Cp4.1LG02g10960 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g10960
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	far upstream element-binding protein 2-like
Location	Cp4.1LG02: 9069038 .. 9077565 (+)
RNA-Seq Expression	Cp4.1LG02g10960
Synteny	Cp4.1LG02g10960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAGATCATATCCTTTTTTTTCTTTCTCTCACTATCCTCTCATCTGAACCCTAGCATCGATCTCCCTCACCACCGAGGGCTTTTCGACACTACTTCAATACGTCTTTCCTGCTCACCACCATGGCGGAGGAAGTCGTTGTAGCTACCGGAGCGGCGAGTCCCGAGCCCTTGGATCACAAACGCAAGCTTGCAGATTTGGACAATGAAGCCACTGAAGCCCCCGAGGAGAACCATGGCGAGCCCAATGAGGAGTCTCCTGCTTCTGACGACGCTGACGTTGCAGTTTCTGACGAATCGGAGGCCAAGCGGCCTCGTCTCGACGGAAAGCCGGAGGAGAATGGTATCTTCTTTCTTCTTTGTATGTTGCAGCTTTCTATGTGATTTAGGCCTTTTTTTTTAAAACCATGGAATTATCGGATGTATATTTGTGGACTTTCTCCGTCTCTCTTCGTTACTTCTTCTAATACTTGTTAGCTGCTGCCGGAAAATGCTGCGTGATTTTCCTAGTGCATAATTTTTTTCCCCTCAAACCATACCCCTGGAAGTCGAGAAGCGTAAGGAATTCTATTTTCTACTCTGCTTTGGTTATATTTCAAATATCTTCGATCCTCGTGATTTCTGCAAGGAAATCGAACTTTATTCTTCAAGGTTTAGAACTGAATAATACTTTCCTTCCCAACGCCTCATGAAATGGCTACTGGTGCTGCATCTATCAACTGGAATACGCCAGATATCCAGCTAGATATGCCTATTTTCATTTTACTACCTCATTTCAGGCGTGAGATATTTTTAACACACTGAAGTTCTATGGTACTTGAACGTTGTTTCTGTTCTGAGCTTCCTGGGGTTTAGTGAATGCCGTTTTCCCCGTTTTCCATTGGAAGATGGAAGCATTAGTTCAACAAAGAAAGTACCGGCAGGATTCCTAGGTTCAAGGAGAACGTTCTGACATGTGCCCAACAAGTATTTGATACATATTGAATGTCTTTAACAATTTTTTAGTAATTTCCAACTAGTGTCCTAGTTTGATGCGTTAATATGTTCTTTAGAAATCATTTCTGGCTGATTATGCTAGATTTATAATTTGAGTTTTGGACATTGGATTATGGTTATGAAGGTTCTTCGGTGAGGTACTGAGGTGGACTTCTTAACATAAGTTCAACTCATTTTTGCTGTGTTCATTTTAATTTACTATTTAACCAATGGATATTCAATCAATGTTTCATGGAAGTAGTATATTATTATTTATTCTTGTTGCAAATTACAATATCTTAGTATTTTGCTTTCTTCTACAGCTAGTGAGAATGGGCATAAAAAAAAGATGGTGGAGGAACCGGCTAAGGAAGATGATACATCTGAAGAGGACTCAGAACATCCTGCTTCATTGGAGGAGGTTTCTGAAAGAGAGGAAACTGACAAACCCACTGCAGAGCCTAATGAAGCAGGTGATGCTCTGGATTCTGCGGAGGAAACAGAACAACCTGCTTCATTGGAGGAGGTTCATGAAAAAGAGGAAACTGAACAGCCCACTGCAGAGCCTCATGAAGCAGGTGGCGCTCAGGATTCTGCTGCAGAAATCTCTCAGGAGGACAAAACTCAAGAACTCTCCAAGGAGGAAAATCAACCTCCGGTAGTTGAGGCTGCATTGCCCCTGCAGCAGGAGGATGGTTCTAATTCTGAGCATGGTCAACCATCATCAGTGGCCGAAACAACAACATACAGGATGGAAGTTCCTAATAGTAAGGTGTGAACTTGCGAGATATTAAATTTGATCATAGGATAGATATTGAAGGTTGATGTTAATTTCCACCTTCAACCTCAAGTTACTGATATTAAATTCTTTTTTAGGGTTAAATTACAATTTTTTCATGAGCTTTTGGAGTGGTATCTGAAAAGTTCCAAATGTTTGACTGTGGCTGTTAGAATCCTTAATTGCAGAAGTGTCTAATAAGCTAATGAATTTTCAATTTTGTCCAACAGGTTGCTGGTATATAAAATGTTTTTTTGAAGTTTAAGGACCATCAGACACAAAATAAATTGTTTATAGATGTTATAGTAAGTTATTAAGGATTAGGGACCTATATACTTGGAAGACCAAACTTATAATTTAACCTATTCTTTTGATGAAAGCTATGCTGCAAGTGTAGTGGCTAGGTGGCTAGAATACAGAAGATGAGCTTGTAAGAAAACATGGCCTGGATGTTGAAAAATTTACTTCTGATCCATCATCAAGTTTTTTCTGATAATTAGGATTTAGTTAATAGTTGACCTATTTACTGCAGGTTGGTGTTCTCATTGGCAAGGCTGGAGATACTATTAGATACTTGCAGTACAATTCTGGTGCTAAAATCCAAATCATGAGGGATTCAGATGCTGATCCAAATCGTTTAAGTAGACCTGTAGAAATAGTTGGAACTTCGGAAAGTATAAAAAAGGCAGAGGAGTTAATTAATGCCGTGATTGCAGAGGTATTTACTCTCTTTATTATTAGTTTTTATTTATATGCCATTATGCTTGTATTTTTTCCACTTCTCCTGATTTTTTTCTGTGACTAGTATTTTTCATTTAATTGTTGTTTTAGCATCTGTTGGAGGTTTGTTGTCCTGATATTGAATTATTGAGTAAATTTTATTTTGTCATAGGCTGATGCTGGTGGATCTCCATCACTCATAGCCAGGGGCCTTACTTCATCACATTCTATGGCAACTGCCGAACAGATTCAGATACAAGTCCCAAATGAGAAGGTTGGAATCCTAATTTATGTGGATTGCTTATCAACTGGTTCTCTCAATAGCTTACCTGATTTTCTTTACCTAGGTTGGTTTAATTATAGGAAGAGGTGGGGAGACTATCAAAAGTCTTCAGACCAGATCTGGTGCACGTATACAGGTAGTTGATATGTTGCAAACCTATCTATCTTTATGGTACATGCTAATTAATTTTTATGGTTTAATATAACCATCGTGCCTGACTTAGATCTGATTTTGATGTAGTTGATACCCCAAAATCTTCCAGAAGGAGATGAATCTAAGGAAAGGACTATTAGAGTTACTGGTGATAAGAAGCAGATTGAAATTGCTACAGACATGATAAAAGAAGTTATGAATCAGGTATGCTTTTAACACATCACCTTTCCTCCAGACATTTTGGTCCTTATATCCCTAAATCCTTACTTGGAATTATGACTTTGATTTTCTGTATCATAAAAATGCTTTTAGCATGTTCATATCATCTAAATTTGGCCTGTGCTTACTTTTATTAATTTTTGGATTTGAATTATTAGTATGTTCTTTCTGTACCATACATAAGTTCATTCCATGAATATGGTTCATTCTTGGTGATATATCTATGTATATGTTCATTTCTGTAATTTTTTTTTTATTATTTTCAGCAGTTTTGCTATTATTGGTACCTAATCTTGCTTACCAGTCTTGTCTGAGACTAGAGATTAAGGTTCTGAAGTAACAGCGTTAAGATTATCATACAGATTAATCTGCTCAGTGTCAGAGAAGCAAAATATTAGCATCTATATGCTATATTATATAGTTCTAGGTGTGGAAGGTGTGTTGTATTTTTGTCCACTTGATGTCATTGATGGAACAGTGCTAGATTCTTTTCAATCATGCTGGTTGAGTATATAAATTTGGCCGGGTTTAACAATCACTGCTATGGGAAACAGTATGCAGATTTTGTATGATTATCTTTAATGGGATTGGGGAAATCACTTGACTGGTGGTCCTAATAGCTTGTGAAATCAATGAATGGTCTATGCAAAGATCACATGAATGTTCTAGGAAAGATCTTATACTGAAATCCAAGATGCCGGTTGCCATAATTTATCTATCATAAAGGTGTCAAACTCGAATTGGTTGGCTTTAAAACTGCAGATTACAATATTGCCTTTTCCATGGGGTCGACATTGCTTTCTTGGTGTAGCAATAGCCAACTACTTTTCACTCCCATCCACTGAAGAGAGGTATCAGGCATTAAATCTCGCGATTGCAGGATGTTAATAGTTGGTAAGATTGCTTCAAGATTTCAAACTAAGAATAATTGAGTAAGAATGTATTGCATTAACCTTAGTGCTCATTAGTGGACCCATGTTCTATGCTTGAGATTGTGTTGGAAGAAAGTAATGCCTGGTTGAAGTCATGATGCTTTCATTTGCATGGGACCAATAGTATTCAAAGCTGATACCATTGACTGAGGCATCATAGGCATGGAAATTTGGCTCATGCCACCTTAACTGCACTATAGCAACATAATCGCTTTAAACTAACGGCAATCAATATCAATGTAATTATTTGTTGATATTTTCCTTTTTTCCTGTGGATGATCTGTCTGACAGTGAAATGCTCAGCATGTGTTGGTCACTACTTCAGAATGAAAGAGATAAGATTTAGTTGTGAAGTTGATGTCGGTATATCTGGCATCTGTTTAGAAGAATCACTATCTATTTGATGAAACAGAACAATGCATGTGTGAGATGCCAGAGTTCAAATGTTAATCTCTCTCAGACCATGATTTTGTCATCACTAGACTTTTTCTGCGCTTTTCATCCTTTTCCTAAAAAGCTTTTCAAGTTTGTTAATGTTTTTATGATTTGAGGGCATGTTTTGTTGGTTGTAATTTGACTACTTCACTACACTACCTTCGAATTATTTGGGCAGTTGTAATTGGCGGTTCTTTTCTTTTTAACTTAGAAGCCATGCTAACCTGGGTGCTCCCTGTTCTGATATTTATGAATGCTTTTGGATATCTTACATCCCTGTTGAAGTACTTGTTCCCTTGCATGCAATGGTTTAGAGCGATATAATACATCTGGTATTTTATTGGTTTGATCTTCAATGATATGATCTATCTGGTATTTTCTTTGTTATAAAGCCTTTTACCTTACTTTTATTTCTTCTGAACATCAGAATGGTAATGTTTTTGATTCATCTTGCTTATTTTCTGGAACTAATATGTACCAGGGGCTCACCCAATGTTCTTGAACAAGAGATTTGGATCACCAAGTTCACGCTGCTCATTTACTTTATTCCTTTTACTAGCTTATAATCAAACTGTTGATTAATAATTTCCACGGTTTACTTACTCATCTTTTTGTTTGTCCTTGGAGTAGACTGTGAGGCCTTCACCACACTCCACTGGTTTTAACCAACAGGCTTACCGGCCCCGTGGTCCTGGTGGTAATCAATGGGGTCAACGGGGTCCCCATCCTTCACATCCTGCAGCATATGATTATCCACACAGAGGACCTTATCCATCTCATAATACCCAGTATCAGCATCCTGCATTTGGAAACTATCCTCAACAAATGGGTGGTCCTCGGAGCAGCTATAGCTCTGGTTGGGAGCAAAGGCCACCCCCCAGTATGCAGGGGCCACCGCCCAGTTCGGGTGGTTATGACTACTATGGTGGAAGAAGCCATTATTCAGATGCTCCACCTTCTCATTTCCCTGGTGCTATGCCTGCACATGCTCCTGGCCCTTCTCCTGCTCCAGCTCTCGGTCCACCACAAACTCAGTCCAGTTACAACTATAGTCAGCAGCAAAACCAAGGTTATGGGCATGCTGCTCCCTATTCTCAGNATAAAATTGGAAAAAAAAAGAAAAAAAAAAAAGAAGAAGAAGAAGAAGACAAGCATTAGTTACAATACAAAATGATACATACAGCCAATAAAAAGTATATAACTTGTTCTTACAACAAGAAAATGCTTTGTGCAGCATATTTCCTTGAAAAAAAGTTACATATTTCTTTCTTAAACCATTTAATTATTAGAGTGATTTGAATTGAGTAATTAGGCTGACCTCTTGCAAATGAAATCATAAGCAACCTCCACAACACTCCTGGGTTTAGCTTCCTCGGAAGGCAACTTCAAGAGAGATGCAACTTTCAAGAAAGCAGCATGTTGTGTGGCAAATAAGCATGATTCTTCACTCTCAGAAAGCTCTTTTCTTGGAACTTTGTGCTTCTTCAAAAGGGTAGGCTTCGAAATCGCCCACTGCATTGCCCAAATCGCCAATGGCCTCATGTACCCCAAAGATCTATACTTATCATCTATGTCCCATGCTTCTGGGGTTTGAAATGAATACCTGAACAGGATTTCAGAACAAACAGATATCAAATTTCCTATAAGTTCAAGAAAAGTAGCTTAAAAACCAGTGGAATTCCATAATATAAAGAACAAAATGTGGTACCCGAGGCCATCTTGACCCCAAGCAGCTTGATGAATGCCCATTGCAGTCTGGAAGCCTGTTTCCACCATTCCTTCTTGAATCATTGAGGCAGCAACAGAGTATGTAACTCCAGCCCAAATCTCCTTTGGCTGCAATATGGATCTATCAACCCTTCCATCTGGAAACATCCCGTTTACTGCCCCGCGAGTTCCTCCCTTCACCTTCATCACATTGAAATTGAATATCTTTTCAAGTGTACTCCTTATCTTCTCTTCATCAACAATGGGACAAAGCCCACATGCTCTAGCATACCTGTGTTTTCAGAACGTGAAAGATTGTTGGTGGGGAGTTCTACGTCCGCTAATTAAGGAGGTAATCATAGATTTATAAGTAAAGAATATATCTCCGTTGGTATAAGGCCTTTTGAAAAAACCAAAAGTAAAGCCACGAGAGCTTATGCTCGAAGTGAACAATATCATACCATTGTGGAGAATCGTAAGATTCCTAACAAAACACAATCAAGTTACTACTCAATCCAACCCTAAGATACATTGTTAAGCTCCTACTCAATCCATCCTCTTAACAGAGACAGCTCCAAAATCACGCAAATTCAGCCAGGCCACAAGAGATAAAGAAATGTAAAAGCAAGAAAAGTAGAAGGGGATCAATAAAAGCTTGTTCACTCACCATTTTCCTGCCAGTTGATCAGCTTGAATGGACGAGCTCCAAGGACCACCACTATTGTCATAGTTGAAGTAAGAGCCATTCCATAACGTATCATAAACACCTCTTGCCTTCTGATACTTGATCCAAAAGTAGTGAGCAGCTGCTTCATCATCAACCTNTTTGGAAACTATCCTCAACAAATGGGTGGTCCTCGGAGCAGCTATAGCTCTGGTTGGGAGCAAAGGCCACCCCCCAGTATGCAGGGGCCACCGCCCAGTTCGGGTGGTTATGACTACTATGGTGGAAGAAGCCATTATTCAGATGCTCCACCTTCTCATTTCCCTGGTGCTATGCCTGCACATGCTCCTGGCCCTTCTCCTGCTCCAGCTCTCGGTCCACCACAAACTCAGTCCAGTTACAACTATAGTCAGCAGCAAAACCAAGGTTATGGGCATGCTGCTCCCTATTCTCAGGCTGCTCCTCATCAGAGCTATGGCCATGGATATGAACAGAAATATGATCATCATGCTCCATCGCAGAATCCATACGGTGGGCATGGGAATGCTCAGCAACTTTACCCTCAGGCTGGGGCTCAACAGGTTTACCCTGGACAACAACAGTATGATAAGCCTCCATCATATGGTGCTCCAGCGCAGGGACCTCCTCCCCAGTCTTATGGCGCTCCTAGGGTTGGTCAGCCTGGAGAGCCTTATCAAGGTGGGTCAGCACCTGCTACATATGGGCAAAATGTGCAACCTCAACAGACGTATCAATACCCAACTGGTGGTTCTACTCAGCAGTATCCTACCCCCTATGGCATACAAAACACAGATGGTTACAACCAGGCACCTGCTGCTGCCGCTGCCGCTGCTGCCAATTACCACCCGCAGCAGGGCAGCCAGGCAGGTTATGGTCAACCTGGTGTACAGCAACTGTCTGCCTATGGCCAGCAAGTAGCTCCTGCTGCCGCATATGAGCAGTATCCGACCACGCAACAGGGTTATCCCGAGCAGGCTGCTGCAAATACTGCTGGATATGCTGCATACCAAGCACCTCAAGATCCCGCTGCATATAGCAGTGCCCAAGCAACTGCTGCAGCAGTTTATTCTGCGCCAGCCAGTGGGCAGCCCACTTATCCTCAACAGACTGCAGCTCAGCCAAGCTATGATCAGTCAGTTCCACAATCAGGCGGGTATGGAACTGTGCCTTCAAGTGCTCCCGTAGGTTACGGGAAGAGTGTGTCGCCACAGCCACAGCCTCAGCCGCAGCCTGGGTATCCACAGTATGATTCTACTCAAGTTTATGGGGCAAGTCGTTGAATTTTTGATAAATTAGGGTTAGGATCGTTGGTTGTGTAAGCAGAGTAAGGAAGAGAGGAGAGGAGAGGAGAGGGTGTTATTAATGTGTTGAACTTGTTCAATCTGCTGTGTAGGGGATTGACTGTTGTATTTGCATTGCCTGCCTTCATATCGACCAAGTTATTAAAAGCATTCGGTTTATATATGTTATGATGTACGAGCTTGTTCATTAATTCATAAAGTAGAATTCTCATCACCCTTGTGTGTTGAAGTTGTGCGTTTAAAAAATGCCAATTTTACGTTTCAAATTCAGGGTGAAGATTGAAACCAAGGTGGTGTTGGCTAAAGAAACAGGCATGGAAATTTTTAACCATAACACCAAATA

mRNA sequence

TCAGATCATATCCTTTTTTTTCTTTCTCTCACTATCCTCTCATCTGAACCCTAGCATCGATCTCCCTCACCACCGAGGGCTTTTCGACACTACTTCAATACGTCTTTCCTGCTCACCACCATGGCGGAGGAAGTCGTTGTAGCTACCGGAGCGGCGAGTCCCGAGCCCTTGGATCACAAACGCAAGCTTGCAGATTTGGACAATGAAGCCACTGAAGCCCCCGAGGAGAACCATGGCGAGCCCAATGAGGAGTCTCCTGCTTCTGACGACGCTGACGTTGCAGTTTCTGACGAATCGGAGGCCAAGCGGCCTCGTCTCGACGGAAAGCCGGAGGAGAATGCTAGTGAGAATGGGCATAAAAAAAAGATGGTGGAGGAACCGGCTAAGGAAGATGATACATCTGAAGAGGACTCAGAACATCCTGCTTCATTGGAGGAGGTTTCTGAAAGAGAGGAAACTGACAAACCCACTGCAGAGCCTAATGAAGCAGGTGATGCTCTGGATTCTGCGGAGGAAACAGAACAACCTGCTTCATTGGAGGAGGTTCATGAAAAAGAGGAAACTGAACAGCCCACTGCAGAGCCTCATGAAGCAGGTGGCGCTCAGGATTCTGCTGCAGAAATCTCTCAGGAGGACAAAACTCAAGAACTCTCCAAGGAGGAAAATCAACCTCCGGTAGTTGAGGCTGCATTGCCCCTGCAGCAGGAGGATGGTTCTAATTCTGAGCATGGTCAACCATCATCAGTGGCCGAAACAACAACATACAGGATGGAAGTTCCTAATAGTAAGGTTGGTGTTCTCATTGGCAAGGCTGGAGATACTATTAGATACTTGCAGTACAATTCTGGTGCTAAAATCCAAATCATGAGGGATTCAGATGCTGATCCAAATCGTTTAAGTAGACCTGTAGAAATAGTTGGAACTTCGGAAAGTATAAAAAAGGCAGAGGAGTTAATTAATGCCGTGATTGCAGAGGCTGATGCTGGTGGATCTCCATCACTCATAGCCAGGGGCCTTACTTCATCACATTCTATGGCAACTGCCGAACAGATTCAGATACAAGTCCCAAATGAGAAGGTTGGTTTAATTATAGGAAGAGGTGGGGAGACTATCAAAAGTCTTCAGACCAGATCTGGTGCACGTATACAGTTGATACCCCAAAATCTTCCAGAAGGAGATGAATCTAAGGAAAGGACTATTAGAGTTACTGGTGATAAGAAGCAGATTGAAATTGCTACAGACATGATAAAAGAAGTTATGAATCAGACTGTGAGGCCTTCACCACACTCCACTGGTTTTAACCAACAGGCTTACCGGCCCCGTGGTCCTGGTGGTAATCAATGGGGTCAACGGGGTCCCCATCCTTCACATCCTGCAGCATATGATTATCCACACAGAGGACCTTATCCATCTCATAATACCCAGTATCAGCATCCTGCATTTGGAAACTATCCTCAACAAATGGGTGGTCCTCGGAGCAGCTATAGCTCTGGTTGGGAGCAAAGGCCACCCCCCAGTATGCAGGGGCCACCGCCCAGTTCGGGTGGTTATGACTACTATGGTGGAAGAAGCCATTATTCAGATGCTCCACCTTCTCATTTCCCTGGTGCTATGCCTGCACATGCTCCTGGCCCTTCTCCTGCTCCAGCTCTCGGTCCACCACAAACTCAGTCCAGTTACAACTATAGTCAGCAGCAAAACCAAGGTTATGGGCATGCTGCTCCCTATTCTCAGNATAAAATTGGAAAAAAAAAGAAAAAAAAAAAAGAAGAAGAAGAAGAAGACAAGCATTAGTTACAATACAAAATGATACATACAGCCAATAAAAAGTATATAACTTGTTCTTACAACAAGAAAATGCTTTGTGCAGCATATTTCCTTGAAAAAAAGTTACATATTTCTTTCTTAAACCATTTAATTATTAGAGTGATTTGAATTGAGTAATTAGGCTGACCTCTTGCAAATGAAATCATAAGCAACCTCCACAACACTCCTGGGTTTAGCTTCCTCGGAAGGCAACTTCAAGAGAGATGCAACTTTCAAGAAAGCAGCATGTTGTGTGGCAAATAAGCATGATTCTTCACTCTCAGAAAGCTCTTTTCTTGGAACTTTGTGCTTCTTCAAAAGGGTAGGCTTCGAAATCGCCCACTGCATTGCCCAAATCGCCAATGGCCTCATGTACCCCAAAGATCTATACTTATCATCTATGTCCCATGCTTCTGGGGTTTGAAATGAATACCTGAACAGGATTTCAGAACAAACAGATATCAAATTTCCTATAAGTTCAAGAAAAGTAGCTTAAAAACCAGTGGAATTCCATAATATAAAGAACAAAATGTGGTACCCGAGGCCATCTTGACCCCAAGCAGCTTGATGAATGCCCATTGCAGTCTGGAAGCCTGTTTCCACCATTCCTTCTTGAATCATTGAGGCAGCAACAGAGTATGTAACTCCAGCCCAAATCTCCTTTGGCTGCAATATGGATCTATCAACCCTTCCATCTGGAAACATCCCGTTTACTGCCCCGCGAGTTCCTCCCTTCACCTTCATCACATTGAAATTGAATATCTTTTCAAGTGTACTCCTTATCTTCTCTTCATCAACAATGGGACAAAGCCCACATGCTCTAGCATACCTGTGTTTTCAGAACGTGAAAGATTGTTGGTGGGGAGTTCTACGTCCGCTAATTAAGGAGGTAATCATAGATTTATAAGTAAAGAATATATCTCCGTTGGTATAAGGCCTTTTGAAAAAACCAAAAGTAAAGCCACGAGAGCTTATGCTCGAAGTGAACAATATCATACCATTGTGGAGAATCGTAAGATTCCTAACAAAACACAATCAAGTTACTACTCAATCCAACCCTAAGATACATTGTTAAGCTCCTACTCAATCCATCCTCTTAACAGAGACAGCTCCAAAATCACGCAAATTCAGCCAGGCCACAAGAGATAAAGAAATGTAAAAGCAAGAAAAGTAGAAGGGGATCAATAAAAGCTTGTTCACTCACCATTTTCCTGCCAGTTGATCAGCTTGAATGGACGAGCTCCAAGGACCACCACTATTGTCATAGTTGAAGTAAGAGCCATTCCATAACGTATCATAAACACCTCTTGCCTTCTGATACTTGATCCAAAAGTAGTGAGCAGCTGCTTCATCATCAACCTNTTTGGAAACTATCCTCAACAAATGGGTGGTCCTCGGAGCAGCTATAGCTCTGGTTGGGAGCAAAGGCCACCCCCCAGTATGCAGGGGCCACCGCCCAGTTCGGGTGGTTATGACTACTATGGTGGAAGAAGCCATTATTCAGATGCTCCACCTTCTCATTTCCCTGGTGCTATGCCTGCACATGCTCCTGGCCCTTCTCCTGCTCCAGCTCTCGGTCCACCACAAACTCAGTCCAGTTACAACTATAGTCAGCAGCAAAACCAAGGTTATGGGCATGCTGCTCCCTATTCTCAGGCTGCTCCTCATCAGAGCTATGGCCATGGATATGAACAGAAATATGATCATCATGCTCCATCGCAGAATCCATACGGTGGGCATGGGAATGCTCAGCAACTTTACCCTCAGGCTGGGGCTCAACAGGTTTACCCTGGACAACAACAGTATGATAAGCCTCCATCATATGGTGCTCCAGCGCAGGGACCTCCTCCCCAGTCTTATGGCGCTCCTAGGGTTGGTCAGCCTGGAGAGCCTTATCAAGGTGGGTCAGCACCTGCTACATATGGGCAAAATGTGCAACCTCAACAGACGTATCAATACCCAACTGGTGGTTCTACTCAGCAGTATCCTACCCCCTATGGCATACAAAACACAGATGGTTACAACCAGGCACCTGCTGCTGCCGCTGCCGCTGCTGCCAATTACCACCCGCAGCAGGGCAGCCAGGCAGGTTATGGTCAACCTGGTGTACAGCAACTGTCTGCCTATGGCCAGCAAGTAGCTCCTGCTGCCGCATATGAGCAGTATCCGACCACGCAACAGGGTTATCCCGAGCAGGCTGCTGCAAATACTGCTGGATATGCTGCATACCAAGCACCTCAAGATCCCGCTGCATATAGCAGTGCCCAAGCAACTGCTGCAGCAGTTTATTCTGCGCCAGCCAGTGGGCAGCCCACTTATCCTCAACAGACTGCAGCTCAGCCAAGCTATGATCAGTCAGTTCCACAATCAGGCGGGTATGGAACTGTGCCTTCAAGTGCTCCCGTAGGTTACGGGAAGAGTGTGTCGCCACAGCCACAGCCTCAGCCGCAGCCTGGGTATCCACAGTATGATTCTACTCAAGTTTATGGGGCAAGTCGTTGAATTTTTGATAAATTAGGGTTAGGATCGTTGGTTGTGTAAGCAGAGTAAGGAAGAGAGGAGAGGAGAGGAGAGGGTGTTATTAATGTGTTGAACTTGTTCAATCTGCTGTGTAGGGGATTGACTGTTGTATTTGCATTGCCTGCCTTCATATCGACCAAGTTATTAAAAGCATTCGGTTTATATATGTTATGATGTACGAGCTTGTTCATTAATTCATAAAGTAGAATTCTCATCACCCTTGTGTGTTGAAGTTGTGCGTTTAAAAAATGCCAATTTTACGTTTCAAATTCAGGGTGAAGATTGAAACCAAGGTGGTGTTGGCTAAAGAAACAGGCATGGAAATTTTTAACCATAACACCAAATA

Coding sequence (CDS)

ATGGCGGAGGAAGTCGTTGTAGCTACCGGAGCGGCGAGTCCCGAGCCCTTGGATCACAAACGCAAGCTTGCAGATTTGGACAATGAAGCCACTGAAGCCCCCGAGGAGAACCATGGCGAGCCCAATGAGGAGTCTCCTGCTTCTGACGACGCTGACGTTGCAGTTTCTGACGAATCGGAGGCCAAGCGGCCTCGTCTCGACGGAAAGCCGGAGGAGAATGCTAGTGAGAATGGGCATAAAAAAAAGATGGTGGAGGAACCGGCTAAGGAAGATGATACATCTGAAGAGGACTCAGAACATCCTGCTTCATTGGAGGAGGTTTCTGAAAGAGAGGAAACTGACAAACCCACTGCAGAGCCTAATGAAGCAGGTGATGCTCTGGATTCTGCGGAGGAAACAGAACAACCTGCTTCATTGGAGGAGGTTCATGAAAAAGAGGAAACTGAACAGCCCACTGCAGAGCCTCATGAAGCAGGTGGCGCTCAGGATTCTGCTGCAGAAATCTCTCAGGAGGACAAAACTCAAGAACTCTCCAAGGAGGAAAATCAACCTCCGGTAGTTGAGGCTGCATTGCCCCTGCAGCAGGAGGATGGTTCTAATTCTGAGCATGGTCAACCATCATCAGTGGCCGAAACAACAACATACAGGATGGAAGTTCCTAATAGTAAGGTTGGTGTTCTCATTGGCAAGGCTGGAGATACTATTAGATACTTGCAGTACAATTCTGGTGCTAAAATCCAAATCATGAGGGATTCAGATGCTGATCCAAATCGTTTAAGTAGACCTGTAGAAATAGTTGGAACTTCGGAAAGTATAAAAAAGGCAGAGGAGTTAATTAATGCCGTGATTGCAGAGGCTGATGCTGGTGGATCTCCATCACTCATAGCCAGGGGCCTTACTTCATCACATTCTATGGCAACTGCCGAACAGATTCAGATACAAGTCCCAAATGAGAAGGTTGGTTTAATTATAGGAAGAGGTGGGGAGACTATCAAAAGTCTTCAGACCAGATCTGGTGCACGTATACAGTTGATACCCCAAAATCTTCCAGAAGGAGATGAATCTAAGGAAAGGACTATTAGAGTTACTGGTGATAAGAAGCAGATTGAAATTGCTACAGACATGATAAAAGAAGTTATGAATCAGACTGTGAGGCCTTCACCACACTCCACTGGTTTTAACCAACAGGCTTACCGGCCCCGTGGTCCTGGTGGTAATCAATGGGGTCAACGGGGTCCCCATCCTTCACATCCTGCAGCATATGATTATCCACACAGAGGACCTTATCCATCTCATAATACCCAGTATCAGCATCCTGCATTTGGAAACTATCCTCAACAAATGGGTGGTCCTCGGAGCAGCTATAGCTCTGGTTGGGAGCAAAGGCCACCCCCCAGTATGCAGGGGCCACCGCCCAGTTCGGGTGGTTATGACTACTATGGTGGAAGAAGCCATTATTCAGATGCTCCACCTTCTCATTTCCCTGGTGCTATGCCTGCACATGCTCCTGGCCCTTCTCCTGCTCCAGCTCTCGGTCCACCACAAACTCAGTCCAGTTACAACTATAGTCAGCAGCAAAACCAAGGTTATGGGCATGCTGCTCCCTATTCTCAGNATAAAATTGGAAAAAAAAAGAAAAAAAAAAAAGAAGAAGAAGAAGAAGACAAGCATTAG

Protein sequence

MAEEVVVATGAASPEPLDHKRKLADLDNEATEAPEENHGEPNEESPASDDADVAVSDESEAKRPRLDGKPEENASENGHKKKMVEEPAKEDDTSEEDSEHPASLEEVSEREETDKPTAEPNEAGDALDSAEETEQPASLEEVHEKEETEQPTAEPHEAGGAQDSAAEISQEDKTQELSKEENQPPVVEAALPLQQEDGSNSEHGQPSSVAETTTYRMEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDSDADPNRLSRPVEIVGTSESIKKAEELINAVIAEADAGGSPSLIARGLTSSHSMATAEQIQIQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERTIRVTGDKKQIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGGNQWGQRGPHPSHPAAYDYPHRGPYPSHNTQYQHPAFGNYPQQMGGPRSSYSSGWEQRPPPSMQGPPPSSGGYDYYGGRSHYSDAPPSHFPGAMPAHAPGPSPAPALGPPQTQSSYNYSQQQNQGYGHAAPYSQXKIGKKKKKKKEEEEEDKH

Homology

[Close]

BLAST of Cp4.1LG02g10960 vs. ExPASy Swiss-Prot
Match: Q3U0V1 (Far upstream element-binding protein 2 OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV=2)

HSP 1 Score: 92.4 bits (228), Expect = 1.7e-17
Identity = 60/191 (31.41%), Postives = 102/191 (53.40%), Query Frame = 0


Query: 195 QEDGSNSEHG---QPSSVAETTTYRMEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRD 254
           Q D   S+ G    P   + T  YR  VP+  VG++IG+ G+ I  +Q +SG K+QI  D
Sbjct: 127 QGDSIGSQLGPIHPPPRTSMTEEYR--VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPD 186

Query: 255 SDADPNRLSRPVEIVGTSESIKKAEELINAVIAEADAGGSPSLIARGLTSSHSMATAEQI 314
           S   P    R V + G  ES++KA+ +++ +++    GG P           +    E  
Sbjct: 187 SGGLP---ERSVSLTGAPESVQKAKMMLDDIVSRG-RGGPPGQFHDNANGGQNGTVQE-- 246

Query: 315 QIQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERTIRVTGDKKQIEI 374
            I +P  K GL+IG+GGETIK LQ R+G ++ LI       + + ++ +R+ GD  +++ 
Sbjct: 247 -IMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDG--SQNTNVDKPLRIIGDPYKVQQ 306

Query: 375 ATDMIKEVMNQ 383
           A +M+ +++ +
Sbjct: 307 ACEMVMDILRE 306

[Close]

BLAST of Cp4.1LG02g10960 vs. ExPASy Swiss-Prot
Match: Q99PF5 (Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.7e-17
Identity = 60/191 (31.41%), Postives = 102/191 (53.40%), Query Frame = 0


Query: 195 QEDGSNSEHG---QPSSVAETTTYRMEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRD 254
           Q D   S+ G    P   + T  YR  VP+  VG++IG+ G+ I  +Q +SG K+QI  D
Sbjct: 127 QGDSIGSQLGPIHPPPRTSMTEEYR--VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPD 186

Query: 255 SDADPNRLSRPVEIVGTSESIKKAEELINAVIAEADAGGSPSLIARGLTSSHSMATAEQI 314
           S   P    R V + G  ES++KA+ +++ +++    GG P           +    E  
Sbjct: 187 SGGLP---ERSVSLTGAPESVQKAKMMLDDIVSRG-RGGPPGQFHDNANGGQNGTVQE-- 246

Query: 315 QIQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERTIRVTGDKKQIEI 374
            I +P  K GL+IG+GGETIK LQ R+G ++ LI       + + ++ +R+ GD  +++ 
Sbjct: 247 -IMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDG--SQNTNVDKPLRIIGDPYKVQQ 306

Query: 375 ATDMIKEVMNQ 383
           A +M+ +++ +
Sbjct: 307 ACEMVMDILRE 306

[Close]

BLAST of Cp4.1LG02g10960 vs. ExPASy Swiss-Prot
Match: Q96AE4 (Far upstream element-binding protein 1 OS=Homo sapiens OX=9606 GN=FUBP1 PE=1 SV=3)

HSP 1 Score: 91.7 bits (226), Expect = 2.9e-17
Identity = 68/208 (32.69%), Postives = 109/208 (52.40%), Query Frame = 0


Query: 175 QELSKEENQPPVVEAALPLQQEDGSN--SEHGQPSSVAETTTYRMEVPNSKVGVLIGKAG 234
           Q+   E+   P  +   P     G+     H Q S    T  Y+  VP+  VG +IG+ G
Sbjct: 63  QKRPLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQSRSVMTEEYK--VPDGMVGFIIGRGG 122

Query: 235 DTIRYLQYNSGAKIQIMRDSDADPNRLSRPVEIVGTSESIKKAEELINAVIAEADAGGSP 294
           + I  +Q  SG KIQI  DS   P    R   + GT ES++ A+ L++ ++ +    G P
Sbjct: 123 EQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPESVQSAKRLLDQIVEK----GRP 182

Query: 295 SLIARGLTSSHSMATAEQIQIQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEG 354
              A G         A Q +I +P  K GL+IG+GGETIK LQ R+G ++ +I Q+ P+ 
Sbjct: 183 ---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGETIKQLQERAGVKMVMI-QDGPQ- 242

Query: 355 DESKERTIRVTGDKKQIEIATDMIKEVM 381
           +   ++ +R+TGD  +++ A +M+ E++
Sbjct: 243 NTGADKPLRITGDPYKVQQAKEMVLELI 255

[Close]

BLAST of Cp4.1LG02g10960 vs. ExPASy Swiss-Prot
Match: Q96I24 (Far upstream element-binding protein 3 OS=Homo sapiens OX=9606 GN=FUBP3 PE=1 SV=2)

HSP 1 Score: 91.3 bits (225), Expect = 3.8e-17
Identity = 72/236 (30.51%), Postives = 120/236 (50.85%), Query Frame = 0


Query: 157 EAGGAQDSAAEISQ-EDKTQELSKEENQPPVVEAAL--------PLQQEDGSNSEHGQPS 216
           +A G  D+   + Q   K   +    N  P+V+ ++        PL  +DG  ++ G   
Sbjct: 15  KAEGFVDALHRVRQIAAKIDSIPHLNNSTPLVDPSVYGYGVQKRPL--DDGVGNQLGALV 74

Query: 217 SVAETTTYRMEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDSDADPNRLSRPVEIVG 276
                 T   +VP+  VG +IG+ G+ I  +Q  SG KIQI  +S   P    RP  + G
Sbjct: 75  HQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP---ERPCVLTG 134

Query: 277 TSESIKKAEELINAVIAEADAGGSPSLIARGLTSSHSMATAEQIQIQVPNEKVGLIIGRG 336
           T ESI++A+ L+  ++     G         + S+ ++      +I +P  KVGL+IGRG
Sbjct: 135 TPESIEQAKRLLGQIVDRCRNGPG---FHNDIDSNSTIQ-----EILIPASKVGLVIGRG 194

Query: 337 GETIKSLQTRSGARIQLIPQN-LPEGDESKERTIRVTGDKKQIEIATDMIKEVMNQ 383
           GETIK LQ R+G ++ +I    LP G    ++ +R+TGD  +++ A +M+ E++ +
Sbjct: 195 GETIKQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDAFKVQQAREMVLEIIRE 234

[Close]

BLAST of Cp4.1LG02g10960 vs. ExPASy Swiss-Prot
Match: Q92945 (Far upstream element-binding protein 2 OS=Homo sapiens OX=9606 GN=KHSRP PE=1 SV=4)

HSP 1 Score: 90.1 bits (222), Expect = 8.4e-17
Identity = 64/211 (30.33%), Postives = 110/211 (52.13%), Query Frame = 0


Query: 175 QELSKEENQPPVVEAALPLQQEDGSNSEHG---QPSSVAETTTYRMEVPNSKVGVLIGKA 234
           Q+   E+   P  E+     Q D  +S+ G    P   + T  YR  VP+  VG++IG+ 
Sbjct: 108 QKRQLEDGDQP--ESKKLASQGDSISSQLGPIHPPPRTSMTEEYR--VPDGMVGLIIGRG 167

Query: 235 GDTIRYLQYNSGAKIQIMRDSDADPNRLSRPVEIVGTSESIKKAEELINAVIAEADAGGS 294
           G+ I  +Q +SG K+QI  DS   P    R V + G  ES++KA+ +++ +++    GG 
Sbjct: 168 GEQINKIQQDSGCKVQISPDSGGLP---ERSVSLTGAPESVQKAKMMLDDIVSRG-RGGP 227

Query: 295 PSLIARGLTSSHSMATAEQIQIQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPE 354
           P           +    E   I +P  K GL+IG+GGETIK LQ R+G ++ LI      
Sbjct: 228 PGQFHDNANGGQNGTVQE---IMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDG--S 287

Query: 355 GDESKERTIRVTGDKKQIEIATDMIKEVMNQ 383
            + + ++ +R+ GD  +++ A +M+ +++ +
Sbjct: 288 QNTNVDKPLRIIGDPYKVQQACEMVMDILRE 305

[Close]

BLAST of Cp4.1LG02g10960 vs. NCBI nr
Match: XP_023524727.1 (far upstream element-binding protein 2-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023524728.1 far upstream element-binding protein 2-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1032 bits (2669), Expect = 0.0
Identity = 538/538 (100.00%), Postives = 538/538 (100.00%), Query Frame = 0


Query: 1   MAEEVVVATGAASPEPLDHKRKLADLDNEATEAPEENHGEPNEESPASDDADVAVSDESE 60
           MAEEVVVATGAASPEPLDHKRKLADLDNEATEAPEENHGEPNEESPASDDADVAVSDESE
Sbjct: 1   MAEEVVVATGAASPEPLDHKRKLADLDNEATEAPEENHGEPNEESPASDDADVAVSDESE 60

Query: 61  AKRPRLDGKPEENASENGHKKKMVEEPAKEDDTSEEDSEHPASLEEVSEREETDKPTAEP 120
           AKRPRLDGKPEENASENGHKKKMVEEPAKEDDTSEEDSEHPASLEEVSEREETDKPTAEP
Sbjct: 61  AKRPRLDGKPEENASENGHKKKMVEEPAKEDDTSEEDSEHPASLEEVSEREETDKPTAEP 120

Query: 121 NEAGDALDSAEETEQPASLEEVHEKEETEQPTAEPHEAGGAQDSAAEISQEDKTQELSKE 180
           NEAGDALDSAEETEQPASLEEVHEKEETEQPTAEPHEAGGAQDSAAEISQEDKTQELSKE
Sbjct: 121 NEAGDALDSAEETEQPASLEEVHEKEETEQPTAEPHEAGGAQDSAAEISQEDKTQELSKE 180

Query: 181 ENQPPVVEAALPLQQEDGSNSEHGQPSSVAETTTYRMEVPNSKVGVLIGKAGDTIRYLQY 240
           ENQPPVVEAALPLQQEDGSNSEHGQPSSVAETTTYRMEVPNSKVGVLIGKAGDTIRYLQY
Sbjct: 181 ENQPPVVEAALPLQQEDGSNSEHGQPSSVAETTTYRMEVPNSKVGVLIGKAGDTIRYLQY 240

Query: 241 NSGAKIQIMRDSDADPNRLSRPVEIVGTSESIKKAEELINAVIAEADAGGSPSLIARGLT 300
           NSGAKIQIMRDSDADPNRLSRPVEIVGTSESIKKAEELINAVIAEADAGGSPSLIARGLT
Sbjct: 241 NSGAKIQIMRDSDADPNRLSRPVEIVGTSESIKKAEELINAVIAEADAGGSPSLIARGLT 300

Query: 301 SSHSMATAEQIQIQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERTI 360
           SSHSMATAEQIQIQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERTI
Sbjct: 301 SSHSMATAEQIQIQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERTI 360

Query: 361 RVTGDKKQIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGGNQWGQRGPHPSHPAA 420
           RVTGDKKQIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGGNQWGQRGPHPSHPAA
Sbjct: 361 RVTGDKKQIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGGNQWGQRGPHPSHPAA 420

Query: 421 YDYPHRGPYPSHNTQYQHPAFGNYPQQMGGPRSSYSSGWEQRPPPSMQGPPPSSGGYDYY 480
           YDYPHRGPYPSHNTQYQHPAFGNYPQQMGGPRSSYSSGWEQRPPPSMQGPPPSSGGYDYY
Sbjct: 421 YDYPHRGPYPSHNTQYQHPAFGNYPQQMGGPRSSYSSGWEQRPPPSMQGPPPSSGGYDYY 480

Query: 481 GGRSHYSDAPPSHFPGAMPAHAPGPSPAPALGPPQTQSSYNYSQQQNQGYGHAAPYSQ 538
           GGRSHYSDAPPSHFPGAMPAHAPGPSPAPALGPPQTQSSYNYSQQQNQGYGHAAPYSQ
Sbjct: 481 GGRSHYSDAPPSHFPGAMPAHAPGPSPAPALGPPQTQSSYNYSQQQNQGYGHAAPYSQ 538

[Close]

BLAST of Cp4.1LG02g10960 vs. NCBI nr
Match: KAG6607520.1 (Far upstream element-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1023 bits (2645), Expect = 0.0
Identity = 533/538 (99.07%), Postives = 537/538 (99.81%), Query Frame = 0


Query: 1   MAEEVVVATGAASPEPLDHKRKLADLDNEATEAPEENHGEPNEESPASDDADVAVSDESE 60
           MAEEVVVATGAASPEPLDHKRKLADLDNEATEAP+ENHGEPNEESPASD+ADVAVSDESE
Sbjct: 1   MAEEVVVATGAASPEPLDHKRKLADLDNEATEAPQENHGEPNEESPASDNADVAVSDESE 60

Query: 61  AKRPRLDGKPEENASENGHKKKMVEEPAKEDDTSEEDSEHPASLEEVSEREETDKPTAEP 120
           AKRPRLDGKPEENASENGHKK+MVEEPAKEDDTSEEDSEHPASLEEVSEREET+KPTAEP
Sbjct: 61  AKRPRLDGKPEENASENGHKKRMVEEPAKEDDTSEEDSEHPASLEEVSEREETEKPTAEP 120

Query: 121 NEAGDALDSAEETEQPASLEEVHEKEETEQPTAEPHEAGGAQDSAAEISQEDKTQELSKE 180
           NEAGDALDSAEETEQPASLEEVHEKEETEQPTAEPHEAGGAQDSAAEISQE KTQELSKE
Sbjct: 121 NEAGDALDSAEETEQPASLEEVHEKEETEQPTAEPHEAGGAQDSAAEISQEVKTQELSKE 180

Query: 181 ENQPPVVEAALPLQQEDGSNSEHGQPSSVAETTTYRMEVPNSKVGVLIGKAGDTIRYLQY 240
           ENQPPVVEAALPLQQEDGSNSEHGQPSSVAETTTYRMEVPNSKVGVLIGKAGDTIRYLQY
Sbjct: 181 ENQPPVVEAALPLQQEDGSNSEHGQPSSVAETTTYRMEVPNSKVGVLIGKAGDTIRYLQY 240

Query: 241 NSGAKIQIMRDSDADPNRLSRPVEIVGTSESIKKAEELINAVIAEADAGGSPSLIARGLT 300
           NSGAKIQIMRDSDADPNRLSRPVEIVGTSESIKKAEELINAVIAEADAGGSPSLIARGLT
Sbjct: 241 NSGAKIQIMRDSDADPNRLSRPVEIVGTSESIKKAEELINAVIAEADAGGSPSLIARGLT 300

Query: 301 SSHSMATAEQIQIQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERTI 360
           SSHSMATAEQIQIQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERTI
Sbjct: 301 SSHSMATAEQIQIQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERTI 360

Query: 361 RVTGDKKQIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGGNQWGQRGPHPSHPAA 420
           RVTGDKKQIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGGNQWGQRGPHPSHPAA
Sbjct: 361 RVTGDKKQIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGGNQWGQRGPHPSHPAA 420

Query: 421 YDYPHRGPYPSHNTQYQHPAFGNYPQQMGGPRSSYSSGWEQRPPPSMQGPPPSSGGYDYY 480
           YDYPHRGPYPSHNTQYQHPAFGNYPQQMGGPRSSYSSGWEQRPPPSMQGPPPSSGGYDYY
Sbjct: 421 YDYPHRGPYPSHNTQYQHPAFGNYPQQMGGPRSSYSSGWEQRPPPSMQGPPPSSGGYDYY 480

Query: 481 GGRSHYSDAPPSHFPGAMPAHAPGPSPAPALGPPQTQSSYNYSQQQNQGYGHAAPYSQ 538
           GGRSHYSDAPPSHFPGAMPAHAPGPSPAPALGPPQTQSSYNYSQQQNQGYGHAAPYSQ
Sbjct: 481 GGRSHYSDAPPSHFPGAMPAHAPGPSPAPALGPPQTQSSYNYSQQQNQGYGHAAPYSQ 538

[Close]

BLAST of Cp4.1LG02g10960 vs. NCBI nr
Match: XP_022948485.1 (far upstream element-binding protein 2-like [Cucurbita moschata])

HSP 1 Score: 1021 bits (2641), Expect = 0.0
Identity = 532/538 (98.88%), Postives = 536/538 (99.63%), Query Frame = 0


