Cp4.1LG02g10460 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g10460
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Hornerin like
Location	Cp4.1LG02: 9649738 .. 9659786 (-)
RNA-Seq Expression	Cp4.1LG02g10460
Synteny	Cp4.1LG02g10460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCTTGTATTTGTCTGTAATTGCAACAGCTAAACAAGACGGTCAGTGGGGTTTGGAGATTACAAAGGGCCCTGCAAACTGCAGCACACCAAGCCAGTTCATCAGTGATTCCTTTGGTAAAAACAATGCAATGCTTGAACAACTCACTCTTTGCCATTTCTGCTATCATTTAGTGGTTGAGCCTATCCATTTATCCCACTTTTCAAAAGCATAATCAAACACAACCCCCCCAACCAACCAAAAGCAAGGAAATATATACAGCTCAACACAGGGGAGGGCAGGGGAGAGGAGGCAGCCTTCTCAATACACAAAAATCCAGGCATTGAAATGGGGAAGACAAGCAGCAGCAGCAGCATCATCAGAACATCAATCTTCAGTTTCCTGCAGAATTATCAGTATTTTACCTCTTTTTCAGCATTCCTTGCATTTCCCTTCTCAGTTTCTCTTCTTCTCTCACAAACTTTTGTTTTTACTTCCTTCACTTCTCTTCTTCCAAGCATATACCATCGCTTCAACATCCTTTTTGATGCTGCAGGATTCCCTCCTTCCTTGGAATCCTTATCCATTTTCACTCACAAGCTTTCCCAAACGATATTTTCTTCCATCTTCACTCTTCCTTTCACTCTTACCTTTCTGCTTATTGCAAAAGCCTCTGTTCTACAAGCTTTCAAGGACACCAAACCAAGCTCTCACCCCTCCTTTTCCTCTATCAGATCCCTTTACACTCCTCTTCTTTTCACCCATATTTGCAACTCAATCCTCATACTCTCAGCAAATGCAACAGTCTTTTCTATACTTTTCTTCTCTTTCAATTCCCTTGAAGGGTTTGGCTTTTCTTCTTCCACCAGCTTCCTTTGGTTCTCAGCAGCTGGAGCTGTCCTGTATTCATTAGTTCTGGCAAATACAATGGTTATCAGCAACCTAGCATTAGTTTTGTCAGGCATGGAAAGGCTTGGAGGTTACTTTGCAATACTCAAGGCTTGTGTTCTGATAAGAGGGAAAACTTCCACAGCATTACTTTTGGCTCTGCCTACAAATTTAGCCATGGCTGCAATTGAAGCCTTGTTCCAGTACCGTGTAGTGAGAGCTTATATTGTTGTTGGAAGGGTAAGCCTTTCTATGGTGTCGGAAGGGATCATCATTGCATATTTGTACTCCATTTTCATTGTCCTCGACACCGTGGTGAGTTGTCTGTTCTTCAAGAGTTGCAAGCCAGTTTACTGGGTGGATCTGGAAGGAAGACAAGCTCTTCAAATAGACTCTGTAGAAGAAGACGATGGTGGCTGCATCGATTCAAAGGCTCTACATCACCTGCATTCAACTACTTGTGGATAATCCATCCAACATGACAATCTGCAGGAAAAAAGTATATAGAATTCAATTAAAGAACAATAAAAGCCCGTGGAATTCATTCAACAAGCAACTTTATTTTTTCATACGGATAAGCATCTACAGTAGAAACAAAGATCTAGGAGCAGAAACCATGTGAAAAATCTGTAGCTGTTCCTTCAGTTCTCTCTGTTCTTGCCGTTTGTCTTTTATGTATTTTACCTTGGTGTTCGCATTGTAGATATCCGAGAGTTGAATTGTAGTAGAATATACAAACCTCCATTTCTTGATTGAAGAATAAAACTCAATTTCTAGCATCCTAGTTCAGAAGCCTTGAAAAGCTCGCTTCAGATCTTCAAATCTTCAAACATTTCTTCTTTTGAACACATCTGATTCTCTCAGCTAACCCGAATGTTTGGGCATTATGTGCAAAAAATAACTCTTGTTTCAAGCAATAATTGACGAACCCAGATGGAAAATGCATTAAAAACAGAGCCTTGATCTGGTCCAGATGGAAAATGTTTGGGCATTATGTGGAAAAGATAACTCTTGTTTCAAGCAACAGTTGACGAACCCAGATGGAAAATGCATTAAAAACAGAGCCTTTGCTCGTGGGTTAGAAGTTAGAACTCTAGGTAGGAGCAGGACGGTAGAAGAACACANCAAATTTTTGTATGTTTATAAATTCAAAAATTAGGTCAAATATTGAAGTTCTTTAATAATGTTGATGAAAAAATTGAAGTTCTTCTGAACTTCCATGCATTTATGGTGATTTGAAAAACTATGATCTCTAGAAACTAGATTCTAGCAATTGTGGGGTCAATTTGGGAGCCCATTTTCTTGATGTACTTATGATTAGCTTGCTTCCTTGTACTATATATATATATATATATATATATATATATATATGCAAGAAGGCCCCACTACTCTGCCAAATGTTGATAGCTTCATGCTCTGTCTAAGAAGTAGAGTAGTACTTTTATGTTACAGTCACAGAAGTTAGCTATGGCTGACTTCTAACATCTTAACTAAAGAGCTATACATCATCTTCAGGGACAGAACCTCTGAAATTTATGTTACAGACTTGGTGTCAGTCATAAGATATGAACAGGGAGAGAGCTTTGTACAGATAGCTATTGTGCTGGTGGGTGTTAGATCCTACGGCTAAAGCCTGAACGGTTCTTAGGCGCTGGTCTATTGTAAATCTGAAATCAAATTTCTCTACTTACATGAACTCTTTCAAGAAGGCTATGACTCCAAAGGGCCTGATCCTTCCAATGGATCTAAGTAACTCAGATTCTGCAGAAAAAAGTAAGCCTATGTTTCCTTTACTTCTTGATCCTACGTTATGACCACATAAGATTGAAGTAAAATTTTGTTCGTTCGGAGAGAATTCAGAGTCATAATTTTGGCATAGCATGGATGATCCTTGTCCTAGATTAGCCTTGTGGGATGCTAAAGTTTCTGCAGTTTCCAAATTCTATCGATCTTAGATTTCTGGTGTGTCCTAAGAAAGGATCTTTTTGACATCCTCGGATACTATCGTCGAATTGAATATCACCCCTCACAAACTTCTTCATCAGCTTGATGATGCTCGTGGCCTTTTTCCAAATTTCACTTATTTTCTCAGCCTTCTCATCTCCATTTCCAACTGCTTGCAATTCTCTGCGTGTGCTTTCATAAAGGAACGAGTAAAATGGAAGAGAGTTCCTGTAACTGCATTGGATTGAACACAAGGAATCAGATCCCGCATGACAACGACCGGGTAGAGATAGGATACTCTATACAGATGATGATCCTTCTGACTCATTAGTAAACTAAGCTACATGAGGAATGATGTAATGCAGACTCTGCAGCTATTACCACAAAACAAGAGACAACAAAAAGCCAAGCTGTGTACCATTTACTAACCTTGTTCAAATGGACAACGGGCAGGATCCTCGCCAAAATATTGTGTAAGTGCGTCCGCATTTCTACCCTGCCACAAAGCAGTAAGAAAAAGCATATTCTATTTGATTTCTCAATAGCTTCAAACTATAATTCAACATAAATGATCTGGTCTAGAAGATTACCGTCCCCGAGTAAAGAACGGTCACAGATTCCACCTCCTTCTCGGCAAGAGTAACAAATCCTTTCAATGTCTAAAAGTACAAGATAAAGAATTGTTTAAACCACTGTAAGTGTTCAGGATGACTATGTTTGTGTGTGCATCTGGGGTGATGAGAGGGACCAAACCAAAAGAGTGTTTGCATAGTTATGATGTCAAGAATGCCAACAAAAGAATTTTGTTTTTTAGTACAAAACTGCTTTATTTCATTCTTTCACACCAAATCTCAGGGAATGGGGGGAAAGAAGAAAGATTTTGTACCTTACGAAAAGCTTCGGAGATGGGGCCGTCGCTTTCAGATGCAACTAGTTCTTGCTTCACCTTTTCCAATCCTTTTGTTATTGCTTGCATTTCTTCTGCCAAGGACTTCAATTGTATCTGCATGAGAAGCAAGACCCCATGTCAAACAAGTTTTCTATACATAATGTTTGAATTTAATACCAAGAAATATGGAGACCTTAGATGCGGCTTCCAAGCTACTAAGGTCCAGATGAAAATCAAGAAGCGACGGTGACTTCGAAGCAAGGACCTGAAGCATGCATAAACCAACTTTGTGAACAGCCTGCCACACTTGAGAGAAGGAGGGGATTGGGGAAATATAAAAAGATAAAAATTTCACTCCACAATATACTCCCTCTTTAGGATGAGATATCATCGAAACCTTTCTAATAAAAACCGCAAGTATAGTATCAAAGCTATATAACCTCTCATTCTCGCACTTTCCAAATATTTATCAGGATAGAACTATTAAAATTTATCAATAAGACAGATGAATTAAAATAGTACCTTACAGAGATAATGCATGAGAGTCATCTTATTGTTAGTAGCACGTGTATCAGTGAGTTTCGAGAGACTATCCAACCTGAATCCAATGGCAGAACCTGCATGGTATGCCTTTGGCTAGTAATGTATCCAAAATTGATGGACTAAAACACTTCGTGAACATGAAATTATGGTGTCATATTGACCCATTTACGTATCATGATGTAAGCTAAAAGTGTGTTATCTAACAAAGATGCAAGAAGTTTCTTACCCCTAGCAGTTCCTTGGTTCAGCATATTTCCCAGGCAAAGAATTCTCTTCAATATTTCCTTCAATTTGCAAGAGTTCTTCACCTATTAAAACAGTAATGTAAATTAATGGGCTGAGATTTGAAATATATCGAACAAGCGGAGGAACGTATTCATTATCATTAGCAATTGACCTCTTGACAGACAGAGTTTACAGTGTTTAGGCTTTTTCTGAACTCTATTATCTGCAAAGGAGGTCAAGAATCAATATATAGAGAAAAACTAAAGAGGATAAAAATGAAGAGACGCAGATACCACAGAACCTGAGAGCTGAAGTGAATCTTAAAAGAGAACACTCTTAACTTCGACTCCACACGAGGAACTTGCATCATCTCCAAAAAGTACTGATGCGTGAACAAATGAAAAATGAAAAGAAAACATGTAATTTGAATCAGAAAAAAATCGAAACCAAGAAAATGTCAACCCCCAAACCAAAAAACATAACACAGTCTATGACTGTTCAACAGAGCAACTGAAAATTACCTGTTCGCACTTTCCGAGTTTTTCCTTGTCACCACAGTATCCCTTAATAATTTAAGCACGAGAAATCTTTAGTTAATTGATCATAAGTAAAGAGCATCAGGCGACAGAACATTTAATACGAGCAGGATATCACTTCCATAATAGGAAGAATCTAAGAACGGAAAATCGAATAAAGGATCATCAAATAGTATTTTACAAGATCTTTCACCTTGAGAAGTTCCATCTCCTCTTTGGTGGGGCAAAATTTGATAAGATTTTCCACTTGATCTACATCTAATATGGATTCATCCATGGAGAGTACTGCTGCCTGTATTATACGATGAATCGACAATTGTAAGAAAATAATCTGCTCGATCATTTTAATCTTCCAGGTCTGAAACAATGCTTACTCACGTGAGAAATTTCAGTAACAGTAAGAATGCAGTACGAGAACAAGCACAAAAAGATCTGAAATTTGCCACCAACAGTTTGATACTGTATTTTCCAACTCCTAAATATTGGCTACCATGGTGAAAGGATGAGCTGGGGTTGAAATAAGGTTTTAGCTGTAAGATCAAACTCCAACTCTTAAATCTCTCTTTTTCAAGAAGAAATTTGTGCAAGCATGAAAGTGAAAAGGAGGAATCCTATATAGCGTTGACATAAAATAAGACATCATAAATTCTCGGATAGTCCATACTGCACAAAATGAAACTAAATCATGATATTTTCTATTAAGTTTAAAGCAAACCTTTCAAAACTGAGATTTTTAAGTCACTAAAATCTTCTATCTGAATTCAAATTTTTCTACAGTTATTCAGTACCAGAGCCACCCAACAACGTTCCATATGATATAGAGGCTAGCAATCATTAAATCAGAATTTATGGCGCTGGGAAGTTGATGACGGGAAAAATTAGTCTATGCCAAAGAGAAATATCCAATGTATCTATAACTTTTCTTGGCTTACCATCATGTCAGACAGTGGCATTCTAACTTTTGTTAGCATGATTTCAGTGTTATTTGCCCGCCTAAGATCAATCTGCAATTAAATATTACATCAACTCTAGTTGCACCAACAGTTAAAGACTCGATCACATAAAACATATATTTTATTGTTCTACAGTACCAAGTGAACTTTGTCCAGTTTTGATCCAACTGACTTCCTTCGTCCTCCAGATTTACCTCCTGAATCAACAATAGGTTTAGGGACAGTCACAGAGAAAAGTGTCTCCAGCTCAGCTACATCAAATTCTGGTGCACTAAGAAGAATATCGAAACTTGGTTATTACAAGGATAGTGAATGCTGAAGATTAAAGGAACTTATGGCATCTAGGCCAAAATACACAGTTTGAAAGTGGATAGTGAAAAATATCACAATCGAAATGAAAGAGTAGATTCACAGAAGAGTTTGTAATACCTTTCAGGATCTCCAAATCTTTGCAATTCTTCCCATAAGCTCCCTTGTAGTACCCGAGTCACCTTGCTCCAATGCAGAGGTTTTAATGATGATCGTTGAGGTCCTATAGCAGCCACCCCCATGCCCATTGACCGCGAGAACCCACGTCCCCTCACAACAGATGATGTTTTCACATCAGTTGAAGAATTTACTCCTTTAGCTACCGGGTGTGGAGACATACCTCCTGAAGGTCTGGAAGGAGAAGGAACCAGTGGAAGGGGACCTGTCGTAGGTGGAGGAGGTGATGGCGCATTAGAAATTGGAGACGGCAATGATGATGACACCACACAGGTTGTTGGAGATTTTAAAGCCTGTCGCCCTTGGATTAAATGTGGAGGAGCTTTCTGAATTGGAGGAGGTGGGGGAGGGGGTGGTGGAAAAGCTCCAGCATTAGATAGGCGTGGAGGAAGCAAAGCTCCAGGTGAACGGGGTGGCTGTGGGGGAGGTAATTGTGGTTGAGCTTTACGTACAGGAGGTGGAGGTGGTACTGGTGGAGCTCTATGCTTAGGTGCATTTCCACGCACCAACGCTGAACTTTTAGAGGCCACGTGACTGGAAGGTGGAGGAGGTAGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGAGGTGGTGGAGATCTAGCATTTATGTGAATATATGAAGAGGGTGGCAAAGAAGATTTAGGAGATGATGTATGCAAGAAAGACGTGTTAGCATGAAGAGCTGGTGACCGTAGAGTAGGATCTTGATGCAGAATAGCATTTGGTAATTGGTTTGGGGAGCTAAGTGGGGATTGTGGTTTACTCGTGGGAGTCTCTGTTGCAGAACAACATAAAGGCCTTCTAGGACTCACCATGTTACAGTTTTGTTCATCTGCTGTATCAGTTGACAGCAGCAGTCCTAAAGTAATAGAAGCAGGTTTTGAAGTTGAATATGAATAAGAATCTCTAGTAGGAGAACTAATACATGTTGCTGAGGCACCAGTATGCCATGATGATGGATAAAACACATGCATGGAGTTTATGTAAGATTCTTTGTCATGTGGAGTCCATCTAGAAAGAGTTTTTGGTTTTTCCTGTATAAGAGAGCCCTGATCTTCTGGTTGTTTGGTCTTCTGTTTAGCTAAGGTTGTATTATTTAATAGCTTAGCTGTTGACGAAGGCTGTTTCCTAGATGCTAGTGGCTGCAACTTCTCATATTTAAGCCTCCACGCATCAGAATCCAACTTTTTCGCAGGAACCTTCGATTCGAAGTCTGGAATAGCAGTATCTTCTAGATACCCTTGATGCTCAACCTCTTCCAACTTGTTGTACACATCGTCTATCAGTTCCTTGATTCCCATGCGTCTCAGTACGTTAACAGAAAATAGCGGAGGATTTGGCTTTTTATCTGAATAATCCATAACAATGTCCTTCACTACATGAAGACCAGAGTCCATTTTTTCATCTCGCTTGAAAGTCACGTCATCGACAGTGATGTCCTTCACTGCTTCAACGTTACAATCGATCTTCTTGTCCAAGTTTCGACTCCCTCCAAAAGATTTACAGCGTTGGAATGTAGGAGGATCTGCATCTTCCTTCCAAACTGTTTGATGATCAATATCATCTACTTCATTAGCATGTACCATTTGAACATCGTATTCCTGCACGTCAACTATATTGCTAAATATTTCTTCCACTTCAAAAAACTCCTCAGTCGAATTGCTTACTATTTCAATTTTGTCATCACTTTTCGTTACAGGAGAGACGTTTGGCACTGCATCATCAGCATCCAGAAAAAGTACCTGACATATGAGTATTCCTTCAAATTCAAAGACTTCAAAGAAAAAAGATTAACAGAAAAGAAACAACAGCCTACCTCTACTCCAAAATCTTTAGGAAACTGCCCCTTGGCATCCCATATAATATCAACCTCATCACGATTGAGCTTCAAATTGTTTGAATGCACAAACGCCGTGTGAAACATGACTCTAAATATCACTTCCTCGCGTATTAGATCACCATCTAAATGGATGCACTCAAGAACAACATCCCCTTGAACATGACAATGGACGTCCAGTTTTACCAGTCCGCTTGCTGCCTGCAATTAAATGCAAGAAGGCATTGAAATATTTGCCAAATTCTTGTCACTGCAATTTTGTGACTACGGTTTTACCTGTAGATACTGGCAACCATGTTTTTTCATCTTTGCACTAGAAAAAGCAAGTTTTGGACTTTTATTTCGTGGTGTTAATGGGTCCTGGCTGTAAATGCGTATGATAGGCCTGCACCCTTTTCCTCCATCAAGCATCGGAAGGTCCCGAAGTATCAGACACTCTAAAATTAGAGGTGAATCAGGTGGAGGCCAATCAGAACCTAGGTTTCTCCTAGAAATATACTGAAGGTATCTCATTTGAGAAGGCTGTGAGTTTATCTGAGAAAGAACATGGAAAAGTTCTCTAGGAGCTTGCCTGTAGACCATTTCAAGGGTCTTTTGCTCCCCCTCATATTGTTTGCGGTACAATAAGAGACCTGAAAGCATGAAAGCAAGGATTGGCCATCCTCCTTGTTCACAGTTCATCAACAATACATTTTTCTGTCTCTCAGAGGACAACCAGCTTTCACTCGACCGAATGAAGTGGTGGATCATCTCCAATGGCAGTAGTGGACACCCTTCATATTGCAGAGGATACTCCATAACTGTCATACCATAATGAGACAATATATCTGAAGTTCTAGTCTTCCTCTTTCGTTCACTAAAGTTAAACACCATGAAAGAAGCATCAGGAAAGTGGTCTTGCAGCTTTGGTATAATGCTAGCAAAGTACACTTTGTATTCATCCTCTTCCAAGACGTCCGTAGAGAAGCAACAATCAAACACTGGAAAAAAAGAATGAGGATTTTTCACTCCACAGAAAAATAAGCAGCTTCCTACAAATAACAAAAAGTTGGGGACACTGCAAAAGATTTTCATACATACCTAAGCCACTACTACCAAATATTGTCCTCTTTGGGCTTTTACTCAAGGTTTTAAAAAGGTTTTCCGACACACTCAAGGTTTTAAAAAGGTTTTAAGACACTGAGAGGTTGCACATCCTTATAAGCAATGTTTCGTTCCCCTCTCCAACCGATGTGAGATCTCACAATCCACCCCCTTGGGGCCCAGCGTCCTCGCTGGCACACCGCCCGATGTCTGGCTCTGATACCATTTGTAACAGTCCAAGCACATCGCTAGCTGATATTGTCCTTTCTTAGCTTTCTCTCAAGGTTTTAAAACGCATCTGGTAGGGGAAGGTTTCCACACCGTTAAAAGCAATGTTTTGTTCACCTCTCCAAATGGTGGGATCACAAAAGAACATTAGGTGAACAGAACCAGGCTCCAAAAAATCAATTAACTGCTTCAATTTGCGAAGAGTAAATCTTGCCTCATGACTATAGATCCATGCAGTAAGTCAAAGATATCAGCTTATCAGTCTAACAAAAATCTCGAACAGAAAGAAAATGGGAACAAAAGATCATGGTCAAATTAGAATGGCGTACACAACAATAGTGAATGTCTACAGAGAAATGGAGAAGAGAAGAACTGTTATAAGTATGTCAGAACTCCCAAACCAAACTCAAACGCGCACAGAAGTAAAGAAAGAAGCTCAATTCGACAATATTTAG

mRNA sequence

ATGGCTCTTCTAAACAAGACGGTCAGTGGGGTTTGGAGATTACAAAGGGCCCTGCAAACTGCAGCACACCAAGCCAGTTCATCAGTGATTCCTTTGGGGAGGGCAGGGGAGAGGAGGCAGCCTTCTCAATACACAAAAATCCAGGCATTGAAATGGGGAAGACAAGCAGCAGCAGCAGCATCATCAGAACATCAATCTTCAGTTTCCTGCAGAATTATCAGGTTTGGCTTTTCTTCTTCCACCAGCTTCCTTTGGTTCTCAGCAGCTGGAGCTGTCCTGTATTCATTAGTTCTGGCAAATACAATGGTTATCAGCAACCTAGCATTAGTTTTGTCAGGCATGGAAAGGCTTGGAGGTTACTTTGCAATACTCAAGGCTTGTGTTCTGATAAGAGGGAAAACTTCCACAGCATTACTTTTGGCTCTGCCTACAAATTTAGCCATGGCTGCAATTGAAGCCTTGTTCCAGTACCGTGTAGTGAGAGCTTATATTGTTGTTGGAAGGTTGACGAACCCAGATGGAAAATGCATTAAAAACAGAGCCTTTGCTCGTGGGTTAGAAGTTAGAACTCTAGGTAGGAGCAGGACGCCTTCTCATCTCCATTTCCAACTGCTTGCAATTCTCTGCGTGTGCTTTCATAAAGGAACGAGTAAAATGGAAGAGAGTTCCTGTAACTGCATTGGATTGAACACAAGGAATCAGATCCCGCATGACAACGACCGGGGAATGGGGGGAAAGAAGAAAGATTTTGTACCTTACGAAAAGCTTCGGAGATGGGGCCGTCGCTTTCAGATGCAACTAAAATATGGAGACCTTAGATGCGGCTTCCAAGCTACTAAGGTCCAGATGAAAATCAAGAAGCGACGTTTTGATCCAACTGACTTCCTTCGTCCTCCAGATTTACCTCCTGAATCAACAATAGGTTTAGGGACAGTCACAGAGAAAAGTGTCTCCAGCTCAGCTACATCAAATTCTGGTGCACTAAGAAGAATATCGAAACTTGCAGCCACCCCCATGCCCATTGACCGCGAGAACCCACGTCCCCTCACAACAGATGATGTTTTCACATCAGTTGAAGAATTTACTCCTTTAGCTACCGGGTGTGGAGACATACCTCCTGAAGGTCTGGAAGGAGAAGGAACCAGTGGAAGGGGACCTGTCGTAGGTGGAGGAGGTGATGGCGCATTAGAAATTGGAGACGGCAATGATGATGACACCACACAGTTGACAGCAGCAGTCCTAAACTTAGCTGTTGACGAAGGCTGTTTCCTAGATGCTAGTGGCTGCAACTTCTCATATTTAAGCCTCCACGCATCAGAATCCAACTTTTTCGCAGGAACCTTCGATTCGAAGTCTGGAATAGCAGAGAGACGTTTGGCACTGCATCATCAGCATCCAGAAAAAATCCATGCAGTAAGTCAAAGATATCAGCTTATCAGTCTAACAAAAATCTCGAACAGAAAGAAAATGGGAACAAAAGATCATGGTCAAATTAGAATGGCGTACACAACAATAGTGAATGTCTACAGAGAAATGGAGAAGAGAAGAACTGTTATAAGTATGTCAGAACTCCCAAACCAAACTCAAACGCGCACAGAAGTAAAGAAAGAAGCTCAATTCGACAATATTTAG

Coding sequence (CDS)

ATGGCTCTTCTAAACAAGACGGTCAGTGGGGTTTGGAGATTACAAAGGGCCCTGCAAACTGCAGCACACCAAGCCAGTTCATCAGTGATTCCTTTGGGGAGGGCAGGGGAGAGGAGGCAGCCTTCTCAATACACAAAAATCCAGGCATTGAAATGGGGAAGACAAGCAGCAGCAGCAGCATCATCAGAACATCAATCTTCAGTTTCCTGCAGAATTATCAGGTTTGGCTTTTCTTCTTCCACCAGCTTCCTTTGGTTCTCAGCAGCTGGAGCTGTCCTGTATTCATTAGTTCTGGCAAATACAATGGTTATCAGCAACCTAGCATTAGTTTTGTCAGGCATGGAAAGGCTTGGAGGTTACTTTGCAATACTCAAGGCTTGTGTTCTGATAAGAGGGAAAACTTCCACAGCATTACTTTTGGCTCTGCCTACAAATTTAGCCATGGCTGCAATTGAAGCCTTGTTCCAGTACCGTGTAGTGAGAGCTTATATTGTTGTTGGAAGGTTGACGAACCCAGATGGAAAATGCATTAAAAACAGAGCCTTTGCTCGTGGGTTAGAAGTTAGAACTCTAGGTAGGAGCAGGACGCCTTCTCATCTCCATTTCCAACTGCTTGCAATTCTCTGCGTGTGCTTTCATAAAGGAACGAGTAAAATGGAAGAGAGTTCCTGTAACTGCATTGGATTGAACACAAGGAATCAGATCCCGCATGACAACGACCGGGGAATGGGGGGAAAGAAGAAAGATTTTGTACCTTACGAAAAGCTTCGGAGATGGGGCCGTCGCTTTCAGATGCAACTAAAATATGGAGACCTTAGATGCGGCTTCCAAGCTACTAAGGTCCAGATGAAAATCAAGAAGCGACGTTTTGATCCAACTGACTTCCTTCGTCCTCCAGATTTACCTCCTGAATCAACAATAGGTTTAGGGACAGTCACAGAGAAAAGTGTCTCCAGCTCAGCTACATCAAATTCTGGTGCACTAAGAAGAATATCGAAACTTGCAGCCACCCCCATGCCCATTGACCGCGAGAACCCACGTCCCCTCACAACAGATGATGTTTTCACATCAGTTGAAGAATTTACTCCTTTAGCTACCGGGTGTGGAGACATACCTCCTGAAGGTCTGGAAGGAGAAGGAACCAGTGGAAGGGGACCTGTCGTAGGTGGAGGAGGTGATGGCGCATTAGAAATTGGAGACGGCAATGATGATGACACCACACAGTTGACAGCAGCAGTCCTAAACTTAGCTGTTGACGAAGGCTGTTTCCTAGATGCTAGTGGCTGCAACTTCTCATATTTAAGCCTCCACGCATCAGAATCCAACTTTTTCGCAGGAACCTTCGATTCGAAGTCTGGAATAGCAGAGAGACGTTTGGCACTGCATCATCAGCATCCAGAAAAAATCCATGCAGTAAGTCAAAGATATCAGCTTATCAGTCTAACAAAAATCTCGAACAGAAAGAAAATGGGAACAAAAGATCATGGTCAAATTAGAATGGCGTACACAACAATAGTGAATGTCTACAGAGAAATGGAGAAGAGAAGAACTGTTATAAGTATGTCAGAACTCCCAAACCAAACTCAAACGCGCACAGAAGTAAAGAAAGAAGCTCAATTCGACAATATTTAG

Protein sequence

MALLNKTVSGVWRLQRALQTAAHQASSSVIPLGRAGERRQPSQYTKIQALKWGRQAAAAASSEHQSSVSCRIIRFGFSSSTSFLWFSAAGAVLYSLVLANTMVISNLALVLSGMERLGGYFAILKACVLIRGKTSTALLLALPTNLAMAAIEALFQYRVVRAYIVVGRLTNPDGKCIKNRAFARGLEVRTLGRSRTPSHLHFQLLAILCVCFHKGTSKMEESSCNCIGLNTRNQIPHDNDRGMGGKKKDFVPYEKLRRWGRRFQMQLKYGDLRCGFQATKVQMKIKKRRFDPTDFLRPPDLPPESTIGLGTVTEKSVSSSATSNSGALRRISKLAATPMPIDRENPRPLTTDDVFTSVEEFTPLATGCGDIPPEGLEGEGTSGRGPVVGGGGDGALEIGDGNDDDTTQLTAAVLNLAVDEGCFLDASGCNFSYLSLHASESNFFAGTFDSKSGIAERRLALHHQHPEKIHAVSQRYQLISLTKISNRKKMGTKDHGQIRMAYTTIVNVYREMEKRRTVISMSELPNQTQTRTEVKKEAQFDNI

Homology

[Close]

BLAST of Cp4.1LG02g10460 vs. NCBI nr
Match: KAG6607466.1 (hypothetical protein SDJN03_00808, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 170 bits (430), Expect = 4.24e-44
Identity = 94/96 (97.92%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 75  FGFSSSTSFLWFSAAGAVLYSLVLANTMVISNLALVLSGMERLGGYFAILKACVLIRGKT 134
           FGFSSSTSFLWFSAAGAVLYSLVLANTMVISNLALVLSGMERLGGYFAILKACVLIRGKT
Sbjct: 166 FGFSSSTSFLWFSAAGAVLYSLVLANTMVISNLALVLSGMERLGGYFAILKACVLIRGKT 225

Query: 135 STALLLALPTNLAMAAIEALFQYRVVRAYIVVGRLT 170
           STALLLALPTNLAMAAIEALFQYRVVRAYIVVGR++
Sbjct: 226 STALLLALPTNLAMAAIEALFQYRVVRAYIVVGRVS 261

[Close]

BLAST of Cp4.1LG02g10460 vs. NCBI nr
Match: KAG7037123.1 (hypothetical protein SDJN02_00744, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 170 bits (430), Expect = 4.24e-44
Identity = 94/96 (97.92%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 75  FGFSSSTSFLWFSAAGAVLYSLVLANTMVISNLALVLSGMERLGGYFAILKACVLIRGKT 134
           FGFSSSTSFLWFSAAGAVLYSLVLANTMVISNLALVLSGMERLGGYFAILKACVLIRGKT
Sbjct: 166 FGFSSSTSFLWFSAAGAVLYSLVLANTMVISNLALVLSGMERLGGYFAILKACVLIRGKT 225

Query: 135 STALLLALPTNLAMAAIEALFQYRVVRAYIVVGRLT 170
           STALLLALPTNLAMAAIEALFQYRVVRAYIVVGR++
Sbjct: 226 STALLLALPTNLAMAAIEALFQYRVVRAYIVVGRVS 261

[Close]

BLAST of Cp4.1LG02g10460 vs. NCBI nr
Match: XP_023524540.1 (uncharacterized protein LOC111788436 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 170 bits (430), Expect = 4.35e-44
Identity = 94/96 (97.92%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 75  FGFSSSTSFLWFSAAGAVLYSLVLANTMVISNLALVLSGMERLGGYFAILKACVLIRGKT 134
           FGFSSSTSFLWFSAAGAVLYSLVLANTMVISNLALVLSGMERLGGYFAILKACVLIRGKT
Sbjct: 167 FGFSSSTSFLWFSAAGAVLYSLVLANTMVISNLALVLSGMERLGGYFAILKACVLIRGKT 226

Query: 135 STALLLALPTNLAMAAIEALFQYRVVRAYIVVGRLT 170
           STALLLALPTNLAMAAIEALFQYRVVRAYIVVGR++
Sbjct: 227 STALLLALPTNLAMAAIEALFQYRVVRAYIVVGRVS 262

[Close]

BLAST of Cp4.1LG02g10460 vs. NCBI nr
Match: XP_022997920.1 (uncharacterized protein LOC111492724 [Cucurbita maxima])

HSP 1 Score: 167 bits (424), Expect = 3.07e-43
Identity = 93/96 (96.88%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 75  FGFSSSTSFLWFSAAGAVLYSLVLANTMVISNLALVLSGMERLGGYFAILKACVLIRGKT 134
           FGFSSSTSFLWFSAAGAVLYSLVLANTMVISNLALVLSGMERLGGY AILKACVLIRGKT
Sbjct: 166 FGFSSSTSFLWFSAAGAVLYSLVLANTMVISNLALVLSGMERLGGYLAILKACVLIRGKT 225

Query: 135 STALLLALPTNLAMAAIEALFQYRVVRAYIVVGRLT 170
           STALLLALPTNLAMAAIEALFQYRVVRAYIVVGR++
Sbjct: 226 STALLLALPTNLAMAAIEALFQYRVVRAYIVVGRVS 261

[Close]

BLAST of Cp4.1LG02g10460 vs. NCBI nr
Match: XP_022137383.1 (uncharacterized protein LOC111008849 [Momordica charantia])

HSP 1 Score: 151 bits (381), Expect = 3.90e-37
Identity = 84/94 (89.36%), Postives = 90/94 (95.74%), Query Frame = 0


Query: 75  FGFSSSTSFLWFSAAGAVLYSLVLANTMVISNLALVLSGMERLGGYFAILKACVLIRGKT 134
           FGFSSSTSFL  S+AGAVLYS+VLANTMVI NLALVLSGME+LGGY AILKACVLIRG+T
Sbjct: 164 FGFSSSTSFLLLSSAGAVLYSVVLANTMVICNLALVLSGMEKLGGYLAILKACVLIRGRT 223

Query: 135 STALLLALPTNLAMAAIEALFQYRVVRAYIVVGR 168
           STALLLALPTNLAMAAIEALFQYRVVRAY++VGR
Sbjct: 224 STALLLALPTNLAMAAIEALFQYRVVRAYLLVGR 257

[Close]

BLAST of Cp4.1LG02g10460 vs. ExPASy TrEMBL
Match: A0A6J1KB84 (uncharacterized protein LOC111492724 OS=Cucurbita maxima OX=3661 GN=LOC111492724 PE=4 SV=1)

HSP 1 Score: 167 bits (424), Expect = 1.49e-43
Identity = 93/96 (96.88%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 75  FGFSSSTSFLWFSAAGAVLYSLVLANTMVISNLALVLSGMERLGGYFAILKACVLIRGKT 134
           FGFSSSTSFLWFSAAGAVLYSLVLANTMVISNLALVLSGMERLGGY AILKACVLIRGKT
Sbjct: 166 FGFSSSTSFLWFSAAGAVLYSLVLANTMVISNLALVLSGMERLGGYLAILKACVLIRGKT 225

Query: 135 STALLLALPTNLAMAAIEALFQYRVVRAYIVVGRLT 170
           STALLLALPTNLAMAAIEALFQYRVVRAYIVVGR++
Sbjct: 226 STALLLALPTNLAMAAIEALFQYRVVRAYIVVGRVS 261

[Close]

BLAST of Cp4.1LG02g10460 vs. ExPASy TrEMBL
Match: A0A6J1CA73 (uncharacterized protein LOC111008849 OS=Momordica charantia OX=3673 GN=LOC111008849 PE=4 SV=1)

HSP 1 Score: 151 bits (381), Expect = 1.89e-37
Identity = 84/94 (89.36%), Postives = 90/94 (95.74%), Query Frame = 0


Query: 75  FGFSSSTSFLWFSAAGAVLYSLVLANTMVISNLALVLSGMERLGGYFAILKACVLIRGKT 134
           FGFSSSTSFL  S+AGAVLYS+VLANTMVI NLALVLSGME+LGGY AILKACVLIRG+T
Sbjct: 164 FGFSSSTSFLLLSSAGAVLYSVVLANTMVICNLALVLSGMEKLGGYLAILKACVLIRGRT 223

Query: 135 STALLLALPTNLAMAAIEALFQYRVVRAYIVVGR 168
           STALLLALPTNLAMAAIEALFQYRVVRAY++VGR
Sbjct: 224 STALLLALPTNLAMAAIEALFQYRVVRAYLLVGR 257

[Close]

BLAST of Cp4.1LG02g10460 vs. ExPASy TrEMBL
Match: A0A1S3BBR5 (uncharacterized protein LOC103488179 OS=Cucumis melo OX=3656 GN=LOC103488179 PE=4 SV=1)

HSP 1 Score: 148 bits (373), Expect = 2.21e-36
Identity = 83/96 (86.46%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 75  FGFSSSTSFLWFSAAGAVLYSLVLANTMVISNLALVLSGMERLGGYFAILKACVLIRGKT 134
           FGFSSST+FL+ SAAGAVLYS+VLANT+VISNL+LVLSGME+LGGY AILKACV+IRGKT
Sbjct: 161 FGFSSSTNFLYLSAAGAVLYSIVLANTLVISNLSLVLSGMEKLGGYLAILKACVVIRGKT 220

Query: 135 STALLLALPTNLAMAAIEALFQYRVVRAYIVVGRLT 170
           STALLLALPTNLAMAAIEALFQYRVVRAY  VG L+
Sbjct: 221 STALLLALPTNLAMAAIEALFQYRVVRAYNGVGILS 256

[Close]

BLAST of Cp4.1LG02g10460 vs. ExPASy TrEMBL
Match: A0A0A0LTF3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G038890 PE=4 SV=1)

HSP 1 Score: 147 bits (371), Expect = 4.22e-36
Identity = 83/96 (86.46%), Postives = 90/96 (93.75%), Query Frame = 0


Query: 75  FGFSSSTSFLWFSAAGAVLYSLVLANTMVISNLALVLSGMERLGGYFAILKACVLIRGKT 134
           FGFSSST FL+ SAAGAVLYS+VLANT+VISNL+LVLSGME+LGGY AILKACV+IRGKT
Sbjct: 161 FGFSSSTHFLYLSAAGAVLYSIVLANTLVISNLSLVLSGMEKLGGYLAILKACVVIRGKT 220

Query: 135 STALLLALPTNLAMAAIEALFQYRVVRAYIVVGRLT 170
           STALLLALPTNLAMAAIEALFQYRVVRAY  VG L+
Sbjct: 221 STALLLALPTNLAMAAIEALFQYRVVRAYNGVGILS 256

[Close]

BLAST of Cp4.1LG02g10460 vs. ExPASy TrEMBL
Match: A0A6J1E8C5 (uncharacterized protein LOC111431556 OS=Cucurbita moschata OX=3662 GN=LOC111431556 PE=4 SV=1)

HSP 1 Score: 146 bits (369), Expect = 1.38e-35
Identity = 84/95 (88.42%), Postives = 87/95 (91.58%), Query Frame = 0


Query: 75  FGFSSSTSFLWFSAAGAVLYSLVLANTMVISNLALVLSGMERLGGYFAILKACVLIRGKT 134
           FG SSSTSF++ SAAGAVLYS+VLANT VISNLALVLSGMERLGGY  ILKACVLIRGKT
Sbjct: 168 FGLSSSTSFVFLSAAGAVLYSIVLANTWVISNLALVLSGMERLGGYLPILKACVLIRGKT 227

Query: 135 STALLLALPTNLAMAAIEALFQYRVVRAYIVVGRL 169
           STALLLALP NLAMAAIEALFQYRVVRAY  VGRL
Sbjct: 228 STALLLALPANLAMAAIEALFQYRVVRAYNGVGRL 262

[Close]

BLAST of Cp4.1LG02g10460 vs. TAIR 10
Match: AT5G61340.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G26650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 100.1 bits (248), Expect = 5.6e-21
Identity = 53/89 (59.55%), Postives = 68/89 (76.40%), Query Frame = 0


Query: 75  FGFSSSTSFLWFSAAGAVLYSLVLANTMVISNLALVLSGMERLGGYFAILKACVLIRGKT 134
           FGFSS   + + S + A++YS+++AN  VISNLALV S     GGY  ILKAC+LIRG+ 
Sbjct: 158 FGFSSRNFYTFLSLSSAIIYSIIIANAFVISNLALVSSPSSSSGGYTNILKACLLIRGRN 217

Query: 135 STALLLALPTNLAMAAIEALFQYRVVRAY 164
           STA+ LALPTNL +A +EALFQYRV+R+Y
Sbjct: 218 STAMALALPTNLGLAGVEALFQYRVMRSY 246

[Close]

BLAST of Cp4.1LG02g10460 vs. TAIR 10
Match: AT1G26650.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G69430.1); Has 205 Blast hits to 204 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 1.1e-05
Identity = 30/78 (38.46%), Postives = 50/78 (64.10%), Query Frame = 0


Query: 86  FSAAGAVL----YSLVLANTMVISNLALVLSGMERLGGYFAILKACVLIRGKTSTALLLA 145
           F+  GA+L    +S+V AN ++I N A+V+S +E + G  A+++A  LI+G+    LL+ 
Sbjct: 192 FNVYGAMLVGLAFSVVFANAIIICNTAIVISVLEDVSGLGALMRASDLIKGQIQVGLLMF 251

Query: 146 LPTNLAMAAIEALFQYRV 160
           L + L +A +E LF +RV
Sbjct: 252 LGSTLGLAFVEGLFDHRV 269

[Close]

BLAST of Cp4.1LG02g10460 vs. TAIR 10
Match: AT1G69430.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G26650.1); Has 216 Blast hits to 215 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 216; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 1.1e-05
Identity = 29/78 (37.18%), Postives = 51/78 (65.38%), Query Frame = 0


Query: 86  FSAAGAVL----YSLVLANTMVISNLALVLSGMERLGGYFAILKACVLIRGKTSTALLLA 145
           F+A GA+L    +S+V AN ++I N  +V+S +E + G  A+++A  LI+G+T   LL+ 
Sbjct: 208 FNAYGAILVGLVFSVVFANAIIICNTTIVISILEDVSGPGALVRASDLIKGQTQVGLLIF 267

Query: 146 LPTNLAMAAIEALFQYRV 160
           L + + +  +E LF++RV
Sbjct: 268 LGSTIGLTFVEGLFEHRV 285

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g10460 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG02g10460 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607466.1	4.24e-44	97.92	hypothetical protein SDJN03_00808, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7037123.1	4.24e-44	97.92	hypothetical protein SDJN02_00744, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023524540.1	4.35e-44	97.92	uncharacterized protein LOC111788436 [Cucurbita pepo subsp. pepo]	[more]
XP_022997920.1	3.07e-43	96.88	uncharacterized protein LOC111492724 [Cucurbita maxima]	[more]
XP_022137383.1	3.90e-37	89.36	uncharacterized protein LOC111008849 [Momordica charantia]	[more]

BLAST of Cp4.1LG02g10460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KB84	1.49e-43	96.88	uncharacterized protein LOC111492724 OS=Cucurbita maxima OX=3661 GN=LOC111492724...	[more]
A0A6J1CA73	1.89e-37	89.36	uncharacterized protein LOC111008849 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A1S3BBR5	2.21e-36	86.46	uncharacterized protein LOC103488179 OS=Cucumis melo OX=3656 GN=LOC103488179 PE=...	[more]
A0A0A0LTF3	4.22e-36	86.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G038890 PE=4 SV=1	[more]
A0A6J1E8C5	1.38e-35	88.42	uncharacterized protein LOC111431556 OS=Cucurbita moschata OX=3662 GN=LOC1114315...	[more]

BLAST of Cp4.1LG02g10460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61340.1	5.6e-21	59.55	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G26650.1	1.1e-05	38.46	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G69430.1	1.1e-05	37.18	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 309..324
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 292..324
None	No IPR available	PANTHER	PTHR33133:SF3	TRANSMEMBRANE PROTEIN	coord: 73..165
None	No IPR available	PANTHER	PTHR33133	OS08G0107100 PROTEIN-RELATED	coord: 73..165

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g10460.1	Cp4.1LG02g10460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane