Cp4.1LG02g11430 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTAACCCTACGGTACGATTTCCTGTCGCCATTTCTCTTCTCCGACTGAAATTCGCACTTAAACGACCTAATTTTAGATTCTATTCCATGGCCTGCGATTGCCTCATTCGAGCGCTTCTATCTCATTGTGCTGCGTGTGTGCGTTTTTGTTGTTCTCAGCCTCCGAGCAATGGTGAGTTGACGAAGGCGGAGTCGAGGAAGTCTCATTCATGGTGGTGGGAAGGTCACATCAGCCCCAAAAATTCTAGATGGCTCCGGGAGAATCTCGAGGGTTAG ATGGCTAACCCTACGGTACGATTTCCTGTCGCCATTTCTCTTCTCCGACTGAAATTCGCACTTAAACGACCTAATTTTAGATTCTATTCCATGGCCTGCGATTGCCTCATTCGAGCGCTTCTATCTCATTGTGCTGCGTGTGTGCGTTTTTGTTGTTCTCAGCCTCCGAGCAATGGTGAGTTGACGAAGGCGGAGTCGAGGAAGTCTCATTCATGGTGGTGGGAAGGTCACATCAGCCCCAAAAATTCTAGATGGCTCCGGGAGAATCTCGAGGGTTAG ATGGCTAACCCTACGGTACGATTTCCTGTCGCCATTTCTCTTCTCCGACTGAAATTCGCACTTAAACGACCTAATTTTAGATTCTATTCCATGGCCTGCGATTGCCTCATTCGAGCGCTTCTATCTCATTGTGCTGCGTGTGTGCGTTTTTGTTGTTCTCAGCCTCCGAGCAATGGTGAGTTGACGAAGGCGGAGTCGAGGAAGTCTCATTCATGGTGGTGGGAAGGTCACATCAGCCCCAAAAATTCTAGATGGCTCCGGGAGAATCTCGAGGGTTAG MANPTVRFPVAISLLRLKFALKRPNFRFYSMACDCLIRALLSHCAACVRFCCSQPPSNGELTKAESRKSHSWWWEGHISPKNSRWLRENLEG Homology
BLAST of Cp4.1LG02g11430 vs. ExPASy Swiss-Prot
Match: Q84VY2 (Protein NETWORKED 4B OS=Arabidopsis thaliana OX=3702 GN=NET4B PE=2 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 1.9e-06 Identity = 20/39 (51.28%), Postives = 27/39 (69.23%), Query Frame = 0
BLAST of Cp4.1LG02g11430 vs. ExPASy Swiss-Prot
Match: F4HZB5 (Protein NETWORKED 1D OS=Arabidopsis thaliana OX=3702 GN=NET1D PE=3 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 4.6e-05 Identity = 17/23 (73.91%), Postives = 21/23 (91.30%), Query Frame = 0
BLAST of Cp4.1LG02g11430 vs. ExPASy Swiss-Prot
Match: Q9ZQX8 (Protein NETWORKED 1C OS=Arabidopsis thaliana OX=3702 GN=NET1C PE=3 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 1.4e-04 Identity = 15/28 (53.57%), Postives = 24/28 (85.71%), Query Frame = 0
BLAST of Cp4.1LG02g11430 vs. ExPASy Swiss-Prot
Match: F4KEW8 (Protein NETWORKED 4A OS=Arabidopsis thaliana OX=3702 GN=NET4A PE=2 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 1.8e-04 Identity = 17/35 (48.57%), Postives = 23/35 (65.71%), Query Frame = 0
BLAST of Cp4.1LG02g11430 vs. ExPASy Swiss-Prot
Match: Q9LUI2 (Protein NETWORKED 1A OS=Arabidopsis thaliana OX=3702 GN=NET1A PE=1 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 6.7e-04 Identity = 16/27 (59.26%), Postives = 24/27 (88.89%), Query Frame = 0
BLAST of Cp4.1LG02g11430 vs. NCBI nr
Match: XP_023522537.1 (protein NETWORKED 4A-like isoform X4 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 87.4 bits (215), Expect = 1.11e-17 Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g11430 vs. NCBI nr
Match: XP_023522532.1 (protein NETWORKED 4A-like isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 87.4 bits (215), Expect = 1.12e-17 Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g11430 vs. NCBI nr
Match: XP_022948998.1 (protein NETWORKED 4A-like [Cucurbita moschata]) HSP 1 Score: 87.4 bits (215), Expect = 1.12e-17 Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g11430 vs. NCBI nr
Match: XP_023521179.1 (protein NETWORKED 4A-like [Cucurbita pepo subsp. pepo] >XP_023522268.1 protein NETWORKED 4A-like [Cucurbita pepo subsp. pepo] >XP_023522526.1 protein NETWORKED 4A-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 87.4 bits (215), Expect = 1.12e-17 Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g11430 vs. NCBI nr
Match: XP_023522519.1 (protein NETWORKED 4A-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 87.4 bits (215), Expect = 1.12e-17 Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g11430 vs. ExPASy TrEMBL
Match: A0A6J1GAV6 (protein NETWORKED 4A-like OS=Cucurbita moschata OX=3662 GN=LOC111452470 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 5.43e-18 Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g11430 vs. ExPASy TrEMBL
Match: A0A6J1KEQ8 (protein NETWORKED 4A-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111492593 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 2.59e-17 Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g11430 vs. ExPASy TrEMBL
Match: A0A6J1K893 (protein NETWORKED 4A-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492593 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 2.60e-17 Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g11430 vs. ExPASy TrEMBL
Match: A0A6J1KAQ6 (protein NETWORKED 4A-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492593 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 2.65e-17 Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g11430 vs. ExPASy TrEMBL
Match: A0A2H5QEC3 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_221950 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 1.87e-12 Identity = 25/37 (67.57%), Postives = 31/37 (83.78%), Query Frame = 0
BLAST of Cp4.1LG02g11430 vs. TAIR 10
Match: AT2G30500.1 (Kinase interacting (KIP1-like) family protein ) HSP 1 Score: 53.1 bits (126), Expect = 1.3e-07 Identity = 20/39 (51.28%), Postives = 27/39 (69.23%), Query Frame = 0
BLAST of Cp4.1LG02g11430 vs. TAIR 10
Match: AT2G30500.2 (Kinase interacting (KIP1-like) family protein ) HSP 1 Score: 53.1 bits (126), Expect = 1.3e-07 Identity = 20/39 (51.28%), Postives = 27/39 (69.23%), Query Frame = 0
BLAST of Cp4.1LG02g11430 vs. TAIR 10
Match: AT1G03080.1 (kinase interacting (KIP1-like) family protein ) HSP 1 Score: 48.5 bits (114), Expect = 3.3e-06 Identity = 17/23 (73.91%), Postives = 21/23 (91.30%), Query Frame = 0
BLAST of Cp4.1LG02g11430 vs. TAIR 10
Match: AT4G02710.1 (Kinase interacting (KIP1-like) family protein ) HSP 1 Score: 47.0 bits (110), Expect = 9.6e-06 Identity = 15/28 (53.57%), Postives = 24/28 (85.71%), Query Frame = 0
BLAST of Cp4.1LG02g11430 vs. TAIR 10
Match: AT5G58320.1 (Kinase interacting (KIP1-like) family protein ) HSP 1 Score: 46.6 bits (109), Expect = 1.3e-05 Identity = 17/35 (48.57%), Postives = 23/35 (65.71%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|