Query: 1   MAEEVVVATGAASPEPLDHKRKLADLDNEATEAPEENHGEPNEESPASDDADVAVSDESE 60
           MAEEVVVATGAASPEPLDHKRKLADLDNEATE P+ENHGEPNEESPASD+ADVAVSDESE
Sbjct: 1   MAEEVVVATGAASPEPLDHKRKLADLDNEATETPQENHGEPNEESPASDNADVAVSDESE 60

Query: 61  AKRPRLDGKPEENASENGHKKKMVEEPAKEDDTSEEDSEHPASLEEVSEREETDKPTAEP 120
           AKRPRLDGKPEENASENGHKKKMVEEPAKEDDTSEEDSEHPASLE+VSEREET+KPTAEP
Sbjct: 61  AKRPRLDGKPEENASENGHKKKMVEEPAKEDDTSEEDSEHPASLEDVSEREETEKPTAEP 120

Query: 121 NEAGDALDSAEETEQPASLEEVHEKEETEQPTAEPHEAGGAQDSAAEISQEDKTQELSKE 180
           NEAGDALDSAEETEQPASLEEVHEKEETEQPTAEPHEAGGAQDSAAEISQE KTQELSKE
Sbjct: 121 NEAGDALDSAEETEQPASLEEVHEKEETEQPTAEPHEAGGAQDSAAEISQEVKTQELSKE 180

Query: 181 ENQPPVVEAALPLQQEDGSNSEHGQPSSVAETTTYRMEVPNSKVGVLIGKAGDTIRYLQY 240
           ENQPPVVEAALPLQQEDGSNSEHGQPSSVAETTTYRMEVPNSKVGVLIGKAGDTIRYLQY
Sbjct: 181 ENQPPVVEAALPLQQEDGSNSEHGQPSSVAETTTYRMEVPNSKVGVLIGKAGDTIRYLQY 240

Query: 241 NSGAKIQIMRDSDADPNRLSRPVEIVGTSESIKKAEELINAVIAEADAGGSPSLIARGLT 300
           NSGAKIQIMRDSDADPNRLSRPVEIVGTSESIKKAEELINAVIAEADAGGSPSLIARGLT
Sbjct: 241 NSGAKIQIMRDSDADPNRLSRPVEIVGTSESIKKAEELINAVIAEADAGGSPSLIARGLT 300

Query: 301 SSHSMATAEQIQIQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERTI 360
           SSHSMATAEQIQIQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERTI
Sbjct: 301 SSHSMATAEQIQIQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERTI 360

Query: 361 RVTGDKKQIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGGNQWGQRGPHPSHPAA 420
           RVTGDKKQIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGGNQWGQRGPHPSHPAA
Sbjct: 361 RVTGDKKQIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGGNQWGQRGPHPSHPAA 420

Query: 421 YDYPHRGPYPSHNTQYQHPAFGNYPQQMGGPRSSYSSGWEQRPPPSMQGPPPSSGGYDYY 480
           YDYPHRGPYPSHNTQYQHPAFGNYPQQMGGPRSSYSSGWEQRPPPSMQGPPPSSGGYDYY
Sbjct: 421 YDYPHRGPYPSHNTQYQHPAFGNYPQQMGGPRSSYSSGWEQRPPPSMQGPPPSSGGYDYY 480

Query: 481 GGRSHYSDAPPSHFPGAMPAHAPGPSPAPALGPPQTQSSYNYSQQQNQGYGHAAPYSQ 538
           GGRSHYSDAPPSHFPGAMPAHAPGPSPAPALGPPQTQSSYNYSQQQNQGYGHAAPYSQ
Sbjct: 481 GGRSHYSDAPPSHFPGAMPAHAPGPSPAPALGPPQTQSSYNYSQQQNQGYGHAAPYSQ 538

[Close]

BLAST of Cp4.1LG02g10960 vs. NCBI nr
Match: XP_022973378.1 (far upstream element-binding protein 1-like [Cucurbita maxima])

HSP 1 Score: 1013 bits (2618), Expect = 0.0
Identity = 529/538 (98.33%), Postives = 533/538 (99.07%), Query Frame = 0


Query: 1   MAEEVVVATGAASPEPLDHKRKLADLDNEATEAPEENHGEPNEESPASDDADVAVSDESE 60
           MAEEVVVATGAASPEPLDHKRKLADLDNEATEAPEENHGEPNEESPASDDADVAVSDESE
Sbjct: 1   MAEEVVVATGAASPEPLDHKRKLADLDNEATEAPEENHGEPNEESPASDDADVAVSDESE 60

Query: 61  AKRPRLDGKPEENASENGHKKKMVEEPAKEDDTSEEDSEHPASLEEVSEREETDKPTAEP 120
           AKRPRLDGKPEENASENGH+KKMVEEPAKEDDTSEEDSEHPASLEEVSEREET+KPTAEP
Sbjct: 61  AKRPRLDGKPEENASENGHQKKMVEEPAKEDDTSEEDSEHPASLEEVSEREETEKPTAEP 120

Query: 121 NEAGDALDSAEETEQPASLEEVHEKEETEQPTAEPHEAGGAQDSAAEISQEDKTQELSKE 180
           NEAGDALDSAEETEQPASLEEVH+KEE EQPTAEPHEAGG QDSAAEISQEDKTQELSKE
Sbjct: 121 NEAGDALDSAEETEQPASLEEVHKKEEIEQPTAEPHEAGGPQDSAAEISQEDKTQELSKE 180

Query: 181 ENQPPVVEAALPLQQEDGSNSEHGQPSSVAETTTYRMEVPNSKVGVLIGKAGDTIRYLQY 240
           ENQPPVVEAALPLQQEDGSNSEH Q SSVAETT YRMEVPNSKVGVLIGKAGDTIRYLQY
Sbjct: 181 ENQPPVVEAALPLQQEDGSNSEHVQLSSVAETTAYRMEVPNSKVGVLIGKAGDTIRYLQY 240

Query: 241 NSGAKIQIMRDSDADPNRLSRPVEIVGTSESIKKAEELINAVIAEADAGGSPSLIARGLT 300
           NSGAKIQIMRDSDADPNRLSRPVEIVG+SESIKKAEELINAVIAEADAGGSPSLIARGLT
Sbjct: 241 NSGAKIQIMRDSDADPNRLSRPVEIVGSSESIKKAEELINAVIAEADAGGSPSLIARGLT 300

Query: 301 SSHSMATAEQIQIQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERTI 360
           SSHSMATAEQIQIQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERTI
Sbjct: 301 SSHSMATAEQIQIQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERTI 360

Query: 361 RVTGDKKQIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGGNQWGQRGPHPSHPAA 420
           RVTGDKKQIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGGNQWGQRGPHPSHPAA
Sbjct: 361 RVTGDKKQIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGGNQWGQRGPHPSHPAA 420

Query: 421 YDYPHRGPYPSHNTQYQHPAFGNYPQQMGGPRSSYSSGWEQRPPPSMQGPPPSSGGYDYY 480
           YDYPHRGPYPSHNTQYQHPAFGNYPQQMGGPRSSYSSGWEQRPPPSMQGPPPSSGGYDYY
Sbjct: 421 YDYPHRGPYPSHNTQYQHPAFGNYPQQMGGPRSSYSSGWEQRPPPSMQGPPPSSGGYDYY 480

Query: 481 GGRSHYSDAPPSHFPGAMPAHAPGPSPAPALGPPQTQSSYNYSQQQNQGYGHAAPYSQ 538
           GGRSHYSDAPPSHFPGAMPAHAPGPSPAPALGPPQTQSSYNYSQQQNQGYGHAAPYSQ
Sbjct: 481 GGRSHYSDAPPSHFPGAMPAHAPGPSPAPALGPPQTQSSYNYSQQQNQGYGHAAPYSQ 538

[Close]

BLAST of Cp4.1LG02g10960 vs. NCBI nr
Match: XP_038890334.1 (far upstream element-binding protein 2 [Benincasa hispida])

HSP 1 Score: 826 bits (2133), Expect = 1.31e-293
Identity = 442/540 (81.85%), Postives = 467/540 (86.48%), Query Frame = 0


Query: 1   MAEEVVVATGAASPEPLDHKRKLADLDNEATEAPEENHGEPNEESPASDDADVAVSDESE 60
           MAEEVVVATGAASPEPLDHKRKLADLDNE TEAPEENH EPNEES A D  DVA SDESE
Sbjct: 1   MAEEVVVATGAASPEPLDHKRKLADLDNERTEAPEENHAEPNEESAAPDTTDVATSDESE 60

Query: 61  AKRPRLDGKPEENASENGHKKKMVEEPAKEDDTSEEDSEHPASLEEVSEREETDKPTAEP 120
           AKRPRLDGK EENASENGH++   EE   ++D  +                         
Sbjct: 61  AKRPRLDGKLEENASENGHQENKQEELVDKEDNKQ------------------------- 120

Query: 121 NEAGDALDSAEETEQPASLEEVHEKEETEQPTAEPHEAGGAQDSAAEISQEDKTQELSKE 180
                    + E EQPAS+EEV EKEETEQ  AEPHEAG AQDSA EISQEDK++EL KE
Sbjct: 121 ---------SSEEEQPASVEEVPEKEETEQLAAEPHEAGDAQDSAVEISQEDKSEELYKE 180

Query: 181 ENQPPVVEAALPLQQEDGSNSEHGQPSSVAETTTYRMEVPNSKVGVLIGKAGDTIRYLQY 240
           E+QP  V+A LP+Q+ED SN+E  QP S AETTTY+MEVPNSKVGVLIGKAGDTIRYLQY
Sbjct: 181 ESQPAEVKAELPVQEEDVSNAEQDQPPSEAETTTYKMEVPNSKVGVLIGKAGDTIRYLQY 240

Query: 241 NSGAKIQIMRDSDADPNRLSRPVEIVGTSESIKKAEELINAVIAEADAGGSPSLIARGLT 300
           NSGAKIQIMRD++ADPNRL+RPVEI+GTSE+IKKAEELINAVIAEADAGGSPSLIARGLT
Sbjct: 241 NSGAKIQIMRDAEADPNRLTRPVEIIGTSENIKKAEELINAVIAEADAGGSPSLIARGLT 300

Query: 301 SSHSMATAEQIQIQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERTI 360
           SSHS+ATAEQIQ+QVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERTI
Sbjct: 301 SSHSIATAEQIQLQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERTI 360

Query: 361 RVTGDKKQIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGG-NQWGQRGPHPSHPA 420
           R+TGDKKQIEIATDMIKEVMNQTVRPS HSTGFNQQAYRPRGPGG  QWGQRGPHPSHPA
Sbjct: 361 RITGDKKQIEIATDMIKEVMNQTVRPSSHSTGFNQQAYRPRGPGGPTQWGQRGPHPSHPA 420

Query: 421 AYDYPHRGPYPSHNTQYQH-PAFGNYPQQMGGPRSSYSSGWEQRPPPSMQGPPPSSGGYD 480
           AYDYPHRGPYPSHNTQYQH P FGNYPQQMGGPRSSYSSGWEQRPPPSMQGPPPSSGGYD
Sbjct: 421 AYDYPHRGPYPSHNTQYQHHPGFGNYPQQMGGPRSSYSSGWEQRPPPSMQGPPPSSGGYD 480

Query: 481 YYGGRSHYSDAPPSHFPGAMPAHAPGPSPAPALGPPQTQSSYNYSQQQNQGYGHAAPYSQ 538
           YYG RSHYSDAPPSHFPGAMPAHAPGPSPAPALGPPQ+QS YNYSQQQ+QGYGHAAPYSQ
Sbjct: 481 YYGQRSHYSDAPPSHFPGAMPAHAPGPSPAPALGPPQSQSGYNYSQQQSQGYGHAAPYSQ 506

[Close]

BLAST of Cp4.1LG02g10960 vs. ExPASy TrEMBL
Match: A0A6J1G9Z3 (far upstream element-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111452148 PE=4 SV=1)

HSP 1 Score: 1021 bits (2641), Expect = 0.0
Identity = 532/538 (98.88%), Postives = 536/538 (99.63%), Query Frame = 0


Query: 1   MAEEVVVATGAASPEPLDHKRKLADLDNEATEAPEENHGEPNEESPASDDADVAVSDESE 60
           MAEEVVVATGAASPEPLDHKRKLADLDNEATE P+ENHGEPNEESPASD+ADVAVSDESE
Sbjct: 1   MAEEVVVATGAASPEPLDHKRKLADLDNEATETPQENHGEPNEESPASDNADVAVSDESE 60

Query: 61  AKRPRLDGKPEENASENGHKKKMVEEPAKEDDTSEEDSEHPASLEEVSEREETDKPTAEP 120
           AKRPRLDGKPEENASENGHKKKMVEEPAKEDDTSEEDSEHPASLE+VSEREET+KPTAEP
Sbjct: 61  AKRPRLDGKPEENASENGHKKKMVEEPAKEDDTSEEDSEHPASLEDVSEREETEKPTAEP 120

Query: 121 NEAGDALDSAEETEQPASLEEVHEKEETEQPTAEPHEAGGAQDSAAEISQEDKTQELSKE 180
           NEAGDALDSAEETEQPASLEEVHEKEETEQPTAEPHEAGGAQDSAAEISQE KTQELSKE
Sbjct: 121 NEAGDALDSAEETEQPASLEEVHEKEETEQPTAEPHEAGGAQDSAAEISQEVKTQELSKE 180

Query: 181 ENQPPVVEAALPLQQEDGSNSEHGQPSSVAETTTYRMEVPNSKVGVLIGKAGDTIRYLQY 240
           ENQPPVVEAALPLQQEDGSNSEHGQPSSVAETTTYRMEVPNSKVGVLIGKAGDTIRYLQY
Sbjct: 181 ENQPPVVEAALPLQQEDGSNSEHGQPSSVAETTTYRMEVPNSKVGVLIGKAGDTIRYLQY 240

Query: 241 NSGAKIQIMRDSDADPNRLSRPVEIVGTSESIKKAEELINAVIAEADAGGSPSLIARGLT 300
           NSGAKIQIMRDSDADPNRLSRPVEIVGTSESIKKAEELINAVIAEADAGGSPSLIARGLT
Sbjct: 241 NSGAKIQIMRDSDADPNRLSRPVEIVGTSESIKKAEELINAVIAEADAGGSPSLIARGLT 300

Query: 301 SSHSMATAEQIQIQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERTI 360
           SSHSMATAEQIQIQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERTI
Sbjct: 301 SSHSMATAEQIQIQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERTI 360

Query: 361 RVTGDKKQIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGGNQWGQRGPHPSHPAA 420
           RVTGDKKQIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGGNQWGQRGPHPSHPAA
Sbjct: 361 RVTGDKKQIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGGNQWGQRGPHPSHPAA 420

Query: 421 YDYPHRGPYPSHNTQYQHPAFGNYPQQMGGPRSSYSSGWEQRPPPSMQGPPPSSGGYDYY 480
           YDYPHRGPYPSHNTQYQHPAFGNYPQQMGGPRSSYSSGWEQRPPPSMQGPPPSSGGYDYY
Sbjct: 421 YDYPHRGPYPSHNTQYQHPAFGNYPQQMGGPRSSYSSGWEQRPPPSMQGPPPSSGGYDYY 480

Query: 481 GGRSHYSDAPPSHFPGAMPAHAPGPSPAPALGPPQTQSSYNYSQQQNQGYGHAAPYSQ 538
           GGRSHYSDAPPSHFPGAMPAHAPGPSPAPALGPPQTQSSYNYSQQQNQGYGHAAPYSQ
Sbjct: 481 GGRSHYSDAPPSHFPGAMPAHAPGPSPAPALGPPQTQSSYNYSQQQNQGYGHAAPYSQ 538

[Close]

BLAST of Cp4.1LG02g10960 vs. ExPASy TrEMBL
Match: A0A6J1ICW3 (far upstream element-binding protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111471936 PE=4 SV=1)

HSP 1 Score: 1013 bits (2618), Expect = 0.0
Identity = 529/538 (98.33%), Postives = 533/538 (99.07%), Query Frame = 0


Query: 1   MAEEVVVATGAASPEPLDHKRKLADLDNEATEAPEENHGEPNEESPASDDADVAVSDESE 60
           MAEEVVVATGAASPEPLDHKRKLADLDNEATEAPEENHGEPNEESPASDDADVAVSDESE
Sbjct: 1   MAEEVVVATGAASPEPLDHKRKLADLDNEATEAPEENHGEPNEESPASDDADVAVSDESE 60

Query: 61  AKRPRLDGKPEENASENGHKKKMVEEPAKEDDTSEEDSEHPASLEEVSEREETDKPTAEP 120
           AKRPRLDGKPEENASENGH+KKMVEEPAKEDDTSEEDSEHPASLEEVSEREET+KPTAEP
Sbjct: 61  AKRPRLDGKPEENASENGHQKKMVEEPAKEDDTSEEDSEHPASLEEVSEREETEKPTAEP 120

Query: 121 NEAGDALDSAEETEQPASLEEVHEKEETEQPTAEPHEAGGAQDSAAEISQEDKTQELSKE 180
           NEAGDALDSAEETEQPASLEEVH+KEE EQPTAEPHEAGG QDSAAEISQEDKTQELSKE
Sbjct: 121 NEAGDALDSAEETEQPASLEEVHKKEEIEQPTAEPHEAGGPQDSAAEISQEDKTQELSKE 180

Query: 181 ENQPPVVEAALPLQQEDGSNSEHGQPSSVAETTTYRMEVPNSKVGVLIGKAGDTIRYLQY 240
           ENQPPVVEAALPLQQEDGSNSEH Q SSVAETT YRMEVPNSKVGVLIGKAGDTIRYLQY
Sbjct: 181 ENQPPVVEAALPLQQEDGSNSEHVQLSSVAETTAYRMEVPNSKVGVLIGKAGDTIRYLQY 240

Query: 241 NSGAKIQIMRDSDADPNRLSRPVEIVGTSESIKKAEELINAVIAEADAGGSPSLIARGLT 300
           NSGAKIQIMRDSDADPNRLSRPVEIVG+SESIKKAEELINAVIAEADAGGSPSLIARGLT
Sbjct: 241 NSGAKIQIMRDSDADPNRLSRPVEIVGSSESIKKAEELINAVIAEADAGGSPSLIARGLT 300

Query: 301 SSHSMATAEQIQIQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERTI 360
           SSHSMATAEQIQIQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERTI
Sbjct: 301 SSHSMATAEQIQIQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERTI 360

Query: 361 RVTGDKKQIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGGNQWGQRGPHPSHPAA 420
           RVTGDKKQIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGGNQWGQRGPHPSHPAA
Sbjct: 361 RVTGDKKQIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGGNQWGQRGPHPSHPAA 420

Query: 421 YDYPHRGPYPSHNTQYQHPAFGNYPQQMGGPRSSYSSGWEQRPPPSMQGPPPSSGGYDYY 480
           YDYPHRGPYPSHNTQYQHPAFGNYPQQMGGPRSSYSSGWEQRPPPSMQGPPPSSGGYDYY
Sbjct: 421 YDYPHRGPYPSHNTQYQHPAFGNYPQQMGGPRSSYSSGWEQRPPPSMQGPPPSSGGYDYY 480

Query: 481 GGRSHYSDAPPSHFPGAMPAHAPGPSPAPALGPPQTQSSYNYSQQQNQGYGHAAPYSQ 538
           GGRSHYSDAPPSHFPGAMPAHAPGPSPAPALGPPQTQSSYNYSQQQNQGYGHAAPYSQ
Sbjct: 481 GGRSHYSDAPPSHFPGAMPAHAPGPSPAPALGPPQTQSSYNYSQQQNQGYGHAAPYSQ 538

[Close]

BLAST of Cp4.1LG02g10960 vs. ExPASy TrEMBL
Match: A0A5D3BKY3 (Far upstream element-binding protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00790 PE=4 SV=1)

HSP 1 Score: 825 bits (2132), Expect = 9.65e-294
Identity = 443/540 (82.04%), Postives = 464/540 (85.93%), Query Frame = 0


Query: 1   MAEEVVVATGAASPEPLDHKRKLADLDNEATEAPEENHGEPNEESPASDDADVAVSDESE 60
           MAEEVVVATGAASPEPLDHKRKLADLDNE TEA EENH EP E S   D ADV +SDESE
Sbjct: 1   MAEEVVVATGAASPEPLDHKRKLADLDNEPTEAAEENHSEPIEGSADPDAADVPISDESE 60

Query: 61  AKRPRLDGKPEENASENGHKKKMVEE-PAKEDDTSEEDSEHPASLEEVSEREETDKPTAE 120
           AKRPRLDGKP+ NASENGH++K  EE  AKED                            
Sbjct: 61  AKRPRLDGKPDGNASENGHEEKKEEELEAKED---------------------------- 120

Query: 121 PNEAGDALDSAEETEQPASLEEVHEKEETEQPTAEPHEAGGAQDSAAEISQEDKTQELSK 180
                     + E EQPAS+E + EKEETEQPT E HEAG AQDSAAEISQEDKTQELSK
Sbjct: 121 -------YKQSSEEEQPASVEVLPEKEETEQPTEESHEAGDAQDSAAEISQEDKTQELSK 180

Query: 181 EENQPPVVEAALPLQQEDGSNSEHGQPSSVAETTTYRMEVPNSKVGVLIGKAGDTIRYLQ 240
           EE+QPP VEAA PLQ+ED SN+E  QPSS +ETTTY+MEVPNSKVGVLIGKAGDTIRYLQ
Sbjct: 181 EESQPPEVEAAPPLQEEDVSNAEQDQPSSESETTTYKMEVPNSKVGVLIGKAGDTIRYLQ 240

Query: 241 YNSGAKIQIMRDSDADPNRLSRPVEIVGTSESIKKAEELINAVIAEADAGGSPSLIARGL 300
           YNSGAKIQIMRD++ADPNRL+RPVEI+GTSE+IKKAEELINAVIAEADAGGSPSLIARGL
Sbjct: 241 YNSGAKIQIMRDAEADPNRLTRPVEIIGTSENIKKAEELINAVIAEADAGGSPSLIARGL 300

Query: 301 TSSHSMATAEQIQIQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERT 360
           TSSHS+ATAEQIQ+QVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERT
Sbjct: 301 TSSHSIATAEQIQLQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERT 360

Query: 361 IRVTGDKKQIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGG-NQWGQRGPHPSHP 420
           IRVTGDKKQIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGG  QWG RGPHPSHP
Sbjct: 361 IRVTGDKKQIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGGPTQWGHRGPHPSHP 420

Query: 421 AAYDYPHRGPYPSHNTQYQHPAFGNYPQQMGGPRSSYSSGWEQRPPPSMQGPPPSSGGYD 480
           AAYDYPHRGPYPSHNTQYQHP +GNYPQQMGGPRSSY SGWEQRPPPSMQGPPPSSGGYD
Sbjct: 421 AAYDYPHRGPYPSHNTQYQHPGYGNYPQQMGGPRSSYGSGWEQRPPPSMQGPPPSSGGYD 480

Query: 481 YYGGRSHYSDAPPSHFPGAMPAHAPGPSPAPALGPPQTQSSYNYSQQQNQGYGHAAPYSQ 538
           YYG RSHYSDAPPSHFPGAMP+HAPGPSPAP  GPPQTQSSYNYSQQQ QGYGH APYSQ
Sbjct: 481 YYGQRSHYSDAPPSHFPGAMPSHAPGPSPAPTHGPPQTQSSYNYSQQQGQGYGHTAPYSQ 505

[Close]

BLAST of Cp4.1LG02g10960 vs. ExPASy TrEMBL
Match: A0A1S3CA30 (far upstream element-binding protein 2 OS=Cucumis melo OX=3656 GN=LOC103498673 PE=4 SV=1)

HSP 1 Score: 825 bits (2132), Expect = 9.65e-294
Identity = 443/540 (82.04%), Postives = 464/540 (85.93%), Query Frame = 0


Query: 1   MAEEVVVATGAASPEPLDHKRKLADLDNEATEAPEENHGEPNEESPASDDADVAVSDESE 60
           MAEEVVVATGAASPEPLDHKRKLADLDNE TEA EENH EP E S   D ADV +SDESE
Sbjct: 1   MAEEVVVATGAASPEPLDHKRKLADLDNEPTEAAEENHSEPIEGSADPDAADVPISDESE 60

Query: 61  AKRPRLDGKPEENASENGHKKKMVEE-PAKEDDTSEEDSEHPASLEEVSEREETDKPTAE 120
           AKRPRLDGKP+ NASENGH++K  EE  AKED                            
Sbjct: 61  AKRPRLDGKPDGNASENGHEEKKEEELEAKED---------------------------- 120

Query: 121 PNEAGDALDSAEETEQPASLEEVHEKEETEQPTAEPHEAGGAQDSAAEISQEDKTQELSK 180
                     + E EQPAS+E + EKEETEQPT E HEAG AQDSAAEISQEDKTQELSK
Sbjct: 121 -------YKQSSEEEQPASVEVLPEKEETEQPTEESHEAGDAQDSAAEISQEDKTQELSK 180

Query: 181 EENQPPVVEAALPLQQEDGSNSEHGQPSSVAETTTYRMEVPNSKVGVLIGKAGDTIRYLQ 240
           EE+QPP VEAA PLQ+ED SN+E  QPSS +ETTTY+MEVPNSKVGVLIGKAGDTIRYLQ
Sbjct: 181 EESQPPEVEAAPPLQEEDVSNAEQDQPSSESETTTYKMEVPNSKVGVLIGKAGDTIRYLQ 240

Query: 241 YNSGAKIQIMRDSDADPNRLSRPVEIVGTSESIKKAEELINAVIAEADAGGSPSLIARGL 300
           YNSGAKIQIMRD++ADPNRL+RPVEI+GTSE+IKKAEELINAVIAEADAGGSPSLIARGL
Sbjct: 241 YNSGAKIQIMRDAEADPNRLTRPVEIIGTSENIKKAEELINAVIAEADAGGSPSLIARGL 300

Query: 301 TSSHSMATAEQIQIQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERT 360
           TSSHS+ATAEQIQ+QVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERT
Sbjct: 301 TSSHSIATAEQIQLQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERT 360

Query: 361 IRVTGDKKQIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGG-NQWGQRGPHPSHP 420
           IRVTGDKKQIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGG  QWG RGPHPSHP
Sbjct: 361 IRVTGDKKQIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGGPTQWGHRGPHPSHP 420

Query: 421 AAYDYPHRGPYPSHNTQYQHPAFGNYPQQMGGPRSSYSSGWEQRPPPSMQGPPPSSGGYD 480
           AAYDYPHRGPYPSHNTQYQHP +GNYPQQMGGPRSSY SGWEQRPPPSMQGPPPSSGGYD
Sbjct: 421 AAYDYPHRGPYPSHNTQYQHPGYGNYPQQMGGPRSSYGSGWEQRPPPSMQGPPPSSGGYD 480

Query: 481 YYGGRSHYSDAPPSHFPGAMPAHAPGPSPAPALGPPQTQSSYNYSQQQNQGYGHAAPYSQ 538
           YYG RSHYSDAPPSHFPGAMP+HAPGPSPAP  GPPQTQSSYNYSQQQ QGYGH APYSQ
Sbjct: 481 YYGQRSHYSDAPPSHFPGAMPSHAPGPSPAPTHGPPQTQSSYNYSQQQGQGYGHTAPYSQ 505

[Close]

BLAST of Cp4.1LG02g10960 vs. ExPASy TrEMBL
Match: A0A0A0KW47 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G649320 PE=4 SV=1)

HSP 1 Score: 813 bits (2100), Expect = 9.20e-289
Identity = 436/540 (80.74%), Postives = 464/540 (85.93%), Query Frame = 0


Query: 1   MAEEVVVATGAASPEPLDHKRKLADLDNEATEAPEENHGEPNEESPASDDADVAVSDESE 60
           MAEEVVVATGAASPEPLDHKRKL DLD+E TEA EENH EP E S A D ADV +SDESE
Sbjct: 1   MAEEVVVATGAASPEPLDHKRKLVDLDSEPTEATEENHAEPIEGSAAPDAADVPISDESE 60

Query: 61  AKRPRLDGKPEENASENGHKKKMVEE-PAKEDDTSEEDSEHPASLEEVSEREETDKPTAE 120
            KRPRL+GKPE NASENGH++K  EE   KED     + E PAS+E + E+E T++PT E
Sbjct: 61  YKRPRLEGKPEGNASENGHEEKKEEELEPKEDYKQSSEEEPPASVEVLPEKEGTEQPTEE 120

Query: 121 PNEAGDALDSAEETEQPASLEEVHEKEETEQPTAEPHEAGGAQDSAAEISQEDKTQELSK 180
           P+EAGDA DSA E                            +QDSAAEISQEDKTQELSK
Sbjct: 121 PHEAGDAQDSAAEI---------------------------SQDSAAEISQEDKTQELSK 180

Query: 181 EENQPPVVEAALPLQQEDGSNSEHGQPSSVAETTTYRMEVPNSKVGVLIGKAGDTIRYLQ 240
           EE+QP  VEAA PLQ+ED SN+E  QPSS +ETTTY+MEVPNSKVGVLIGKAGDTIRYLQ
Sbjct: 181 EESQPSEVEAAPPLQEEDISNAEQDQPSSESETTTYKMEVPNSKVGVLIGKAGDTIRYLQ 240

Query: 241 YNSGAKIQIMRDSDADPNRLSRPVEIVGTSESIKKAEELINAVIAEADAGGSPSLIARGL 300
           YNSGAKIQIMRD++ADPNRL+RPVEI+GTSE+IKKAEELINAVIAEADAGGSPSLIARGL
Sbjct: 241 YNSGAKIQIMRDAEADPNRLTRPVEIIGTSENIKKAEELINAVIAEADAGGSPSLIARGL 300

Query: 301 TSSHSMATAEQIQIQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERT 360
           TSSHS+ATAEQIQ+QVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERT
Sbjct: 301 TSSHSIATAEQIQLQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERT 360

Query: 361 IRVTGDKKQIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGG-NQWGQRGPHPSHP 420
           IRVTGDKKQIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGG  QWG RGPHPSHP
Sbjct: 361 IRVTGDKKQIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGGPTQWGHRGPHPSHP 420

Query: 421 AAYDYPHRGPYPSHNTQYQHPAFGNYPQQMGGPRSSYSSGWEQRPPPSMQGPPPSSGGYD 480
           A YDYPHRGPYPSHNTQYQHP +GNYPQQMGGPRSSY SGWEQRPPPSMQGPPPSSGGYD
Sbjct: 421 AGYDYPHRGPYPSHNTQYQHPGYGNYPQQMGGPRSSYGSGWEQRPPPSMQGPPPSSGGYD 480

Query: 481 YYGGRSHYSDAPPSHFPGAMPAHAPGPSPAPALGPPQTQSSYNYSQQQNQGYGHAAPYSQ 538
           YYG RSHYSDAPPSHFPGAMP+HAPGPSPAP  GPPQTQSSYNY+QQQ QGYGH APYSQ
Sbjct: 481 YYGQRSHYSDAPPSHFPGAMPSHAPGPSPAPTHGPPQTQSSYNYNQQQGQGYGHTAPYSQ 513

[Close]

BLAST of Cp4.1LG02g10960 vs. TAIR 10
Match: AT4G10070.1 (KH domain-containing protein )

HSP 1 Score: 349.7 bits (896), Expect = 4.2e-96
Identity = 247/536 (46.08%), Postives = 320/536 (59.70%), Query Frame = 0


Query: 13  SPEPLDHKRKLADLDNEATEAPEENHGEPNEESPASDDADVAVSDESEAKRPRL-----D 72
           S  P+D KRKL +++       + N                  SD S+AKR +L     D
Sbjct: 10  STPPVDLKRKLDEVELNGNIVDDSNQ----------------TSDSSQAKRAKLEDEAQD 69

Query: 73  GKPEENASENGHKKKMVEEPAKEDDTSEEDSEHPASLEEVSEREETDKPTAEPNEAGDAL 132
           G    N  ENG   ++ EE   + +  EE+ +    +EEV           +P  A ++ 
Sbjct: 70  GLDYGNTQENGSSMEVKEEEQLQ-EPKEENQDSVPLVEEVQ----------DPIHADESE 129

Query: 133 DSAEETEQPASLEEVHEKEETEQPTAEPHEAGGAQ----DSAAEISQEDKTQELSKEENQ 192
           +     +QP   ++  + E+ +Q   E    G  Q    D + E++ +  +QE  KEEN+
Sbjct: 130 NKICSVDQPT--DDQVKPEDNQQGCIEDVNGGEHQKVIDDDSKEVN-DGSSQENGKEENK 189

Query: 193 PPVVEAALPLQQEDGSNSEHGQPSSVAETTTYRMEVPNSKVGVLIGKAGDTIRYLQYNSG 252
              V+     ++ DG+ S           TT R++VP+SKVGVLIGK G+TIRYLQ+NSG
Sbjct: 190 E--VDGEKSQKEVDGTQS-----------TTRRIDVPSSKVGVLIGKGGETIRYLQFNSG 249

Query: 253 AKIQIMRDSDADPNRLSRPVEIVGTSESIKKAEELINAVIAEADAGGSPSLIARGLTSSH 312
           AKIQI+RDS+ADP+   RPVEI+G+   I+ AE+LI+AVIAEA+AGGSP+L+ARG  S+H
Sbjct: 250 AKIQILRDSEADPSSALRPVEIIGSVACIESAEKLISAVIAEAEAGGSPALVARGHPSTH 309

Query: 313 SMATAEQIQIQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERTIRVT 372
           ++   EQI+I+VPN+KVGLIIGRGGETIK++QTRSGAR QLIPQ+  EGD  KERT+R++
Sbjct: 310 AIGIPEQIEIKVPNDKVGLIIGRGGETIKNMQTRSGARTQLIPQH-AEGDGLKERTVRIS 369

Query: 373 GDKKQIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGG-NQWGQRGPHPSHPAAYD 432
           GDK QI+IATDMIK+VMNQ  RPS +S G+NQ AYRP+GPGG  QWG RGPH  HP  YD
Sbjct: 370 GDKMQIDIATDMIKDVMNQNARPSSYSGGYNQPAYRPQGPGGPPQWGSRGPHAPHP--YD 429

Query: 433 YPHRGPYPSHNTQYQHPAFGNYPQQMGGPRSSYSSGWEQRPPPSMQGPPPSSGGYDYYGG 492
           Y  RGPY S  + Y  P FG YP Q   PR  Y + W+QR        PP SG Y+YYG 
Sbjct: 430 YHPRGPYSSQGSYYNSPGFGGYPPQHMPPRGGYGTDWDQR--------PPYSGPYNYYGR 484

Query: 493 RSHYSDAPPSHFPGAMPAHAPGPSPAPALGPPQTQSSYNYSQQQNQGYGHAAPYSQ 539
           +   S  P        P   P PSPA   GPP +Q SY Y Q     YGHAAPYSQ
Sbjct: 490 QGAQSAGP------VPPPSGPVPSPAFG-GPPLSQVSYGYGQSHGPEYGHAAPYSQ 484

[Close]

BLAST of Cp4.1LG02g10960 vs. TAIR 10
Match: AT1G33680.1 (KH domain-containing protein )

HSP 1 Score: 314.7 bits (805), Expect = 1.5e-85
Identity = 244/579 (42.14%), Postives = 325/579 (56.13%), Query Frame = 0


Query: 1   MAEEVVVATGAASPEPLDHKRKLADLDNEATEAPEENHGEPNEESPASDDADVAVSDESE 60
           MAEE V+A      +P DHKRKL +L++E  E  +++ G  + +    DD +   SD  +
Sbjct: 1   MAEEEVIAIPV---QPSDHKRKLENLESEILE--QQHAGSIDNDVSVDDDKN--ASDYCQ 60

Query: 61  AKRPRLD---------GKPEENASENGHKKKMVEEPAKEDDTSEEDSEHPASLEEVSERE 120
            KRP+LD         G   EN+ +   K++  E+P  + D +++ +     ++E  + E
Sbjct: 61  PKRPKLDDEAVDGLGIGGTVENSGDVESKEEGTEKPIAQSDENQDGNPLIEKVQETIDAE 120

Query: 121 ETDKPTAEPNEAGDALDSAEE--TEQPASLEEVHE-------------KEETEQPTAEPH 180
           E+D    +  +  D      E  T Q  S+EE  E              +ET    A+  
Sbjct: 121 ESDNKMEDNGKPEDNQLVTPEVVTSQDVSVEESKEVNISGSQNEGEDDSKETNDVVAQKE 180

Query: 181 EAGGAQ---DSAAEISQEDKTQELSKEENQPPVVEAALPLQQEDGSNSEHGQPSSVAETT 240
              G++   D  ++   E      SKE N     +      +E    S H +     ++T
Sbjct: 181 VENGSKEVTDCDSQKEDEANAGGESKEVNGSVSHDEIGDESKEVNGGSTHKEVDD-TQST 240

Query: 241 TYRMEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDSDADPNRLSRPVEIVGTSESIK 300
           T R++VP+SKVG LIGK G+ +RYLQ NSGAKIQI RD++ADP+   RPVEI+GT   I+
Sbjct: 241 TRRIDVPSSKVGTLIGKGGEMVRYLQVNSGAKIQIRRDAEADPSSALRPVEIIGTVSCIE 300

Query: 301 KAEELINAVIAEADAGGSPSLIARGLTSSHSMATAEQIQIQVPNEKVGLIIGRGGETIKS 360
           KAE+LINAVIAE +AGG P+L ARG+         EQ++I+VP++KVG+IIGRGGETIK+
Sbjct: 301 KAEKLINAVIAEVEAGGVPALAARGV--------PEQMEIKVPSDKVGVIIGRGGETIKN 360

Query: 361 LQTRSGARIQLIPQNLPEGDESKERTIRVTGDKKQIEIATDMIKEVMNQTVRPSPHSTGF 420
           +QT+S ARIQLIPQN  EGD SKERT+R++GDK+QI+IAT +IK+VM Q  RPSP+S GF
Sbjct: 361 MQTKSRARIQLIPQN--EGDASKERTVRISGDKRQIDIATALIKDVMYQDGRPSPYSGGF 420

Query: 421 NQQAYRPRGPGG-NQWGQRGPHPSHPAAYDYPHRGPYPSHNTQYQHPAFGNYPQQMGGPR 480
           NQQAY+PRGPGG  QWG RGPH  H   Y+Y H GPYPS  + ++ P  G YP Q   PR
Sbjct: 421 NQQAYQPRGPGGPPQWGSRGPHGPHSMPYNYHHGGPYPSQGSHFRPPNSGGYPPQHMPPR 480

Query: 481 SSYSSGWEQRPPPSMQGPPPSSGGYDYYGGRSHYSDAPPSHFPGAMPAHAPGPSPAPAL- 539
           S Y SGWEQR        PP SG YDYYG +   +       PG +P+H    S A A  
Sbjct: 481 SGYGSGWEQR--------PPHSGPYDYYGRQGGQN-------PGPVPSHGASYSQAGAQQ 540

[Close]

BLAST of Cp4.1LG02g10960 vs. TAIR 10
Match: AT2G25970.1 (KH domain-containing protein )

HSP 1 Score: 165.2 bits (417), Expect = 1.5e-40
Identity = 169/496 (34.07%), Postives = 240/496 (48.39%), Query Frame = 0


Query: 74  ASENGHKKKMVEEPAKEDDTSEED---SEHPASLEEVSEREETDKPTAEPNEAGDALDSA 133
           +S+    K+  EEP     ++      S  P     V     T  P +  N     +D  
Sbjct: 8   SSDTYSNKRKYEEPTAPPPSTRRPTGFSSGPIPSASVDPTAPTGLPPSSYNSVPPPMDEI 67

Query: 134 EETEQPASLEEVHEKEETEQPTAEPHEAGGAQDSAAEISQEDKTQELSKEENQPPVVEAA 193
           +  +Q A  +E+  +         P    GA     +   +  +   S+ +     V ++
Sbjct: 68  QIAKQKA--QEIAARLLNSADAKRPRVDNGASYDYGD--NKGFSSYPSEGKQMSGTVPSS 127

Query: 194 LPLQQEDGSNSEHGQPSSVAETTTYRMEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMR 253
           +P+    GS           + TT ++++PN +VGV+IGK G+TI+YLQ  SGAKIQ+ R
Sbjct: 128 IPVSY--GS----------FQGTTKKIDIPNMRVGVIIGKGGETIKYLQLQSGAKIQVTR 187

Query: 254 DSDADPNRLSRPVEIVGTSESIKKAEELINAVIAEADAGGSPSLIARGLTSSHSMATAEQ 313
           D DADPN  +R V++ GT + I KAE+LI  V+ EA+AG +      G       A A+Q
Sbjct: 188 DMDADPNCATRTVDLTGTPDQISKAEQLITDVLQEAEAGNTAGSGGGGGRRMGGQAGADQ 247

Query: 314 IQIQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERTIRVTGDKKQIE 373
             +++PN KVGLIIG+GGETIKS+Q ++GARIQ+IP +LP GD + ERT+++ G  +QIE
Sbjct: 248 FVMKIPNNKVGLIIGKGGETIKSMQAKTGARIQVIPLHLPPGDPTPERTLQIDGITEQIE 307

Query: 374 IATDMIKEVMN--QTVRPSPHSTGFNQQ-AYRPRGPGGNQWGQRGPHPSHPAAYDYPHRG 433
            A  ++ E+++    +R S    G+ QQ  Y+ R P  + W   G  P+ P    Y   G
Sbjct: 308 HAKQLVNEIISGENRMRNSAMGGGYPQQGGYQARPP--SSWAPPGGPPAQPGYGGYMQPG 367

Query: 434 PYPSHNTQYQHPAFGNYPQQMGGPRSSYSSGWEQRPPPSMQGPPPSSGGYDYYGGR---- 493
            YP    QY    +G+YPQQ        SS      PPS Q    + G YDYYG +    
Sbjct: 368 AYPG-PPQYGQSPYGSYPQQTSAGYYDQSS-----VPPSQQS---AQGEYDYYGQQQSQQ 427

Query: 494 --SHYSDAPPSHFPG-AMPAHAPGPSPAPALGPPQTQSSYN-YSQQQNQGYGHAAPYSQX 553
             S  S APP+   G     HA G   A   G    Q  Y  Y+  Q  GYG AA Y Q 
Sbjct: 428 PSSGGSSAPPTDTTGYNYYQHASGYGQA---GQGYQQDGYGAYNASQQSGYGQAAGYDQQ 471

Query: 554 KIGKKKKKKKEEEEED 556
             G         +EED
Sbjct: 488 --GGYGSTTNPSQEED 471

[Close]

BLAST of Cp4.1LG02g10960 vs. TAIR 10
Match: AT5G04430.1 (binding to TOMV RNA 1L (long form) )

HSP 1 Score: 71.6 bits (174), Expect = 2.2e-12
Identity = 63/213 (29.58%), Postives = 99/213 (46.48%), Query Frame = 0


Query: 202 EHGQPSSVAETTTYRMEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDSDADPNRLSR 261
           +  +  S  + T  R  V N+  G +IGK G TI   Q  SGA+IQ+ R+ +  P    R
Sbjct: 24  DSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDR 83

Query: 262 PVEIVGTSESIKKAEELI-NAVIAEADAGGSPSLIARGLTSSHSMATAEQIQIQVPNEKV 321
            + I G+ + +    ELI + + +E  A              + +    +I++ VPN   
Sbjct: 84  IIMISGSIKEVVNGLELILDKLHSELHA-----------EDGNEVEPRRRIRLVVPNSSC 143

Query: 322 GLIIGRGGETIKSLQTRSGARIQLIP-QNLPEGDESKERTIRVTGDKKQIEIATDMI--- 381
           G IIG+GG TIKS    S A I++ P  N   G    +R + ++G  ++   A D+I   
Sbjct: 144 GGIIGKGGATIKSFIEESKAGIKISPLDNTFYG--LSDRLVTLSGTFEEQMRAIDLILAK 203

Query: 382 ---KEVMNQTVR-PSPHSTGFNQQAYRPRGPGG 406
               +  +Q V  P  ++ G+N   Y P G GG
Sbjct: 204 LTEDDHYSQNVHSPYSYAAGYNSVNYAPNGSGG 223

[Close]

BLAST of Cp4.1LG02g10960 vs. TAIR 10
Match: AT5G04430.2 (binding to TOMV RNA 1L (long form) )

HSP 1 Score: 63.9 bits (154), Expect = 4.6e-10
Identity = 62/234 (26.50%), Postives = 97/234 (41.45%), Query Frame = 0


Query: 202 EHGQPSSVAETTTYRMEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDSDADPNRLSR 261
           +  +  S  + T  R  V N+  G +IGK G TI   Q  SGA+IQ+ R+ +  P    R
Sbjct: 24  DSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDR 83

Query: 262 PVEIVGTSESIKKAEELI-NAVIAEADAGGSPSLIARGLTSSHSMATAEQIQIQVPNEKV 321
            + I G+ + +    ELI + + +E  A              + +    +I++ VPN   
Sbjct: 84  IIMISGSIKEVVNGLELILDKLHSELHA-----------EDGNEVEPRRRIRLVVPNSSC 143

Query: 322 GLIIGRGGETIKSLQTRSGARIQLIP-QNLPEGDESKERTIRVTGDKKQIEIATDMIKEV 381
           G IIG+GG TIKS    S A I++ P  N   G    +R + ++G  ++   A D+I   
Sbjct: 144 GGIIGKGGATIKSFIEESKAGIKISPLDNTFYG--LSDRLVTLSGTFEEQMRAIDLILAK 203

Query: 382 MNQT----------------------------VRPSPHSTGFNQQAYRPRGPGG 406
           + +                               PS  + G+N   Y P G GG
Sbjct: 204 LTEDDHYSQNVHSPYSYAGLFYSGFHGPPYAYALPSVATAGYNSVNYAPNGSGG 244

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g10960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3U0V1	1.7e-17	31.41	Far upstream element-binding protein 2 OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV...	[more]
Q99PF5	1.7e-17	31.41	Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE...	[more]
Q96AE4	2.9e-17	32.69	Far upstream element-binding protein 1 OS=Homo sapiens OX=9606 GN=FUBP1 PE=1 SV=...	[more]
Q96I24	3.8e-17	30.51	Far upstream element-binding protein 3 OS=Homo sapiens OX=9606 GN=FUBP3 PE=1 SV=...	[more]
Q92945	8.4e-17	30.33	Far upstream element-binding protein 2 OS=Homo sapiens OX=9606 GN=KHSRP PE=1 SV=...	[more]

BLAST of Cp4.1LG02g10960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023524727.1	0.0	100.00	far upstream element-binding protein 2-like isoform X1 [Cucurbita pepo subsp. pe...	[more]
KAG6607520.1	0.0	99.07	Far upstream element-binding protein 3, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_022948485.1	0.0	98.88	far upstream element-binding protein 2-like [Cucurbita moschata]	[more]
XP_022973378.1	0.0	98.33	far upstream element-binding protein 1-like [Cucurbita maxima]	[more]
XP_038890334.1	1.31e-293	81.85	far upstream element-binding protein 2 [Benincasa hispida]	[more]

BLAST of Cp4.1LG02g10960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G9Z3	0.0	98.88	far upstream element-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1ICW3	0.0	98.33	far upstream element-binding protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A5D3BKY3	9.65e-294	82.04	Far upstream element-binding protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3CA30	9.65e-294	82.04	far upstream element-binding protein 2 OS=Cucumis melo OX=3656 GN=LOC103498673 P...	[more]
A0A0A0KW47	9.20e-289	80.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G649320 PE=4 SV=1	[more]

BLAST of Cp4.1LG02g10960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10070.1	4.2e-96	46.08	KH domain-containing protein	[more]
AT1G33680.1	1.5e-85	42.14	KH domain-containing protein	[more]
AT2G25970.1	1.5e-40	34.07	KH domain-containing protein	[more]
AT5G04430.1	2.2e-12	29.58	binding to TOMV RNA 1L (long form)	[more]
AT5G04430.2	4.6e-10	26.50	binding to TOMV RNA 1L (long form)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 211..284 e-value: 1.8E-16 score: 70.7 coord: 307..381 e-value: 9.8E-18 score: 74.9
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 214..280 e-value: 5.8E-16 score: 58.1 coord: 311..378 e-value: 2.0E-18 score: 66.0
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 299..413 e-value: 1.6E-22 score: 81.3
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 199..288 e-value: 3.6E-21 score: 76.7
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 202..286
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 311..404
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 496..512
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 384..401
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 513..533
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 384..556
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 430..463
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 178..493
None	No IPR available	PANTHER	PTHR10288:SF289	RNA-BINDING PROTEIN NOVA-1	coord: 178..493
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 308..376 score: 18.239655
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 212..279 score: 17.946171
None	No IPR available	CDD	cd00105	KH-I	coord: 311..377 e-value: 2.94625E-18 score: 76.8299
None	No IPR available	CDD	cd00105	KH-I	coord: 214..279 e-value: 9.39381E-16 score: 69.8963

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g10960.1	Cp4.1LG02g10960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding