Cp4.1LG02g11290 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGATGGAGGAGGGTTCAGAAAGGCAAGAATGGAGCTTGAAGCACTCTACGAGGGAGTGCCAGATGAGTCTGTGAATCTCACCTTCCGACATCTCACAGACGTCAATGTTCAATCCAGAGCCAACCCATCAATCCAAATCCTAGGGAAGAAAGTGCATAGAATGTTTGGGAAGAAAATTCAGCCACAGGTTAATCATTGAACCCTCTGTCAGAGGAATACGATTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGGGCGTCCCCAAAAGGCCTCATACCAATGGAGTTAGTATTTCTCACTTATAAACCCATGATCATTCCCTAAATTAGTTGACGTGGGATTTCCATCATCCAACACCCTCCACCTTCATAGGAATTGATTTAAAAATTTATTAAACATTAGAGACTAAAATTGAATGGGGTATCATCCTTCATCAGGTACATAGGGGAGGCAGGAGATGTGGGGTGCTTCGGTTGGAGGTACTCAACTGCGGTGAAGCATGCAGAGCTTAAGTGGGCGGAGAAAGGGCCTCGCCGGAGAGGAGAGAGAGCCCCACGGAGAGGGTGCGGCGGCGGTGGCGGTGGGGTAACGAACTCCATGAGTATGATGTCGGCAAGTCAGAGCCCATGGGCACCGGCCACAACCAGTGTGGATATTTCCGCCGTTTACAGCTCTCGTTTCGCCGCCATGTCGTCCCCTCATTCTCCGGCTCACCGCCACCATTTACCGTTTTAG ATGGATGATGGAGGAGGGTTCAGAAAGGCAAGAATGGAGCTTGAAGCACTCTACGAGGGAGTGCCAGATGAGTACATAGGGGAGGCAGGAGATGTGGGGTGCTTCGGTTGGAGGTACTCAACTGCGGTGAAGCATGCAGAGCTTAAGTGGGCGGAGAAAGGGCCTCGCCGGAGAGGAGAGAGAGCCCCACGGAGAGGGTGCGGCGGCGGTGGCGGTGGGGTAACGAACTCCATGAGTATGATGTCGGCAAGTCAGAGCCCATGGGCACCGGCCACAACCAGTGTGGATATTTCCGCCGTTTACAGCTCTCGTTTCGCCGCCATGTCGTCCCCTCATTCTCCGGCTCACCGCCACCATTTACCGTTTTAG ATGGATGATGGAGGAGGGTTCAGAAAGGCAAGAATGGAGCTTGAAGCACTCTACGAGGGAGTGCCAGATGAGTACATAGGGGAGGCAGGAGATGTGGGGTGCTTCGGTTGGAGGTACTCAACTGCGGTGAAGCATGCAGAGCTTAAGTGGGCGGAGAAAGGGCCTCGCCGGAGAGGAGAGAGAGCCCCACGGAGAGGGTGCGGCGGCGGTGGCGGTGGGGTAACGAACTCCATGAGTATGATGTCGGCAAGTCAGAGCCCATGGGCACCGGCCACAACCAGTGTGGATATTTCCGCCGTTTACAGCTCTCGTTTCGCCGCCATGTCGTCCCCTCATTCTCCGGCTCACCGCCACCATTTACCGTTTTAG MDDGGGFRKARMELEALYEGVPDEYIGEAGDVGCFGWRYSTAVKHAELKWAEKGPRRRGERAPRRGCGGGGGGVTNSMSMMSASQSPWAPATTSVDISAVYSSRFAAMSSPHSPAHRHHLPF Homology
BLAST of Cp4.1LG02g11290 vs. NCBI nr
Match: XP_023524484.1 (uncharacterized protein LOC111788385 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 203 bits (516), Expect = 2.14e-65 Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g11290 vs. NCBI nr
Match: KAG6607374.1 (hypothetical protein SDJN03_00716, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 202 bits (515), Expect = 2.64e-62 Identity = 101/118 (85.59%), Postives = 103/118 (87.29%), Query Frame = 0
BLAST of Cp4.1LG02g11290 vs. NCBI nr
Match: XP_022948781.1 (extra-large guanine nucleotide-binding protein 3-like [Cucurbita moschata] >XP_022948782.1 extra-large guanine nucleotide-binding protein 3-like [Cucurbita moschata]) HSP 1 Score: 197 bits (502), Expect = 2.57e-60 Identity = 101/120 (84.17%), Postives = 103/120 (85.83%), Query Frame = 0
BLAST of Cp4.1LG02g11290 vs. NCBI nr
Match: KAG7037043.1 (hypothetical protein SDJN02_00664, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 189 bits (480), Expect = 4.54e-57 Identity = 97/118 (82.20%), Postives = 99/118 (83.90%), Query Frame = 0
BLAST of Cp4.1LG02g11290 vs. NCBI nr
Match: XP_008457288.1 (PREDICTED: extra-large guanine nucleotide-binding protein 3-like [Cucumis melo] >KAA0059975.1 extra-large guanine nucleotide-binding protein 3-like [Cucumis melo var. makuwa] >TYJ97234.1 extra-large guanine nucleotide-binding protein 3-like [Cucumis melo var. makuwa]) HSP 1 Score: 155 bits (393), Expect = 6.95e-44 Identity = 82/120 (68.33%), Postives = 91/120 (75.83%), Query Frame = 0
BLAST of Cp4.1LG02g11290 vs. ExPASy TrEMBL
Match: A0A6J1GA56 (extra-large guanine nucleotide-binding protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111452347 PE=4 SV=1) HSP 1 Score: 197 bits (502), Expect = 1.24e-60 Identity = 101/120 (84.17%), Postives = 103/120 (85.83%), Query Frame = 0
BLAST of Cp4.1LG02g11290 vs. ExPASy TrEMBL
Match: A0A5A7V259 (Extra-large guanine nucleotide-binding protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00240 PE=4 SV=1) HSP 1 Score: 155 bits (393), Expect = 3.36e-44 Identity = 82/120 (68.33%), Postives = 91/120 (75.83%), Query Frame = 0
BLAST of Cp4.1LG02g11290 vs. ExPASy TrEMBL
Match: A0A1S3C6F3 (extra-large guanine nucleotide-binding protein 3-like OS=Cucumis melo OX=3656 GN=LOC103497015 PE=4 SV=1) HSP 1 Score: 155 bits (393), Expect = 3.36e-44 Identity = 82/120 (68.33%), Postives = 91/120 (75.83%), Query Frame = 0
BLAST of Cp4.1LG02g11290 vs. ExPASy TrEMBL
Match: A0A0A0LPU0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G026000 PE=4 SV=1) HSP 1 Score: 154 bits (389), Expect = 6.50e-44 Identity = 81/120 (67.50%), Postives = 90/120 (75.00%), Query Frame = 0
BLAST of Cp4.1LG02g11290 vs. ExPASy TrEMBL
Match: A0A6J1DVT5 (uncharacterized protein LOC111024922 OS=Momordica charantia OX=3673 GN=LOC111024922 PE=4 SV=1) HSP 1 Score: 127 bits (319), Expect = 1.75e-33 Identity = 71/121 (58.68%), Postives = 85/121 (70.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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