Cp4.1LG02g11510 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g11510
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Copper transporter
Location	Cp4.1LG02: 10534294 .. 10534782 (+)
RNA-Seq Expression	Cp4.1LG02g11510
Synteny	Cp4.1LG02g11510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACTCCGACCCTCCGCCGCCGCCGATGGCTCCGATGAGCGGCGGCTCCGACGACGACATGCACTCTCACGGGATGCCGTCGTCATCAGGCATGACGATGATGCACATGACATTCTTCTGGGGAAAAAACACCCAAGTTTTATTCTCCGGCTGGCCGGGCAACCAGTCCGGCATGTATGCGCTGGCGTTGATATTGGTGTTTTTGCTGGCGGTGTCTGTTGAGTGGCTGTCTCGTTGGCGGCTGATGACCGAGATGGGGCCGAGAAATTTCGCCGCTGGGATCGTGCAGACGGCGGTGCATGGGGTTAGAATTGGAATTGCGTACATGGTTATGCTTGCTTTGATGTCGTTCAACGGCGGCGTTTTTATCGCTGCCATCGCCGGTCATTCATTTGGGTTTCTGATTTTTGGGAGCAGAGTCTTGAACAACACGAAATCAAAGCCGTACGATCAGGGTACGGCCGATCTTCCATCTGGGGTTTGCTGA

mRNA sequence

ATGCACTCCGACCCTCCGCCGCCGCCGATGGCTCCGATGAGCGGCGGCTCCGACGACGACATGCACTCTCACGGGATGCCGTCGTCATCAGGCATGACGATGATGCACATGACATTCTTCTGGGGAAAAAACACCCAAGTTTTATTCTCCGGCTGGCCGGGCAACCAGTCCGGCATGTATGCGCTGGCGTTGATATTGGTGTTTTTGCTGGCGGTGTCTGTTGAGTGGCTGTCTCGTTGGCGGCTGATGACCGAGATGGGGCCGAGAAATTTCGCCGCTGGGATCGTGCAGACGGCGGTGCATGGGGTTAGAATTGGAATTGCGTACATGGTTATGCTTGCTTTGATGTCGTTCAACGGCGGCGTTTTTATCGCTGCCATCGCCGGTCATTCATTTGGGTTTCTGATTTTTGGGAGCAGAGTCTTGAACAACACGAAATCAAAGCCGTACGATCAGGGTACGGCCGATCTTCCATCTGGGGTTTGCTGA

Coding sequence (CDS)

ATGCACTCCGACCCTCCGCCGCCGCCGATGGCTCCGATGAGCGGCGGCTCCGACGACGACATGCACTCTCACGGGATGCCGTCGTCATCAGGCATGACGATGATGCACATGACATTCTTCTGGGGAAAAAACACCCAAGTTTTATTCTCCGGCTGGCCGGGCAACCAGTCCGGCATGTATGCGCTGGCGTTGATATTGGTGTTTTTGCTGGCGGTGTCTGTTGAGTGGCTGTCTCGTTGGCGGCTGATGACCGAGATGGGGCCGAGAAATTTCGCCGCTGGGATCGTGCAGACGGCGGTGCATGGGGTTAGAATTGGAATTGCGTACATGGTTATGCTTGCTTTGATGTCGTTCAACGGCGGCGTTTTTATCGCTGCCATCGCCGGTCATTCATTTGGGTTTCTGATTTTTGGGAGCAGAGTCTTGAACAACACGAAATCAAAGCCGTACGATCAGGGTACGGCCGATCTTCCATCTGGGGTTTGCTGA

Protein sequence

MHSDPPPPPMAPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMYALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNGGVFIAAIAGHSFGFLIFGSRVLNNTKSKPYDQGTADLPSGVC

Homology

[Close]

BLAST of Cp4.1LG02g11510 vs. ExPASy Swiss-Prot
Match: Q9STG2 (Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 6.2e-37
Identity = 88/164 (53.66%), Postives = 106/164 (64.63%), Query Frame = 0


Query: 1   MHSDPPPPPMAPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 60
           MH  PPP P       S   M +H  P    M MMHMTFFWGKNT+VLFSGWPG  SGMY
Sbjct: 6   MHDMPPPSP-------SSSSMSNHTTPH---MMMMHMTFFWGKNTEVLFSGWPGTSSGMY 65

Query: 61  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNG 120
           AL LI++FLLAV  EWL+   ++   G  N AAG+ QTAV+ ++ G++Y+VMLA+MSFN 
Sbjct: 66  ALCLIVIFLLAVIAEWLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNA 125

Query: 121 GVFIAAIAGHSFGFLIFGSRVLNNTKSKPYDQGTADL--PSGVC 163
           GVFI AIAG+  GF +FGS      K    DQ TA+L  PS  C
Sbjct: 126 GVFIVAIAGYGVGFFLFGSTTF---KKPSDDQKTAELLPPSSGC 156

[Close]

BLAST of Cp4.1LG02g11510 vs. ExPASy Swiss-Prot
Match: Q8GWP3 (Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.5e-35
Identity = 80/147 (54.42%), Postives = 103/147 (70.07%), Query Frame = 0


Query: 8   PPMAPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMYALALILV 67
           PP +P S      M +H   ++S M MMHMTFFWGKNT++LFSGWPG   GMY L LI+V
Sbjct: 7   PPSSPSS------MVNH---TNSNMIMMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVV 66

Query: 68  FLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNGGVFIAAI 127
           FLLAV VEWL+   ++   G  + A G+VQTAV+ ++ G+AY+VMLA+MSFNGGVFI AI
Sbjct: 67  FLLAVIVEWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAI 126

Query: 128 AGHSFGFLIFGSRVLNNTK--SKPYDQ 153
           AG + GF++FGS    N     KP++Q
Sbjct: 127 AGFAVGFMLFGSTAFKNPSDDEKPFEQ 144

[Close]

BLAST of Cp4.1LG02g11510 vs. ExPASy Swiss-Prot
Match: Q39065 (Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2)

HSP 1 Score: 148.7 bits (374), Expect = 5.8e-35
Identity = 85/169 (50.30%), Postives = 108/169 (63.91%), Query Frame = 0


Query: 1   MHSDPPPPPMAPMSGGSDDDMHSHGMPSSSG-----MTMMHMTFFWGKNTQVLFSGWPGN 60
           MH  P P   +  S  S   M ++G  +  G       MMHMTFFWGKNT+VLFSGWPG 
Sbjct: 6   MHGMPRP---SSSSSSSPSSMMNNGSMNEGGGHHHMKMMMHMTFFWGKNTEVLFSGWPGT 65

Query: 61  QSGMYALALILVFLLAVSVEWLSRWRLM--TEMGPRNFAAGIVQTAVHGVRIGIAYMVML 120
            SGMYAL LI VF LAV  EWL+   L+  +     N AAG++QTAV+ +RIG+AY+VML
Sbjct: 66  SSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSANRAAGLIQTAVYTLRIGLAYLVML 125

Query: 121 ALMSFNGGVFIAAIAGHSFGFLIFGSRVLNNTKSKPYDQGTADLPSGVC 163
           A+MSFN GVF+ A+AGH+ GF++FGS+   NT     D+ T  +P   C
Sbjct: 126 AVMSFNAGVFLVALAGHAVGFMLFGSQTFRNTSD---DRKTNYVPPSGC 168

[Close]

BLAST of Cp4.1LG02g11510 vs. ExPASy Swiss-Prot
Match: Q60EN8 (Copper transporter 2 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT2 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.1e-28
Identity = 65/128 (50.78%), Postives = 89/128 (69.53%), Query Frame = 0


Query: 35  MHMTFFWGKNTQVLFSGWPGNQSGMYALALILVFLLAVSVEW----LSRWRLMTEMGPRN 94
           MHMTFFWGKNT+VLF+ WPG + GMYALA++ +F LAV +E+    +   RL     PR 
Sbjct: 23  MHMTFFWGKNTEVLFTLWPGARGGMYALAILFMFALAVLLEFRGYRVLEARLARRRAPR- 82

Query: 95  FAAGIVQTAVHGVRIGIAYMVMLALMSFNGGVFIAAIAGHSFGFLIFGSRVLNNTKSKPY 154
            AA  ++TAVH VR+G+AY++MLALMSFNGGVF+A +AGH+ GFL F + +     + P 
Sbjct: 83  -AAAALRTAVHAVRVGVAYLIMLALMSFNGGVFLAIVAGHAAGFLAFRAGLCGGGPAPPL 142

Query: 155 DQGTADLP 159
           ++   + P
Sbjct: 143 EEDRKNDP 148

[Close]

BLAST of Cp4.1LG02g11510 vs. ExPASy Swiss-Prot
Match: Q94EE4 (Copper transporter 1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT1 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 9.0e-28
Identity = 67/117 (57.26%), Postives = 84/117 (71.79%), Query Frame = 0


Query: 25  GMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMYALALILVFLLAVSVEWLSRWR--- 84
           GM +   M   HMTFFWGKN++VLF+ WPG + GMYALALI VF LAV VE+L   R   
Sbjct: 23  GMGAMKSMRYTHMTFFWGKNSEVLFTMWPGTRGGMYALALIFVFALAVIVEFLGSRRADA 82

Query: 85  LMTEMGPRNFAA-GIVQTAVHGVRIGIAYMVMLALMSFNGGVFIAAIAGHSFGFLIF 138
            +  +  R  AA G+ + AVH VR+G+AY++MLALMSFNGGVF+ A+AGH+ GFL F
Sbjct: 83  CLAALARRAPAAGGLARAAVHTVRVGVAYLLMLALMSFNGGVFLVAVAGHAAGFLAF 139

[Close]

BLAST of Cp4.1LG02g11510 vs. NCBI nr
Match: XP_023525857.1 (copper transporter 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327 bits (839), Expect = 1.50e-112
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MHSDPPPPPMAPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 60
           MHSDPPPPPMAPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY
Sbjct: 34  MHSDPPPPPMAPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 93

Query: 61  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNG 120
           ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNG
Sbjct: 94  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNG 153

Query: 121 GVFIAAIAGHSFGFLIFGSRVLNNTKSKPYDQGTADLPSGVC 162
           GVFIAAIAGHSFGFLIFGSRVLNNTKSKPYDQGTADLPSGVC
Sbjct: 154 GVFIAAIAGHSFGFLIFGSRVLNNTKSKPYDQGTADLPSGVC 195

[Close]

BLAST of Cp4.1LG02g11510 vs. NCBI nr
Match: KAG6607277.1 (Copper transporter 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 322 bits (824), Expect = 9.20e-111
Identity = 158/162 (97.53%), Postives = 160/162 (98.77%), Query Frame = 0


Query: 1   MHSDPPPPPMAPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 60
           MHSDPPPPPM PMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY
Sbjct: 1   MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 60

Query: 61  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNG 120
           ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAY+VMLALMSFNG
Sbjct: 61  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYLVMLALMSFNG 120

Query: 121 GVFIAAIAGHSFGFLIFGSRVLNNTKSKPYDQGTADLPSGVC 162
           GVFIAAIAGHSFGFLIFGSRV+NNTKSKPY QGTADLPSGVC
Sbjct: 121 GVFIAAIAGHSFGFLIFGSRVMNNTKSKPYQQGTADLPSGVC 162

[Close]

BLAST of Cp4.1LG02g11510 vs. NCBI nr
Match: XP_022948632.1 (copper transporter 6-like [Cucurbita moschata])

HSP 1 Score: 322 bits (824), Expect = 2.91e-110
Identity = 158/162 (97.53%), Postives = 160/162 (98.77%), Query Frame = 0


Query: 1   MHSDPPPPPMAPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 60
           MHSDPPPPPM PMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY
Sbjct: 34  MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 93

Query: 61  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNG 120
           ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAY+VMLALMSFNG
Sbjct: 94  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYLVMLALMSFNG 153

Query: 121 GVFIAAIAGHSFGFLIFGSRVLNNTKSKPYDQGTADLPSGVC 162
           GVFIAAIAGHSFGFLIFGSRV+NNTKSKPY QGTADLPSGVC
Sbjct: 154 GVFIAAIAGHSFGFLIFGSRVMNNTKSKPYQQGTADLPSGVC 195

[Close]

BLAST of Cp4.1LG02g11510 vs. NCBI nr
Match: XP_022998908.1 (copper transporter 6-like [Cucurbita maxima])

HSP 1 Score: 319 bits (818), Expect = 2.39e-109
Identity = 158/162 (97.53%), Postives = 158/162 (97.53%), Query Frame = 0


Query: 1   MHSDPPPPPMAPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 60
           MHSDPPPPPM PMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY
Sbjct: 34  MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 93

Query: 61  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNG 120
           ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNG
Sbjct: 94  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNG 153

Query: 121 GVFIAAIAGHSFGFLIFGSRVLNNTKSKPYDQGTADLPSGVC 162
           GVFIAAIAGHSFGFLIFGSRV  NTKSKPYD GTADLPSGVC
Sbjct: 154 GVFIAAIAGHSFGFLIFGSRVTKNTKSKPYDPGTADLPSGVC 195

[Close]

BLAST of Cp4.1LG02g11510 vs. NCBI nr
Match: KAG7036955.1 (Copper transporter 6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 317 bits (813), Expect = 4.75e-107
Identity = 157/162 (96.91%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 1   MHSDPPPPPMAPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 60
           MHSDPPPPPM PMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY
Sbjct: 137 MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 196

Query: 61  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNG 120
           ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNG
Sbjct: 197 ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNG 256

Query: 121 GVFIAAIAGHSFGFLIFGSRVLNNTKSKPYDQGTADLPSGVC 162
           GVFIAAIAGHSFGFLIFGSRV  NT SKPYDQ TADLPSGVC
Sbjct: 257 GVFIAAIAGHSFGFLIFGSRVTKNTNSKPYDQSTADLPSGVC 298

[Close]

BLAST of Cp4.1LG02g11510 vs. ExPASy TrEMBL
Match: A0A6J1G9S4 (Copper transporter OS=Cucurbita moschata OX=3662 GN=LOC111452254 PE=3 SV=1)

HSP 1 Score: 322 bits (824), Expect = 1.41e-110
Identity = 158/162 (97.53%), Postives = 160/162 (98.77%), Query Frame = 0


Query: 1   MHSDPPPPPMAPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 60
           MHSDPPPPPM PMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY
Sbjct: 34  MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 93

Query: 61  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNG 120
           ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAY+VMLALMSFNG
Sbjct: 94  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYLVMLALMSFNG 153

Query: 121 GVFIAAIAGHSFGFLIFGSRVLNNTKSKPYDQGTADLPSGVC 162
           GVFIAAIAGHSFGFLIFGSRV+NNTKSKPY QGTADLPSGVC
Sbjct: 154 GVFIAAIAGHSFGFLIFGSRVMNNTKSKPYQQGTADLPSGVC 195

[Close]

BLAST of Cp4.1LG02g11510 vs. ExPASy TrEMBL
Match: A0A6J1KI42 (Copper transporter OS=Cucurbita maxima OX=3661 GN=LOC111493431 PE=3 SV=1)

HSP 1 Score: 319 bits (818), Expect = 1.16e-109
Identity = 158/162 (97.53%), Postives = 158/162 (97.53%), Query Frame = 0


Query: 1   MHSDPPPPPMAPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 60
           MHSDPPPPPM PMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY
Sbjct: 34  MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 93

Query: 61  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNG 120
           ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNG
Sbjct: 94  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNG 153

Query: 121 GVFIAAIAGHSFGFLIFGSRVLNNTKSKPYDQGTADLPSGVC 162
           GVFIAAIAGHSFGFLIFGSRV  NTKSKPYD GTADLPSGVC
Sbjct: 154 GVFIAAIAGHSFGFLIFGSRVTKNTKSKPYDPGTADLPSGVC 195

[Close]

BLAST of Cp4.1LG02g11510 vs. ExPASy TrEMBL
Match: A0A0A0LY50 (Copper transporter OS=Cucumis sativus OX=3659 GN=Csa_1G526820 PE=3 SV=1)

HSP 1 Score: 251 bits (640), Expect = 1.42e-82
Identity = 123/162 (75.93%), Postives = 139/162 (85.80%), Query Frame = 0


Query: 1   MHSDPPPPPMAPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 60
           MH DPPPPP+AP S GS DDMH+H M SS+    MHMTFFWGKNTQVLFSGWPG++SGMY
Sbjct: 36  MHMDPPPPPIAPTSRGSGDDMHTHDMMSSA----MHMTFFWGKNTQVLFSGWPGDRSGMY 95

Query: 61  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNG 120
           A+AL+ VFLLAV+VEWLS WR+MTE+GPRN AAGIVQTAVHG+R+GIAY+VMLALMSFNG
Sbjct: 96  AVALVFVFLLAVAVEWLSCWRMMTEVGPRNVAAGIVQTAVHGIRMGIAYLVMLALMSFNG 155

Query: 121 GVFIAAIAGHSFGFLIFGSRVLNNTKSKPYDQGTADLPSGVC 162
           GVFI A+AGH  GFL+FGSRV+   KS  YDQGT DLPS VC
Sbjct: 156 GVFIVAVAGHMVGFLVFGSRVVKKEKSSAYDQGTVDLPSRVC 193

[Close]

BLAST of Cp4.1LG02g11510 vs. ExPASy TrEMBL
Match: A0A5D3BDI0 (Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001740 PE=3 SV=1)

HSP 1 Score: 244 bits (622), Expect = 2.41e-80
Identity = 120/162 (74.07%), Postives = 137/162 (84.57%), Query Frame = 0


Query: 1   MHSDPPPPPMAPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 60
           MH D PPPPM+P S GS DD+H+H M S +    MHMTFFWGKNTQVLFSGWPG++SGMY
Sbjct: 1   MHMDSPPPPMSPTSRGSGDDLHTHDMMSPA----MHMTFFWGKNTQVLFSGWPGDRSGMY 60

Query: 61  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNG 120
           A+AL+ VFLLAV+VEWLS WR+MTE GPRN AAGIVQTAVHG+R+GIAY+VMLALMSFNG
Sbjct: 61  AVALVFVFLLAVAVEWLSCWRVMTEAGPRNVAAGIVQTAVHGIRMGIAYLVMLALMSFNG 120

Query: 121 GVFIAAIAGHSFGFLIFGSRVLNNTKSKPYDQGTADLPSGVC 162
           GVFI A+AGH  GFL+FGSRV+   KS  YDQG+ADLPS VC
Sbjct: 121 GVFIVAVAGHMVGFLVFGSRVVKKEKSSAYDQGSADLPSRVC 158

[Close]

BLAST of Cp4.1LG02g11510 vs. ExPASy TrEMBL
Match: A0A1S3C5H1 (Copper transporter OS=Cucumis melo OX=3656 GN=LOC103497119 PE=3 SV=1)

HSP 1 Score: 244 bits (622), Expect = 7.54e-80
Identity = 120/162 (74.07%), Postives = 137/162 (84.57%), Query Frame = 0


Query: 1   MHSDPPPPPMAPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 60
           MH D PPPPM+P S GS DD+H+H M S +    MHMTFFWGKNTQVLFSGWPG++SGMY
Sbjct: 35  MHMDSPPPPMSPTSRGSGDDLHTHDMMSPA----MHMTFFWGKNTQVLFSGWPGDRSGMY 94

Query: 61  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNG 120
           A+AL+ VFLLAV+VEWLS WR+MTE GPRN AAGIVQTAVHG+R+GIAY+VMLALMSFNG
Sbjct: 95  AVALVFVFLLAVAVEWLSCWRVMTEAGPRNVAAGIVQTAVHGIRMGIAYLVMLALMSFNG 154

Query: 121 GVFIAAIAGHSFGFLIFGSRVLNNTKSKPYDQGTADLPSGVC 162
           GVFI A+AGH  GFL+FGSRV+   KS  YDQG+ADLPS VC
Sbjct: 155 GVFIVAVAGHMVGFLVFGSRVVKKEKSSAYDQGSADLPSRVC 192

[Close]

BLAST of Cp4.1LG02g11510 vs. TAIR 10
Match: AT3G46900.1 (copper transporter 2 )

HSP 1 Score: 155.2 bits (391), Expect = 4.4e-38
Identity = 88/164 (53.66%), Postives = 106/164 (64.63%), Query Frame = 0


Query: 1   MHSDPPPPPMAPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 60
           MH  PPP P       S   M +H  P    M MMHMTFFWGKNT+VLFSGWPG  SGMY
Sbjct: 6   MHDMPPPSP-------SSSSMSNHTTPH---MMMMHMTFFWGKNTEVLFSGWPGTSSGMY 65

Query: 61  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNG 120
           AL LI++FLLAV  EWL+   ++   G  N AAG+ QTAV+ ++ G++Y+VMLA+MSFN 
Sbjct: 66  ALCLIVIFLLAVIAEWLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNA 125

Query: 121 GVFIAAIAGHSFGFLIFGSRVLNNTKSKPYDQGTADL--PSGVC 163
           GVFI AIAG+  GF +FGS      K    DQ TA+L  PS  C
Sbjct: 126 GVFIVAIAGYGVGFFLFGSTTF---KKPSDDQKTAELLPPSSGC 156

[Close]

BLAST of Cp4.1LG02g11510 vs. TAIR 10
Match: AT2G26975.1 (Ctr copper transporter family )

HSP 1 Score: 150.6 bits (379), Expect = 1.1e-36
Identity = 80/147 (54.42%), Postives = 103/147 (70.07%), Query Frame = 0


Query: 8   PPMAPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMYALALILV 67
           PP +P S      M +H   ++S M MMHMTFFWGKNT++LFSGWPG   GMY L LI+V
Sbjct: 7   PPSSPSS------MVNH---TNSNMIMMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVV 66

Query: 68  FLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNGGVFIAAI 127
           FLLAV VEWL+   ++   G  + A G+VQTAV+ ++ G+AY+VMLA+MSFNGGVFI AI
Sbjct: 67  FLLAVIVEWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAI 126

Query: 128 AGHSFGFLIFGSRVLNNTK--SKPYDQ 153
           AG + GF++FGS    N     KP++Q
Sbjct: 127 AGFAVGFMLFGSTAFKNPSDDEKPFEQ 144

[Close]

BLAST of Cp4.1LG02g11510 vs. TAIR 10
Match: AT5G59030.1 (copper transporter 1 )

HSP 1 Score: 148.7 bits (374), Expect = 4.1e-36
Identity = 85/169 (50.30%), Postives = 108/169 (63.91%), Query Frame = 0


Query: 1   MHSDPPPPPMAPMSGGSDDDMHSHGMPSSSG-----MTMMHMTFFWGKNTQVLFSGWPGN 60
           MH  P P   +  S  S   M ++G  +  G       MMHMTFFWGKNT+VLFSGWPG 
Sbjct: 6   MHGMPRP---SSSSSSSPSSMMNNGSMNEGGGHHHMKMMMHMTFFWGKNTEVLFSGWPGT 65

Query: 61  QSGMYALALILVFLLAVSVEWLSRWRLM--TEMGPRNFAAGIVQTAVHGVRIGIAYMVML 120
            SGMYAL LI VF LAV  EWL+   L+  +     N AAG++QTAV+ +RIG+AY+VML
Sbjct: 66  SSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSANRAAGLIQTAVYTLRIGLAYLVML 125

Query: 121 ALMSFNGGVFIAAIAGHSFGFLIFGSRVLNNTKSKPYDQGTADLPSGVC 163
           A+MSFN GVF+ A+AGH+ GF++FGS+   NT     D+ T  +P   C
Sbjct: 126 AVMSFNAGVFLVALAGHAVGFMLFGSQTFRNTSD---DRKTNYVPPSGC 168

[Close]

BLAST of Cp4.1LG02g11510 vs. TAIR 10
Match: AT5G59040.1 (copper transporter 3 )

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-28
Identity = 69/150 (46.00%), Postives = 90/150 (60.00%), Query Frame = 0


Query: 3   SDPPPPPMAPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMYAL 62
           S   P   AP         H HG        MMHMTFFWGK T+VLF GWPG    MY +
Sbjct: 5   SGSSPAAPAPSPSSFFQHRHRHG-------GMMHMTFFWGKTTEVLFDGWPGTSLKMYWV 64

Query: 63  ALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNGGV 122
            L ++F+++   E LSR   M + GP +   G++QTAV+ VR  ++Y+VMLA+MSFNGGV
Sbjct: 65  CLAVIFVISAFSECLSRCGFM-KSGPASLGGGLLQTAVYTVRAALSYLVMLAVMSFNGGV 124

Query: 123 FIAAIAGHSFGFLIFGSRVLNNTKSKPYDQ 153
           F+AA+AG   GF+IFGSR    T S  + +
Sbjct: 125 FVAAMAGFGLGFMIFGSRAFRATSSNSHTE 146

[Close]

BLAST of Cp4.1LG02g11510 vs. TAIR 10
Match: AT2G37925.1 (copper transporter 4 )

HSP 1 Score: 115.5 bits (288), Expect = 3.9e-26
Identity = 58/114 (50.88%), Postives = 77/114 (67.54%), Query Frame = 0


Query: 33  TMMHMTFFWGKNTQVLFSGWPGNQSGMYALALILVFLLAVSVEWLSRW--RLMTEMGPRN 92
           +++H TF+WG N QVLFSGWPG+  GMYALALI VF LA   EWL+R       + G   
Sbjct: 28  SLLHPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARCSDASSIKQGADK 87

Query: 93  FAAGIVQTAVHGVRIGIAYMVMLALMSFNGGVFIAAIAGHSFGFLIFGSRVLNN 145
            A    +TA++ V+ G +Y+V+LA++SFNGGVF+AAI GH+ GF +F  R   N
Sbjct: 88  LAKVAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVFRGRAFRN 141

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g11510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STG2	6.2e-37	53.66	Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1	[more]
Q8GWP3	1.5e-35	54.42	Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1	[more]
Q39065	5.8e-35	50.30	Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2	[more]
Q60EN8	3.1e-28	50.78	Copper transporter 2 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT2 PE=1 SV=1	[more]
Q94EE4	9.0e-28	57.26	Copper transporter 1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT1 PE=2 SV=1	[more]

BLAST of Cp4.1LG02g11510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023525857.1	1.50e-112	100.00	copper transporter 6-like [Cucurbita pepo subsp. pepo]	[more]
KAG6607277.1	9.20e-111	97.53	Copper transporter 6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022948632.1	2.91e-110	97.53	copper transporter 6-like [Cucurbita moschata]	[more]
XP_022998908.1	2.39e-109	97.53	copper transporter 6-like [Cucurbita maxima]	[more]
KAG7036955.1	4.75e-107	96.91	Copper transporter 6 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cp4.1LG02g11510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G9S4	1.41e-110	97.53	Copper transporter OS=Cucurbita moschata OX=3662 GN=LOC111452254 PE=3 SV=1	[more]
A0A6J1KI42	1.16e-109	97.53	Copper transporter OS=Cucurbita maxima OX=3661 GN=LOC111493431 PE=3 SV=1	[more]
A0A0A0LY50	1.42e-82	75.93	Copper transporter OS=Cucumis sativus OX=3659 GN=Csa_1G526820 PE=3 SV=1	[more]
A0A5D3BDI0	2.41e-80	74.07	Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G0...	[more]
A0A1S3C5H1	7.54e-80	74.07	Copper transporter OS=Cucumis melo OX=3656 GN=LOC103497119 PE=3 SV=1	[more]

BLAST of Cp4.1LG02g11510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46900.1	4.4e-38	53.66	copper transporter 2	[more]
AT2G26975.1	1.1e-36	54.42	Ctr copper transporter family	[more]
AT5G59030.1	4.1e-36	50.30	copper transporter 1	[more]
AT5G59040.1	1.1e-28	46.00	copper transporter 3	[more]
AT2G37925.1	3.9e-26	50.88	copper transporter 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007274	Ctr copper transporter	PFAM	PF04145	Ctr	coord: 91..137 e-value: 1.2E-9 score: 38.9 coord: 37..84 e-value: 1.0E-8 score: 35.9
IPR007274	Ctr copper transporter	PANTHER	PTHR12483	SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS	coord: 21..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR12483:SF100	SUBFAMILY NOT NAMED	coord: 21..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g11510.1	Cp4.1LG02g11510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006878	cellular copper ion homeostasis
biological_process	GO:0035434	copper ion transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005375	copper ion transmembrane transporter activity