Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACATCTTATACCCCTGCCGCCGCTTGGCGTATAAGCGATAGTTGCAAAACCCAAAACCTCGCGTTCAAGTTCGTCCCCATCTCCGACTGGCGGAAAATGTTGCGATCAATTCTCAGAGCAGCAGCCGCCGCAGCCTCTAGACACCAGCCGTACAATCGGAATCCCTCTCCGATCCTATCTTTTACTTCAAATTACTCAGCTAAGGCAACCAAATCGGCCGTTAAGAAGGCGCCCAAGAAGGGCAAGTCCAAGGGCGACGGCAAAGCCACCGATGATCCCTCCGCCTCCGCTGCTGCTTCCGACGACTTAGATGCGGCGCTTTTTGATGATAAATCTCGATCCCGACGTCTTGCTGCCGAGGAAAATGATCACTCACTCGACGTTGGCCCAAATGGCCGCCCTCTCTTTACCTCCGCATCTTCACTCTCACAGCTCACTCGCAAGGATGCAGGCACTTATTTCAAATTCAAGTACGTATGTTTTCTACATTGTTTATGAGTGAATGTTTATTGGAATATTTATTCGTTTCTTTACGAAATGGAAGTATGGAAGGACTAAATGAGGCACTGCCTGAGGGTTTGCCTTTGGGAATGGTCAAGGAGTTCGAGGATTCTATGCGAAGTGCTCTGCTTGTGCGGCAAAATTTTTTGGATCTTCGCGACAATTTCAGGCGTGTGGTTGATCCTTCATTGTTGTCGCCGGCTGGTATTGCTTTTCTTCTACTATCTTTTCTTTGGCGGTGGGGTCGAACAAATGTATTCATGTTTTTTCTTGCTGCTATTTCAATTCAAACATTCAGGTTCAAATATTAGAAAACAGATCGTATTGGATGGTCCGGTCAATAGTGGAAAGAGCATTGCACTCGCCATGCTTGTTCACTGGGCTCGCGATGAAGGTTGGCTAGTTTTTTATGTTCCTAGTGGGCGTCGGTGGACTCATGGAGGATTCTTCTATAAAAACGCTGAAACAGGACTTTGGGATACACCCGTTCAGGCTGAAGATGTTCTGAGAGTGAGGACCTTTTCCTGCTAATTAAGAGTTAGAAGTATGGTGTGCGTGTGTGTGTTTTTCAGGATCTTCTAGTGCATTTGTCATGAATATGCAGGTCTCGAACATCGTATGTGCATCGAATGCCAGTTTAAGGGGTTGTTTTCTAATTCTATTGATAAATGTTAATTCTTACACACCCCATTGAGAATCTTGACAAGGGAAATGATGTTCATGATCATGATTCTTTATTTGACTGCGAAATGTTTCATGCATAGTGTTTACTATTTTGTGATTAGCTTTCTGGAGATCAAGTGAGGACTGTGGATAATATGTAAAGCTGAAACAGTTGACATATTTACTTTTCATTGGCGGACTGGTTTTGACCAGGATTTTCTGAAATACAATGAGACCCGCTTAAGACAACTGCCATGTCAATTATCTGATCCTATACCATTGGGAGAGGGTGTTGGTGTCAGGATGAAGAAAGGTGCTGATTCCATGATGATGCCTGAGGGTTCAACTTTATATGACTTAATTGATACTGGAATCAAGCACACTCATGCAGCTGTTGGGGTGGTAGTTCGTTTAAGAAAAGAATTATCGCTTGTGAAAGATATTCCTGTGCTTTTTGCTATTGATCAAGTGAGACACAAAACTACATCTTCCATTTCTTTGATTTCTAAGATCAAGTTCCATTTCTTTGATTGCTTATTCGTGGCTGTTTCTTTTTGTTCAGTATAACAACTGGTTTACATTCAGTGAATTTGAAGAACCAGTGACCGTTCGTTCTACTCGACCAATACACGCTAGAGAACTCGCAATGGTTAGTACGAACTACTTGCTTGGATTGATTTTTCTTTTCTGTTTCTACTCGCTAACATTCATTGCAATACATTGGATGTTCCTGGAATATCTTGTTCAGTTTGTATGTGTTTGTGTTTTTTCTTGGTTCAACATCTTTTACTTCCACCAAAATTACCTTGTGTGTTTAAGCATCGCATTGGAACTGGTCCCTATCTCCTGTCTTGAAACAAGGGAGAGCATACATTAAATGTGAAATGTTCTTTTACATCTTTTCATGGAAATCTTAGGTAGACTGCATTTTCAGCGTTCAGCATATACTCCTTGCTCATGGAACTTCAGACTTTTAAATTTTGATTATCGGGTCCATGGCCTTCTAGTTTAGTTGGAATTAAACATTTTTCCCTGTTACCTACAGTTAAATTAGCTAGCCTTTATACTTCCATCATTTCAGTAGCCTTTTTATAGTTTTGATTCCATTGCCTAAAAAAATGTAATTTTTGTGGTAAAACTCATTTCCCTCATTTATTTTTCTGGTTCAATGTTCGGGGACTTAAAAACAACAAATGGAATGATTTGATCCAAAAATGAAACTGAAGTTGAAAGAACGATTAAATTAACAATTTTTCTGAATACAAATGAAGAAATATAATAGTTGGGCTTAGGATTTATTCTTCTCTTTTTTGTTAGATAGGTTTCTTTGGGAGTATTTATTTGTTATGACTGCACATTTGGTTTCAGCCTTGTTTTTTTCTTCCATATTTTTCTCTTTTTTATCCCTTTCTTTTTCCTATATATCATTTATATTAGTTTTTGAAACCTACCATTCAATTTGATGTGAAATCTAATAGGTCTTAGATTGCTAAAAAGGGTTCAAGGCAGTTGGGAGTATTTAGAATCATGGAGTAAAATGAGTTGACCTAGTGACGAACAAGGGTTGATGTAAGTGATTAAATATTTAAAGGGAATAGTTTCAAACTACGGTGACCATTGAGCTAATATTTATTATCCTATTGAGTTTCCTACGCTTTCCTTTTATTTGTTCTCAATAAATTCATGTCTTCATAGATGGGCAGTTGACTTGTGAGACTAGTCAAGGTACAAGATGACTCGAACACTCATGGATTTATATATAAAGAAAGATTATTCTGAATCCTGGAGTAAAGATAGAATGTTGATGACTCATTTAGTGAATAGTATGTTATTGGCTGGGCACAACTCACCCTAGCTACAAATGAAAAAGTGAAGCTTATTCATAAAAGAAAAAATGAAAAAGAAAGCCAAAGAAGAAGGTACCTTTACAATGCCAATAGTTCAGAATTTTGGATTGAGATGGTTGGAGGTCCAAAATTTTAGGTTAGACAAGTTTTAACACAAGTGTTGTTTCTAAGTCTCTTTTAACTTCTAATTTTGTATTTAATAGATATCTAATCCTTGAGATATTTATTAGTTTCAAGAACTTGTTAGACTCAAAATTAATAGTTTAAGTACCTATAAATGCTTTTTAAAGTTCGGGCACCTATTAGACATAACATTGAAACTTTAGGAGCCTTTTAGATACAACTAATATCGAAACTTTAGGAGCCTTTTAGATACAATGTTGAATGTTGAAGCTTTTACCTTGTATAATGATTTTGAAATGATTCTTAAATTCTTATCTGCCTTGGTTTTTTTGTTTCTCAATCAATGATAAGAATTACAATTTTTTTCACAGGTAAAAGCTTTTAGGTCTATGATGCATGACGACATGATGGTTGGTGCTTTCTCTCATTCAACTGCTGTTGGAAAGTTGCGTCAAGACTTGCCAGATGTTCCTTTAGGTGCACGTGTTAATTTCCCTCGCTACAATCTTGATGAAGCAGCTTCTGTTTTTCACTATTACCTCAGGTATGCTTATTTTGTTGTTATTTTGAGAAGACACTGATTTCATTGAAAAAAGAAAATTAAGAATGTTACATGAAGAGAAAAAGGAATCCCTACAAAAGCTTTGATTAGTTAAGGATTTAGAATAAGCCCCTATTTGGCTATTAGAGGAGACGGAGCATTTAGAAACGAAAAGCTCCTCTCATCGAATCTTATAGAGGCGATAGTAAGTTGCAGAAAGAGTTAGCTGTTGGATGGCATTGCCAACTCCCATCTCTTGATTTATATCGTAAAAAAAAATTTCTTTTGAAGTTCTGTAATTTTATAAGATATAAATGCAGTACTTGACTTAACAATACCTGATGAACTAGGCTTGTTTATTAGGGGGACCACAACCTACTTAGGAGAGTCCTGTAGACTCGTTGAGTTGAAAGCAACCTATTACAGGTTAAAACCGTCCAAAATTTCTCTAGTACACTTCCTTGTAAGAGAACAATGGAAGAAACAAGTGATCATGTTTTGTATCGGTATGCTGGTGGGTAGGACATCCTTTCGGCATCATATGTCTATTAATTTTCTTCTAGAGATAAAACCAGCCTCCAGAAAATCTAAGTATAACTAATTTTTCTTCAGAAACTTGTGTCGCAAATTCAGAAGTCATAATACTAATTTGTTGCAGTGGTCGGGATAACAGCTTATAATATTAGAAACAAAATTACTTCAGTGAAAAACTGAAGTATACAAGGGAGTGAAGTCAAGGGAAGTATAATGATCCTTTACTACAATATGTGGTGCTTTGCGAATAGTTTGAAAAGGAAGAGTATGAAATGCTCCTAGAAGAAAGAAAAGCTACTGTCTTAAAACTATCAAGAGTTCTATCAATCCTTTGGAGATTCTGTTGTTTCAGATGAGAGTTTCATTGGCCAATTGAATAGGTAGGTAGGTACTTTCCATGACAGGACCTCTTTTAACTGTAAAAGGTCATAGTAATTGACGTCTGGTTAAGTACAGTCTGATCTTTTATGTGAGTCTTTTCCTATGAACAACATTCAGTACTTTTGAGGGGATTGTTTTTTTCTTTATTTCTTTTTATTGAAATTCTTGAACTGTAACATGAATGTCACTCATCGCAATGTAGTTTGCAATCTTCAGTTGCAAAGGTATACCTGCTTGGTCGTTTATATGAATGTTGCTGTGTGGGGTGCTTTGAGATTGTTACCCAAGTTTGTGATTCGATTCGTAAAACGAACTGTAGAATGCATTGCTCAGTTAGTTGTTGATCATTTTGCTTGACAGACAAAGACTGATACGCCGCGAAGCCTTCTCAGAAGATGCCTGGAAAAAGGTATACTATTTGTCAAATGGAAATGGAGCAGAAATGCGGTGGTTGGTACCATTGATGCGGTGACAATGACACCAATGGGGCTAAGTGTCCTCCTTGCCTGTTCACATCGACTGGACACGGTACCATCGCTTAGAACTCATGCATATTTCTTCACTTGGAATTAGATATCCCTAACCCTCACAAGATGTGCGACATATCATAGGGCATTCTGGCCTAAGATACCGAGTCGAGTGTTTGTATTTGTAAGTTTAGCGCACGCACNCGACATATCATAGGGCATTCTGGCCTAAAATACCGAGTCGAGTGTTTGTATTTGTAAGTTTAGCGCACGCACATCGGAGAAGTAACCTTTTCTACGGCACAATTTTTATTGCCTACTTGGGCTACACTTATCATCTTGTGTGTTCTTTCATTAATATATATTCTAAATACATTCTTCAATAAGGTGTTATCTTTTAAGGAAGAACTTGAGATGCCCAATTTAGGCCGTTAGTTTTGCAGGCCACGTCCATACTCTTTAGTACTTATATATAGTATGGTTAGAGTATCTTATATATTGTATTTTAACGATGGCGTGAATGTATTAGACTATATTCTATTTTGATCTCTAAA
mRNA sequence
ATGACATCTTATACCCCTGCCGCCGCTTGGCGTATAAGCGATAGTTGCAAAACCCAAAACCTCGCGTTCAAGTTCGTCCCCATCTCCGACTGGCGGAAAATGTTGCGATCAATTCTCAGAGCAGCAGCCGCCGCAGCCTCTAGACACCAGCCGTACAATCGGAATCCCTCTCCGATCCTATCTTTTACTTCAAATTACTCAGCTAAGGCAACCAAATCGGCCGTTAAGAAGGCGCCCAAGAAGGGCAAGTCCAAGGGCGACGGCAAAGCCACCGATGATCCCTCCGCCTCCGCTGCTGCTTCCGACGACTTAGATGCGGCGCTTTTTGATGATAAATCTCGATCCCGACGTCTTGCTGCCGAGGAAAATGATCACTCACTCGACGTTGGCCCAAATGGCCGCCCTCTCTTTACCTCCGCATCTTCACTCTCACAGCTCACTCGCAAGGATGCAGGCACTTATTTCAAATTCAATATGGAAGGACTAAATGAGGCACTGCCTGAGGGTTTGCCTTTGGGAATGGTCAAGGAGTTCGAGGATTCTATGCGAAGTGCTCTGCTTGTGCGGCAAAATTTTTTGGATCTTCGCGACAATTTCAGGCGTGTGGTTGATCCTTCATTGTTGTCGCCGGCTGGTTCAAATATTAGAAAACAGATCGTATTGGATGGTCCGGTCAATAGTGGAAAGAGCATTGCACTCGCCATGCTTGTTCACTGGGCTCGCGATGAAGGTTGGCTAGTTTTTTATGTTCCTAGTGGGCGTCGGTGGACTCATGGAGGATTCTTCTATAAAAACGCTGAAACAGGACTTTGGGATACACCCGTTCAGGCTGAAGATGTTCTGAGAGATTTTCTGAAATACAATGAGACCCGCTTAAGACAACTGCCATGTCAATTATCTGATCCTATACCATTGGGAGAGGGTGTTGGTGTCAGGATGAAGAAAGGTGCTGATTCCATGATGATGCCTGAGGGTTCAACTTTATATGACTTAATTGATACTGGAATCAAGCACACTCATGCAGCTGTTGGGGTGGTAGTTCGTTTAAGAAAAGAATTATCGCTTGTGAAAGATATTCCTGTGCTTTTTGCTATTGATCAATATAACAACTGGTTTACATTCAGTGAATTTGAAGAACCAGTGACCGTTCGTTCTACTCGACCAATACACGCTAGAGAACTCGCAATGGTAAAAGCTTTTAGGTCTATGATGCATGACGACATGATGGTTGGTGCTTTCTCTCATTCAACTGCTGTTGGAAAGTTGCGTCAAGACTTGCCAGATGTTCCTTTAGGTGCACGTGTTAATTTCCCTCGCTACAATCTTGATGAAGCAGCTTCTGTTTTTCACTATTACCTCAGACAAAGACTGATACGCCGCGAAGCCTTCTCAGAAGATGCCTGGAAAAAGGTATACTATTTGTCAAATGGAAATGGAGCAGAAATGCGGTGGTTGGTACCATTGATGCGGTGACAATGACACCAATGGGGCTAAGTGTCCTCCTTGCCTGTTCACATCGACTGGACACGGTACCATCGCTTAGAACTCATGCATATTTCTTCACTTGGAATTAGATATCCCTAACCCTCACAAGATGTGCGACATATCATAGGGCATTCTGGCCTAAAATACCGAGTCGAGTGTTTGTATTTGTAAGTTTAGCGCACGCACATCGGAGAAGTAACCTTTTCTACGGCACAATTTTTATTGCCTACTTGGGCTACACTTATCATCTTGTGTGTTCTTTCATTAATATATATTCTAAATACATTCTTCAATAAGGTGTTATCTTTTAAGGAAGAACTTGAGATGCCCAATTTAGGCCGTTAGTTTTGCAGGCCACGTCCATACTCTTTAGTACTTATATATAGTATGGTTAGAGTATCTTATATATTGTATTTTAACGATGGCGTGAATGTATTAGACTATATTCTATTTTGATCTCTAAA
Coding sequence (CDS)
ATGACATCTTATACCCCTGCCGCCGCTTGGCGTATAAGCGATAGTTGCAAAACCCAAAACCTCGCGTTCAAGTTCGTCCCCATCTCCGACTGGCGGAAAATGTTGCGATCAATTCTCAGAGCAGCAGCCGCCGCAGCCTCTAGACACCAGCCGTACAATCGGAATCCCTCTCCGATCCTATCTTTTACTTCAAATTACTCAGCTAAGGCAACCAAATCGGCCGTTAAGAAGGCGCCCAAGAAGGGCAAGTCCAAGGGCGACGGCAAAGCCACCGATGATCCCTCCGCCTCCGCTGCTGCTTCCGACGACTTAGATGCGGCGCTTTTTGATGATAAATCTCGATCCCGACGTCTTGCTGCCGAGGAAAATGATCACTCACTCGACGTTGGCCCAAATGGCCGCCCTCTCTTTACCTCCGCATCTTCACTCTCACAGCTCACTCGCAAGGATGCAGGCACTTATTTCAAATTCAATATGGAAGGACTAAATGAGGCACTGCCTGAGGGTTTGCCTTTGGGAATGGTCAAGGAGTTCGAGGATTCTATGCGAAGTGCTCTGCTTGTGCGGCAAAATTTTTTGGATCTTCGCGACAATTTCAGGCGTGTGGTTGATCCTTCATTGTTGTCGCCGGCTGGTTCAAATATTAGAAAACAGATCGTATTGGATGGTCCGGTCAATAGTGGAAAGAGCATTGCACTCGCCATGCTTGTTCACTGGGCTCGCGATGAAGGTTGGCTAGTTTTTTATGTTCCTAGTGGGCGTCGGTGGACTCATGGAGGATTCTTCTATAAAAACGCTGAAACAGGACTTTGGGATACACCCGTTCAGGCTGAAGATGTTCTGAGAGATTTTCTGAAATACAATGAGACCCGCTTAAGACAACTGCCATGTCAATTATCTGATCCTATACCATTGGGAGAGGGTGTTGGTGTCAGGATGAAGAAAGGTGCTGATTCCATGATGATGCCTGAGGGTTCAACTTTATATGACTTAATTGATACTGGAATCAAGCACACTCATGCAGCTGTTGGGGTGGTAGTTCGTTTAAGAAAAGAATTATCGCTTGTGAAAGATATTCCTGTGCTTTTTGCTATTGATCAATATAACAACTGGTTTACATTCAGTGAATTTGAAGAACCAGTGACCGTTCGTTCTACTCGACCAATACACGCTAGAGAACTCGCAATGGTAAAAGCTTTTAGGTCTATGATGCATGACGACATGATGGTTGGTGCTTTCTCTCATTCAACTGCTGTTGGAAAGTTGCGTCAAGACTTGCCAGATGTTCCTTTAGGTGCACGTGTTAATTTCCCTCGCTACAATCTTGATGAAGCAGCTTCTGTTTTTCACTATTACCTCAGACAAAGACTGATACGCCGCGAAGCCTTCTCAGAAGATGCCTGGAAAAAGGTATACTATTTGTCAAATGGAAATGGAGCAGAAATGCGGTGGTTGGTACCATTGATGCGGTGA
Protein sequence
MTSYTPAAAWRISDSCKTQNLAFKFVPISDWRKMLRSILRAAAAAASRHQPYNRNPSPILSFTSNYSAKATKSAVKKAPKKGKSKGDGKATDDPSASAAASDDLDAALFDDKSRSRRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDAGTYFKFNMEGLNEALPEGLPLGMVKEFEDSMRSALLVRQNFLDLRDNFRRVVDPSLLSPAGSNIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFYKNAETGLWDTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVRMKKGADSMMMPEGSTLYDLIDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHYYLRQRLIRREAFSEDAWKKVYYLSNGNGAEMRWLVPLMR
Homology
BLAST of Cp4.1LG02g11100 vs. NCBI nr
Match:
XP_023525695.1 (uncharacterized protein LOC111789228 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 907 bits (2345), Expect = 0.0
Identity = 457/457 (100.00%), Postives = 457/457 (100.00%), Query Frame = 0
Query: 34 MLRSILRAAAAAASRHQPYNRNPSPILSFTSNYSAKATKSAVKKAPKKGKSKGDGKATDD 93
MLRSILRAAAAAASRHQPYNRNPSPILSFTSNYSAKATKSAVKKAPKKGKSKGDGKATDD
Sbjct: 1 MLRSILRAAAAAASRHQPYNRNPSPILSFTSNYSAKATKSAVKKAPKKGKSKGDGKATDD 60
Query: 94 PSASAAASDDLDAALFDDKSRSRRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDAGT 153
PSASAAASDDLDAALFDDKSRSRRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDAGT
Sbjct: 61 PSASAAASDDLDAALFDDKSRSRRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDAGT 120
Query: 154 YFKFNMEGLNEALPEGLPLGMVKEFEDSMRSALLVRQNFLDLRDNFRRVVDPSLLSPAGS 213
YFKFNMEGLNEALPEGLPLGMVKEFEDSMRSALLVRQNFLDLRDNFRRVVDPSLLSPAGS
Sbjct: 121 YFKFNMEGLNEALPEGLPLGMVKEFEDSMRSALLVRQNFLDLRDNFRRVVDPSLLSPAGS 180
Query: 214 NIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFYKNAETGLWDT 273
NIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFYKNAETGLWDT
Sbjct: 181 NIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFYKNAETGLWDT 240
Query: 274 PVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVRMKKGADSMMMPEGSTLYDLID 333
PVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVRMKKGADSMMMPEGSTLYDLID
Sbjct: 241 PVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVRMKKGADSMMMPEGSTLYDLID 300
Query: 334 TGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHARE 393
TGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHARE
Sbjct: 301 TGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHARE 360
Query: 394 LAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHYYL 453
LAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHYYL
Sbjct: 361 LAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHYYL 420
Query: 454 RQRLIRREAFSEDAWKKVYYLSNGNGAEMRWLVPLMR 490
RQRLIRREAFSEDAWKKVYYLSNGNGAEMRWLVPLMR
Sbjct: 421 RQRLIRREAFSEDAWKKVYYLSNGNGAEMRWLVPLMR 457
BLAST of Cp4.1LG02g11100 vs. NCBI nr
Match:
XP_022949341.1 (uncharacterized protein LOC111452726 [Cucurbita moschata])
HSP 1 Score: 899 bits (2323), Expect = 0.0
Identity = 451/457 (98.69%), Postives = 455/457 (99.56%), Query Frame = 0
Query: 34 MLRSILRAAAAAASRHQPYNRNPSPILSFTSNYSAKATKSAVKKAPKKGKSKGDGKATDD 93
MLRSILRAAAAA SRHQPYNRNPSPILSFTSNYSAK TKSAVKKAPKKGKSKGDGKATDD
Sbjct: 1 MLRSILRAAAAATSRHQPYNRNPSPILSFTSNYSAKTTKSAVKKAPKKGKSKGDGKATDD 60
Query: 94 PSASAAASDDLDAALFDDKSRSRRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDAGT 153
PSASAAASDDLDAALFDDKSR+RRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDAG+
Sbjct: 61 PSASAAASDDLDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDAGS 120
Query: 154 YFKFNMEGLNEALPEGLPLGMVKEFEDSMRSALLVRQNFLDLRDNFRRVVDPSLLSPAGS 213
YFKFNMEGLNEALPEGLPLGMVKEFEDSMRSA+LVRQNFLDLRDNFRRVVDPSLLSPAGS
Sbjct: 121 YFKFNMEGLNEALPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPAGS 180
Query: 214 NIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFYKNAETGLWDT 273
NIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFF+KNAETGLWDT
Sbjct: 181 NIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLWDT 240
Query: 274 PVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVRMKKGADSMMMPEGSTLYDLID 333
PVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVRMKKGADSMMMPEGSTLYDLID
Sbjct: 241 PVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVRMKKGADSMMMPEGSTLYDLID 300
Query: 334 TGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHARE 393
TGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHARE
Sbjct: 301 TGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHARE 360
Query: 394 LAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHYYL 453
LAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHYYL
Sbjct: 361 LAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHYYL 420
Query: 454 RQRLIRREAFSEDAWKKVYYLSNGNGAEMRWLVPLMR 490
RQRLIRREAFSEDAWKKVYYLSNGNGAEMRWLVPLMR
Sbjct: 421 RQRLIRREAFSEDAWKKVYYLSNGNGAEMRWLVPLMR 457
BLAST of Cp4.1LG02g11100 vs. NCBI nr
Match:
KAG6607352.1 (28S ribosomal protein S29, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 895 bits (2314), Expect = 0.0
Identity = 452/457 (98.91%), Postives = 453/457 (99.12%), Query Frame = 0
Query: 34 MLRSILRAAAAAASRHQPYNRNPSPILSFTSNYSAKATKSAVKKAPKKGKSKGDGKATDD 93
MLRSILRAAAAA SRHQPYNRNPSPILSFTSNYSAK TKSAVKKAPKKGKSKGDGKA DD
Sbjct: 1 MLRSILRAAAAATSRHQPYNRNPSPILSFTSNYSAKTTKSAVKKAPKKGKSKGDGKANDD 60
Query: 94 PSASAAASDDLDAALFDDKSRSRRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDAGT 153
PSASAA SDDLDAALFDDKSR+RRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDAGT
Sbjct: 61 PSASAA-SDDLDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDAGT 120
Query: 154 YFKFNMEGLNEALPEGLPLGMVKEFEDSMRSALLVRQNFLDLRDNFRRVVDPSLLSPAGS 213
YFKFNMEGLNEALPEGLPLGMVKEFEDSMRSALLVRQNFLDLRDNFRRVVDPSLLSPAGS
Sbjct: 121 YFKFNMEGLNEALPEGLPLGMVKEFEDSMRSALLVRQNFLDLRDNFRRVVDPSLLSPAGS 180
Query: 214 NIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFYKNAETGLWDT 273
NIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFYKNAETGLWDT
Sbjct: 181 NIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFYKNAETGLWDT 240
Query: 274 PVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVRMKKGADSMMMPEGSTLYDLID 333
PVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVRMKKGADSMMMPEGSTLYDLID
Sbjct: 241 PVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVRMKKGADSMMMPEGSTLYDLID 300
Query: 334 TGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHARE 393
TGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHARE
Sbjct: 301 TGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHARE 360
Query: 394 LAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHYYL 453
LAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHYYL
Sbjct: 361 LAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHYYL 420
Query: 454 RQRLIRREAFSEDAWKKVYYLSNGNGAEMRWLVPLMR 490
RQRLIRREAFSEDAWKKVYYLSNGNGAEMRWLVPLMR
Sbjct: 421 RQRLIRREAFSEDAWKKVYYLSNGNGAEMRWLVPLMR 456
BLAST of Cp4.1LG02g11100 vs. NCBI nr
Match:
KAG7037027.1 (28S ribosomal protein S29, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 893 bits (2307), Expect = 0.0
Identity = 451/457 (98.69%), Postives = 452/457 (98.91%), Query Frame = 0
Query: 34 MLRSILRAAAAAASRHQPYNRNPSPILSFTSNYSAKATKSAVKKAPKKGKSKGDGKATDD 93
MLRSILRAA AA SRHQPYNRN SPILSFTSNYSAK TKSAVKKAPKKGKSKGDGKATDD
Sbjct: 1 MLRSILRAAVAATSRHQPYNRNTSPILSFTSNYSAKTTKSAVKKAPKKGKSKGDGKATDD 60
Query: 94 PSASAAASDDLDAALFDDKSRSRRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDAGT 153
PSASAA SDDLDAALFDDKSR+RRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDAGT
Sbjct: 61 PSASAA-SDDLDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDAGT 120
Query: 154 YFKFNMEGLNEALPEGLPLGMVKEFEDSMRSALLVRQNFLDLRDNFRRVVDPSLLSPAGS 213
YFKFNMEGLNEALPEGLPLGMVKEFEDSMRSALLVRQNFLDLRDNFRRVVDPSLLSPAGS
Sbjct: 121 YFKFNMEGLNEALPEGLPLGMVKEFEDSMRSALLVRQNFLDLRDNFRRVVDPSLLSPAGS 180
Query: 214 NIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFYKNAETGLWDT 273
NIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFYKNAETGLWDT
Sbjct: 181 NIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFYKNAETGLWDT 240
Query: 274 PVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVRMKKGADSMMMPEGSTLYDLID 333
PVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVRMKKGADSMMMPEGSTLYDLID
Sbjct: 241 PVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVRMKKGADSMMMPEGSTLYDLID 300
Query: 334 TGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHARE 393
TGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHARE
Sbjct: 301 TGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHARE 360
Query: 394 LAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHYYL 453
LAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHYYL
Sbjct: 361 LAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHYYL 420
Query: 454 RQRLIRREAFSEDAWKKVYYLSNGNGAEMRWLVPLMR 490
RQRLIRREAFSEDAWKKVYYLSNGNGAEMRWLVPLMR
Sbjct: 421 RQRLIRREAFSEDAWKKVYYLSNGNGAEMRWLVPLMR 456
BLAST of Cp4.1LG02g11100 vs. NCBI nr
Match:
XP_022998601.1 (uncharacterized protein LOC111493189 [Cucurbita maxima])
HSP 1 Score: 882 bits (2278), Expect = 0.0
Identity = 445/459 (96.95%), Postives = 449/459 (97.82%), Query Frame = 0
Query: 34 MLRSILRAAAAAA--SRHQPYNRNPSPILSFTSNYSAKATKSAVKKAPKKGKSKGDGKAT 93
MLRSILRAAAAAA SRHQPYNRNPSPILSFTSNYSAK TKSAVKK PKKGKSKGDGKAT
Sbjct: 1 MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKAT 60
Query: 94 DDPSASAAASDDLDAALFDDKSRSRRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 153
DDPSASAAASDD DAALFDDKSR+RRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA
Sbjct: 61 DDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120
Query: 154 GTYFKFNMEGLNEALPEGLPLGMVKEFEDSMRSALLVRQNFLDLRDNFRRVVDPSLLSPA 213
GTYFKFNMEGLNE LPEGLPLGMVKEFEDSMRSA+LVRQNFLDLRDNFRRVVDPSLLSPA
Sbjct: 121 GTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA 180
Query: 214 GSNIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFYKNAETGLW 273
GS IRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFF+KNAETGLW
Sbjct: 181 GSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW 240
Query: 274 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVRMKKGADSMMMPEGSTLYDL 333
DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGV MKKGADSMMMPEGSTLYDL
Sbjct: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDL 300
Query: 334 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 393
IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA
Sbjct: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360
Query: 394 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 453
RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY
Sbjct: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420
Query: 454 YLRQRLIRREAFSEDAWKKVYYLSNGNGAEMRWLVPLMR 490
YLRQRLIRRE FSEDAWKKVYYLSNGNGAE+RWLVP MR
Sbjct: 421 YLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR 459
BLAST of Cp4.1LG02g11100 vs. ExPASy TrEMBL
Match:
A0A6J1GBS0 (uncharacterized protein LOC111452726 OS=Cucurbita moschata OX=3662 GN=LOC111452726 PE=3 SV=1)
HSP 1 Score: 899 bits (2323), Expect = 0.0
Identity = 451/457 (98.69%), Postives = 455/457 (99.56%), Query Frame = 0
Query: 34 MLRSILRAAAAAASRHQPYNRNPSPILSFTSNYSAKATKSAVKKAPKKGKSKGDGKATDD 93
MLRSILRAAAAA SRHQPYNRNPSPILSFTSNYSAK TKSAVKKAPKKGKSKGDGKATDD
Sbjct: 1 MLRSILRAAAAATSRHQPYNRNPSPILSFTSNYSAKTTKSAVKKAPKKGKSKGDGKATDD 60
Query: 94 PSASAAASDDLDAALFDDKSRSRRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDAGT 153
PSASAAASDDLDAALFDDKSR+RRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDAG+
Sbjct: 61 PSASAAASDDLDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDAGS 120
Query: 154 YFKFNMEGLNEALPEGLPLGMVKEFEDSMRSALLVRQNFLDLRDNFRRVVDPSLLSPAGS 213
YFKFNMEGLNEALPEGLPLGMVKEFEDSMRSA+LVRQNFLDLRDNFRRVVDPSLLSPAGS
Sbjct: 121 YFKFNMEGLNEALPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPAGS 180
Query: 214 NIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFYKNAETGLWDT 273
NIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFF+KNAETGLWDT
Sbjct: 181 NIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLWDT 240
Query: 274 PVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVRMKKGADSMMMPEGSTLYDLID 333
PVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVRMKKGADSMMMPEGSTLYDLID
Sbjct: 241 PVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVRMKKGADSMMMPEGSTLYDLID 300
Query: 334 TGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHARE 393
TGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHARE
Sbjct: 301 TGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHARE 360
Query: 394 LAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHYYL 453
LAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHYYL
Sbjct: 361 LAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHYYL 420
Query: 454 RQRLIRREAFSEDAWKKVYYLSNGNGAEMRWLVPLMR 490
RQRLIRREAFSEDAWKKVYYLSNGNGAEMRWLVPLMR
Sbjct: 421 RQRLIRREAFSEDAWKKVYYLSNGNGAEMRWLVPLMR 457
BLAST of Cp4.1LG02g11100 vs. ExPASy TrEMBL
Match:
A0A6J1KAL1 (uncharacterized protein LOC111493189 OS=Cucurbita maxima OX=3661 GN=LOC111493189 PE=3 SV=1)
HSP 1 Score: 882 bits (2278), Expect = 0.0
Identity = 445/459 (96.95%), Postives = 449/459 (97.82%), Query Frame = 0
Query: 34 MLRSILRAAAAAA--SRHQPYNRNPSPILSFTSNYSAKATKSAVKKAPKKGKSKGDGKAT 93
MLRSILRAAAAAA SRHQPYNRNPSPILSFTSNYSAK TKSAVKK PKKGKSKGDGKAT
Sbjct: 1 MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKAT 60
Query: 94 DDPSASAAASDDLDAALFDDKSRSRRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 153
DDPSASAAASDD DAALFDDKSR+RRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA
Sbjct: 61 DDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120
Query: 154 GTYFKFNMEGLNEALPEGLPLGMVKEFEDSMRSALLVRQNFLDLRDNFRRVVDPSLLSPA 213
GTYFKFNMEGLNE LPEGLPLGMVKEFEDSMRSA+LVRQNFLDLRDNFRRVVDPSLLSPA
Sbjct: 121 GTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA 180
Query: 214 GSNIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFYKNAETGLW 273
GS IRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFF+KNAETGLW
Sbjct: 181 GSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW 240
Query: 274 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVRMKKGADSMMMPEGSTLYDL 333
DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGV MKKGADSMMMPEGSTLYDL
Sbjct: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDL 300
Query: 334 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 393
IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA
Sbjct: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360
Query: 394 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 453
RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY
Sbjct: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420
Query: 454 YLRQRLIRREAFSEDAWKKVYYLSNGNGAEMRWLVPLMR 490
YLRQRLIRRE FSEDAWKKVYYLSNGNGAE+RWLVP MR
Sbjct: 421 YLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR 459
BLAST of Cp4.1LG02g11100 vs. ExPASy TrEMBL
Match:
A0A5A7UZA8 (28S ribosomal protein S29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00370 PE=3 SV=1)
HSP 1 Score: 804 bits (2077), Expect = 1.16e-291
Identity = 409/457 (89.50%), Postives = 429/457 (93.87%), Query Frame = 0
Query: 34 MLRSILRAAAAAASRHQPYNRNPSPILSFTSNYSAKATKSAVKKAPKKGKSKGDGKATDD 93
MLRSILRA AAA S+H NRNPSPILSFTSNYSAK TK VKK KKGKS+ D KA DD
Sbjct: 1 MLRSILRATAAA-SKHHFCNRNPSPILSFTSNYSAKTTKPPVKKG-KKGKSEADAKAGDD 60
Query: 94 PSASAAASDDLDAALFDDKSRSRRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDAGT 153
PSASAA SD+LDAAL DDK+R+RRLAAEEND SLDVGPNGRPLFTSASSLSQLTRKDAGT
Sbjct: 61 PSASAA-SDNLDAALSDDKTRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGT 120
Query: 154 YFKFNMEGLNEALPEGLPLGMVKEFEDSMRSALLVRQNFLDLRDNFRRVVDPSLLSPAGS 213
YFKFNMEGLNE LPEGLP+GMVKEFE+S+RSA+LVRQ+FLDLRDNFRRVVDPSLLSPAGS
Sbjct: 121 YFKFNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGS 180
Query: 214 NIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFYKNAETGLWDT 273
IRKQIVLDGPVN GKSIALAMLVHWAR+EGWLV YVPSGRRWTHGGFF+KN +TGLWDT
Sbjct: 181 KIRKQIVLDGPVNCGKSIALAMLVHWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDT 240
Query: 274 PVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVRMKKGADSMMMPEGSTLYDLID 333
PVQAEDVLRDFLKYNE RLRQLPCQ+S+PIPLGEGVGV M KGADSM MP+GSTLYDLID
Sbjct: 241 PVQAEDVLRDFLKYNEIRLRQLPCQISEPIPLGEGVGVGMAKGADSMRMPDGSTLYDLID 300
Query: 334 TGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHARE 393
TGIKHTHAAVGVVVRLRKELSLVKDIPVL AIDQYNNWFTFSE+EEPVTVRSTRPIHARE
Sbjct: 301 TGIKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARE 360
Query: 394 LAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHYYL 453
LAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRY+LDEAASVFHYYL
Sbjct: 361 LAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYL 420
Query: 454 RQRLIRREAFSEDAWKKVYYLSNGNGAEMRWLVPLMR 490
RQRLIRREAFSE+ WKK+YYLSNGNGAEMRWL PLMR
Sbjct: 421 RQRLIRREAFSEEGWKKIYYLSNGNGAEMRWLAPLMR 454
BLAST of Cp4.1LG02g11100 vs. ExPASy TrEMBL
Match:
A0A1S3C6G8 (28S ribosomal protein S29, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103497026 PE=3 SV=1)
HSP 1 Score: 804 bits (2077), Expect = 1.16e-291
Identity = 409/457 (89.50%), Postives = 429/457 (93.87%), Query Frame = 0
Query: 34 MLRSILRAAAAAASRHQPYNRNPSPILSFTSNYSAKATKSAVKKAPKKGKSKGDGKATDD 93
MLRSILRA AAA S+H NRNPSPILSFTSNYSAK TK VKK KKGKS+ D KA DD
Sbjct: 1 MLRSILRATAAA-SKHHFCNRNPSPILSFTSNYSAKTTKPPVKKG-KKGKSEADAKAGDD 60
Query: 94 PSASAAASDDLDAALFDDKSRSRRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDAGT 153
PSASAA SD+LDAAL DDK+R+RRLAAEEND SLDVGPNGRPLFTSASSLSQLTRKDAGT
Sbjct: 61 PSASAA-SDNLDAALSDDKTRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGT 120
Query: 154 YFKFNMEGLNEALPEGLPLGMVKEFEDSMRSALLVRQNFLDLRDNFRRVVDPSLLSPAGS 213
YFKFNMEGLNE LPEGLP+GMVKEFE+S+RSA+LVRQ+FLDLRDNFRRVVDPSLLSPAGS
Sbjct: 121 YFKFNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGS 180
Query: 214 NIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFYKNAETGLWDT 273
IRKQIVLDGPVN GKSIALAMLVHWAR+EGWLV YVPSGRRWTHGGFF+KN +TGLWDT
Sbjct: 181 KIRKQIVLDGPVNCGKSIALAMLVHWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDT 240
Query: 274 PVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVRMKKGADSMMMPEGSTLYDLID 333
PVQAEDVLRDFLKYNE RLRQLPCQ+S+PIPLGEGVGV M KGADSM MP+GSTLYDLID
Sbjct: 241 PVQAEDVLRDFLKYNEIRLRQLPCQISEPIPLGEGVGVGMAKGADSMRMPDGSTLYDLID 300
Query: 334 TGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHARE 393
TGIKHTHAAVGVVVRLRKELSLVKDIPVL AIDQYNNWFTFSE+EEPVTVRSTRPIHARE
Sbjct: 301 TGIKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARE 360
Query: 394 LAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHYYL 453
LAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRY+LDEAASVFHYYL
Sbjct: 361 LAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYL 420
Query: 454 RQRLIRREAFSEDAWKKVYYLSNGNGAEMRWLVPLMR 490
RQRLIRREAFSE+ WKK+YYLSNGNGAEMRWL PLMR
Sbjct: 421 RQRLIRREAFSEEGWKKIYYLSNGNGAEMRWLAPLMR 454
BLAST of Cp4.1LG02g11100 vs. ExPASy TrEMBL
Match:
A0A6J1DQ31 (28S ribosomal protein S29, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111022041 PE=3 SV=1)
HSP 1 Score: 801 bits (2069), Expect = 2.00e-290
Identity = 405/457 (88.62%), Postives = 426/457 (93.22%), Query Frame = 0
Query: 34 MLRSILRAAAAAASRHQPYNRNPSPILSFTSNYSAKATKSAVKKAPKKGKSKGDGKATDD 93
MLRS+LRAAAAA S+H NRNPSPILS +SNYSAK KS VKK KKGKS D KA DD
Sbjct: 1 MLRSVLRAAAAA-SKHHLCNRNPSPILSLSSNYSAKTPKSTVKKT-KKGKSNADAKAADD 60
Query: 94 PSASAAASDDLDAALFDDKSRSRRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDAGT 153
PSA+AAASDDLDAAL DDKSR+RRLAAEEND SLDVGPNGRPLFTSASSLSQLTRKD+GT
Sbjct: 61 PSATAAASDDLDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSASSLSQLTRKDSGT 120
Query: 154 YFKFNMEGLNEALPEGLPLGMVKEFEDSMRSALLVRQNFLDLRDNFRRVVDPSLLSPAGS 213
YFKFNMEGLNE LPEGLPLGMVKEFE+SMRSA+LVR++FL+LRDNFRRVVDPSL SP G
Sbjct: 121 YFKFNMEGLNEVLPEGLPLGMVKEFEESMRSAVLVRKSFLELRDNFRRVVDPSLRSPDGL 180
Query: 214 NIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFYKNAETGLWDT 273
IRKQIVLDGPVN GKS ALAMLVHWARDEGWLV YVPSGRRWTHGGFF+KN +TGLWDT
Sbjct: 181 KIRKQIVLDGPVNCGKSTALAMLVHWARDEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDT 240
Query: 274 PVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVRMKKGADSMMMPEGSTLYDLID 333
P+QAEDVLRDFLKYNETRLRQLPCQ+S+PIPLGEGVGV M KGADSM MPEGSTLYDLID
Sbjct: 241 PIQAEDVLRDFLKYNETRLRQLPCQISEPIPLGEGVGVGMMKGADSMTMPEGSTLYDLID 300
Query: 334 TGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHARE 393
TGIKHTHAAVGVV+RLRKELSLVKDIPVL AIDQYNNWFTFSE+EEPVTVRSTR IHARE
Sbjct: 301 TGIKHTHAAVGVVIRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRTIHARE 360
Query: 394 LAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHYYL 453
LAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL ARVNFPRY+LDEAASVFHYYL
Sbjct: 361 LAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHYYL 420
Query: 454 RQRLIRREAFSEDAWKKVYYLSNGNGAEMRWLVPLMR 490
RQRLIRREAF+EDAWKK+YYLSNGNGAEMRWLVPLMR
Sbjct: 421 RQRLIRREAFTEDAWKKIYYLSNGNGAEMRWLVPLMR 455
BLAST of Cp4.1LG02g11100 vs. TAIR 10
Match:
AT1G16870.1 (mitochondrial 28S ribosomal protein S29-related )
HSP 1 Score: 562.0 bits (1447), Expect = 4.7e-160
Identity = 282/429 (65.73%), Postives = 333/429 (77.62%), Query Frame = 0
Query: 67 SAKATKSAVKKAPKKGKSKGDGKATDDPSASAAASDDLDAALFDD--KSRSRRLAAEEND 126
S+K+TKS++ K KK + K DP A+ A + AA DD R++RLA +E
Sbjct: 53 SSKSTKSSITKT-KKSEGKKSKPKGGDPGAAGAEEGEFGAAGGDDLEAGRAKRLADDEKI 112
Query: 127 HSLDVGPNGRPLFT-SASSLSQLTRKDAGTYFKFNMEGLNEALPEGLPLGMVKEFEDSMR 186
SLDVGPNGRPLFT ++LSQLT KD G+YFKF+ L LPEGL G+ EF +S R
Sbjct: 113 PSLDVGPNGRPLFTPKDTTLSQLTHKDIGSYFKFDEAALKAVLPEGLASGIEDEFNESWR 172
Query: 187 SALLVRQNFLDLRDNFRRVVDPSL--LSPAGSNIRKQIVLDGPVNSGKSIALAMLVHWAR 246
ALLVR+++L LRDNFRR+ DP + G ++KQIVLDGPV GKSIALAMLVHWAR
Sbjct: 173 PALLVRKSYLALRDNFRRIADPPMWPSDSKGVKLQKQIVLDGPVKCGKSIALAMLVHWAR 232
Query: 247 DEGWLVFYVPSGRRWTHGGFFYKNAETGLWDTPVQAEDVLRDFLKYNETRLRQLPCQLSD 306
DEGWLV Y P GR WTHGG+FYKN TG WDTP+QAE++L+DF+K+NE+RLR+L C++ D
Sbjct: 233 DEGWLVLYAPKGRDWTHGGYFYKNPHTGFWDTPLQAENILKDFVKFNESRLRELRCKIHD 292
Query: 307 PIPLGEGVGVRMKKGADSMMMPEGSTLYDLIDTGIKHTHAAVGVVVRLRKELSLVKDIPV 366
PI LGEG GV KGAD+M +PE STLYDL+ GIK THAAV VVVRLRKELS+VKD+PV
Sbjct: 293 PIVLGEGAGVGYLKGADAMPIPEDSTLYDLVQMGIKSTHAAVNVVVRLRKELSVVKDVPV 352
Query: 367 LFAIDQYNNWFTFSEFEEPVTVRSTRPIHARELAMVKAFRSMMHDDMMVGAFSHSTAVGK 426
L IDQYN+WFTFSEFEEPVT RS RPIHAREL V AFRSMMH+DMMVGAFSHSTAVGK
Sbjct: 353 LIVIDQYNSWFTFSEFEEPVTPRSCRPIHARELTTVNAFRSMMHEDMMVGAFSHSTAVGK 412
Query: 427 LRQDLPDVPLGARVNFPRYNLDEAASVFHYYLRQRLIRREAFSEDAWKKVYYLSNGNGAE 486
LR+DLPDVP+ AR FPRY+LDEA +V +YYLRQRL+RRE F+E+ WKK+YYL+NGNGAE
Sbjct: 413 LRKDLPDVPVDARQQFPRYSLDEAEAVCYYYLRQRLVRREVFNEENWKKIYYLANGNGAE 472
Query: 487 MRWLVPLMR 491
MRWL P MR
Sbjct: 473 MRWLAPFMR 480
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_023525695.1 | 0.0 | 100.00 | uncharacterized protein LOC111789228 [Cucurbita pepo subsp. pepo] | [more] |
XP_022949341.1 | 0.0 | 98.69 | uncharacterized protein LOC111452726 [Cucurbita moschata] | [more] |
KAG6607352.1 | 0.0 | 98.91 | 28S ribosomal protein S29, mitochondrial, partial [Cucurbita argyrosperma subsp.... | [more] |
KAG7037027.1 | 0.0 | 98.69 | 28S ribosomal protein S29, mitochondrial [Cucurbita argyrosperma subsp. argyrosp... | [more] |
XP_022998601.1 | 0.0 | 96.95 | uncharacterized protein LOC111493189 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GBS0 | 0.0 | 98.69 | uncharacterized protein LOC111452726 OS=Cucurbita moschata OX=3662 GN=LOC1114527... | [more] |
A0A6J1KAL1 | 0.0 | 96.95 | uncharacterized protein LOC111493189 OS=Cucurbita maxima OX=3661 GN=LOC111493189... | [more] |
A0A5A7UZA8 | 1.16e-291 | 89.50 | 28S ribosomal protein S29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... | [more] |
A0A1S3C6G8 | 1.16e-291 | 89.50 | 28S ribosomal protein S29, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103497026... | [more] |
A0A6J1DQ31 | 2.00e-290 | 88.62 | 28S ribosomal protein S29, mitochondrial OS=Momordica charantia OX=3673 GN=LOC11... | [more] |
Match Name | E-value | Identity | Description | |
AT1G16870.1 | 4.7e-160 | 65.73 | mitochondrial 28S ribosomal protein S29-related | [more] |