Cp4.1LG02g11370 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GGAAAACGACTCTAGGTGGCTTGATCGGAGTAGGTCCGACGGTTATTTTCTCTCTCAAAATCCTCTTTTCTCTCTCTTCTTTCTTTTCTTTCCTTTTTCTTTATTTTTTTCCCTAATTAACTCTGCTTTTAGGCTAATTATAAGTTTCAGAATTAGCTATGCATGGAAATAATCAAAATACCCATCTAGATCATTTTCTCATTTTTCACTATTTTCTTGGGATTTTTCTAAGCATTTTTTCCTTCTACCTCATCTTGAAATTCGGACTCTAAGGCCCTCAATAAAATTTTGGAAGTTAGAACTTTAAAGGAAAAATAAAAAAATTAATTCTTGTTGTGCTCGGCCGTTACAATATATGCGTCATTTGTTTGAGGAGGAGTATTCAATTGTTTGTCTATTTAATTTGATACGAACTATTTCAAATAGAAGATTTTAATTTATAAACTAATATCCTTACTGCTATTACTTCCCTTAGGATGTACATGAATTTTTCTCCAAACATTCACTTAGGTTTGAAGTTACTGATTAATCTATTATACAACTCAATGTACAAAGTAATGGTTAGTTTGTCAGTTTCACATGGCAGGTCAATTGCAAATAATTCATTGAACGGCTCAGTTCCATCCTCCATATGGCAAAACAGGACGCTCAAATTTTTGGACAGCCTTACAGTGTAAGACGTGAAGTAACTAAATTGCTATGTTGAGGGGTTGAAGGATTATAGACTGCTCTGCACTTCCTTTACCAAATATTTATTCTTGCCTCTTCTGTACTGCAGAGAGCTGCAGAACAATAAATTTTCAAATATTTTGGGAAGCATCGATCTCCCTCAGAACGTCACTGTCTGGTTTGCTTCTTCCTCTTAACTCTGATGTATCAAAATTAGTACAATATGGCTTTAATGAAGTTCTTTATCTTCAATCGGCATAATGCATGTGCACTACTCGATCCATTTGTGCAGAGTGAACCATCCCTTACATTACCTTTTTAAATCTGATGTTTGTCTTTTGTATAAATTTCTTTATGATGGGATATTTTGTATACATTTCACCATATGAATGAAATGGCTTTCTTTCCAATAAAAAAAAATTGATGTTTGTCCTTTTGAATTTCTGGCTTAAAGTATATTTGTGCACAGAGTACAACCAAACTTGACAAATTGATGTTATATTCTTTTTTATGGATGTTTTTTTCCCCTTAAATTTCAGGCTTCATGGAAATCCTGCTTGTTCTAATAACAGCCTGGTGCACTTCTGTGGATCTGAGCGTGAGGATATAATTGACATTCCAACAAATAAAAGTCTTGGCTGTTCTGATTCAATATGCCCACCTCCTTATGAATGTTACTCGGCAAAATGTCCCTCATTTTGTGTCTGTTCTGCACCTCTTCTTATTGGATATCGTTTGAAAAGTCCCGGATTCTCACTNTCTGTTCTGCACCTCTTCTTATTGGATATCGTTTGAAAAGTCCTGGATTCTCACGNTGAAAAGTCCCGGATTCTCACTTTTTAGTCCATATCAAAAAATGTTCGAGGAGTACCTGACCAATGGTCTTACATTACGTCTTGAACAATTGGACATTGGTTTTACTGTGTGGCAAAAGGGGCCTCGATTAAGAATGAACCTGAAGCTTTTCCCTCTACATGTTGCCGATAACAATAGTTCTCACGTGTTCAATGACAGCGAGGTTGTAAGAATTGTTTCCAAGTTTACAAGTTGGAACATTTCAGATAGCGACATATTTGGACCGTACGAACTTCTCAGCTTGACAATATCCGATATTTATAAGAATGGTTGGTCTTTAAAACTTTTCTGATGAGTTTTTTTAGGATACTATCTCTTATATTAAATTGTCAGAGACTGAAGATTGTTGTGAAAGCTCACTTTTACCTTTGGTTTTCATGTTACCTGTTGAAGCAATTGGAAAAAGGCTTCCTATACTTGTACTTCCTAATTATTATCTATTGATAGAAACCCTGTCTGTGGCATAGTGGTAACCTTTTATGCGCGTTTATTGGGTCATTGCTACATAAATGCATGTTTTGATTATCTTTGCGAAATACTTTTTCATCAATGTTTATTTATATTATTTTCTCTTTATAATGATGATTTTTTCCTCCTTATGATGCTTCTATATTTGTGGTTTCGTTTGCATTTTTAGTTAATGAGGCTTATGTCAATTAGTTATTTACAATAGAAAATATTCCTGATGACATGACATGATATGTTCTATGATATCAACCCTGCTGACTAGTTAAATGTTTCCATTTTGGCACCATCATACCCGATACTGAGCAGATGACTGCACTTATTTTACTTATAACTGGAAGACTATAATCAACAATTAATGTTATTTTTGGTTGGAGACCTACATGTTTAGCTATTATGATTATCACAATCCTTCAAATTTGATTTTTAGCTTAATTTTTTTTTTCTCGTATTGCAGTATCTATTCCACCACCATCTGATTCTACTATGAGTAAAGGGGCATTGGCTGGAATAATATTAGGAGCAATTGCTGGTGGAGCAACGCTATCTGCAATTATTTTTATTTTTATCGTAAGATTACGTGTGAGGGGCCACCACATCTCAAGAAGGCATCGT GGAAAACGACTCTAGGTGGCTTGATCGGAGTAGGTCCGACGGTTATTTTCTCTCTCAAAATCCTCTTTTCTCTCTCTTCTTTCTTTTCTTTCCTTTTTCTTTATTTTTTTCCCTAATTAACTCTGCTTTTAGGCTAATTATAAGTTTCAGAATTAGCTATGCATGGAAATAATCAAAATACCCATCTAGATCATTTTCTCATTTTTCACTATTTTCTTGGGATTTTTCTAAGCATTTTTTCCTTCTACCTCATCTTGAAATTCGGACTCTAAGGCCCTCAATAAAATTTTGGAAGTTAGAACTTTAAAGGAAAAATAAAAAAATTAATTCTTGTTGTGCTCGGCCGTTACAATATATGCGTCATTTGTTTGAGGAGGAGTATTCAATTGTTTGTCTATTTAATTTGATACGAACTATTTCAAATAGAAGATTTTAATTTATAAACTAATATCCTTACTGCTATTACTTCCCTTAGGATGTACATGAATTTTTCTCCAAACATTCACTTAGGTTTGAAGTTACTGATTAATCTATTATACAACTCAATGTACAAAGTAATGGTTAGTTTGTCAGTTTCACATGGCAGGTCAATTGCAAATAATTCATTGAACGGCTCAGTTCCATCCTCCATATGGCAAAACAGGACGCTCAAATTTTTGGACAGCCTTACAGTAGAGCTGCAGAACAATAAATTTTCAAATATTTTGGGAAGCATCGATCTCCCTCAGAACGTCACTGTCTGGCTTCATGGAAATCCTGCTTGTTCTAATAACAGCCTGGTGCACTTCTGTGGATCTGAGCTATCTATTCCACCACCATCTGATTCTACTATGAGTAAAGGGGCATTGGCTGGAATAATATTAGGAGCAATTGCTGGTGGAGCAACGCTATCTGCAATTATTTTTATTTTTATCGTAAGATTACGTGTGAGGGGCCACCACATCTCAAGAAGGCATCGT ATGTACATGAATTTTTCTCCAAACATTCACTTAGGTTTGAAGTTACTGATTAATCTATTATACAACTCAATGTACAAAGTAATGGTTAGTTTGTCAGTTTCACATGGCAGGTCAATTGCAAATAATTCATTGAACGGCTCAGTTCCATCCTCCATATGGCAAAACAGGACGCTCAAATTTTTGGACAGCCTTACAGTAGAGCTGCAGAACAATAAATTTTCAAATATTTTGGGAAGCATCGATCTCCCTCAGAACGTCACTGTCTGGCTTCATGGAAATCCTGCTTGTTCTAATAACAGCCTGGTGCACTTCTGTGGATCTGAGCTATCTATTCCACCACCATCTGATTCTACTATGAGTAAAGGGGCATTGGCTGGAATAATATTAGGAGCAATTGCTGGTGGAGCAACGCTATCTGCAATTATTTTTATTTTTATCGTAAGATTACGTGTGAGGGGCCACCACATCTCAAGAAGGCATCGT MYMNFSPNIHLGLKLLINLLYNSMYKVMVSLSVSHGRSIANNSLNGSVPSSIWQNRTLKFLDSLTVELQNNKFSNILGSIDLPQNVTVWLHGNPACSNNSLVHFCGSELSIPPPSDSTMSKGALAGIILGAIAGGATLSAIIFIFIVRLRVRGHHISRRHR Homology
BLAST of Cp4.1LG02g11370 vs. ExPASy Swiss-Prot
Match: C0LGD7 (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2) HSP 1 Score: 88.2 bits (217), Expect = 9.3e-17 Identity = 40/69 (57.97%), Postives = 51/69 (73.91%), Query Frame = 0
HSP 2 Score: 43.9 bits (102), Expect = 2.0e-03 Identity = 25/51 (49.02%), Postives = 37/51 (72.55%), Query Frame = 0
BLAST of Cp4.1LG02g11370 vs. ExPASy Swiss-Prot
Match: C0LGU1 (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana OX=3702 GN=At5g37450 PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 4.9e-10 Identity = 48/125 (38.40%), Postives = 66/125 (52.80%), Query Frame = 0
BLAST of Cp4.1LG02g11370 vs. ExPASy Swiss-Prot
Match: Q9LFG1 (Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At3g53590 OS=Arabidopsis thaliana OX=3702 GN=At3g53590 PE=1 SV=2) HSP 1 Score: 58.9 bits (141), Expect = 6.0e-08 Identity = 34/89 (38.20%), Postives = 54/89 (60.67%), Query Frame = 0
BLAST of Cp4.1LG02g11370 vs. NCBI nr
Match: XP_023524548.1 (probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 181 bits (458), Expect = 9.60e-50 Identity = 123/273 (45.05%), Postives = 124/273 (45.42%), Query Frame = 0
BLAST of Cp4.1LG02g11370 vs. NCBI nr
Match: KAG6607379.1 (putative LRR receptor-like serine/threonine-protein kinase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 177 bits (450), Expect = 4.01e-48 Identity = 122/273 (44.69%), Postives = 123/273 (45.05%), Query Frame = 0
BLAST of Cp4.1LG02g11370 vs. NCBI nr
Match: XP_022949163.1 (probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X2 [Cucurbita moschata]) HSP 1 Score: 175 bits (443), Expect = 2.81e-47 Identity = 121/273 (44.32%), Postives = 122/273 (44.69%), Query Frame = 0
BLAST of Cp4.1LG02g11370 vs. NCBI nr
Match: XP_022949162.1 (probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 [Cucurbita moschata]) HSP 1 Score: 175 bits (443), Expect = 2.95e-47 Identity = 121/273 (44.32%), Postives = 122/273 (44.69%), Query Frame = 0
BLAST of Cp4.1LG02g11370 vs. NCBI nr
Match: XP_022997705.1 (probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X2 [Cucurbita maxima]) HSP 1 Score: 170 bits (431), Expect = 1.21e-45 Identity = 119/273 (43.59%), Postives = 120/273 (43.96%), Query Frame = 0
BLAST of Cp4.1LG02g11370 vs. ExPASy TrEMBL
Match: A0A6J1GBA0 (probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452595 PE=3 SV=1) HSP 1 Score: 175 bits (443), Expect = 1.36e-47 Identity = 121/273 (44.32%), Postives = 122/273 (44.69%), Query Frame = 0
BLAST of Cp4.1LG02g11370 vs. ExPASy TrEMBL
Match: A0A6J1GB97 (probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452595 PE=3 SV=1) HSP 1 Score: 175 bits (443), Expect = 1.43e-47 Identity = 121/273 (44.32%), Postives = 122/273 (44.69%), Query Frame = 0
BLAST of Cp4.1LG02g11370 vs. ExPASy TrEMBL
Match: A0A6J1KAP8 (probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492587 PE=3 SV=1) HSP 1 Score: 170 bits (431), Expect = 5.87e-46 Identity = 119/273 (43.59%), Postives = 120/273 (43.96%), Query Frame = 0
BLAST of Cp4.1LG02g11370 vs. ExPASy TrEMBL
Match: A0A6J1KCB7 (probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492587 PE=3 SV=1) HSP 1 Score: 170 bits (431), Expect = 6.09e-46 Identity = 119/273 (43.59%), Postives = 120/273 (43.96%), Query Frame = 0
BLAST of Cp4.1LG02g11370 vs. ExPASy TrEMBL
Match: A0A0A0LSF5 (Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G028020 PE=4 SV=1) HSP 1 Score: 145 bits (367), Expect = 4.39e-39 Identity = 109/285 (38.25%), Postives = 120/285 (42.11%), Query Frame = 0
BLAST of Cp4.1LG02g11370 vs. TAIR 10
Match: AT1G06840.1 (Leucine-rich repeat protein kinase family protein ) HSP 1 Score: 88.2 bits (217), Expect = 6.6e-18 Identity = 40/69 (57.97%), Postives = 51/69 (73.91%), Query Frame = 0
HSP 2 Score: 43.9 bits (102), Expect = 1.4e-04 Identity = 25/51 (49.02%), Postives = 37/51 (72.55%), Query Frame = 0
BLAST of Cp4.1LG02g11370 vs. TAIR 10
Match: AT5G37450.1 (Leucine-rich repeat protein kinase family protein ) HSP 1 Score: 65.9 bits (159), Expect = 3.5e-11 Identity = 48/125 (38.40%), Postives = 66/125 (52.80%), Query Frame = 0
BLAST of Cp4.1LG02g11370 vs. TAIR 10
Match: AT5G01950.1 (Leucine-rich repeat protein kinase family protein ) HSP 1 Score: 60.5 bits (145), Expect = 1.5e-09 Identity = 43/122 (35.25%), Postives = 67/122 (54.92%), Query Frame = 0
BLAST of Cp4.1LG02g11370 vs. TAIR 10
Match: AT3G53590.1 (Leucine-rich repeat protein kinase family protein ) HSP 1 Score: 45.1 bits (105), Expect = 6.4e-05 Identity = 27/73 (36.99%), Postives = 45/73 (61.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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