Cp4.1LG02g10260 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGTTGTGGGATGTATGTAAAAGTTGAATTAACATTTAGTTGGAGATGGGAAGAGGAGGAGAAGATGTCGAGCGGGGGTACTGGTAGAGTTGAAATCCATGGACTTCAACAAACCTGGTCTGAATTCTCAAGGAACCCACAGCTTTCATCTTCTTCCCCTCCCGGAAAACCCTCAATTTCGCAATTAGGGCACAACATTCTTCGTTCTCTTCTGTACAATCAGATTTTGAATTCCGTCGTCGCATTGATTTTCTTTGCTCTCCGATCACTATTCTTCACGGGAACATCACTCTCGGTCTCTGCCGCCTACCAATCGTTTTCTGTAATCCCTTCACCTGCTTAGAATCAGATTATATTGTTCTTCTGTGCTATATCGAAGATGGCTAACATTGATTTCCATTTTAACATTTCTTCCAATGTTGGGATCATATTTGTTTTTCAATTTCAGGTCTGAGGCTGAAGTGATATAGTGGATTAACTTGGAATATGATTTTGGTGTGTTTTCCAATCTGATTCTGATGCTTATCTAGTGACTGACTGGTATATCGTCTCACCCTGGATTCCTTGAGCTTTGAATAACCTGAAATCTATTTAAACTTTTAGTTTCTTGTTATAAATATGATGCAAGTTTCTATTTACTTGAAAATAAGGAAGTGTCACACTGGAAACCAGTTGCAAATCCATGAATTTCTAGGGAGATTGACGAAATTCCTGGTGTTAAATCCTATGGCTAGGCTAACATTTTTATTTTCATAAGGCACTGTGAGTATTAGTTCTGAAGTTGTTCCTTTTTTTAAATATTGTATTCTTCTTTCAGGAAAGTGTGTATTGCCTTCCACGTTCATTTCATAATGTGGTTCTTATATAATACATTTTGAACTTGACTTGTAGAAGATATAAATGCAAACAGAAGTCTTTAACCTTTTGATGCACATGCTTCGTTGTGATGCAGGGAGTTTTGCTAGTAGGAGAAGAAAAGGGACGTGACTATTAAGTATTTGGCTTTCCAATGACGATCTATCAAACAAGAAACATTGGGCATCCTTTGATCAATCTTGTGAGATTGAAAGGCTTTCCTATTCTGCGGCAACTACAATTGGAAGAGCGCCTACTTCGAAACTCATCAGATAATTGGTGTATCATAAATGACGGAACAGACAATCCAGCTATTGTGATGGGCGTTTCTGGGTACTTACTTTACATGCACTTCTATTTCGAAATAATACACTGTCACTACAAGTTGGAATGCGGTTTACAATTTAACCAAGTTTCATTTTCATTTTGGTGTTCCCTCTCTAAATTTTTTTTCTTTTCAATACGCCTCTTTATGGTCCGCACAAATTGGGTATCATTTCGTACTTACCTTTTGAAGGTGCATGGTTAGAACTTTGTTGTATCCTTTTGCCAAATCATTGGAAAGTTTGTTTTTATAAGCAAAATGCCATCTTTGTGAACTTTTCTGAATGTAGAAGAGTTGCTCTTTCAATTCCTTGAACTGGCTGTATTGTTCAGGTAGAGAGAAACTAATTGAACTTTTATGTAATAAGTAATAAAGTCTCTTTTACATGGATTAGGAGCAAATTTGTGATAGTATACTTGACNGAAGTCTGCTTTTACATGGATTAGGAGCAAATTTGTGATAGTATACTTGACTAGCAATTTGGATGGTTGTGTTTAGTACTGAACAGNACTAGCAATTTGGATGGTTGTGTTTAGTACTGAACAGTCGGTACCCCAACTTCAGGGTCTTCTGCTCTCTTCTATTTGATTTGTGCATTAGTTAATTCATTCTGAAGATTATTGAAATCTGCACAGGAAACCTGATGAGCTCCTTGACATCAAATCTGTGTTAGGAGATCAAATTCCAGTCATCAGAAGGTTCACTGGGGGTGGAACTGTTATTGTTGATCACAACACAGTGTTTGTCACCTTCATATGTAATAAAGATGCCGTAGCCGGACTAAAACCGTTTCCTCAACCTATCATGTCCTGGAGTGGTCTATTATATAATAAAGTATTCCAAGGAACTGATTTTCATCTTCGGGAAAATGGTAGGTAGATTGAACTCTTTAGAATAGACGCCATCTCAACTTATTCATATAACTCTGCGTGCGTTCAGTTATGTATAAGATTAAACGTTTGGACGTTGACTATTGTTTTTTTCTGGATATAGATTATGTCTTTGGTAACCGTAAGTTTGGTGGAAATGCTCAGTCCATTACTAAAAGCCGGTGGATCCACCATACATCTTTTCTGTGGGACTATGAGGTTAGGAATATGGCATATCTGAGACATCCAAAACGGGTTCCTGATTACCGTGAGGTATACTTTATTGTTCATTGCATTTTTTTTTCTTTCCAAACTGGTTGCATATTTTATATACTCGTTTTTCCAATTCTGAGCCACACTATAGCAATTCAAGATGCAAGTATATTTAACAGGTCCAAGAAAAATATTTAATTCTCTTTTTTATTCTTATTAATCATATTATCTCCCCGTTAGTTCATCCAAAATATTAAGCTATGACCTTTGATATTATTGTGAACTTCCTTGATAATTGCCATATCTAGGTCTCCTAAGATCATCTTGAGGTTGCAATTAGGAATATCCACGTCTTGGGTTGAGTTAAAAATGTTTGGGACTCAATCCAAATGTTGAGTTAGCATATTTGTCCAACCATAATGAGACCCAAGTTAGGTGGTGCCCAACCCAACATGAACCTTATACTAGTTTGATTGAACTTGTTATGGCTATTCATCTTTTAAAAAAAACGTGTGAAAGAACTTTGAAAATGATAGAGCGGTGGCTAATTAGCCAGTCACACATTGGCTAAGTAGCTGTATGTTCTGTGTGAATGGTTAGTAAGCTCACCTAAAGCAATGTCGTTTGACAGCCGTTGCAGTGATGGTAGACCGTGTAGCTTTTCACTCCAAGGCTGTCAAAATGCATTTCTTCAAAACCATGTTGGGATAATGAAAAAGATAGCATTTAAGGATTCAGTGACCTAGTTTCACACCCTGAACCTGAATTTAATATAACAAATAGTTCAACATGCTATTTTATTTTATGAAAAACAACTCGGATATTCTAAAGACTTGAAGCAATTATTTTCTATAAGTTGTAAAGGGAAATAAACCTTATAATAGAGTTATTTGGTAACCAATATGATTTGGCCCTATGATCAATTAAGGCCGATGTAAATGAGTTCAAACCATCATGGCCACGTAACTAAATATCCTAAGAGTTTCTTTGGCAATCAAAGGTAGTAGTGGTCAGACGGTTGTCCTATAAGATTAGTCAAGATGCATACAAGCTCATTTAGATACTCACAGATATTGTGCAACCCAAACTAACTTTAGAAGAAAACCATGATCCCAAGTCTTTCTACCATCTTTCCGAGATCTCTAATGAAGCTTGTAACCTTACCCTAGTCATTTTGGTTGATTTGTTTGGGTCCCTCGGACCATCACCCTAGTGGCAATATAGATTGGAGCAAGTTGAAAATTAAAACGCATATTAACATGACATTCATTTATTATTTGATATTTTGACATGGTTAATAATGTTATACACAGATGCTGCCCTAATTTGGCAAATGAATGTATGGATGAAGTAACAATGTGTTCAATACTGACAGAGATCCTTTTTTAATGCCTTNAACACAGATGCTGCCCTAATTTGGTAAATGAATGTATGGATGAAGCAACAATGTGTTCAATACTGACAGAGATCCTTTTTTAATGCCTTTGGTTTTCTGAATTATATTTGTGCTAATTCTGAAAGAAAAAAAAGTATATATTTGCACAAAATGCAAACATTCAAGCTTACTAACATTTATATGTGCTTAAAATTTCTATTCAGGCAAGGAGCCATTTGGATTTTATATGTAGCTTGAAGGACTACATGCCAAGACAGGTATTTATTGATAAAACAACAGAAGCAATCGAAACTCAGTTTGGCACGAGTTTAAAGCAATTAGAAGAATGTGAATATTCTTCGACTGGAAACTGTAGTCCCACAACTAAGGTGCTGACAGAGCAAGAGTTGGAAACAGCTGCAGGTTGTGTATCACAGGGTAATAAGCTCGAGAAGGTCTTGGGCATAGCATTATGATAAGTAATTTATAAAATAATCATGGTATGATTATATACCATATACCCCTCATTTATTCTTTAGGCGGGGAATATTCTTGTTCTTGATGTTGAGATTGAATTAGCATAGCATGCCCACTGCCTAATTCTAGTCACAGTGCACTGTTAGCAAACCTCGAGGCATATTGTAGATGGTCCAGATGGTGGTTTTGCCTCTTCCTGCAAAAAGGCCTTTGGCTCTAGACCTCTGTTTCCAGACTAATTTTGGTGTCTCAAATACTAACCGCGAGGGTTGTCTATCCTTAAAGTTTGGCTTGACTAAAAAGATTTATGGCTCTATTTGAGTCTGGCTGCAGTGAAAAGAATAAATATATTTTTGTTGTGTGATAGTAGTTATACATACATATCAATCATTGCCCCTTCAGATGTTATTTGAAAGTGATATGAGATCAGCTGTAATT AGTTGTGGGATGTATGTAAAAGTTGAATTAACATTTAGTTGGAGATGGGAAGAGGAGGAGAAGATGTCGAGCGGGGGTACTGGTAGAGTTGAAATCCATGGACTTCAACAAACCTGGTCTGAATTCTCAAGGAACCCACAGCTTTCATCTTCTTCCCCTCCCGGAAAACCCTCAATTTCGCAATTAGGGCACAACATTCTTCGTTCTCTTCTGTACAATCAGATTTTGAATTCCGTCGTCGCATTGATTTTCTTTGCTCTCCGATCACTATTCTTCACGGGAACATCACTCTCGGTCTCTGCCGCCTACCAATCGTTTTCTGTCTGAGGCTGAAGTGATATAGTGGATTAACTTGGAATATGATTTTGGTGTGTTTTCCAATCTGATTCTGATGCTTATCTAGTGACTGACTGGGAGTTTTGCTAGTAGGAGAAGAAAAGGGACGTGACTATTAAGTATTTGGCTTTCCAATGACGATCTATCAAACAAGAAACATTGGGCATCCTTTGATCAATCTTGTGAGATTGAAAGGCTTTCCTATTCTGCGGCAACTACAATTGGAAGAGCGCCTACTTCGAAACTCATCAGATAATTGGTGTATCATAAATGACGGAACAGACAATCCAGCTATTGTGATGGGCGTTTCTGGGAAACCTGATGAGCTCCTTGACATCAAATCTGTGTTAGGAGATCAAATTCCAGTCATCAGAAGGTTCACTGGGGGTGGAACTGTTATTGTTGATCACAACACAGTGTTTGTCACCTTCATATGTAATAAAGATGCCGTAGCCGGACTAAAACCGTTTCCTCAACCTATCATGTCCTGGAGTGGTCTATTATATAATAAAGTATTCCAAGGAACTGATTTTCATCTTCGGGAAAATGATTATGTCTTTGGTAACCGTAAGTTTGGTGGAAATGCTCAGTCCATTACTAAAAGCCGGTGGATCCACCATACATCTTTTCTGTGGGACTATGAGGTTAGGAATATGGCATATCTGAGACATCCAAAACGGGTTCCTGATTACCGTGAGGCAAGGAGCCATTTGGATTTTATATGTAGCTTGAAGGACTACATGCCAAGACAGGTATTTATTGATAAAACAACAGAAGCAATCGAAACTCAGTTTGGCACGAGTTTAAAGCAATTAGAAGAATGTGAATATTCTTCGACTGGAAACTGTAGTCCCACAACTAAGGTGCTGACAGAGCAAGAGTTGGAAACAGCTGCAGGTTGTGTATCACAGGGTAATAAGCTCGAGAAGGTCTTGGGCATAGCATTATGATAAGTAATTTATAAAATAATCATGGTATGATTATATACCATATACCCCTCATTTATTCTTTAGGCGGGGAATATTCTTGTTCTTGATGTTGAGATTGAATTAGCATAGCATGCCCACTGCCTAATTCTAGTCACAGTGCACTGTTAGCAAACCTCGAGGCATATTGTAGATGGTCCAGATGGTGGTTTTGCCTCTTCCTGCAAAAAGGCCTTTGGCTCTAGACCTCTGTTTCCAGACTAATTTTGGTGTCTCAAATACTAACCGCGAGGGTTGTCTATCCTTAAAGTTTGGCTTGACTAAAAAGATTTATGGCTCTATTTGAGTCTGGCTGCAGTGAAAAGAATAAATATATTTTTGTTGTGTGATAGTAGTTATACATACATATCAATCATTGCCCCTTCAGATGTTATTTGAAAGTGATATGAGATCAGCTGTAATT ATGACGATCTATCAAACAAGAAACATTGGGCATCCTTTGATCAATCTTGTGAGATTGAAAGGCTTTCCTATTCTGCGGCAACTACAATTGGAAGAGCGCCTACTTCGAAACTCATCAGATAATTGGTGTATCATAAATGACGGAACAGACAATCCAGCTATTGTGATGGGCGTTTCTGGGAAACCTGATGAGCTCCTTGACATCAAATCTGTGTTAGGAGATCAAATTCCAGTCATCAGAAGGTTCACTGGGGGTGGAACTGTTATTGTTGATCACAACACAGTGTTTGTCACCTTCATATGTAATAAAGATGCCGTAGCCGGACTAAAACCGTTTCCTCAACCTATCATGTCCTGGAGTGGTCTATTATATAATAAAGTATTCCAAGGAACTGATTTTCATCTTCGGGAAAATGATTATGTCTTTGGTAACCGTAAGTTTGGTGGAAATGCTCAGTCCATTACTAAAAGCCGGTGGATCCACCATACATCTTTTCTGTGGGACTATGAGGTTAGGAATATGGCATATCTGAGACATCCAAAACGGGTTCCTGATTACCGTGAGGCAAGGAGCCATTTGGATTTTATATGTAGCTTGAAGGACTACATGCCAAGACAGGTATTTATTGATAAAACAACAGAAGCAATCGAAACTCAGTTTGGCACGAGTTTAAAGCAATTAGAAGAATGTGAATATTCTTCGACTGGAAACTGTAGTCCCACAACTAAGGTGCTGACAGAGCAAGAGTTGGAAACAGCTGCAGGTTGTGTATCACAGGGTAATAAGCTCGAGAAGGTCTTGGGCATAGCATTATGA MTIYQTRNIGHPLINLVRLKGFPILRQLQLEERLLRNSSDNWCIINDGTDNPAIVMGVSGKPDELLDIKSVLGDQIPVIRRFTGGGTVIVDHNTVFVTFICNKDAVAGLKPFPQPIMSWSGLLYNKVFQGTDFHLRENDYVFGNRKFGGNAQSITKSRWIHHTSFLWDYEVRNMAYLRHPKRVPDYREARSHLDFICSLKDYMPRQVFIDKTTEAIETQFGTSLKQLEECEYSSTGNCSPTTKVLTEQELETAAGCVSQGNKLEKVLGIAL Homology
BLAST of Cp4.1LG02g10260 vs. ExPASy Swiss-Prot
Match: O07608 (Lipoate-protein ligase LplJ OS=Bacillus subtilis (strain 168) OX=224308 GN=lplJ PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.0e-07 Identity = 47/171 (27.49%), Postives = 74/171 (43.27%), Query Frame = 0
BLAST of Cp4.1LG02g10260 vs. ExPASy Swiss-Prot
Match: O13629 (Putative lipoate-protein ligase A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=aim22 PE=3 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 3.8e-07 Identity = 40/155 (25.81%), Postives = 79/155 (50.97%), Query Frame = 0
BLAST of Cp4.1LG02g10260 vs. ExPASy Swiss-Prot
Match: P47512 (Probable lipoate-protein ligase A OS=Mycoplasma genitalium (strain ATCC 33530 / G-37 / NCTC 10195) OX=243273 GN=lplA PE=3 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.1e-06 Identity = 41/152 (26.97%), Postives = 70/152 (46.05%), Query Frame = 0
BLAST of Cp4.1LG02g10260 vs. ExPASy Swiss-Prot
Match: A0A0H3JR16 (Lipoate--protein ligase 1 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=SAV1028 PE=1 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 8.0e-05 Identity = 42/169 (24.85%), Postives = 67/169 (39.64%), Query Frame = 0
BLAST of Cp4.1LG02g10260 vs. ExPASy Swiss-Prot
Match: A6ZPT1 (Putative lipoate-protein ligase A OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=AIM22 PE=3 SV=2) HSP 1 Score: 48.1 bits (113), Expect = 1.8e-04 Identity = 49/203 (24.14%), Postives = 86/203 (42.36%), Query Frame = 0
BLAST of Cp4.1LG02g10260 vs. NCBI nr
Match: XP_023525841.1 (uncharacterized protein LOC111789340 [Cucurbita pepo subsp. pepo] >XP_023525843.1 uncharacterized protein LOC111789340 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 558 bits (1439), Expect = 6.64e-201 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g10260 vs. NCBI nr
Match: XP_022949490.1 (uncharacterized protein LOC111452820 [Cucurbita moschata] >XP_022949491.1 uncharacterized protein LOC111452820 [Cucurbita moschata]) HSP 1 Score: 551 bits (1421), Expect = 3.69e-198 Identity = 268/271 (98.89%), Postives = 268/271 (98.89%), Query Frame = 0
BLAST of Cp4.1LG02g10260 vs. NCBI nr
Match: KAG7037110.1 (lplJ, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 551 bits (1420), Expect = 5.24e-198 Identity = 267/271 (98.52%), Postives = 268/271 (98.89%), Query Frame = 0
BLAST of Cp4.1LG02g10260 vs. NCBI nr
Match: XP_022998800.1 (uncharacterized protein LOC111493356 [Cucurbita maxima] >XP_022998801.1 uncharacterized protein LOC111493356 [Cucurbita maxima] >XP_022998802.1 uncharacterized protein LOC111493356 [Cucurbita maxima]) HSP 1 Score: 542 bits (1396), Expect = 2.39e-194 Identity = 263/271 (97.05%), Postives = 264/271 (97.42%), Query Frame = 0
BLAST of Cp4.1LG02g10260 vs. NCBI nr
Match: XP_008443042.1 (PREDICTED: lipoate-protein ligase LplJ [Cucumis melo] >XP_008443165.1 PREDICTED: lipoate-protein ligase LplJ [Cucumis melo]) HSP 1 Score: 513 bits (1321), Expect = 6.49e-183 Identity = 246/271 (90.77%), Postives = 261/271 (96.31%), Query Frame = 0
BLAST of Cp4.1LG02g10260 vs. ExPASy TrEMBL
Match: A0A6J1GC58 (uncharacterized protein LOC111452820 OS=Cucurbita moschata OX=3662 GN=LOC111452820 PE=4 SV=1) HSP 1 Score: 551 bits (1421), Expect = 1.79e-198 Identity = 268/271 (98.89%), Postives = 268/271 (98.89%), Query Frame = 0
BLAST of Cp4.1LG02g10260 vs. ExPASy TrEMBL
Match: A0A6J1K8Z4 (uncharacterized protein LOC111493356 OS=Cucurbita maxima OX=3661 GN=LOC111493356 PE=4 SV=1) HSP 1 Score: 542 bits (1396), Expect = 1.16e-194 Identity = 263/271 (97.05%), Postives = 264/271 (97.42%), Query Frame = 0
BLAST of Cp4.1LG02g10260 vs. ExPASy TrEMBL
Match: A0A1S3B7D4 (lipoate-protein ligase LplJ OS=Cucumis melo OX=3656 GN=LOC103486730 PE=4 SV=1) HSP 1 Score: 513 bits (1321), Expect = 3.14e-183 Identity = 246/271 (90.77%), Postives = 261/271 (96.31%), Query Frame = 0
BLAST of Cp4.1LG02g10260 vs. ExPASy TrEMBL
Match: A0A5A7SYE8 (Lipoate-protein ligase LplJ OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00950 PE=4 SV=1) HSP 1 Score: 513 bits (1321), Expect = 1.22e-182 Identity = 246/271 (90.77%), Postives = 261/271 (96.31%), Query Frame = 0
BLAST of Cp4.1LG02g10260 vs. ExPASy TrEMBL
Match: A0A0A0LSR7 (BPL/LPL catalytic domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G033280 PE=4 SV=1) HSP 1 Score: 508 bits (1308), Expect = 3.01e-181 Identity = 244/271 (90.04%), Postives = 260/271 (95.94%), Query Frame = 0
BLAST of Cp4.1LG02g10260 vs. TAIR 10
Match: AT3G29010.1 (Biotin/lipoate A/B protein ligase family ) HSP 1 Score: 327.4 bits (838), Expect = 1.1e-89 Identity = 152/254 (59.84%), Postives = 198/254 (77.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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