Cp4.1LG02g11470 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g11470
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Zinc finger CCCH domain-containing protein
Location	Cp4.1LG02: 10459531 .. 10464075 (+)
RNA-Seq Expression	Cp4.1LG02g11470
Synteny	Cp4.1LG02g11470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATGGGCTCTGGGCGATCATTCAGTTTGAAGGCTCACTTATTGATTGAGGGACTTCCGAAGAGTTGATTGATTCCTTTGCAGTCCTACTCAAGGGAGCCAAAACAGAGTCGAGTTCCACACGAATTCTCCATGGCGCATCGGTTGCTGAGGGATCTGGAAGCTGATGGATGGGAGCGCTCCGATTTCCCCATCATCTGCGAGTCTTGCCTTGGTGATAACCCCTATGTTCGCATGGTATGTTTGTTCTTCTATCTTCTCTAAGTTTAGTACTCCCAACCCCTCGAGTTACTTCGAACCCGTCCTTGAATTGCGTTCCTAAGTTCACAATTGATCACATGAATGTTCGAATAAGTCCTTCTCGAACTGTTCTGTTCGTGTAATNACAATTGATCACATAAATGTTCGAATAAGTCCTTCTCGAACTGTTCTGTTCGTGTAATTACCGTCAATTGATGTCCCGTTTGAACATAGATCCAGATGGTTTCTGTTAACTGTTTATGATTTTTATATACTCACTAGCATGAAATATGTGGGGGAGTAAGGGATGGTGGTTACTGGAGTTGTTCTCTTTTGCAATTCATGCTTAGTCTTTGCTTTAGACATTATTTTGATTAAATGAATGCGATATCTGAATGCAGACGAAAGCTGATTATGACAAAGAATGCAAAATTTGCACGCGACCATTTACAGTNGCTCTTTTGCAATTCATGCTTAATCTTTGCTTTAGACATTATTTTGATTAAATGAATGCGATATCTGAATGCAGACGAAAGCTGATTATGACAAAGAATGCAAAATTTGCACGCGACCATTTACAGTTTTCAGGTGGAGACCTGGACGCGATGCCAGATATAAGAAATCTGAGATTTGCCAGACTTGCAGTAAGTTAAAAAATGTATGTCAAGTTTGCCTTTTGGACCTTGAATATGGCTTACCAGTTCAGGTTCGAGATACTGCCCTGTCTATCAACTCCAACGATTCTATTCCTAAGAGCGATGTGAATAGGGAATATTTTGCCGAGGAGCATGATCGGAAGGTATGCACTTTCTGCTAAGTATTTCCTCTAGTTATTGGATGATTAGTCCTTGCAGTTGTTGGTGCAATCTCTTGGAATGTTAAGGGAAAAGCATTATGATAGCCAACCATCTTAGCCACTATGATAAGCCTTGATGGACATAGATATGGCTAATACTAATAGCATGGTAAAAACTAAACTGTCGGATTGTTTTGATTGCTTAACATAAATAACTTTTGCCTTATTAGACATGATTTCCAATTTTCGATTTTCTTGAAAAGAAGTTGAGCTTATTTCTTTCCTTATTGAAAAAATTGTCAGTTTTTTTTTGTTGTTCTGGATCATGCTTCGTACATCTTTTTCAGACCTAATAAGTGTTTTTTACTTTAGATTCTTTGTTGTTCTGGATCATGTTTTTCAGACCTAATAAGTGTTTTTTTGTTGTTCTGGATCATGTTCTGGATCAATTAATTTATANACTTTACCTAATAAGTGTTTTTCAGACCTAATAAGTGTTTTTTTGTTGTTCTGGATCATGTTCTGGATCAATTAATTTATATCAGACCTAATAAGTGTTTTTTACTTTAGATTCTTTTTCTTTGTTAGTCACACTTTCTGTGTACTTTTGCGCAAGTGGATTGAAAAATGTTAGTAATAAAGGTGGGCATATTTGGCAAATGTTCTTGATTTCAATCAAGATTGTGGGCATATGGATTTAAAATCTGAATGTTATTGGGTCAAACATACTCTATATAACGGACATCCATGTTCTGCTGAAGTGTATGGATGAAATGTTGTTTTCTCTCTCACTTTCATCTTCGCGGCAAATTAATATTAATATTTAATATAATGAAGCATGGCCGTTTAAAGNTGCGACAAATTAATATTAATATTAATATTTAATATAATGAAGCATGGCCGTTTAAAGGAATGGGATCTTAATTTCCTTGAACAGTGGAGGATAAAAATTTAACAAAGAAATATTAGATACCTGAGGAGGAATGTGATTTTATTCCTTTGAAGAGGAGATAATTTGAGAAAATTGATAAAAGCTATTGAATTTAATTAGATGGCCATGGATGTGCACCATAAAAGTATCCTATGTGGCATTTGATTTGTTTTATAATTTTTACATATTCAATGAATTAAATATGATTGCTGTAGCAGGTCTTTGCAGCTCTGTTGTTGCTAACTTGGATTTTGCTAATTCAGTTGAATGTTGACCATGCAGGCTAGAGCTGGTATTGATTATGAGTCCTCCTTTGGAAAGGCTCGGCCAAACGATACTATTCTGAAACTTCAACGAACTACCCCCTATTACAAGAGGAACCGTGCACATGTTTGTAGTTTTTATATTAGGGGTGAATGTACTAGAGGTTCGGAATGCCCTTACAGACATGAGATGCCTGAAACTGGAGAGTTGTCCCAGCAAAATATTAAGGATCGTTATTATGGGTATGATTGATCTTTTCCTTTCGAATGATTAGTTGTTGTGTGTCCGATCTTAGTCCCTGACCACCCAAATTTTCTATGCTTTTTCATGNCTATGGGTATGGATGATCTTTTTTCTTTTGAATGATTAATTGTTGTGTGTCTGATCTTAGTCCCTGACCACCCAAATTTTCTATGCTTTTTCATGGTCACCATCTTGCATTTGTTACATATCTTAAGCTTCGTTTCAGCTTTACATCATATGAAATATAGTCTTCCCATAGTTATTATTTATTGGAACAGAGATGATTGCTCAGTTTTTCATATGCAATTAATTGNACATCTTGCATTTGTTACATATCTTAAGCTTCGTTTCAGCTTTATATCATATGAAATATAGTCTTCCTATAGTTATTATTTATTGGAACAGAGATGATTGTTCTGGAACAGAGATGATTGCTCAGTTTTTCATATGCAATTAATTGATCAGTGGCTATTTAAATTAGTATTTACTATTTTGTGGTGAGTTGAGTTGTATTTCAAAAGATGTGACGTTGAAATACATATTTTGTCCGCCTTTGACATCTCAACCTTGTAANGAAAGATGTGACATTGAAATACATATTTTGTCCGCCTTTGACATCTCAACCTTGTAATCCCCTTGGCCCTTGTTGGGTTGAATCTCATCACCCTTTATATCTTTTGTTCTATTCATGAAGTTTTATTTTCCTATCAAGTTTTTCCCCTTGGCCATTATAAAACCGAAATAGACGACTGAGCTATATTTCATTCTCACAGTTCGGTTTCTATTTGCAAGAATGTTAAAAGTCGCAGTTATCACGTATATTTTTCTAGACTAGCCACATTTTATTTTTGTCATTCGGAATTTACAGAGATAATTGCTAATGAGGTTACTTTCCTTTCGAACTCCTCAGGGTTAACGATCCAGTTGCACTGAAGCTTCTTAACAAGGCTGGAGAGATGCCTTCTCTGGAACCTCCAGAGGATGAGAGTATTAGAACCTTGTATGTGGGTGGTCTTGATGCTCGAGTCACCGAACAAGATCTTCGTGATAACTTTTATGCTCATGGTGAAATTGAATCCATCAGAATGGTGCTACAGCGGGCATGTGCTTTTGTGACCTACACCACCAGGGAAGGTGCAGAGAAGGCTGCAGGAGAGCTTTCTAACAAGCTGGTAGTAAAGGGCCTTAGGCTGAAATTGATGTGGGGTAGACCTCAAGCACCAAAACCAGAGTCGGAGGGTTCTGATGAAGCAAAGCAAGCAGCAGTGGCTCACAGTGGAATGCTGCCGCGGGCCGTTATCTCGCAGCAGCACAGCCAATTACACCCTCCGGGAACGCATGATCAACCTCAACCTATGCACTACTACAATATGCCGCCACCACCACCTCAGCAGGAGAGAGCATTCTATCCCTCAATGGACCCTCAAAGAATGGGAGCTTTGATTTCGACTCATGATTCGGGGGCACCCCATAGCGGACCTGCTAGTTCAACAGAAGCTAGACCCGGTTCGGAGAAACAACACCAGCAGGGACATCAATATCCATATCACGCAATGCACCCACCACCACCACATGCACAATATCAACAGCAATTTTATCCGCCATATGGGTATGTGCAGCAACATTATCCACAATACCCTCCTTATCATTCGAACATGCCACCCCCACCCCAGCCCCAGCCTCAGCCCCAGCCCCCTCCAGGTAGCCATCAATACCAGCAGCATTCTGCACCACAAGGCTCTGCCCCTCAGTCGCAAGGAGGAGCATCTTCAGGTTCAGCACCGCTGGGATCGACGCCTTCAGCATCTGCTCCATCTTCAACTTCTTCTGAACCTGCATCATCATAGATTAGGTCTCCGACGACAAGTCTGGCTGTTGGATGGGGAGGCGCGGGGCCTCTTTGTTGTTATATCGTTCCTATGCTGTCATGTCTTCATTATGTAATATGACACTCTTTTTACTTGAGAATGAGCAATTTGGATTCACTGCTTCCATTCCTTTGTCTGTTTTGAGTCCAAGTCCTTTGTTGTTAGTTTAGTCTAAACGAAATAGAAGTGAAATTCCTGTGTTACA

mRNA sequence

GATGGGCTCTGGGCGATCATTCAGTTTGAAGGCTCACTTATTGATTGAGGGACTTCCGAAGAGTTGATTGATTCCTTTGCAGTCCTACTCAAGGGAGCCAAAACAGAGTCGAGTTCCACACGAATTCTCCATGGCGCATCGGTTGCTGAGGGATCTGGAAGCTGATGGATGGGAGCGCTCCGATTTCCCCATCATCTGCGAGTCTTGCCTTGGTGATAACCCCTATGTTCGCATGACGAAAGCTGATTATGACAAAGAATGCAAAATTTGCACGCGACCATTTACAGTTTTCAGGTGGAGACCTGGACGCGATGCCAGATATAAGAAATCTGAGATTTGCCAGACTTGCAGTAAGTTAAAAAATGTATGTCAAGTTTGCCTTTTGGACCTTGAATATGGCTTACCAGTTCAGGTTCGAGATACTGCCCTGTCTATCAACTCCAACGATTCTATTCCTAAGAGCGATGTGAATAGGGAATATTTTGCCGAGGAGCATGATCGGAAGGCTAGAGCTGGTATTGATTATGAGTCCTCCTTTGGAAAGGCTCGGCCAAACGATACTATTCTGAAACTTCAACGAACTACCCCCTATTACAAGAGGAACCGTGCACATGTTTGTAGTTTTTATATTAGGGGTGAATGTACTAGAGGTTCGGAATGCCCTTACAGACATGAGATGCCTGAAACTGGAGAGTTGTCCCAGCAAAATATTAAGGATCGTTATTATGGGGTTAACGATCCAGTTGCACTGAAGCTTCTTAACAAGGCTGGAGAGATGCCTTCTCTGGAACCTCCAGAGGATGAGAGTATTAGAACCTTGTATGTGGGTGGTCTTGATGCTCGAGTCACCGAACAAGATCTTCGTGATAACTTTTATGCTCATGGTGAAATTGAATCCATCAGAATGGTGCTACAGCGGGCATGTGCTTTTGTGACCTACACCACCAGGGAAGGTGCAGAGAAGGCTGCAGGAGAGCTTTCTAACAAGCTGGTAGTAAAGGGCCTTAGGCTGAAATTGATGTGGGGTAGACCTCAAGCACCAAAACCAGAGTCGGAGGGTTCTGATGAAGCAAAGCAAGCAGCAGTGGCTCACAGTGGAATGCTGCCGCGGGCCGTTATCTCGCAGCAGCACAGCCAATTACACCCTCCGGGAACGCATGATCAACCTCAACCTATGCACTACTACAATATGCCGCCACCACCACCTCAGCAGGAGAGAGCATTCTATCCCTCAATGGACCCTCAAAGAATGGGAGCTTTGATTTCGACTCATGATTCGGGGGCACCCCATAGCGGACCTGCTAGTTCAACAGAAGCTAGACCCGGTTCGGAGAAACAACACCAGCAGGGACATCAATATCCATATCACGCAATGCACCCACCACCACCACATGCACAATATCAACAGCAATTTTATCCGCCATATGGGTATGTGCAGCAACATTATCCACAATACCCTCCTTATCATTCGAACATGCCACCCCCACCCCAGCCCCAGCCTCAGCCCCAGCCCCCTCCAGGTAGCCATCAATACCAGCAGCATTCTGCACCACAAGGCTCTGCCCCTCAGTCGCAAGGAGGAGCATCTTCAGGTTCAGCACCGCTGGGATCGACGCCTTCAGCATCTGCTCCATCTTCAACTTCTTCTGAACCTGCATCATCATAGATTAGGTCTCCGACGACAAGTCTGGCTGTTGGATGGGGAGGCGCGGGGCCTCTTTGTTGTTATATCGTTCCTATGCTGTCATGTCTTCATTATGTAATATGACACTCTTTTTACTTGAGAATGAGCAATTTGGATTCACTGCTTCCATTCCTTTGTCTGTTTTGAGTCCAAGTCCTTTGTTGTTAGTTTAGTCTAAACGAAATAGAAGTGAAATTCCTGTGTTACA

Coding sequence (CDS)

ATGGCGCATCGGTTGCTGAGGGATCTGGAAGCTGATGGATGGGAGCGCTCCGATTTCCCCATCATCTGCGAGTCTTGCCTTGGTGATAACCCCTATGTTCGCATGACGAAAGCTGATTATGACAAAGAATGCAAAATTTGCACGCGACCATTTACAGTTTTCAGGTGGAGACCTGGACGCGATGCCAGATATAAGAAATCTGAGATTTGCCAGACTTGCAGTAAGTTAAAAAATGTATGTCAAGTTTGCCTTTTGGACCTTGAATATGGCTTACCAGTTCAGGTTCGAGATACTGCCCTGTCTATCAACTCCAACGATTCTATTCCTAAGAGCGATGTGAATAGGGAATATTTTGCCGAGGAGCATGATCGGAAGGCTAGAGCTGGTATTGATTATGAGTCCTCCTTTGGAAAGGCTCGGCCAAACGATACTATTCTGAAACTTCAACGAACTACCCCCTATTACAAGAGGAACCGTGCACATGTTTGTAGTTTTTATATTAGGGGTGAATGTACTAGAGGTTCGGAATGCCCTTACAGACATGAGATGCCTGAAACTGGAGAGTTGTCCCAGCAAAATATTAAGGATCGTTATTATGGGGTTAACGATCCAGTTGCACTGAAGCTTCTTAACAAGGCTGGAGAGATGCCTTCTCTGGAACCTCCAGAGGATGAGAGTATTAGAACCTTGTATGTGGGTGGTCTTGATGCTCGAGTCACCGAACAAGATCTTCGTGATAACTTTTATGCTCATGGTGAAATTGAATCCATCAGAATGGTGCTACAGCGGGCATGTGCTTTTGTGACCTACACCACCAGGGAAGGTGCAGAGAAGGCTGCAGGAGAGCTTTCTAACAAGCTGGTAGTAAAGGGCCTTAGGCTGAAATTGATGTGGGGTAGACCTCAAGCACCAAAACCAGAGTCGGAGGGTTCTGATGAAGCAAAGCAAGCAGCAGTGGCTCACAGTGGAATGCTGCCGCGGGCCGTTATCTCGCAGCAGCACAGCCAATTACACCCTCCGGGAACGCATGATCAACCTCAACCTATGCACTACTACAATATGCCGCCACCACCACCTCAGCAGGAGAGAGCATTCTATCCCTCAATGGACCCTCAAAGAATGGGAGCTTTGATTTCGACTCATGATTCGGGGGCACCCCATAGCGGACCTGCTAGTTCAACAGAAGCTAGACCCGGTTCGGAGAAACAACACCAGCAGGGACATCAATATCCATATCACGCAATGCACCCACCACCACCACATGCACAATATCAACAGCAATTTTATCCGCCATATGGGTATGTGCAGCAACATTATCCACAATACCCTCCTTATCATTCGAACATGCCACCCCCACCCCAGCCCCAGCCTCAGCCCCAGCCCCCTCCAGGTAGCCATCAATACCAGCAGCATTCTGCACCACAAGGCTCTGCCCCTCAGTCGCAAGGAGGAGCATCTTCAGGTTCAGCACCGCTGGGATCGACGCCTTCAGCATCTGCTCCATCTTCAACTTCTTCTGAACCTGCATCATCATAG

Protein sequence

MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGRDARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAEEHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYRHEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVTEQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGRPQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHSQLHPPGTHDQPQPMHYYNMPPPPPQQERAFYPSMDPQRMGALISTHDSGAPHSGPASSTEARPGSEKQHQQGHQYPYHAMHPPPPHAQYQQQFYPPYGYVQQHYPQYPPYHSNMPPPPQPQPQPQPPPGSHQYQQHSAPQGSAPQSQGGASSGSAPLGSTPSASAPSSTSSEPASS

Homology

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BLAST of Cp4.1LG02g11470 vs. ExPASy Swiss-Prot
Match: Q5SNN4 (Zinc finger CCCH domain-containing protein 40 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0170500 PE=2 SV=1)

HSP 1 Score: 666.4 bits (1718), Expect = 2.6e-190
Identity = 356/496 (71.77%), Postives = 389/496 (78.43%), Query Frame = 0


Query: 1   MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60
           MAHRLLRD +ADGWERSDFPIICESCLGDNPYVRM +A+YDKECKIC RPFTVFRWRPGR
Sbjct: 1   MAHRLLRDAQADGWERSDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGR 60

Query: 61  DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 120
           DARYKK+EICQTC KLKNVCQVCLLDLEYGLPVQVRDTAL+INSND+IP+SDVNREYFAE
Sbjct: 61  DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDAIPRSDVNREYFAE 120

Query: 121 EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR 180
           EHDRKARAGIDY+SS GKARPNDTILKLQRT PYYKRNRAHVCSFY+RGECTRG+ECPYR
Sbjct: 121 EHDRKARAGIDYDSSHGKARPNDTILKLQRTAPYYKRNRAHVCSFYVRGECTRGAECPYR 180

Query: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT 240
           HEMPETGELSQQNIKDRYYGVNDPVALKLL KAGEMPSL PP+DESIRTLY+GGL+ R+T
Sbjct: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLGKAGEMPSLTPPDDESIRTLYIGGLNNRIT 240

Query: 241 EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGR 300
           EQDLRD FYAHGEIESIRMVLQRACAFVTYTTREGAEKAA EL+NKLV+KG+RLKLMWG+
Sbjct: 241 EQDLRDQFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAEELANKLVIKGIRLKLMWGK 300

Query: 301 PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHS--QLHPPGTHDQ---PQPMHYYNMP 360
           PQAPKPE +  +  +Q  VAH GMLPRAVISQQ S  Q  PPG   Q   P   +Y+N+ 
Sbjct: 301 PQAPKPEDD--EAGRQGHVAHGGMLPRAVISQQQSGDQPQPPGMEGQQQAPSGSYYFNI- 360

Query: 361 PPPPQQERAFYPSMDPQRMGALISTHDSGAPHSGPASSTEARPGSEKQHQQGHQYPYHAM 420
           P PP  ER  YPSMDPQRMGAL+ + + G    GP  + +A+  S      G  YP    
Sbjct: 361 PAPPGAERTLYPSMDPQRMGALVKSQE-GDGKPGPQQAAQAQASS----SSGQSYPM--- 420

Query: 421 HPPPPHAQYQQQFYPPYGYVQQHYPQYPPYHSNMPPPPQPQPQPQPPPGSHQYQQHSAPQ 480
              PP  QY    YPPY         YPPY   MPPP  P P   PPP   QY  +    
Sbjct: 421 ---PP--QYYHGQYPPY---------YPPYGGYMPPPRMPYP---PPP---QYPPYQPML 465

Query: 481 GSAPQSQGGASSGSAP 492
            +  QSQ  +S   AP
Sbjct: 481 ATPAQSQASSSQQPAP 465

[Close]

BLAST of Cp4.1LG02g11470 vs. ExPASy Swiss-Prot
Match: Q6Z358 (Zinc finger CCCH domain-containing protein 49 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0281000 PE=2 SV=1)

HSP 1 Score: 663.3 bits (1710), Expect = 2.2e-189
Identity = 354/498 (71.08%), Postives = 388/498 (77.91%), Query Frame = 0


Query: 1   MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60
           MAHRLLRD +ADGWERSDFPIICESCLGDNPYVRM +A+YDKECKIC RPFTVFRWRPGR
Sbjct: 1   MAHRLLRDAQADGWERSDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGR 60

Query: 61  DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 120
           DARYKK+EICQTC KLKNVCQVCLLDLEYGLPVQVRDTALS NSND+IP+SDVNREYFAE
Sbjct: 61  DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALSTNSNDAIPRSDVNREYFAE 120

Query: 121 EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR 180
           EHDR+ARAGIDY+SS GKAR NDTILKLQRT PYYKRNRAHVCSFY+RGECTRG+ECPYR
Sbjct: 121 EHDRRARAGIDYDSSNGKARANDTILKLQRTAPYYKRNRAHVCSFYVRGECTRGAECPYR 180

Query: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT 240
           HEMPETGELSQQNIKDRYYGVNDPVALKLL+KAGEMPSL PP+DESIRTLY+GGLD+RVT
Sbjct: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLSKAGEMPSLTPPDDESIRTLYIGGLDSRVT 240

Query: 241 EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGR 300
           EQDLRD FYAHGEIE+IRMVLQRACAFVTYTTREGAEKAA EL+NKLV+KG+RLKLMWG+
Sbjct: 241 EQDLRDQFYAHGEIETIRMVLQRACAFVTYTTREGAEKAAEELANKLVIKGVRLKLMWGK 300

Query: 301 PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHS--QLHPPGTHDQPQP---MHYYNMP 360
           PQAPKPE +  +  +Q  VAH GMLPRAVISQQ S  Q  PPG   Q QP    +Y+N+ 
Sbjct: 301 PQAPKPEED--EAGRQGHVAHGGMLPRAVISQQQSGDQPQPPGMEGQQQPASASYYFNI- 360

Query: 361 PPPPQQERAFYPSMDPQRMGALISTHDSGAPHSGPASSTEARPGSEKQHQQGHQYPYHAM 420
           P PP  ER  YPSMDPQRMGAL+ + + G    GP  + + +  S      G  YP    
Sbjct: 361 PAPPAAERTLYPSMDPQRMGALVESQE-GDGKPGPQQAGQGQASS----SSGQSYP---- 420

Query: 421 HPPPP--HAQYQQQFYPPYG-------YVQQHYPQYPPYHSNMPPPPQPQPQ--PQPPPG 480
            PPPP  H      +YPPYG          Q  PQYP Y   + PP Q Q     QP P 
Sbjct: 421 EPPPPYYHGGQYPPYYPPYGGYMPPPRMPYQQPPQYPAYQPMLAPPAQSQASSLQQPAPA 479

Query: 481 SHQYQQHSAPQGSAPQSQ 483
           + Q        G  PQ Q
Sbjct: 481 TQQL-------GQGPQQQ 479

[Close]

BLAST of Cp4.1LG02g11470 vs. ExPASy Swiss-Prot
Match: Q9ZW36 (Zinc finger CCCH domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=At2g29580 PE=1 SV=1)

HSP 1 Score: 652.9 bits (1683), Expect = 3.0e-186
Identity = 354/504 (70.24%), Postives = 399/504 (79.17%), Query Frame = 0


Query: 1   MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60
           MAHR+LRD EADGWERSDFPIICESCLGDNPYVRMTKA+YDKECKICTRPFTVFRWRPGR
Sbjct: 1   MAHRILRDHEADGWERSDFPIICESCLGDNPYVRMTKANYDKECKICTRPFTVFRWRPGR 60

Query: 61  DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 120
           DARYKK+E+CQTC KLKNVCQVCLLDLEYGLPVQVRDTAL+I+++DSIPKSDVNRE+FAE
Sbjct: 61  DARYKKTEVCQTCCKLKNVCQVCLLDLEYGLPVQVRDTALNISTHDSIPKSDVNREFFAE 120

Query: 121 EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR 180
           EHDRK RAG+DYESSFGK RPNDTI  LQRTTPYYKRNRAH+CSF+IRGECTRG ECPYR
Sbjct: 121 EHDRKTRAGLDYESSFGKIRPNDTIRMLQRTTPYYKRNRAHICSFFIRGECTRGDECPYR 180

Query: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT 240
           HEMPETGELSQQNIKDRYYGVNDPVALKLL KAGEM +LE PED+SIRTLYVGGL++RV 
Sbjct: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLGKAGEMGTLESPEDQSIRTLYVGGLNSRVL 240

Query: 241 EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGR 300
           EQD+RD FYAHGEIESIR++ ++ACAFVTYTTREGAEKAA ELSN+LVV G RLKL WGR
Sbjct: 241 EQDIRDQFYAHGEIESIRILAEKACAFVTYTTREGAEKAAEELSNRLVVNGQRLKLTWGR 300

Query: 301 PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHSQLHPPGTHDQPQPMHYYNMPPPPPQ 360
           PQ PKP+ +GS++  Q +VAHSG+LPRAVISQQ          +QP PM  Y M PPPPQ
Sbjct: 301 PQVPKPDQDGSNQ--QGSVAHSGLLPRAVISQQ---------QNQPPPMLQYYMHPPPPQ 360

Query: 361 ---QERAFYPSMDPQRMGALISTHDSGAPHS---GPASSTEARPGSEKQHQQGHQYPYHA 420
              Q+R FYPSMDPQRMGA+ S+ +SG+  S   G +SS+   P        GH YP H 
Sbjct: 361 PPHQDRPFYPSMDPQRMGAVSSSKESGSSTSDNRGASSSSYTMP------PHGH-YPQHQ 420

Query: 421 MHPPPPHAQYQQ---QFYPPY--GYVQQHYPQYP--PYHSNMPPPPQPQPQPQPPPGSHQ 480
            +PPP +  Y Q   Q YPPY  G+ QQ    YP  P   + P PP P     PPP S  
Sbjct: 421 PYPPPSYGGYMQPPYQQYPPYHHGHSQQADHDYPQQPGPGSRPNPPHPSSVSAPPPDS-- 480

Query: 481 YQQHSAPQGSAPQSQGGA-SSGSA 491
               +AP GS+ QS   A ++GS+
Sbjct: 481 --VSAAPSGSSQQSADAAVTTGSS 482

[Close]

BLAST of Cp4.1LG02g11470 vs. ExPASy Swiss-Prot
Match: Q9LNV5 (Zinc finger CCCH domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=At1g07360 PE=1 SV=1)

HSP 1 Score: 648.3 bits (1671), Expect = 7.4e-185
Identity = 346/508 (68.11%), Postives = 393/508 (77.36%), Query Frame = 0


Query: 1   MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60
           MAHR+LRD EADGWERSDFPIICESCLGDNPYVRMTKA+YDKECKICTRPFTVFRWRPGR
Sbjct: 1   MAHRILRDHEADGWERSDFPIICESCLGDNPYVRMTKANYDKECKICTRPFTVFRWRPGR 60

Query: 61  DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 120
           DARYKK+EICQTC KLKNVCQVCLLDLEYGLPVQVRDTAL+I+++DSIPKSDVNREYFAE
Sbjct: 61  DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALNISTHDSIPKSDVNREYFAE 120

Query: 121 EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR 180
           EHDRKARAG+DYESSFGK RPNDTILKLQRTTPYYKRNRAHVCSF+IRGECTRG+ECPYR
Sbjct: 121 EHDRKARAGLDYESSFGKMRPNDTILKLQRTTPYYKRNRAHVCSFFIRGECTRGAECPYR 180

Query: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT 240
           HEMPETGELSQQNIKDRYYGVNDPVA+KLL KAGEM +LE P+DESI+TLYVGGL++R+ 
Sbjct: 181 HEMPETGELSQQNIKDRYYGVNDPVAMKLLGKAGEMGTLESPDDESIKTLYVGGLNSRIL 240

Query: 241 EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGR 300
           EQD+RD FYAHGEIESIR++  +ACAFVTYT+REGAEKAA ELSN+LV+ G RLKL WGR
Sbjct: 241 EQDIRDQFYAHGEIESIRILADKACAFVTYTSREGAEKAAQELSNRLVINGQRLKLTWGR 300

Query: 301 PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHSQLHPPGTHDQPQPMHYYNMPPPPPQ 360
              PKP+ +G+++  Q  VAHSG+LPRAVISQQ         H+QP PM  Y M PPP  
Sbjct: 301 ---PKPDQDGANQ--QGGVAHSGLLPRAVISQQ---------HNQPPPMQQYYMHPPPAN 360

Query: 361 QERAFYPSMDPQRMGALISTHDSGAPHSGPASSTEARPGSEKQHQQGHQYPYHAMHPPPP 420
           Q++ +YPSMDPQRMGA+IST ++G       SSTE    S   +              PP
Sbjct: 361 QDKPYYPSMDPQRMGAVISTQEAG------GSSTENNGASSSSYMM------------PP 420

Query: 421 HAQYQQQFYPPYGYVQQHY-PQYPPYHSNMPPPPQPQPQPQPPPGSHQYQQHSAPQGSAP 480
           H  Y     PPYGY+   Y  QYPP H + P P Q      PPP ++ Y Q   P GS P
Sbjct: 421 HQSYPP---PPYGYMPSPYQQQYPPNHHHQPSPMQ---HYAPPPAAYPYPQQPGP-GSRP 469

Query: 481 QSQGGASSGSAPLGSTPSASAPSSTSSE 508
                A S  +P  +   + APS +S +
Sbjct: 481 APSPTAVSAISPDSAPAGSGAPSGSSQQ 469

[Close]

BLAST of Cp4.1LG02g11470 vs. ExPASy Swiss-Prot
Match: Q9FL40 (Zinc finger CCCH domain-containing protein 53 OS=Arabidopsis thaliana OX=3702 GN=At5g07060 PE=2 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 1.7e-125
Identity = 242/426 (56.81%), Postives = 290/426 (68.08%), Query Frame = 0


Query: 7   RDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGRDARYKK 66
           RD  ADGWE +DFPI CESC GDNPY+RMT+ADYDKECKIC+RPFT FRWRPGR+AR+KK
Sbjct: 4   RDHGADGWESADFPITCESCFGDNPYMRMTRADYDKECKICSRPFTAFRWRPGRNARFKK 63

Query: 67  SEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAEEHDRKA 126
           +EICQTCSKLKNVCQVCLLDL +GLPVQVRD+AL+INS+ S+P S VNREYFA+EHD K 
Sbjct: 64  TEICQTCSKLKNVCQVCLLDLGFGLPVQVRDSALNINSHYSVPMSHVNREYFADEHDPKT 123

Query: 127 RAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYRHEMPET 186
           RAG+DYESSFGK +PNDTILKLQR TP Y++NR  +CSFY  G+C RG+EC +RHEMPET
Sbjct: 124 RAGLDYESSFGKMQPNDTILKLQRRTPSYEKNRPKICSFYTIGQCKRGAECSFRHEMPET 183

Query: 187 GELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVTEQDLRD 246
           GELS QNI+DRYY VNDPVA+KLL KAGEM +LEPPEDESI+TLYVGGL++R+ EQD+ D
Sbjct: 184 GELSHQNIRDRYYSVNDPVAMKLLRKAGEMGTLEPPEDESIKTLYVGGLNSRIFEQDIHD 243

Query: 247 NFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGRPQAPKP 306
           +FYA+GE+ESIR++ +                                          K 
Sbjct: 244 HFYAYGEMESIRVMAEDG----------------------------------------KY 303

Query: 307 ESEGSDEAKQAAVAHSGMLPRAVISQQHSQLHPPGTHDQPQPMHYYNMPPPPPQQERAFY 366
           +  GS++ +Q ++AH+G+     ISQQ +Q      H Q Q   YY  PPPP   E + Y
Sbjct: 304 DQSGSNQQQQGSIAHTGL-----ISQQQNQ------HSQMQ--QYYMQPPPP--NEYSHY 356

Query: 367 PSMDPQRMGALISTHDSGAPHSGPASSTEARPGSEKQHQQGHQYPYHAMHPPPPHAQYQQ 426
           PSMD QRMGA  ST +S     G ++S   R  S         Y Y    P PPH  Y  
Sbjct: 364 PSMDTQRMGAAFSTQES----DGSSTSENNRAYS--------SYSY----PMPPHQPYPT 356

Query: 427 QFYPPY 433
              PPY
Sbjct: 424 P--PPY 356

[Close]

BLAST of Cp4.1LG02g11470 vs. NCBI nr
Match: XP_023525004.1 (zinc finger CCCH domain-containing protein 40-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1020 bits (2637), Expect = 0.0
Identity = 511/511 (100.00%), Postives = 511/511 (100.00%), Query Frame = 0


Query: 1   MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60
           MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR
Sbjct: 1   MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60

Query: 61  DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 120
           DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE
Sbjct: 61  DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 120

Query: 121 EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR 180
           EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR
Sbjct: 121 EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR 180

Query: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT 240
           HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT
Sbjct: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT 240

Query: 241 EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGR 300
           EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGR
Sbjct: 241 EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGR 300

Query: 301 PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHSQLHPPGTHDQPQPMHYYNMPPPPPQ 360
           PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHSQLHPPGTHDQPQPMHYYNMPPPPPQ
Sbjct: 301 PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHSQLHPPGTHDQPQPMHYYNMPPPPPQ 360

Query: 361 QERAFYPSMDPQRMGALISTHDSGAPHSGPASSTEARPGSEKQHQQGHQYPYHAMHPPPP 420
           QERAFYPSMDPQRMGALISTHDSGAPHSGPASSTEARPGSEKQHQQGHQYPYHAMHPPPP
Sbjct: 361 QERAFYPSMDPQRMGALISTHDSGAPHSGPASSTEARPGSEKQHQQGHQYPYHAMHPPPP 420

Query: 421 HAQYQQQFYPPYGYVQQHYPQYPPYHSNMPPPPQPQPQPQPPPGSHQYQQHSAPQGSAPQ 480
           HAQYQQQFYPPYGYVQQHYPQYPPYHSNMPPPPQPQPQPQPPPGSHQYQQHSAPQGSAPQ
Sbjct: 421 HAQYQQQFYPPYGYVQQHYPQYPPYHSNMPPPPQPQPQPQPPPGSHQYQQHSAPQGSAPQ 480

Query: 481 SQGGASSGSAPLGSTPSASAPSSTSSEPASS 511
           SQGGASSGSAPLGSTPSASAPSSTSSEPASS
Sbjct: 481 SQGGASSGSAPLGSTPSASAPSSTSSEPASS 511

[Close]

BLAST of Cp4.1LG02g11470 vs. NCBI nr
Match: XP_022948980.1 (zinc finger CCCH domain-containing protein 49 [Cucurbita moschata])

HSP 1 Score: 1009 bits (2610), Expect = 0.0
Identity = 509/513 (99.22%), Postives = 509/513 (99.22%), Query Frame = 0


Query: 1   MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60
           MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR
Sbjct: 1   MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60

Query: 61  DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 120
           DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE
Sbjct: 61  DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 120

Query: 121 EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR 180
           EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR
Sbjct: 121 EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR 180

Query: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT 240
           HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT
Sbjct: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT 240

Query: 241 EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGR 300
           EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGR
Sbjct: 241 EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGR 300

Query: 301 PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHSQLHPPGTHDQPQPMHYYNMPPPPPQ 360
           PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHSQLHPPGTHDQPQPMHYYNMPPPPPQ
Sbjct: 301 PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHSQLHPPGTHDQPQPMHYYNMPPPPPQ 360

Query: 361 QERAFYPSMDPQRMGALISTHDSGAPHSGPASSTEARPGSEKQHQQGHQYPYHAMHPPPP 420
           QERAFYPSMDPQRMGALISTHDSGAPHSGPASSTEARPG EKQHQQGHQYPYHAMHPPPP
Sbjct: 361 QERAFYPSMDPQRMGALISTHDSGAPHSGPASSTEARPGLEKQHQQGHQYPYHAMHPPPP 420

Query: 421 HAQYQQQFYPPYGYVQQHYPQYPPYHSNMPPPPQPQPQPQ--PPPGSHQYQQHSAPQGSA 480
           HAQYQQQFYPPYGYVQQHYPQYPPYHSNMPPPPQPQPQPQ  PPPGS QYQQHSAPQGSA
Sbjct: 421 HAQYQQQFYPPYGYVQQHYPQYPPYHSNMPPPPQPQPQPQSQPPPGSQQYQQHSAPQGSA 480

Query: 481 PQSQGGASSGSAPLGSTPSASAPSSTSSEPASS 511
           PQSQGGASSGSAPLGSTPSASAPSSTSSEPASS
Sbjct: 481 PQSQGGASSGSAPLGSTPSASAPSSTSSEPASS 513

[Close]

BLAST of Cp4.1LG02g11470 vs. NCBI nr
Match: KAG7036970.1 (Zinc finger CCCH domain-containing protein 49 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1006 bits (2602), Expect = 0.0
Identity = 507/511 (99.22%), Postives = 507/511 (99.22%), Query Frame = 0


Query: 1   MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60
           MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR
Sbjct: 1   MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60

Query: 61  DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 120
           DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE
Sbjct: 61  DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 120

Query: 121 EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR 180
           EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR
Sbjct: 121 EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR 180

Query: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT 240
           HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT
Sbjct: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT 240

Query: 241 EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGR 300
           EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGR
Sbjct: 241 EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGR 300

Query: 301 PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHSQLHPPGTHDQPQPMHYYNMPPPPPQ 360
           PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHSQLHPPGTHDQPQPMHYYNMPPPPPQ
Sbjct: 301 PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHSQLHPPGTHDQPQPMHYYNMPPPPPQ 360

Query: 361 QERAFYPSMDPQRMGALISTHDSGAPHSGPASSTEARPGSEKQHQQGHQYPYHAMHPPPP 420
           QERAFYPSMDPQRMGALISTHDSGAPHSGPASSTEARPG EKQHQQGHQYPYHAMHPPPP
Sbjct: 361 QERAFYPSMDPQRMGALISTHDSGAPHSGPASSTEARPGLEKQHQQGHQYPYHAMHPPPP 420

Query: 421 HAQYQQQFYPPYGYVQQHYPQYPPYHSNMPPPPQPQPQPQPPPGSHQYQQHSAPQGSAPQ 480
           HAQYQQQFYPPYGYVQQHYPQYPPYHSNMPPPPQPQPQP  PPGS QYQQHSAPQGSAPQ
Sbjct: 421 HAQYQQQFYPPYGYVQQHYPQYPPYHSNMPPPPQPQPQP--PPGSQQYQQHSAPQGSAPQ 480

Query: 481 SQGGASSGSAPLGSTPSASAPSSTSSEPASS 511
           SQGGASSGSAPLGSTPSASAPSSTSSEPASS
Sbjct: 481 SQGGASSGSAPLGSTPSASAPSSTSSEPASS 509

[Close]

BLAST of Cp4.1LG02g11470 vs. NCBI nr
Match: KAG6607293.1 (Zinc finger CCCH domain-containing protein 49, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1003 bits (2592), Expect = 0.0
Identity = 509/531 (95.86%), Postives = 509/531 (95.86%), Query Frame = 0


Query: 1   MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60
           MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR
Sbjct: 1   MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60

Query: 61  DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 120
           DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE
Sbjct: 61  DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 120

Query: 121 EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR 180
           EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR
Sbjct: 121 EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR 180

Query: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT 240
           HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT
Sbjct: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT 240

Query: 241 EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGR 300
           EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGR
Sbjct: 241 EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGR 300

Query: 301 PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHSQLHPPGTHDQPQPMHYYNMPPPPPQ 360
           PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHSQLHPPGTHDQPQPMHYYNMPPPPPQ
Sbjct: 301 PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHSQLHPPGTHDQPQPMHYYNMPPPPPQ 360

Query: 361 QERAFYPSMDPQRMGALISTHDSGAPHSGPASSTEARPGSEKQHQQGHQYPYHAMHPPPP 420
           QERAFYPSMDPQRMGALISTHDSGAPHSGPASSTEARPG EKQHQQGHQYPYHAMHPPPP
Sbjct: 361 QERAFYPSMDPQRMGALISTHDSGAPHSGPASSTEARPGLEKQHQQGHQYPYHAMHPPPP 420

Query: 421 HAQYQQQFYPPYGYVQQHYPQYPPYHSNMPPPPQPQPQPQP------------------- 480
           HAQYQQQFYPPYGYVQQHYPQYPPYHSNMPPPPQPQPQPQP                   
Sbjct: 421 HAQYQQQFYPPYGYVQQHYPQYPPYHSNMPPPPQPQPQPQPQPQPQPQPQPQPQPQPQSQ 480

Query: 481 -PPGSHQYQQHSAPQGSAPQSQGGASSGSAPLGSTPSASAPSSTSSEPASS 511
            PPGS QYQQHSAPQGSAPQSQGGASSGSAPLGSTPSASAPSSTSSEPASS
Sbjct: 481 PPPGSQQYQQHSAPQGSAPQSQGGASSGSAPLGSTPSASAPSSTSSEPASS 531

[Close]

BLAST of Cp4.1LG02g11470 vs. NCBI nr
Match: XP_022998053.1 (zinc finger CCCH domain-containing protein 40-like [Cucurbita maxima] >XP_022998054.1 zinc finger CCCH domain-containing protein 40-like [Cucurbita maxima] >XP_022998055.1 zinc finger CCCH domain-containing protein 40-like [Cucurbita maxima] >XP_022998056.1 zinc finger CCCH domain-containing protein 40-like [Cucurbita maxima])

HSP 1 Score: 997 bits (2577), Expect = 0.0
Identity = 501/509 (98.43%), Postives = 501/509 (98.43%), Query Frame = 0


Query: 1   MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60
           MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR
Sbjct: 1   MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60

Query: 61  DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 120
           DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE
Sbjct: 61  DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 120

Query: 121 EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR 180
           EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR
Sbjct: 121 EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR 180

Query: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT 240
           HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT
Sbjct: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT 240

Query: 241 EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGR 300
           EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGR
Sbjct: 241 EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGR 300

Query: 301 PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHSQLHPPGTHDQPQPMHYYNMPPPPPQ 360
           PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHSQLHPPGTHDQPQPMHYYNMPPPPPQ
Sbjct: 301 PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHSQLHPPGTHDQPQPMHYYNMPPPPPQ 360

Query: 361 QERAFYPSMDPQRMGALISTHDSGAPHSGPASSTEARPGSEKQHQQGHQYPYHAMHPPPP 420
           QERAFYPSMDPQRMGALISTHDSGAPHSGPASSTEARPGSEKQHQQGHQYPYHAMHPPPP
Sbjct: 361 QERAFYPSMDPQRMGALISTHDSGAPHSGPASSTEARPGSEKQHQQGHQYPYHAMHPPPP 420

Query: 421 HAQYQQQFYPPYGYVQQHYPQYPPYHSNMPPPPQPQPQPQPPPGSHQYQQHSAPQGSAPQ 480
           HAQYQQQFYPPYGYVQQHYPQYPPYHSNMPPPPQP      PPGS QYQQHSAPQ SAPQ
Sbjct: 421 HAQYQQQFYPPYGYVQQHYPQYPPYHSNMPPPPQP------PPGSQQYQQHSAPQDSAPQ 480

Query: 481 SQGGASSGSAPLGSTPSASAPSSTSSEPA 509
           SQGGASSGSAPLGSTPSASAPSSTSSEPA
Sbjct: 481 SQGGASSGSAPLGSTPSASAPSSTSSEPA 503

[Close]

BLAST of Cp4.1LG02g11470 vs. ExPASy TrEMBL
Match: A0A6J1GBF9 (zinc finger CCCH domain-containing protein 49 OS=Cucurbita moschata OX=3662 GN=LOC111452464 PE=4 SV=1)

HSP 1 Score: 1009 bits (2610), Expect = 0.0
Identity = 509/513 (99.22%), Postives = 509/513 (99.22%), Query Frame = 0


Query: 1   MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60
           MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR
Sbjct: 1   MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60

Query: 61  DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 120
           DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE
Sbjct: 61  DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 120

Query: 121 EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR 180
           EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR
Sbjct: 121 EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR 180

Query: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT 240
           HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT
Sbjct: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT 240

Query: 241 EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGR 300
           EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGR
Sbjct: 241 EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGR 300

Query: 301 PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHSQLHPPGTHDQPQPMHYYNMPPPPPQ 360
           PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHSQLHPPGTHDQPQPMHYYNMPPPPPQ
Sbjct: 301 PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHSQLHPPGTHDQPQPMHYYNMPPPPPQ 360

Query: 361 QERAFYPSMDPQRMGALISTHDSGAPHSGPASSTEARPGSEKQHQQGHQYPYHAMHPPPP 420
           QERAFYPSMDPQRMGALISTHDSGAPHSGPASSTEARPG EKQHQQGHQYPYHAMHPPPP
Sbjct: 361 QERAFYPSMDPQRMGALISTHDSGAPHSGPASSTEARPGLEKQHQQGHQYPYHAMHPPPP 420

Query: 421 HAQYQQQFYPPYGYVQQHYPQYPPYHSNMPPPPQPQPQPQ--PPPGSHQYQQHSAPQGSA 480
           HAQYQQQFYPPYGYVQQHYPQYPPYHSNMPPPPQPQPQPQ  PPPGS QYQQHSAPQGSA
Sbjct: 421 HAQYQQQFYPPYGYVQQHYPQYPPYHSNMPPPPQPQPQPQSQPPPGSQQYQQHSAPQGSA 480

Query: 481 PQSQGGASSGSAPLGSTPSASAPSSTSSEPASS 511
           PQSQGGASSGSAPLGSTPSASAPSSTSSEPASS
Sbjct: 481 PQSQGGASSGSAPLGSTPSASAPSSTSSEPASS 513

[Close]

BLAST of Cp4.1LG02g11470 vs. ExPASy TrEMBL
Match: A0A6J1K970 (zinc finger CCCH domain-containing protein 40-like OS=Cucurbita maxima OX=3661 GN=LOC111492819 PE=4 SV=1)

HSP 1 Score: 997 bits (2577), Expect = 0.0
Identity = 501/509 (98.43%), Postives = 501/509 (98.43%), Query Frame = 0


Query: 1   MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60
           MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR
Sbjct: 1   MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60

Query: 61  DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 120
           DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE
Sbjct: 61  DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 120

Query: 121 EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR 180
           EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR
Sbjct: 121 EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR 180

Query: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT 240
           HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT
Sbjct: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT 240

Query: 241 EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGR 300
           EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGR
Sbjct: 241 EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGR 300

Query: 301 PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHSQLHPPGTHDQPQPMHYYNMPPPPPQ 360
           PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHSQLHPPGTHDQPQPMHYYNMPPPPPQ
Sbjct: 301 PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHSQLHPPGTHDQPQPMHYYNMPPPPPQ 360

Query: 361 QERAFYPSMDPQRMGALISTHDSGAPHSGPASSTEARPGSEKQHQQGHQYPYHAMHPPPP 420
           QERAFYPSMDPQRMGALISTHDSGAPHSGPASSTEARPGSEKQHQQGHQYPYHAMHPPPP
Sbjct: 361 QERAFYPSMDPQRMGALISTHDSGAPHSGPASSTEARPGSEKQHQQGHQYPYHAMHPPPP 420

Query: 421 HAQYQQQFYPPYGYVQQHYPQYPPYHSNMPPPPQPQPQPQPPPGSHQYQQHSAPQGSAPQ 480
           HAQYQQQFYPPYGYVQQHYPQYPPYHSNMPPPPQP      PPGS QYQQHSAPQ SAPQ
Sbjct: 421 HAQYQQQFYPPYGYVQQHYPQYPPYHSNMPPPPQP------PPGSQQYQQHSAPQDSAPQ 480

Query: 481 SQGGASSGSAPLGSTPSASAPSSTSSEPA 509
           SQGGASSGSAPLGSTPSASAPSSTSSEPA
Sbjct: 481 SQGGASSGSAPLGSTPSASAPSSTSSEPA 503

[Close]

BLAST of Cp4.1LG02g11470 vs. ExPASy TrEMBL
Match: A0A6J1HIK0 (zinc finger CCCH domain-containing protein 40-like OS=Cucurbita moschata OX=3662 GN=LOC111464731 PE=4 SV=1)

HSP 1 Score: 931 bits (2405), Expect = 0.0
Identity = 471/513 (91.81%), Postives = 486/513 (94.74%), Query Frame = 0


Query: 1   MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60
           MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR
Sbjct: 1   MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60

Query: 61  DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 120
           DARYKK+EICQTCSKLKNVCQVCLLDLEYGLPVQVRD ALSINSNDSIPKSDVNREYFAE
Sbjct: 61  DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDIALSINSNDSIPKSDVNREYFAE 120

Query: 121 EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR 180
           EHDRKARAGIDYESS+GKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR
Sbjct: 121 EHDRKARAGIDYESSYGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR 180

Query: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT 240
           HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT
Sbjct: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT 240

Query: 241 EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGR 300
           EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAA ELSNKLV+KGLRLKLMWGR
Sbjct: 241 EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGR 300

Query: 301 PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHSQLHPPGTHDQPQPMHYYNMPPPPPQ 360
           PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQH+ LHP G+HDQPQ +HYYN+PPPPPQ
Sbjct: 301 PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHNHLHPSGSHDQPQAIHYYNIPPPPPQ 360

Query: 361 QERAFYPSMDPQRMGALISTHDSGAPHSGPASSTEARPGSEKQHQQGHQYPYHAMHPPPP 420
           QERAFYPSMDPQRMGAL+STH++G P +GPA STE RPGSEKQHQQGHQ+PYH MHPPPP
Sbjct: 361 QERAFYPSMDPQRMGALVSTHEAGGPPNGPAGSTETRPGSEKQHQQGHQFPYHTMHPPPP 420

Query: 421 HAQYQQQFYPPYGYVQQHYPQYPPYHSNMPP--PPQPQPQPQPPPGSHQYQQHSAPQGSA 480
             QYQQQFYPPYGYVQ HYP YPPYHS+MPP  PP P PQP PP G+ QYQQHS P GSA
Sbjct: 421 -TQYQQQFYPPYGYVQ-HYPPYPPYHSSMPPQPPPPPHPQPYPPSGTQQYQQHSIPPGSA 480

Query: 481 PQSQGGASSGSAPLGSTPSASAPSSTSSEPASS 511
           P S GGASSGSAP GSTPSASAPS+T SEPASS
Sbjct: 481 PPSHGGASSGSAPQGSTPSASAPSATPSEPASS 511

[Close]

BLAST of Cp4.1LG02g11470 vs. ExPASy TrEMBL
Match: A0A6J1DLS8 (zinc finger CCCH domain-containing protein 40-like OS=Momordica charantia OX=3673 GN=LOC111022136 PE=4 SV=1)

HSP 1 Score: 928 bits (2399), Expect = 0.0
Identity = 476/513 (92.79%), Postives = 489/513 (95.32%), Query Frame = 0


Query: 1   MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60
           MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMT+ADYDKECKICTRPFTVFRWRPGR
Sbjct: 1   MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTRADYDKECKICTRPFTVFRWRPGR 60

Query: 61  DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 120
           DARYKK+EICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSND+IPKSDVNREYFAE
Sbjct: 61  DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDAIPKSDVNREYFAE 120

Query: 121 EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR 180
           EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR
Sbjct: 121 EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR 180

Query: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT 240
           HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT
Sbjct: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT 240

Query: 241 EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGR 300
           EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAA ELSNKLV+KGLRLKLMWGR
Sbjct: 241 EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGR 300

Query: 301 PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQ-HSQLHPPGTHDQPQPMHYYNMPPPPP 360
           PQAPK E+EGSDEAKQAAVAHSGMLPRAVISQQ HSQLHPPGTHDQPQ MHY+N+PPPPP
Sbjct: 301 PQAPKLETEGSDEAKQAAVAHSGMLPRAVISQQQHSQLHPPGTHDQPQTMHYFNIPPPPP 360

Query: 361 QQERAFYPSMDPQRMGALISTHDSGAPHSGPASSTEARPGSEKQHQQGHQYP-YHAMHPP 420
           QQERAFYPSMDPQRMGAL+STHD+GAP +GPA STE  PGSEKQHQQGHQ+P YHAMHPP
Sbjct: 361 QQERAFYPSMDPQRMGALVSTHDAGAPPNGPAGSTETGPGSEKQHQQGHQFPPYHAMHPP 420

Query: 421 PPHAQYQQQFYPPYGYVQQHYPQYPPYHSNMPPPPQPQPQPQPPPGSHQYQQHSAPQGSA 480
           PP  QYQQQFYPPYGYVQ HYP YPPYHS+MPPPPQ QPQP  PPG+ QYQQH A  GSA
Sbjct: 421 PP-PQYQQQFYPPYGYVQ-HYPPYPPYHSSMPPPPQHQPQP--PPGNQQYQQHPASPGSA 480

Query: 481 PQSQGGASSGSAPLGSTPSASAPSSTSSEPASS 511
           PQS GGASSGSAPLGS P  SAPSSTSSEPASS
Sbjct: 481 PQSHGGASSGSAPLGSIPLVSAPSSTSSEPASS 509

[Close]

BLAST of Cp4.1LG02g11470 vs. ExPASy TrEMBL
Match: A0A6J1I340 (zinc finger CCCH domain-containing protein 40-like OS=Cucurbita maxima OX=3661 GN=LOC111469478 PE=4 SV=1)

HSP 1 Score: 924 bits (2388), Expect = 0.0
Identity = 468/511 (91.59%), Postives = 481/511 (94.13%), Query Frame = 0


Query: 1   MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60
           MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR
Sbjct: 1   MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60

Query: 61  DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 120
           DARYKK+EICQTCSKLKNVCQVCLLDLEYGLPVQVRD ALSINSNDSIPKSDVNREYFAE
Sbjct: 61  DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDIALSINSNDSIPKSDVNREYFAE 120

Query: 121 EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR 180
           EHDRKARAGIDYESS+GKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR
Sbjct: 121 EHDRKARAGIDYESSYGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR 180

Query: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT 240
           HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT
Sbjct: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT 240

Query: 241 EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGR 300
           EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAA ELSNKLV+KGLRLKLMWGR
Sbjct: 241 EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGR 300

Query: 301 PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHSQLHPPGTHDQPQPMHYYNMPPPPPQ 360
           PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQH+ LHP G+HDQPQ MHYYN+P PPPQ
Sbjct: 301 PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHNHLHPSGSHDQPQAMHYYNIPAPPPQ 360

Query: 361 QERAFYPSMDPQRMGALISTHDSGAPHSGPASSTEARPGSEKQHQQGHQYPYHAMHPPPP 420
           QERAFYPSMDPQRMGAL+STH++G P SGPA STE RPGSEKQHQQGHQ+PYH MHPPPP
Sbjct: 361 QERAFYPSMDPQRMGALVSTHEAGGPPSGPAGSTETRPGSEKQHQQGHQFPYHTMHPPPP 420

Query: 421 HAQYQQQFYPPYGYVQQHYPQYPPYHSNMPPPPQPQPQPQPPPGSHQYQQHSAPQGSAPQ 480
             QYQQQFYPPYGYVQ HYP YPPYHS+MPP P P PQP PP G+ QYQQ S P GSAP 
Sbjct: 421 -TQYQQQFYPPYGYVQ-HYPPYPPYHSSMPPQPLPHPQPYPPSGTQQYQQQSIPPGSAPP 480

Query: 481 SQGGASSGSAPLGSTPSASAPSSTSSEPASS 511
           S GGASSGSAP GST S SAPS+T SEPASS
Sbjct: 481 SHGGASSGSAPQGSTQSVSAPSATPSEPASS 509

[Close]

BLAST of Cp4.1LG02g11470 vs. TAIR 10
Match: AT2G29580.1 (CCCH-type zinc fingerfamily protein with RNA-binding domain )

HSP 1 Score: 652.9 bits (1683), Expect = 2.1e-187
Identity = 354/504 (70.24%), Postives = 399/504 (79.17%), Query Frame = 0


Query: 1   MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60
           MAHR+LRD EADGWERSDFPIICESCLGDNPYVRMTKA+YDKECKICTRPFTVFRWRPGR
Sbjct: 1   MAHRILRDHEADGWERSDFPIICESCLGDNPYVRMTKANYDKECKICTRPFTVFRWRPGR 60

Query: 61  DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 120
           DARYKK+E+CQTC KLKNVCQVCLLDLEYGLPVQVRDTAL+I+++DSIPKSDVNRE+FAE
Sbjct: 61  DARYKKTEVCQTCCKLKNVCQVCLLDLEYGLPVQVRDTALNISTHDSIPKSDVNREFFAE 120

Query: 121 EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR 180
           EHDRK RAG+DYESSFGK RPNDTI  LQRTTPYYKRNRAH+CSF+IRGECTRG ECPYR
Sbjct: 121 EHDRKTRAGLDYESSFGKIRPNDTIRMLQRTTPYYKRNRAHICSFFIRGECTRGDECPYR 180

Query: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT 240
           HEMPETGELSQQNIKDRYYGVNDPVALKLL KAGEM +LE PED+SIRTLYVGGL++RV 
Sbjct: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLGKAGEMGTLESPEDQSIRTLYVGGLNSRVL 240

Query: 241 EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGR 300
           EQD+RD FYAHGEIESIR++ ++ACAFVTYTTREGAEKAA ELSN+LVV G RLKL WGR
Sbjct: 241 EQDIRDQFYAHGEIESIRILAEKACAFVTYTTREGAEKAAEELSNRLVVNGQRLKLTWGR 300

Query: 301 PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHSQLHPPGTHDQPQPMHYYNMPPPPPQ 360
           PQ PKP+ +GS++  Q +VAHSG+LPRAVISQQ          +QP PM  Y M PPPPQ
Sbjct: 301 PQVPKPDQDGSNQ--QGSVAHSGLLPRAVISQQ---------QNQPPPMLQYYMHPPPPQ 360

Query: 361 ---QERAFYPSMDPQRMGALISTHDSGAPHS---GPASSTEARPGSEKQHQQGHQYPYHA 420
              Q+R FYPSMDPQRMGA+ S+ +SG+  S   G +SS+   P        GH YP H 
Sbjct: 361 PPHQDRPFYPSMDPQRMGAVSSSKESGSSTSDNRGASSSSYTMP------PHGH-YPQHQ 420

Query: 421 MHPPPPHAQYQQ---QFYPPY--GYVQQHYPQYP--PYHSNMPPPPQPQPQPQPPPGSHQ 480
            +PPP +  Y Q   Q YPPY  G+ QQ    YP  P   + P PP P     PPP S  
Sbjct: 421 PYPPPSYGGYMQPPYQQYPPYHHGHSQQADHDYPQQPGPGSRPNPPHPSSVSAPPPDS-- 480

Query: 481 YQQHSAPQGSAPQSQGGA-SSGSA 491
               +AP GS+ QS   A ++GS+
Sbjct: 481 --VSAAPSGSSQQSADAAVTTGSS 482

[Close]

BLAST of Cp4.1LG02g11470 vs. TAIR 10
Match: AT1G07360.1 (CCCH-type zinc fingerfamily protein with RNA-binding domain )

HSP 1 Score: 648.3 bits (1671), Expect = 5.2e-186
Identity = 346/508 (68.11%), Postives = 393/508 (77.36%), Query Frame = 0


Query: 1   MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60
           MAHR+LRD EADGWERSDFPIICESCLGDNPYVRMTKA+YDKECKICTRPFTVFRWRPGR
Sbjct: 1   MAHRILRDHEADGWERSDFPIICESCLGDNPYVRMTKANYDKECKICTRPFTVFRWRPGR 60

Query: 61  DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 120
           DARYKK+EICQTC KLKNVCQVCLLDLEYGLPVQVRDTAL+I+++DSIPKSDVNREYFAE
Sbjct: 61  DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALNISTHDSIPKSDVNREYFAE 120

Query: 121 EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR 180
           EHDRKARAG+DYESSFGK RPNDTILKLQRTTPYYKRNRAHVCSF+IRGECTRG+ECPYR
Sbjct: 121 EHDRKARAGLDYESSFGKMRPNDTILKLQRTTPYYKRNRAHVCSFFIRGECTRGAECPYR 180

Query: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT 240
           HEMPETGELSQQNIKDRYYGVNDPVA+KLL KAGEM +LE P+DESI+TLYVGGL++R+ 
Sbjct: 181 HEMPETGELSQQNIKDRYYGVNDPVAMKLLGKAGEMGTLESPDDESIKTLYVGGLNSRIL 240

Query: 241 EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGR 300
           EQD+RD FYAHGEIESIR++  +ACAFVTYT+REGAEKAA ELSN+LV+ G RLKL WGR
Sbjct: 241 EQDIRDQFYAHGEIESIRILADKACAFVTYTSREGAEKAAQELSNRLVINGQRLKLTWGR 300

Query: 301 PQAPKPESEGSDEAKQAAVAHSGMLPRAVISQQHSQLHPPGTHDQPQPMHYYNMPPPPPQ 360
              PKP+ +G+++  Q  VAHSG+LPRAVISQQ         H+QP PM  Y M PPP  
Sbjct: 301 ---PKPDQDGANQ--QGGVAHSGLLPRAVISQQ---------HNQPPPMQQYYMHPPPAN 360

Query: 361 QERAFYPSMDPQRMGALISTHDSGAPHSGPASSTEARPGSEKQHQQGHQYPYHAMHPPPP 420
           Q++ +YPSMDPQRMGA+IST ++G       SSTE    S   +              PP
Sbjct: 361 QDKPYYPSMDPQRMGAVISTQEAG------GSSTENNGASSSSYMM------------PP 420

Query: 421 HAQYQQQFYPPYGYVQQHY-PQYPPYHSNMPPPPQPQPQPQPPPGSHQYQQHSAPQGSAP 480
           H  Y     PPYGY+   Y  QYPP H + P P Q      PPP ++ Y Q   P GS P
Sbjct: 421 HQSYPP---PPYGYMPSPYQQQYPPNHHHQPSPMQ---HYAPPPAAYPYPQQPGP-GSRP 469

Query: 481 QSQGGASSGSAPLGSTPSASAPSSTSSE 508
                A S  +P  +   + APS +S +
Sbjct: 481 APSPTAVSAISPDSAPAGSGAPSGSSQQ 469

[Close]

BLAST of Cp4.1LG02g11470 vs. TAIR 10
Match: AT5G07060.1 (CCCH-type zinc fingerfamily protein with RNA-binding domain )

HSP 1 Score: 451.1 bits (1159), Expect = 1.2e-126
Identity = 242/426 (56.81%), Postives = 290/426 (68.08%), Query Frame = 0


Query: 7   RDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGRDARYKK 66
           RD  ADGWE +DFPI CESC GDNPY+RMT+ADYDKECKIC+RPFT FRWRPGR+AR+KK
Sbjct: 4   RDHGADGWESADFPITCESCFGDNPYMRMTRADYDKECKICSRPFTAFRWRPGRNARFKK 63

Query: 67  SEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAEEHDRKA 126
           +EICQTCSKLKNVCQVCLLDL +GLPVQVRD+AL+INS+ S+P S VNREYFA+EHD K 
Sbjct: 64  TEICQTCSKLKNVCQVCLLDLGFGLPVQVRDSALNINSHYSVPMSHVNREYFADEHDPKT 123

Query: 127 RAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYRHEMPET 186
           RAG+DYESSFGK +PNDTILKLQR TP Y++NR  +CSFY  G+C RG+EC +RHEMPET
Sbjct: 124 RAGLDYESSFGKMQPNDTILKLQRRTPSYEKNRPKICSFYTIGQCKRGAECSFRHEMPET 183

Query: 187 GELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVTEQDLRD 246
           GELS QNI+DRYY VNDPVA+KLL KAGEM +LEPPEDESI+TLYVGGL++R+ EQD+ D
Sbjct: 184 GELSHQNIRDRYYSVNDPVAMKLLRKAGEMGTLEPPEDESIKTLYVGGLNSRIFEQDIHD 243

Query: 247 NFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGRPQAPKP 306
           +FYA+GE+ESIR++ +                                          K 
Sbjct: 244 HFYAYGEMESIRVMAEDG----------------------------------------KY 303

Query: 307 ESEGSDEAKQAAVAHSGMLPRAVISQQHSQLHPPGTHDQPQPMHYYNMPPPPPQQERAFY 366
           +  GS++ +Q ++AH+G+     ISQQ +Q      H Q Q   YY  PPPP   E + Y
Sbjct: 304 DQSGSNQQQQGSIAHTGL-----ISQQQNQ------HSQMQ--QYYMQPPPP--NEYSHY 356

Query: 367 PSMDPQRMGALISTHDSGAPHSGPASSTEARPGSEKQHQQGHQYPYHAMHPPPPHAQYQQ 426
           PSMD QRMGA  ST +S     G ++S   R  S         Y Y    P PPH  Y  
Sbjct: 364 PSMDTQRMGAAFSTQES----DGSSTSENNRAYS--------SYSY----PMPPHQPYPT 356

Query: 427 QFYPPY 433
              PPY
Sbjct: 424 P--PPY 356

[Close]

BLAST of Cp4.1LG02g11470 vs. TAIR 10
Match: AT5G07060.2 (CCCH-type zinc fingerfamily protein with RNA-binding domain )

HSP 1 Score: 451.1 bits (1159), Expect = 1.2e-126
Identity = 238/415 (57.35%), Postives = 286/415 (68.92%), Query Frame = 0


Query: 7   RDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGRDARYKK 66
           RD  ADGWE +DFPI CESC GDNPY+RMT+ADYDKECKIC+RPFT FRWRPGR+AR+KK
Sbjct: 4   RDHGADGWESADFPITCESCFGDNPYMRMTRADYDKECKICSRPFTAFRWRPGRNARFKK 63

Query: 67  SEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAEEHDRKA 126
           +EICQTCSKLKNVCQVCLLDL +GLPVQVRD+AL+INS+ S+P S VNREYFA+EHD K 
Sbjct: 64  TEICQTCSKLKNVCQVCLLDLGFGLPVQVRDSALNINSHYSVPMSHVNREYFADEHDPKT 123

Query: 127 RAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYRHEMPET 186
           RAG+DYESSFGK +PNDTILKLQR TP Y++NR  +CSFY  G+C RG+EC +RHEMPET
Sbjct: 124 RAGLDYESSFGKMQPNDTILKLQRRTPSYEKNRPKICSFYTIGQCKRGAECSFRHEMPET 183

Query: 187 GELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVTEQDLRD 246
           GELS QNI+DRYY VNDPVA+KLL KAGEM +LEPPEDESI+TLYVGGL++R+ EQD+ D
Sbjct: 184 GELSHQNIRDRYYSVNDPVAMKLLRKAGEMGTLEPPEDESIKTLYVGGLNSRIFEQDIHD 243

Query: 247 NFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAGELSNKLVVKGLRLKLMWGRPQAPKP 306
           +FYA+GE+ESIR++ +                                          K 
Sbjct: 244 HFYAYGEMESIRVMAEDG----------------------------------------KY 303

Query: 307 ESEGSDEAKQAAVAHSGMLPRAVISQQHSQLHPPGTHDQPQPMHYYNMPPPPPQQERAFY 366
           +  GS++ +Q ++AH+G+     ISQQ +Q      H Q Q   YY  PPPP   E + Y
Sbjct: 304 DQSGSNQQQQGSIAHTGL-----ISQQQNQ------HSQMQ--QYYMQPPPP--NEYSHY 347

Query: 367 PSMDPQRMGALISTHDSGAPHSGPASSTEARPGSEKQHQQGHQYPYHAMHPPPPH 422
           PSMD QRMGA  ST +S     G ++S   R  S         Y Y    P PPH
Sbjct: 364 PSMDTQRMGAAFSTQES----DGSSTSENNRAYS--------SYSY----PMPPH 347

[Close]

BLAST of Cp4.1LG02g11470 vs. TAIR 10
Match: AT5G04210.1 (CCCH-type zinc fingerfamily protein with RNA-binding domain )

HSP 1 Score: 110.5 bits (275), Expect = 3.9e-24
Identity = 63/143 (44.06%), Postives = 91/143 (63.64%), Query Frame = 0


Query: 162 VCSFYIRG-ECTRGSECPYRHEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLE 221
           +C  +  G +CTRG+ C YRHE+    +   ++      G+ +P  L++L +A     L+
Sbjct: 16  ICPLFDAGRQCTRGTMCLYRHEINRGLDCHGRS------GLENPFVLEVLARACNTGPLK 75

Query: 222 PPEDESIRTLYVGGL-DARVTEQDLRDNFYAHGEIESIRMVLQR---ACAFVTYTTREGA 281
           PPED+SI+TLY+  L ++ V EQD+RD+F  +GEIESI +   R    CAF+TYTTR  A
Sbjct: 76  PPEDQSIKTLYIRRLINSSVLEQDIRDHFCPYGEIESIVIFPHRGGGTCAFLTYTTRLAA 135

Query: 282 EKAAGELSNKLVVKGLRLKLMWG 300
           EKA  ELS+   +KG R+KL+WG
Sbjct: 136 EKAMLELSSWTDIKGQRVKLLWG 152

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g11470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5SNN4	2.6e-190	71.77	Zinc finger CCCH domain-containing protein 40 OS=Oryza sativa subsp. japonica OX...	[more]
Q6Z358	2.2e-189	71.08	Zinc finger CCCH domain-containing protein 49 OS=Oryza sativa subsp. japonica OX...	[more]
Q9ZW36	3.0e-186	70.24	Zinc finger CCCH domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LNV5	7.4e-185	68.11	Zinc finger CCCH domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9FL40	1.7e-125	56.81	Zinc finger CCCH domain-containing protein 53 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Cp4.1LG02g11470 vs. NCBI nr


Match Name	Identity	Description
XP_023525004.1	100.00	zinc finger CCCH domain-containing protein 40-like [Cucurbita pepo subsp. pepo]	[more]
XP_022948980.1	99.22	zinc finger CCCH domain-containing protein 49 [Cucurbita moschata]	[more]
KAG7036970.1	99.22	Zinc finger CCCH domain-containing protein 49 [Cucurbita argyrosperma subsp. arg...	[more]
KAG6607293.1	95.86	Zinc finger CCCH domain-containing protein 49, partial [Cucurbita argyrosperma s...	[more]
XP_022998053.1	98.43	zinc finger CCCH domain-containing protein 40-like [Cucurbita maxima] >XP_022998...	[more]

BLAST of Cp4.1LG02g11470 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1GBF9	99.22	zinc finger CCCH domain-containing protein 49 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1K970	98.43	zinc finger CCCH domain-containing protein 40-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1HIK0	91.81	zinc finger CCCH domain-containing protein 40-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1DLS8	92.79	zinc finger CCCH domain-containing protein 40-like OS=Momordica charantia OX=367...	[more]
A0A6J1I340	91.59	zinc finger CCCH domain-containing protein 40-like OS=Cucurbita maxima OX=3661 G...	[more]

BLAST of Cp4.1LG02g11470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G29580.1	2.1e-187	70.24	CCCH-type zinc fingerfamily protein with RNA-binding domain	[more]
AT1G07360.1	5.2e-186	68.11	CCCH-type zinc fingerfamily protein with RNA-binding domain	[more]
AT5G07060.1	1.2e-126	56.81	CCCH-type zinc fingerfamily protein with RNA-binding domain	[more]
AT5G07060.2	1.2e-126	57.35	CCCH-type zinc fingerfamily protein with RNA-binding domain	[more]
AT5G04210.1	3.9e-24	44.06	CCCH-type zinc fingerfamily protein with RNA-binding domain	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 157..183 e-value: 8.7E-6 score: 35.2
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 157..184 score: 14.1828
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 229..297 e-value: 4.4E-15 score: 66.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 230..287 e-value: 1.1E-11 score: 44.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 228..301 score: 15.255088
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 212..309 e-value: 6.9E-18 score: 66.7
IPR032297	Torus domain	PFAM	PF16131	Torus	coord: 150..194 e-value: 3.7E-7 score: 30.8
None	No IPR available	GENE3D	4.10.1000.10		coord: 149..211 e-value: 3.5E-6 score: 28.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 350..364
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 465..511
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 385..407
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 444..464
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 328..342
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 300..511
None	No IPR available	PANTHER	PTHR14089:SF13	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 49-LIKE	coord: 1..481
None	No IPR available	CDD	cd12224	RRM_RBM22	coord: 227..300 e-value: 1.20941E-42 score: 144.325
IPR039171	Pre-mRNA-splicing factor Cwc2/Slt11	PANTHER	PTHR14089	PRE-MRNA-SPLICING FACTOR RBM22	coord: 1..481
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 159..182
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 213..304

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g11470.1	Cp4.1LG02g11470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0000974	Prp19 complex
cellular_component	GO:0071006	U2-type catalytic step 1 spliceosome
cellular_component	GO:0071007	U2-type catalytic step 2 spliceosome
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0036002	pre-mRNA binding
molecular_function	GO:0017070	U6 snRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding