Cp4.1LG02g11780 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGTTGGAGGGCTAGTGAATGCAACATGTGGGAATGCAACAGAGTTGATATTAGCAATGTTAGCTTTACACCAAAACAAAATCCACATCTTGAAATTCTCCCTTTTGGGTTCCATTCTTTCCAATTTACTTCTAGTTCTTGGCACATCTCTTCTCTTTGGAGGCTTATCCAATCTCAACAAGCAACAAACATTCAACCCAGTAAGCCAAAAACAAAAATACTTTCAAATCGAACACGTTCGAGAAACAAGAAACAAGAACATTAACATTATCGATCATGTTTTCTCAACAGAAAGTCGCGAACGTAAGCTCTTTAGTGTTGCTACTCGGATTGCTATGCCAAATGCTGCCATTGATATCAAGATTTGCATCACCATCAGCTAAATTATGGACAGATTTGTCTGTTCTAGAGCTATCAAGAACTTGCAGCATCATAATGCTCATAGCTTATCTTGTTTATGTGTTCTTCCAATTGAAAACCCATAACCAATTTTTTGGTCTACCAGAGGTGATTATTCAAACTCTCTTGAACTCTAAGTATAATTTGTTGTCTAAACATGTGATGAATGGGTTGAATAGGAGGAAGAGGATGATGAAGAAATGGCAATAATTGGGGTTTGGAGCTCGTTTGGTTGGCTGGTGGGTATGACCATTGTCATAGCTGTTCTATCACAGTATGTTGTGGCTACAATTGAGGTATATTTCATTGAAAGCCTTTCTTTTTGTGTTTGTTTCCAAGAAATTATGGGTTTTTGTTGAGCGTAGGAGGCATCACAATCATGGGGAGTTTCGGTGAGCTTTATGAGTATAATTGTGCTGCCGATTATGGGTAATGCAGCTGAGCATGCTGGGTCGGTTATATTTGCTGTGAAGAACAAATTGGTATGTTTACATGTAACCGTTCAAGTCCATCGCTATCGGATATGATCTTCTTTGAGTTTTTCCTTTTGGGTTTTTCTTCGGTGTTTTAAAAACGGTATGTTAGGAATGTTAGGATCGATACCAGTTGTTAGGATCGCACAACAACGCACACGCTCGATCTAGATGAACACAAAGAGAAGGATAGAGAGAAGTTGCAAGGAGAACTCTGGCTAAAAGGATTTTTTATTGATGACTTCAGGCATGTACAACAAGAGAGTACAGAGAATAGAAAAGTACATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGTTAGGATCGATACCAGTTGTTAGGATCGCACAACAACGCACACGCTCGATCTAGATGAACACAAAGAGAAGGATAGAGAGAAGTTGCAAGGAGAACTCTGGCTAAAAGGATTTTTTATTGATGACTTCAGGCATGTACAACAAGAGAGTACAGAGAATAGAAAAGTACATTTTCAAAGCTATACCGGACCAGATATATATAGGGTATATTTTACTATATATAGCTTTACCAGATTTAGCCTTTACCATATATAGCTTTACTATATATAGCTTTACCAAATATAGCTTTACCGGATATAACCGTTGACCAAGCTATAAATAAGTATCAGGCTCCATAGCCTAACAAGGAAGAGGTTTCCACACCCTTATAATGCTTCGTTCTTCTCACTAACCGATGTGAGATCTCATAATCTACCCCCTTCGAGGCCTAGCGTTCTCGTTGGCACTTGTTCCCTTCTCCAATTGATGTGGGACCTCCTAATCCATCCCCCTTCTAGGCCCAGCAGTTTTCTTCCTGGCAAACCACCGTGTGTCCACCCTCTTTGGGGCTCAACCTCCTTACTGGCATATCGTCCGGTGTCTGGCTCTTATACCATTTGTAACCGCCCAAGCCCACCCCTAGTATGACTTTTCTTTTTGGGTTTCTCTTCAATATTTTTAAAACGTGTCTGCTAGGGAGAGGTTTCCACACTCCTATAAAGAATGTTTCGTTCTCCTCCCCAACTGATGTGAAATCTCACAATCCANCCCCCCCCCCCCCCTTCGAGATCCAGCAGTCTCGTGTCCACTCCCTTTCAGTTCTCAGCCTCCTCGTTGGCACATTGTCTGGGGTCGGGCTCTTTATACCATTTGTAACCGCCCAAGCCCACCCCTAGCATGACTTTTCCTTTCGGGTTTCTCTTCAAGATTTTTAAAGCGCATTTGTTGGGGAGATGTATCCACACTCTTATAAAGAATGTTTCGTTTTCTTCAATCGATGTGGGATCTCACAATCCACCCTTTTTGGGACCTAGTGTCCTTATTGACACACCGTCTCGTGTCCACTCCCCTTTGGGGCTCAGCCTCCTCGCTCGCACATTGCCCGATGTCTGGCTCTAATATCATTTGTAACAGCCCAAGTCCACCGCTAGCAGATATTGTCCTATTTGAGATTTTTCTTTCCGGTTTCCCCTCAAAATTCTTAAAACATGTCTACTAGGAAGAGGTTTCCACACCATTGTAAAGAACATTTCGTTCTCCTCCCCAACCGACGTGGAATCTCACACAAATCCTAAAGCATTAAGAACATACCACACCCGACCTAGAAAACATCACTTACTTATTTTGGTTGTTGTTGTTGTTGTGTAGGATATAACACTTGGGATAGCATTGGGATCAGCAGCTCAAATTTCACTGTTTGCGGTAATAAATTAGTAGTAAAAAAAAGAGGGTTAATGAAGATGAATAAGTTTATGATGATATGAACGTTTCAATTATTAGGTGCCTTTGAGTGTAGCTGTTGGATGGTGTTCGGGCATCAAAATGGATCTTGATTTCGGTCTCATCGAAACCGCGTCTCTCGCCTTCGCCATCGTCCTCACTCTATTCACTCTACAG ATGGCAGTTGGAGGGCTAGTGAATGCAACATGTGGGAATGCAACAGAGTTGATATTAGCAATGTTAGCTTTACACCAAAACAAAATCCACATCTTGAAATTCTCCCTTTTGGGTTCCATTCTTTCCAATTTACTTCTAGTTCTTGGCACATCTCTTCTCTTTGGAGGCTTATCCAATCTCAACAAGCAACAAACATTCAACCCAAAAGTCGCGAACGTAAGCTCTTTAGTGTTGCTACTCGGATTGCTATGCCAAATGCTGCCATTGATATCAAGATTTGCATCACCATCAGCTAAATTATGGACAGATTTGTCTGTTCTAGAGCTATCAAGAACTTGCAGCATCATAATGCTCATAGCTTATCTTGTTTATGTGTTCTTCCAATTGAAAACCCATAACCAATTTTTTGGTCTACCAGAGGAGGAAGAGGATGATGAAGAAATGGCAATAATTGGGGTTTGGAGCTCGTTTGGTTGGCTGGTGGGTATGACCATTGTCATAGCTGTTCTATCACAGTATGTTGTGGCTACAATTGAGGATATAACACTTGGGATAGCATTGGGATCAGCAGCTCAAATTTCACTGTTTGCGGTGCCTTTGAGTGTAGCTGTTGGATGGTGTTCGGGCATCAAAATGGATCTTGATTTCGGTCTCATCGAAACCGCGTCTCTCGCCTTCGCCATCGTCCTCACTCTATTCACTCTACAG ATGGCAGTTGGAGGGCTAGTGAATGCAACATGTGGGAATGCAACAGAGTTGATATTAGCAATGTTAGCTTTACACCAAAACAAAATCCACATCTTGAAATTCTCCCTTTTGGGTTCCATTCTTTCCAATTTACTTCTAGTTCTTGGCACATCTCTTCTCTTTGGAGGCTTATCCAATCTCAACAAGCAACAAACATTCAACCCAAAAGTCGCGAACGTAAGCTCTTTAGTGTTGCTACTCGGATTGCTATGCCAAATGCTGCCATTGATATCAAGATTTGCATCACCATCAGCTAAATTATGGACAGATTTGTCTGTTCTAGAGCTATCAAGAACTTGCAGCATCATAATGCTCATAGCTTATCTTGTTTATGTGTTCTTCCAATTGAAAACCCATAACCAATTTTTTGGTCTACCAGAGGAGGAAGAGGATGATGAAGAAATGGCAATAATTGGGGTTTGGAGCTCGTTTGGTTGGCTGGTGGGTATGACCATTGTCATAGCTGTTCTATCACAGTATGTTGTGGCTACAATTGAGGATATAACACTTGGGATAGCATTGGGATCAGCAGCTCAAATTTCACTGTTTGCGGTGCCTTTGAGTGTAGCTGTTGGATGGTGTTCGGGCATCAAAATGGATCTTGATTTCGGTCTCATCGAAACCGCGTCTCTCGCCTTCGCCATCGTCCTCACTCTATTCACTCTACAG MAVGGLVNATCGNATELILAMLALHQNKIHILKFSLLGSILSNLLLVLGTSLLFGGLSNLNKQQTFNPKVANVSSLVLLLGLLCQMLPLISRFASPSAKLWTDLSVLELSRTCSIIMLIAYLVYVFFQLKTHNQFFGLPEEEEDDEEMAIIGVWSSFGWLVGMTIVIAVLSQYVVATIEDITLGIALGSAAQISLFAVPLSVAVGWCSGIKMDLDFGLIETASLAFAIVLTLFTLQ Homology
BLAST of Cp4.1LG02g11780 vs. ExPASy Swiss-Prot
Match: Q93Z81 (Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana OX=3702 GN=CAX3 PE=1 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 6.6e-64 Identity = 147/283 (51.94%), Postives = 189/283 (66.78%), Query Frame = 0
BLAST of Cp4.1LG02g11780 vs. ExPASy Swiss-Prot
Match: Q39253 (Vacuolar cation/proton exchanger 1 OS=Arabidopsis thaliana OX=3702 GN=CAX1 PE=1 SV=3) HSP 1 Score: 229.6 bits (584), Expect = 3.8e-59 Identity = 137/281 (48.75%), Postives = 183/281 (65.12%), Query Frame = 0
BLAST of Cp4.1LG02g11780 vs. ExPASy Swiss-Prot
Match: Q5KTQ9 (Vacuolar cation/proton exchanger 1c OS=Oryza sativa subsp. japonica OX=39947 GN=CAX1c PE=2 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 1.1e-55 Identity = 130/279 (46.59%), Postives = 175/279 (62.72%), Query Frame = 0
BLAST of Cp4.1LG02g11780 vs. ExPASy Swiss-Prot
Match: Q769E5 (Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica OX=39947 GN=CAX1a PE=1 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 2.4e-53 Identity = 133/282 (47.16%), Postives = 173/282 (61.35%), Query Frame = 0
BLAST of Cp4.1LG02g11780 vs. ExPASy Swiss-Prot
Match: Q5TKG3 (Vacuolar cation/proton exchanger 1b OS=Oryza sativa subsp. japonica OX=39947 GN=CAX1b PE=2 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 4.0e-53 Identity = 133/283 (47.00%), Postives = 174/283 (61.48%), Query Frame = 0
BLAST of Cp4.1LG02g11780 vs. NCBI nr
Match: XP_023525542.1 (vacuolar cation/proton exchanger 3-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 411 bits (1057), Expect = 5.92e-142 Identity = 234/273 (85.71%), Postives = 234/273 (85.71%), Query Frame = 0
BLAST of Cp4.1LG02g11780 vs. NCBI nr
Match: XP_023525541.1 (vacuolar cation/proton exchanger 3-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 411 bits (1057), Expect = 1.31e-141 Identity = 234/273 (85.71%), Postives = 234/273 (85.71%), Query Frame = 0
BLAST of Cp4.1LG02g11780 vs. NCBI nr
Match: XP_022948772.1 (vacuolar cation/proton exchanger 3-like isoform X3 [Cucurbita moschata]) HSP 1 Score: 402 bits (1034), Expect = 1.74e-138 Identity = 228/273 (83.52%), Postives = 230/273 (84.25%), Query Frame = 0
BLAST of Cp4.1LG02g11780 vs. NCBI nr
Match: XP_022948771.1 (vacuolar cation/proton exchanger 3-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 402 bits (1034), Expect = 3.82e-138 Identity = 228/273 (83.52%), Postives = 230/273 (84.25%), Query Frame = 0
BLAST of Cp4.1LG02g11780 vs. NCBI nr
Match: XP_022948769.1 (vacuolar cation/proton exchanger 3-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 402 bits (1034), Expect = 7.29e-138 Identity = 228/273 (83.52%), Postives = 230/273 (84.25%), Query Frame = 0
BLAST of Cp4.1LG02g11780 vs. ExPASy TrEMBL
Match: A0A6J1GA59 (Vacuolar cation/proton exchanger OS=Cucurbita moschata OX=3662 GN=LOC111452341 PE=3 SV=1) HSP 1 Score: 402 bits (1034), Expect = 8.41e-139 Identity = 228/273 (83.52%), Postives = 230/273 (84.25%), Query Frame = 0
BLAST of Cp4.1LG02g11780 vs. ExPASy TrEMBL
Match: A0A6J1GA45 (Vacuolar cation/proton exchanger OS=Cucurbita moschata OX=3662 GN=LOC111452341 PE=3 SV=1) HSP 1 Score: 402 bits (1034), Expect = 1.85e-138 Identity = 228/273 (83.52%), Postives = 230/273 (84.25%), Query Frame = 0
BLAST of Cp4.1LG02g11780 vs. ExPASy TrEMBL
Match: A0A6J1GAW9 (Vacuolar cation/proton exchanger OS=Cucurbita moschata OX=3662 GN=LOC111452341 PE=3 SV=1) HSP 1 Score: 402 bits (1034), Expect = 3.53e-138 Identity = 228/273 (83.52%), Postives = 230/273 (84.25%), Query Frame = 0
BLAST of Cp4.1LG02g11780 vs. ExPASy TrEMBL
Match: A0A6J1KFJ8 (Vacuolar cation/proton exchanger OS=Cucurbita maxima OX=3661 GN=LOC111492783 PE=3 SV=1) HSP 1 Score: 397 bits (1021), Expect = 7.97e-137 Identity = 226/273 (82.78%), Postives = 229/273 (83.88%), Query Frame = 0
BLAST of Cp4.1LG02g11780 vs. ExPASy TrEMBL
Match: A0A6J1K6M4 (Vacuolar cation/proton exchanger OS=Cucurbita maxima OX=3661 GN=LOC111492783 PE=3 SV=1) HSP 1 Score: 397 bits (1021), Expect = 1.75e-136 Identity = 226/273 (82.78%), Postives = 229/273 (83.88%), Query Frame = 0
BLAST of Cp4.1LG02g11780 vs. TAIR 10
Match: AT3G51860.1 (cation exchanger 3 ) HSP 1 Score: 245.4 bits (625), Expect = 4.7e-65 Identity = 147/283 (51.94%), Postives = 189/283 (66.78%), Query Frame = 0
BLAST of Cp4.1LG02g11780 vs. TAIR 10
Match: AT2G38170.1 (cation exchanger 1 ) HSP 1 Score: 229.6 bits (584), Expect = 2.7e-60 Identity = 137/281 (48.75%), Postives = 183/281 (65.12%), Query Frame = 0
BLAST of Cp4.1LG02g11780 vs. TAIR 10
Match: AT2G38170.3 (cation exchanger 1 ) HSP 1 Score: 229.6 bits (584), Expect = 2.7e-60 Identity = 137/281 (48.75%), Postives = 183/281 (65.12%), Query Frame = 0
BLAST of Cp4.1LG02g11780 vs. TAIR 10
Match: AT5G01490.1 (cation exchanger 4 ) HSP 1 Score: 204.1 bits (518), Expect = 1.2e-52 Identity = 129/284 (45.42%), Postives = 178/284 (62.68%), Query Frame = 0
BLAST of Cp4.1LG02g11780 vs. TAIR 10
Match: AT2G38170.2 (cation exchanger 1 ) HSP 1 Score: 183.0 bits (463), Expect = 2.9e-46 Identity = 107/206 (51.94%), Postives = 150/206 (72.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|