	97.17	RING-H2 finger protein ATL63-like [Cucurbita maxima]	[more]
XP_023519269.1	5.24e-135	79.70	RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG02g11910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GBH1	1.01e-167	99.19	RING-H2 finger protein ATL63-like OS=Cucurbita moschata OX=3662 GN=LOC111452651 ...	[more]
A0A6J1KH83	7.97e-165	97.17	RING-H2 finger protein ATL63-like OS=Cucurbita maxima OX=3661 GN=LOC111493195 PE...	[more]
A0A6J1HPE0	3.03e-135	78.97	RING-H2 finger protein ATL63-like OS=Cucurbita moschata OX=3662 GN=LOC111464835 ...	[more]
A0A6J1HZJ3	6.30e-135	80.53	RING-H2 finger protein ATL63-like OS=Cucurbita maxima OX=3661 GN=LOC111469533 PE...	[more]
A0A1S3C6K6	1.92e-115	75.81	RING-H2 finger protein ATL63 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497058 ...	[more]

BLAST of Cp4.1LG02g11910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58580.1	3.3e-37	48.62	TOXICOS EN LEVADURA 63	[more]
AT3G16720.1	5.5e-24	33.50	TOXICOS EN LEVADURA 2	[more]
AT2G47560.1	4.7e-23	35.63	RING/U-box superfamily protein	[more]
AT3G62690.1	3.4e-21	37.16	AtL5	[more]
AT2G42360.1	4.8e-20	33.04	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 116..157 e-value: 1.2E-6 score: 38.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 115..158 e-value: 4.6E-12 score: 46.1
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 116..158 score: 12.297489
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 82..163 e-value: 1.5E-22 score: 81.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..224
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..217
None	No IPR available	PANTHER	PTHR14155:SF514	CHROMATIN REGULATOR PHD FAMILY-RELATED	coord: 6..242
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 6..242
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 115..158 e-value: 1.15E-17 score: 72.3427
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 100..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g11910.1	Cp4.1LG02g11910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane