Cp4.1LG02g09970 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG02g09970
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionDNA polymerase epsilon subunit
LocationCp4.1LG02: 10018004 .. 10023374 (+)
RNA-Seq ExpressionCp4.1LG02g09970
SyntenyCp4.1LG02g09970
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGAATCTTGGAAGAATCAGACACAAAACCTAAAAGATTAGAAGAATGTTAGTTCAAAATTGTTAGGGTTTAGTGAAGCAATTTGATTTTCCCTCCAACGCAGGGAGTAAGAATGCAGATTGCCGCCAATCAATCCAACATTCTCAACTCCATCATCTTCTATTCATTTCAATTCCGCAGATTCCTGCACTGAAGATGGACGAATCCACTCTGAGGCGAAAGGTTCAGAGGAAATCAAAAATCAGAGGTTACAGCATCAAACTAGATGCTCTCGCAGAAATTGTTTCCTTTGCCTCTCGTTTCGATGGCTGCGAAGACGACGCCATAGATTTGGTTCTCGACCATCTTCATGACGAATCCTGTAATGCTATATNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTCTTTCATACTGTAGGTCATTTCATTCCTTCTCATGGACGATTTCGTCGTTTTTTTGCTACCATGGCAGTGCAATCTTCGATAATAGACAAGGATGCGGTGCATCGGGTTGTCAGTATTCTACTTGCAGCTGATGAAGCGGGAGAAGAATGTCCCGATACCAGTACTAGTACATCGGCTCTTTGCATCATTGACGCTTTTGATATCTCCAAGTTTCGTTATGATCCCATCAAGAAGATCTTCTACATGTATGTTTTCCCACCTTGTATATTTATCTGAGTAATTGGTGAACAATTGAAGAATGATAACCGCCAATTGGACTTTTGGGTAAACTCCCTGCAGAAAAGAGAGATGTGCATATAGTGGACTTCAACTGATAACTTGTTTAAAACATTTCTTTTCCATTTTAGGCACACAGGAAGCCTTCCAATTCATGGGGATGCTTCTGCTAAAGCTGCTTTGTATAGAGATAGGTTTCTCCTACTTTCCCAAAGGCTCTCCCGAGATCAGCATTTCTCAAAACCCGCTTTTGACACTGGCATGTCTCATTTTGGAAGCTGTGAGGTACTCCATTTCTCTTGATCTTGAACTTACCTTGGTACCCTCTGCAGTTAATCCTGAGTATTTACGGCAATTTCTTTTGTGATATGTTCCCCAGATTTCTCCTATTCAGTCTCTGGTGGGGCAAACTGGGAGGAAATGGGTTATGGGAGTGATCTCTCAGATGGAGGATGGTCACTTTTACTTGGAGGACCTTACTGCGTCTGTGGAAATTAATTTATCTAGTGCTATATCCTTTACAGACATCCTCTATAATTTGGAAAAATCTAAACTTGTTTGATATTTGAAGATGACTTGGTATTTGATTTTCTTTAACAATCAGCACAAGATAACTACAGGCCTGTTTACAGAGAACACCATCGTTGTAGCAGAAGGAGAGATGCTCGTGGAGGGCATTTTCAAGGTTTGTGACATGCGTTTGCATTTAGGTTTTTTTATAGAGAGCTGGTTGAATTTTTCCCAATNACAAAATCCATCAAATTTCACCACTTGTTTCCGAATCCCCAAACCGGTTTCTTCTCAATCTTAGGGGCCTCCAACCCTTTCTCCCCCAGAATCAACACTCCTTTTAAGCCTACCACTTCCTCTGTTTCCAAATGGCCCCTGGTTTTCCCTTCTTCTTTCTATATAATCATTTCTTATCCCTCTTCTTCTTTCAAACTTTGCCCCTTTTCTTCGCTTTTTCTCTACCAAGTTATCATGGGTTTATCTAGTAGGTAATGAAGATTAATGTGAATAATAAAATGCTTCGAAAAAATGCGATCAAGTTATGGTGGCCACTACCTAGAATTTAATATCTTATTAGTTACCATCACAACCAAATGTAGCAGAGGCATATGGTTGTCGAACTTGTTCATACTAGTTGGTTCTAACACTCATAAATATAAAAAAAAAAAGAAAAAAATGCTATTTTTTTCAACTGGTCGTCCAATGTTTCCTCTTGCTAATGTGTACTTTTAAGCTTGCTTTACGGGGTCTTCACAATTTCTGTTATTTTAAAATGCTTGGTTACATTAAAAAAAAACGTCTTTGCACATCATATATATGTTCTTTTAAACATAAACTTAAAAATTAGGACAGTTTAATCGGAAGGGGCTGGCCTTTTGTTCTTATAATGCACAGCTGGAAATAGCCTGAATTAAATTCCTTCTGGACTCAAATATTTTCCAAAGTTTGTACATGCTTATGAGAGGATCATCATACGAGGCTACGGTATGGGTTCTGTTTGGTCCTGATCAGAGTTTTACCTCTCAGTTATATTTCATGTAGTTCTCAATTGGCAAGTGCCGAATACCACCGTTTGTTTAGATAATTAATATTTCGTTAGGTATACCAGAACTTAAGGTTACACAAAGATTTGAAATCTTTTCTTAAACATATTTTTGATTCTTTGGGCAAATTCTGCTCACACTCTTCTCTGAAGGTTGAAATTTAGAACAAAACTGAAGGTGAAGGTGCAATTTTCCTTCCTTTATCCATGAGTACTACCTTCTAAAAGTTGAATTTGCTTGGGATTTTGTTCTTGTGATTTACTTTCTCACTTGCTAGCAAGCACAAGGATACCTATTGAAACTTTTTGGAAGATGTTTAGCACATGTTTCATAGTATATTTCAAATACCGTTCTTCATATTACTAACGTGCTGATTTTTTTGGGTGTATTTTGTTAAGGTTATTACCTGTGGATTTCCTCCATTAGAGGACAGGGACAAGTCTCTTAAATTGCTAGCAGGCCAGGACTTCTTTGGAGGTGGTTCTCTAACTAAAGAGGAGACTGTATCCCCTTTCTTTTACTCTGCTATGAAAAGGATCTTTTAATATGCATGCATTGGATTGATGTGCTTTTTTTGTTGATATTTTATTATACTGAATTTTGGCTATTAAAGTGGTGTACGCACATGCATCCCATGCAATCAACTTGTTGCCCTTGATCATCAATAGCTCAGGCTTGCAGATCTGGAAAAGAGAGCCGTTAATGATATGTTTGTCATACTCTCTGACATTTGGTTGGATAGTGAAGAGGTGAAGAATAACCTCTTTATATTTTACGTGCATTGTGTCTGTGAAGCTTGGTGCCTTAACAGAATTTGATCATGTGGTAGGCCATGGGAAAACTGGAGACAATTCTTGATGGGTTTGAGAATGTGGAAATCGTTCCTTCCTTGTTTGTTTTGATGGGGAATTTTTGTTCCCGTCCATGTAATCTTGCCTTCAATTCTTACTCAAGTCTCAGGTAAGTATTATCACAATTGTTTTCTGTATGTATTGGATGTTATTGACATGAGTTCAAGAGACATAATGAGTTAGTGTGTGCAGATTACAATTCGGTAAGCTAGGAAAAATGATAGCAGCTCGTCCACGGTTAAAAGAGCATAGCAAGTTTCTTTTTATTCCTGGTCCAGATGATGCAGGTTTGTGTAGTTACTTGTAAATAAGTTCCTCGCCTTCTGCTTAAATATACATGAGATTTTCTTAATTTTTCTTCCCATTGAATTTATAGGACCATCAACAGTTTTACCGAGGTGTGCTTTGCCAAAGTATTTAACCGAAGAGCTTCAGATGCACGTCCCAAATGCCATCTTCTCAAGTAACCCTTGCAGGTGAATACTTCGATTGATTGCTTATAAACCTAACGGTCTTCCTAGTCTTTCGCTGTGGTATGATTCTCCATGAGGGGTTTCACTTCTGCAGATAACATTAGAAATGAATCTCTTTTTCCCTTTGGCAAACTGAATTTTTGTTTAAACATTCGAAGGAAACAAATTAATTCTTACCTCCAAACTTGATAGTATCAATTTTCTTTCTAAATCTCTAGTTTCATCAAATTGTACCTTGTTGCAATTTTAATCTTAAACTTGAAAATGTACTGTAACTTTTACCCTCTAAATAGTTTTCATTTGAAAGATCATTAAAAGAGTTCAAATAATATTTTGGTTCTTGAACTTTCAAAATGTCCACTTTGGTCCCTATAGGTTCTTTTGTATTTTGACTTGATTAAAAACAACTTAACCAATTTCAGTGGAAATTATGTTATCTTTGGTGAATGACGTGCCCCTTTTACTCCATAGTGGTGGATAATTGTCATATTTGGATGCAGGGTTAGGTTCTACACCCAAGAAATTGTATTTTTCCGACAGGACCTACTTTACAGAATGCGTCGGTCCTGTCTCATACCACCATCTACAGAAGAAACAAGTGATCCTTTTGAACATGTGATTTTTCTTCCTTTTATATATCTGTTATTTTGTCTAGTTATTTGTTGTATATTAATTCTAGCTCTTTTAGATATTTATATGTGGAGGCCCTAAGGTTGTTTCATGATTCTCTTGCAGCTTGTTGCTACCATAACTCATCAAAGTCATCTCTGCCCTCTTCCTCTGGTTATTCAACCAATTATCTGGAATTATGACCACTGTCTTCATCTTTATCCTACTCCTCATGTGGTACTTACCTATATATATCTGAATCTAGCTAGTGTTTAAACGATCTACTTATCCACAAAATTGGATACCCTTTCTTTCATCATCTGGAAACAGATGATGAACAGTCACTGCATATAGATGATAATGTTCTGCTATCACTGAACTGCATTCATTGCATAAACTTTTATTTGGCTTGTGCAGATAGTTCTGGGGGATAGAAGTAAGCAACAAGCATTCAAATACACAGGAATCACTTGCTTCAATCCTGGTTCCTTCACCAATGACAGCACCTTTGTGGCATATCGTCCTTGCAATCAAGAAGTTGAATTATCTGCCTTGTAAATCACTGCAAAGTATAAGCCAGATTCAAAGCGGCCACTCCTTTATTAGGTATAACAACTCATATCAAATTTTGAAAGAGAGCTTATAACATCATTCTTCATCTTGGGAGTTGCATTGTGCAAATCAAGAATACCACTGGTTAGCTGATGATAAGATCTAATAGAAACTTGTTTGTAGAATCAATAGCCTTTAGATGTATAGTTGTAAATCTGAGAGTAGATATTCTTTTCTTCGACTTGTAACGGTGGATGGCATGGCGTAATGATCAACAACGAACCCAAAAGCTCCCATGATTGTTGTGTGTTTACATTACATGAAGAATGAAAAGGAGAGTTGAGTGAGACAGAAGTTGTAAACATCCAACTTCTACTTTTTCGAGTTCGGTTGCTGAACTGTGGAGCAGGTGGTTTAGTTTAGTTTAGTTGTTATCCGTTTTGAGAAGACTTGTCAAATGGTGGATAGGTCTGGTTGGTTAAGGCAATGCCCACACAATTCTTTCCTCCATGGAGGGAGAGAGCTCTAAGAACTCTTTATCTTTTTATTTATGATTTGTTGTTAAGAATGGTTGGAAGCATGACTTGTTTAGCTGAATATCGTATTGGAAAATGAAAGCAAACTGTAAGAATGTTTGTTTTTCCTTT

mRNA sequence

GAGAATCTTGGAAGAATCAGACACAAAACCTAAAAGATTAGAAGAATGTTAGTTCAAAATTGTTAGGGTTTAGTGAAGCAATTTGATTTTCCCTCCAACGCAGGGAGTAAGAATGCAGATTGCCGCCAATCAATCCAACATTCTCAACTCCATCATCTTCTATTCATTTCAATTCCGCAGATTCCTGCACTGAAGATGGACGAATCCACTCTGAGGCGAAAGGTTCAGAGGAAATCAAAAATCAGAGGTTACAGCATCAAACTAGATGCTCTCGCAGAAATTGTTTCCTTTGCCTCTCGTTTCGATGGCTGCGAAGACGACGCCATAGATTTGGTTCTCGACCATCTTCATGACGAATCCTTGCAATCTTCGATAATAGACAAGGATGCGGTGCATCGGGTTGTCAGTATTCTACTTGCAGCTGATGAAGCGGGAGAAGAATGTCCCGATACCAGTACTAGTACATCGGCTCTTTGCATCATTGACGCTTTTGATATCTCCAAGTTTCGTTATGATCCCATCAAGAAGATCTTCTACATGCACACAGGAAGCCTTCCAATTCATGGGGATGCTTCTGCTAAAGCTGCTTTGTATAGAGATAGGTTTCTCCTACTTTCCCAAAGGCTCTCCCGAGATCAGCATTTCTCAAAACCCGCTTTTGACACTGGCATGTCTCATTTTGGAAGCTGTGAGATTTCTCCTATTCAGTCTCTGGTGGGGCAAACTGGGAGGAAATGGGTTATGGGAGTGATCTCTCAGATGGAGGATGGTCACTTTTACTTGGAGGACCTTACTGCGTCTGTGGAAATTAATTTATCTAGTGCTATATCCTTTACAGACATCCTCTATAATTTGGAAAAATCTAAACTTCACAAGATAACTACAGGCCTGTTTACAGAGAACACCATCGTTGTAGCAGAAGGAGAGATGCTCGTGGAGGGCATTTTCAAGGTTATTACCTGTGGATTTCCTCCATTAGAGGACAGGGACAAGTCTCTTAAATTGCTAGCAGGCCAGGACTTCTTTGGAGGTGGTTCTCTAACTAAAGAGGAGACTCTCAGGCTTGCAGATCTGGAAAAGAGAGCCGTTAATGATATGTTTGTCATACTCTCTGACATTTGGTTGGATAGTGAAGAGGCCATGGGAAAACTGGAGACAATTCTTGATGGGTTTGAGAATGTGGAAATCGTTCCTTCCTTGTTTGTTTTGATGGGGAATTTTTGTTCCCGTCCATGTAATCTTGCCTTCAATTCTTACTCAAGTCTCAGATTACAATTCGGTAAGCTAGGAAAAATGATAGCAGCTCGTCCACGGTTAAAAGAGCATAGCAAGTTTCTTTTTATTCCTGGTCCAGATGATGCAGGACCATCAACAGTTTTACCGAGGTGTGCTTTGCCAAAGTATTTAACCGAAGAGCTTCAGATGCACGTCCCAAATGCCATCTTCTCAAGTAACCCTTGCAGGGTTAGGTTCTACACCCAAGAAATTGTATTTTTCCGACAGGACCTACTTTACAGAATGCGTCGGTCCTGTCTCATACCACCATCTACAGAAGAAACAAGTGATCCTTTTGAACATCTTGTTGCTACCATAACTCATCAAAGTCATCTCTGCCCTCTTCCTCTGGTTATTCAACCAATTATCTGGAATTATGACCACTGTCTTCATCTTTATCCTACTCCTCATGTGATAGTTCTGGGGGATAGAAGTAAGCAACAAGCATTCAAATACACAGGAATCACTTGCTTCAATCCTGGTTCCTTCACCAATGACAGCACCTTTGTGGCATATCGTCCTTGCAATCAAGAAGTTGAATTATCTGCCTTGTAAATCACTGCAAAGTATAAGCCAGATTCAAAGCGGCCACTCCTTTATTAGGTATAACAACTCATATCAAATTTTGAAAGAGAGCTTATAACATCATTCTTCATCTTGGGAGTTGCATTGTGCAAATCAAGAATACCACTGGTTAGCTGATGATAAGATCTAATAGAAACTTGTTTGTAGAATCAATAGCCTTTAGATGTATAGTTGTAAATCTGAGAGTAGATATTCTTTTCTTCGACTTGTAACGGTGGATGGCATGGCGTAATGATCAACAACGAACCCAAAAGCTCCCATGATTGTTGTGTGTTTACATTACATGAAGAATGAAAAGGAGAGTTGAGTGAGACAGAAGTTGTAAACATCCAACTTCTACTTTTTCGAGTTCGGTTGCTGAACTGTGGAGCAGGTGGTTTAGTTTAGTTTAGTTGTTATCCGTTTTGAGAAGACTTGTCAAATGGTGGATAGGTCTGGTTGGTTAAGGCAATGCCCACACAATTCTTTCCTCCATGGAGGGAGAGAGCTCTAAGAACTCTTTATCTTTTTATTTATGATTTGTTGTTAAGAATGGTTGGAAGCATGACTTGTTTAGCTGAATATCGTATTGGAAAATGAAAGCAAACTGTAAGAATGTTTGTTTTTCCTTT

Coding sequence (CDS)

ATGGACGAATCCACTCTGAGGCGAAAGGTTCAGAGGAAATCAAAAATCAGAGGTTACAGCATCAAACTAGATGCTCTCGCAGAAATTGTTTCCTTTGCCTCTCGTTTCGATGGCTGCGAAGACGACGCCATAGATTTGGTTCTCGACCATCTTCATGACGAATCCTTGCAATCTTCGATAATAGACAAGGATGCGGTGCATCGGGTTGTCAGTATTCTACTTGCAGCTGATGAAGCGGGAGAAGAATGTCCCGATACCAGTACTAGTACATCGGCTCTTTGCATCATTGACGCTTTTGATATCTCCAAGTTTCGTTATGATCCCATCAAGAAGATCTTCTACATGCACACAGGAAGCCTTCCAATTCATGGGGATGCTTCTGCTAAAGCTGCTTTGTATAGAGATAGGTTTCTCCTACTTTCCCAAAGGCTCTCCCGAGATCAGCATTTCTCAAAACCCGCTTTTGACACTGGCATGTCTCATTTTGGAAGCTGTGAGATTTCTCCTATTCAGTCTCTGGTGGGGCAAACTGGGAGGAAATGGGTTATGGGAGTGATCTCTCAGATGGAGGATGGTCACTTTTACTTGGAGGACCTTACTGCGTCTGTGGAAATTAATTTATCTAGTGCTATATCCTTTACAGACATCCTCTATAATTTGGAAAAATCTAAACTTCACAAGATAACTACAGGCCTGTTTACAGAGAACACCATCGTTGTAGCAGAAGGAGAGATGCTCGTGGAGGGCATTTTCAAGGTTATTACCTGTGGATTTCCTCCATTAGAGGACAGGGACAAGTCTCTTAAATTGCTAGCAGGCCAGGACTTCTTTGGAGGTGGTTCTCTAACTAAAGAGGAGACTCTCAGGCTTGCAGATCTGGAAAAGAGAGCCGTTAATGATATGTTTGTCATACTCTCTGACATTTGGTTGGATAGTGAAGAGGCCATGGGAAAACTGGAGACAATTCTTGATGGGTTTGAGAATGTGGAAATCGTTCCTTCCTTGTTTGTTTTGATGGGGAATTTTTGTTCCCGTCCATGTAATCTTGCCTTCAATTCTTACTCAAGTCTCAGATTACAATTCGGTAAGCTAGGAAAAATGATAGCAGCTCGTCCACGGTTAAAAGAGCATAGCAAGTTTCTTTTTATTCCTGGTCCAGATGATGCAGGACCATCAACAGTTTTACCGAGGTGTGCTTTGCCAAAGTATTTAACCGAAGAGCTTCAGATGCACGTCCCAAATGCCATCTTCTCAAGTAACCCTTGCAGGGTTAGGTTCTACACCCAAGAAATTGTATTTTTCCGACAGGACCTACTTTACAGAATGCGTCGGTCCTGTCTCATACCACCATCTACAGAAGAAACAAGTGATCCTTTTGAACATCTTGTTGCTACCATAACTCATCAAAGTCATCTCTGCCCTCTTCCTCTGGTTATTCAACCAATTATCTGGAATTATGACCACTGTCTTCATCTTTATCCTACTCCTCATGTGATAGTTCTGGGGGATAGAAGTAAGCAACAAGCATTCAAATACACAGGAATCACTTGCTTCAATCCTGGTTCCTTCACCAATGACAGCACCTTTGTGGCATATCGTCCTTGCAATCAAGAAGTTGAATTATCTGCCTTGTAA

Protein sequence

MDESTLRRKVQRKSKIRGYSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSSIIDKDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISKFRYDPIKKIFYMHTGSLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAISFTDILYNLEKSKLHKITTGLFTENTIVVAEGEMLVEGIFKVITCGFPPLEDRDKSLKLLAGQDFFGGGSLTKEETLRLADLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEIVPSLFVLMGNFCSRPCNLAFNSYSSLRLQFGKLGKMIAARPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
Homology
[Close]
BLAST of Cp4.1LG02g09970 vs. ExPASy Swiss-Prot
Match: Q500V9 (DNA polymerase epsilon subunit B OS=Arabidopsis thaliana OX=3702 GN=DPB2 PE=1 SV=1)

HSP 1 Score: 756.1 bits (1951), Expect = 2.7e-217
Identity = 378/542 (69.74%), Postives = 443/542 (81.73%), Query Frame = 0 

Query: 4   STLRRKVQRKSKIRGYSIKLDALAEIVSFASRF-DGCEDDAIDLVLDHLHDESLQSSIID 63
           S  R+K+Q+K K RGY++K DAL EI+ FA +F D  + +AIDL+LD+L  E+ +SS +D
Sbjct: 5   SQKRKKIQKKFKNRGYNLKFDALDEILVFADQFPDDDDGEAIDLLLDNL-QETHKSSTVD 64

Query: 64  KDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISKFRYDPIKKIFYMHTGSLPI 123
            ++V  +++ LL A  A EE    +TS S+L IIDAF + KF YD +KK F  HT SLPI
Sbjct: 65  AESVRGLINRLLGAHNAPEE---PTTSASSLAIIDAFLVPKFGYDSVKKKFNEHTSSLPI 124

Query: 124 HGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGSCEISPIQSLVGQTGRKWV 183
           HG+ASAK ALYR+RF+LLSQR+SR +HFS+PAFD  MS F + EIS IQSL+ Q GRKWV
Sbjct: 125 HGEASAKTALYRERFMLLSQRVSRAEHFSRPAFDAEMSQFENNEISSIQSLISQRGRKWV 184

Query: 184 MGVISQMEDGHFYLEDLTASVEINLSSAISFTDILYNLEKSKLHKITTGLFTENTIVVAE 243
           MGVISQ+EDGHFYLEDL+ASVEI+LS A                KITTG FTENTI++AE
Sbjct: 185 MGVISQLEDGHFYLEDLSASVEIDLSKA----------------KITTGFFTENTIILAE 244

Query: 244 GEMLVEGIFKVITCGFPPLEDRDKSLKLLAGQDFFGGGSLTKEETLRLADLEKRAVNDMF 303
           GEM V GIF+VITCGFPPLEDRDK+LK  +  DFFGGG+LTKEE ++LADLE++AVND F
Sbjct: 245 GEMQVNGIFQVITCGFPPLEDRDKTLKAHSEYDFFGGGTLTKEEMIKLADLERQAVNDTF 304

Query: 304 VILSDIWLDSEEAMGKLETILDGFENVEIVPSLFVLMGNFCSRPCNLAFNSYSSLRLQFG 363
           VILSDIWLD EE M KLET+LDGFE+VE VPSLFV MGNFCSRPCNL+F SYSSLR QFG
Sbjct: 305 VILSDIWLDDEEVMRKLETVLDGFESVETVPSLFVFMGNFCSRPCNLSFGSYSSLREQFG 364

Query: 364 KLGKMIAARPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPC 423
           KLG+MI   PRLKE+S+FLFIPGP+DAGPSTVLPRCALPKYLTEEL+  +PNAIFSSNPC
Sbjct: 365 KLGRMIGNHPRLKENSRFLFIPGPEDAGPSTVLPRCALPKYLTEELRNIIPNAIFSSNPC 424

Query: 424 RVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPI 483
           RV+FY QEIVFFRQDLLYRMRRSCL+ PS+EET+DPF+HLV TITHQSHLCPLPL++QPI
Sbjct: 425 RVKFYNQEIVFFRQDLLYRMRRSCLVTPSSEETNDPFKHLVYTITHQSHLCPLPLMVQPI 484

Query: 484 IWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELS 543
           IWNYDH L LYPTPH IVLGD+S+Q+  K+ G TCFNPGSF+ DSTFVAYRP  QEVELS
Sbjct: 485 IWNYDHALRLYPTPHTIVLGDKSEQEVCKFGGTTCFNPGSFSTDSTFVAYRPSTQEVELS 526

Query: 544 AL 545
           AL
Sbjct: 545 AL 526

[Close]
BLAST of Cp4.1LG02g09970 vs. ExPASy Swiss-Prot
Match: Q5ZKQ6 (DNA polymerase epsilon subunit 2 OS=Gallus gallus OX=9031 GN=POLE2 PE=2 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 8.9e-80
Identity = 187/560 (33.39%), Postives = 299/560 (53.39%), Query Frame = 0 

Query: 1   MDESTLRRKVQRKSKIRGYSIKLDALAEIVSFASRFDGCE-DDAIDLVLDHLHDESLQSS 60
           M+   LRR++    ++RG  ++ +A+  +       +  E +D ID ++D +  + L ++
Sbjct: 1   MEPERLRRRLGSAFRVRGLLLRAEAVKYLTETLESLNEEEFEDVIDKIIDAVEKQPLSTN 60

Query: 61  IIDKDAVHRVVSILLAADEAGEECPDT--STSTSALCIIDAFDISKFRYDPIKKIFY-MH 120
           +I+   V   V          +EC      T  +   II AFDI ++ Y+P +K F  + 
Sbjct: 61  MIELSTVEAAV----------QECSQALDETIKNVFNIIGAFDIPRYIYNPDRKRFVPLS 120

Query: 121 TGSLPI---HGDASAKAALYRDRFLLLSQRLSRDQHFSKPAF----DTGMSHFGSCEISP 180
             +LP+    G A  KA L+R+R+ +L QR  R + F+  A     D   S F   ++  
Sbjct: 121 MTNLPVPNLFGTARDKAELFRERYSILQQRTHRHELFTPAAVVIHPDDNRSKF---QLKT 180

Query: 181 IQSLVGQTGR---KWVMGVISQMEDGHFYLEDLTASVEINLSSAISFTDILYNLEKSKLH 240
           +++L+G T +     V+G+I+Q+++G ++LED T  V+++LS             K++ H
Sbjct: 181 VETLLGNTAKVREVIVLGMITQLKEGKYFLEDPTGVVQLDLS-------------KAQFH 240

Query: 241 KITTGLFTENTIVVAEGEMLVEGIFKVITCGFPPLEDRDKSLKLLAGQDFFGG-GSLTKE 300
              +GL+TE+  V+AEG    + +F V   GFPP E    +       +FFGG  S + +
Sbjct: 241 ---SGLYTESCFVLAEG-WYEDEVFHVNAFGFPPTEPSATTRAFYGNINFFGGPSSASVK 300

Query: 301 ETLRLADLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEIVPSLFVLMGNFCSR 360
            + +L  LE    + MFV LSD+WLD  E + KL T+  G+ +    P+ F   GNF S 
Sbjct: 301 ASAKLKQLEDENEDAMFVFLSDVWLDQAEVLEKLHTMFSGYSSAP--PTCFFFCGNFSSA 360

Query: 361 PCNLAFNSYSSLRLQFGKLGKMIAARPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLT 420
           P     N   SL+     L  +I   P + + S+F+F+PGP+D GP +VLPR  L + +T
Sbjct: 361 P--YGKNQIQSLKGSLKALADIICEYPSIHKSSRFVFVPGPEDPGPGSVLPRPPLAENIT 420

Query: 421 EELQMHVPNAIFSSNPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVAT 480
           +E +  VP ++F++NPCRV++ TQEI+ FR+DL+ +M R+C+  PS+  + D   H V T
Sbjct: 421 QEFRQLVPFSVFTTNPCRVQYCTQEIIIFREDLVNKMCRNCVRFPSS--SMDIPNHFVKT 480

Query: 481 ITHQSHLCPLPLVIQPIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTN 540
           I  Q HL PLPL + P+ W YD+ L +YP P ++V+ D+        T   C NPGSF  
Sbjct: 481 ILSQGHLTPLPLYVSPVYWAYDYALRVYPVPDMLVIADKYDPFTVTNTDCLCINPGSFPR 524

Query: 541 DS-TFVAYRPCNQEVELSAL 545
              +F  + P N+ VE S L
Sbjct: 541 SGFSFKVFYPSNKTVEDSKL 524

[Close]
BLAST of Cp4.1LG02g09970 vs. ExPASy Swiss-Prot
Match: Q54Y85 (DNA polymerase epsilon subunit 2 OS=Dictyostelium discoideum OX=44689 GN=pole2 PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 2.9e-78
Identity = 174/536 (32.46%), Postives = 284/536 (52.99%), Query Frame = 0 

Query: 7   RRKVQRKSKIRGYSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSSIIDKDAV 66
           ++++ +   + G+SIK DA+  I++            ID +L +L       +I   +  
Sbjct: 6   KKQITKSFSLTGFSIKADAMKCIINRIKNEGYDITQLIDNLLKNLDKSQYLQTI---EGC 65

Query: 67  HRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISKFRYDPIKKIFYMHTG-SLPIHGD 126
            +++  + ++D   +E         AL +IDAF+   F +D   K F         +HG 
Sbjct: 66  FKLIDTINSSDAIEKE---------ALKVIDAFNTPLFNFDSNSKQFIKSENFDRSLHGS 125

Query: 127 ASAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGSCEISPIQSLVGQTGRKWVMGV 186
           +++K+ LYR R+L + QR  R+ +FS P   +         I+P+ SL+G TGRK V+G 
Sbjct: 126 SNSKSDLYRKRYLKVLQRTERNDYFSTPVLASDKLKNEYQTITPLSSLLGNTGRKHVLGT 185

Query: 187 ISQMEDGHFYLEDLTASVEINLSSAISFTDILYNLEKSKLHKITTGLFTENTIVVAEGEM 246
           ISQ+E+  FY+EDL  +V+I++S A                K   G+ T N+I+ A GE 
Sbjct: 186 ISQIEEDQFYIEDLNTNVKIDISKA----------------KFEFGIVTINSIIQASGE- 245

Query: 247 LVEGIFKVITCGFPPLEDRDKSLKLLAGQDFFGGGSLTKEETLRLADLEKRAVNDMFVIL 306
            ++G+F       PP E+R ++LK L   D FG     K+   +L   EK   ++  + L
Sbjct: 246 FIDGVFIADKIQLPPTEERCETLKFLQNIDMFGERP-QKKTMEQLIKYEKEKEDNSILFL 305

Query: 307 SDIWLDSEEAMGKLETILDGFENVEIVPSLFVLMGNFCSRPCNLAFNSYSSLRLQFGKLG 366
           SD+WLDSE  M +L+ +  G++  +  P   +LMGNF   P  L   +   L+  F +L 
Sbjct: 306 SDVWLDSERVMERLDYLFGGYK--DCPPFAMILMGNFTEHP--LINGTQYQLKKYFNQLA 365

Query: 367 KMIAARPRLKEHSKFLFIPGPDDAGPS--TVLPRCALPKYLTEELQMHVPNAIFSSNPCR 426
            +I   P + + ++F+F+PGP D   S   +LP+  +     ++    +P + F++NPCR
Sbjct: 366 MVIQKYPNIHQFTQFIFVPGPTDPTGSLLNILPKFPISNVFIKDFISLIPKSTFTTNPCR 425

Query: 427 VRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPII 486
           +R+ +QEI+ FR DL  +MRR C++ PS  ++ D  +HL+  I   SHLC L L  +PI 
Sbjct: 426 IRYCSQEIIIFRDDLTNKMRRHCILEPS--QSCDISQHLIELICSNSHLCNLTLEDKPIY 485

Query: 487 WNYDHCLHLYPTPHVIVLGDRSKQ-QAFKYTGITCFNPGSFTNDSTFVAYRPCNQE 539
           WNYDH + +YP P ++V+GD+S Q +  +  G    NP SF+ D +F  Y P N++
Sbjct: 486 WNYDHAMSVYPLPDLLVIGDKSNQYEHSRADGTYSMNPSSFSTDYSFAHYIPANKQ 505

[Close]
BLAST of Cp4.1LG02g09970 vs. ExPASy Swiss-Prot
Match: A7YWS7 (DNA polymerase epsilon subunit 2 OS=Bos taurus OX=9913 GN=POLE2 PE=2 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 4.9e-78
Identity = 183/557 (32.85%), Postives = 292/557 (52.42%), Query Frame = 0 

Query: 1   MDESTLRRKVQRKSKIRGYSIKLDALAEIVSFASRFDGCE-DDAIDLVLDHLHDESLQSS 60
           M    LR +     K+RG  ++ +A+  +       +  E +DA++ ++D +  + L S+
Sbjct: 1   MAPERLRSRALSAFKLRGLMLRGEAVKYLTEALQSINEIELEDALEKIIDAVEKQPLSSN 60

Query: 61  IIDKDAVHRVVSILLAADEAGEECPDT--STSTSALCIIDAFDISKFRYDPIKKIF---Y 120
           +I++  V   V          +EC  +   T      II AFDI +F Y+  +K F    
Sbjct: 61  MIERSVVEAAV----------QECSQSVDETIDHIFNIIGAFDIPRFVYNSERKKFLPLL 120

Query: 121 MHTGSLP-IHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGS-CEISPIQS 180
           M     P + G A  KA L+R+R+ +L QR  R + F+ P   +     GS  ++  I++
Sbjct: 121 MTNHPAPNLFGTARDKAELFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIET 180

Query: 181 LVGQT---GRKWVMGVISQMEDGHFYLEDLTASVEINLSSAISFTDILYNLEKSKLHKIT 240
           L+G T   G   V+G+I+Q+++G F+LED T +++++LS             K++ H   
Sbjct: 181 LLGSTSKIGDVIVLGMITQLKEGKFFLEDPTGTIQLDLS-------------KAQFH--- 240

Query: 241 TGLFTENTIVVAEGEMLVEGIFKVITCGFPPLEDRDKSLKLLAGQDFFGGGSLTKEET-L 300
           +GL+TE+  V+AEG    + +F V   GFPP E    +       +FFGG S T  +T  
Sbjct: 241 SGLYTESCFVLAEG-WFEDQVFHVNAFGFPPTEPSSTTRAYYGNTNFFGGPSNTSVKTSA 300

Query: 301 RLADLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEIVPSLFVLMGNFCSRPCN 360
           +L  LE    + MFV +SD+WLD  E + KL  +  G+      P+ F+L GNF S P  
Sbjct: 301 KLKQLEDENKDAMFVFISDVWLDQVEVLEKLHIMFSGYSPAP--PTCFILCGNFSSAP-- 360

Query: 361 LAFNSYSSLRLQFGKLGKMIAARPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEEL 420
              N   +L+     L  +I   P + + S+F+F+PGP+D G  ++LPR    + +T E 
Sbjct: 361 YGKNQVQALKDSLKTLADIICGYPNIHQSSRFVFVPGPEDPGFGSILPRPPFAESITNEF 420

Query: 421 QMHVPNAIFSSNPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITH 480
           +  VP ++F++NPCR+++ TQEI+ FR+DL+ +M R+C+  PS+    D   H V T+  
Sbjct: 421 RQRVPFSVFTTNPCRIQYCTQEIIVFREDLVNKMCRNCVRFPSS--NLDIPNHFVKTVLS 480

Query: 481 QSHLCPLPLVIQPIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDS- 540
           Q HL PLPL + P+ W YD+ L +YP P ++V+ D+        T   C NPGSF     
Sbjct: 481 QGHLTPLPLYVCPVYWAYDYALRVYPVPDLLVIADKYDPFTLTNTECLCINPGSFPRSGF 524

Query: 541 TFVAYRPCNQEVELSAL 545
           +F  + P N+ VE S L
Sbjct: 541 SFKVFYPSNKVVEDSKL 524

[Close]
BLAST of Cp4.1LG02g09970 vs. ExPASy Swiss-Prot
Match: P56282 (DNA polymerase epsilon subunit 2 OS=Homo sapiens OX=9606 GN=POLE2 PE=1 SV=2)

HSP 1 Score: 284.6 bits (727), Expect = 2.3e-75
Identity = 182/557 (32.68%), Postives = 288/557 (51.71%), Query Frame = 0 

Query: 1   MDESTLRRKVQRKSKIRGYSIKLDALAEIVSFASRFDGCE-DDAIDLVLDHLHDESLQSS 60
           M    LR +     K+RG  ++ +A+  +          E +D ++ +++ +  + L S+
Sbjct: 1   MAPERLRSRALSAFKLRGLLLRGEAIKYLTEALQSISELELEDKLEKIINAVEKQPLSSN 60

Query: 61  IIDKDAVHRVVSILLAADEAGEECPDT--STSTSALCIIDAFDISKFRYDPIKKIF---Y 120
           +I++  V   V          +EC  +   T      II AFDI +F Y+  +K F    
Sbjct: 61  MIERSVVEAAV----------QECSQSVDETIEHVFNIIGAFDIPRFVYNSERKKFLPLL 120

Query: 121 MHTGSLP-IHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGS-CEISPIQS 180
           M     P + G    KA ++R+R+ +L QR  R + F+ P   +     GS  ++  I++
Sbjct: 121 MTNHPAPNLFGTPRDKAEMFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIET 180

Query: 181 LVGQT---GRKWVMGVISQMEDGHFYLEDLTASVEINLSSAISFTDILYNLEKSKLHKIT 240
           L+G T   G   V+G+I+Q+++G F+LED T +V+++LS             K++ H   
Sbjct: 181 LLGSTTKIGDAIVLGMITQLKEGKFFLEDPTGTVQLDLS-------------KAQFH--- 240

Query: 241 TGLFTENTIVVAEGEMLVEGIFKVITCGFPPLEDRDKSLKLLAGQDFFGGGSLTKEET-L 300
           +GL+TE   V+AEG    + +F V   GFPP E    +       +FFGG S T  +T  
Sbjct: 241 SGLYTEACFVLAEG-WFEDQVFHVNAFGFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSA 300

Query: 301 RLADLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEIVPSLFVLMGNFCSRPCN 360
           +L  LE+   + MFV LSD+WLD  E + KL  +  G+      P+ F+L GNF S P  
Sbjct: 301 KLKQLEEENKDAMFVFLSDVWLDQVEVLEKLRIMFAGYSPAP--PTCFILCGNFSSAP-- 360

Query: 361 LAFNSYSSLRLQFGKLGKMIAARPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEEL 420
              N   +L+     L  +I   P + + S+F+F+PGP+D G  ++LPR  L + +T E 
Sbjct: 361 YGKNQVQALKDSLKTLADIICEYPDIHQSSRFVFVPGPEDPGFGSILPRPPLAESITNEF 420

Query: 421 QMHVPNAIFSSNPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITH 480
           +  VP ++F++NPCR+++ TQEI  FR+DL+ +M R+C+  PS+        H V TI  
Sbjct: 421 RQRVPFSVFTTNPCRIQYCTQEITVFREDLVNKMCRNCVRFPSSNLAIP--NHFVKTILS 480

Query: 481 QSHLCPLPLVIQPIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDS- 540
           Q HL PLPL + P+ W YD+ L +YP P ++V+ D+        T   C NPGSF     
Sbjct: 481 QGHLTPLPLYVCPVYWAYDYALRVYPVPDLLVIADKYDPFTTTNTECLCINPGSFPRSGF 524

Query: 541 TFVAYRPCNQEVELSAL 545
           +F  + P N+ VE S L
Sbjct: 541 SFKVFYPSNKTVEDSKL 524

[Close]
BLAST of Cp4.1LG02g09970 vs. NCBI nr
Match: XP_023525784.1 (DNA polymerase epsilon subunit B [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1052 bits (2721), Expect = 0.0
Identity = 528/544 (97.06%), Postives = 528/544 (97.06%), Query Frame = 0 

Query: 1   MDESTLRRKVQRKSKIRGYSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSSI 60
           MDESTLRRKVQRKSKIRGYSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSSI
Sbjct: 1   MDESTLRRKVQRKSKIRGYSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSSI 60

Query: 61  IDKDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISKFRYDPIKKIFYMHTGSL 120
           IDKDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISKFRYDPIKKIFYMHTGSL
Sbjct: 61  IDKDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISKFRYDPIKKIFYMHTGSL 120

Query: 121 PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGSCEISPIQSLVGQTGRK 180
           PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGSCEISPIQSLVGQTGRK
Sbjct: 121 PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGSCEISPIQSLVGQTGRK 180

Query: 181 WVMGVISQMEDGHFYLEDLTASVEINLSSAISFTDILYNLEKSKLHKITTGLFTENTIVV 240
           WVMGVISQMEDGHFYLEDLTASVEINLSSA                KITTGLFTENTIVV
Sbjct: 181 WVMGVISQMEDGHFYLEDLTASVEINLSSA----------------KITTGLFTENTIVV 240

Query: 241 AEGEMLVEGIFKVITCGFPPLEDRDKSLKLLAGQDFFGGGSLTKEETLRLADLEKRAVND 300
           AEGEMLVEGIFKVITCGFPPLEDRDKSLKLLAGQDFFGGGSLTKEETLRLADLEKRAVND
Sbjct: 241 AEGEMLVEGIFKVITCGFPPLEDRDKSLKLLAGQDFFGGGSLTKEETLRLADLEKRAVND 300

Query: 301 MFVILSDIWLDSEEAMGKLETILDGFENVEIVPSLFVLMGNFCSRPCNLAFNSYSSLRLQ 360
           MFVILSDIWLDSEEAMGKLETILDGFENVEIVPSLFVLMGNFCSRPCNLAFNSYSSLRLQ
Sbjct: 301 MFVILSDIWLDSEEAMGKLETILDGFENVEIVPSLFVLMGNFCSRPCNLAFNSYSSLRLQ 360

Query: 361 FGKLGKMIAARPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSN 420
           FGKLGKMIAARPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSN
Sbjct: 361 FGKLGKMIAARPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSN 420

Query: 421 PCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQ 480
           PCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQ
Sbjct: 421 PCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQ 480

Query: 481 PIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVE 540
           PIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVE
Sbjct: 481 PIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVE 528

Query: 541 LSAL 544
           LSAL
Sbjct: 541 LSAL 528

[Close]
BLAST of Cp4.1LG02g09970 vs. NCBI nr
Match: XP_022949454.1 (DNA polymerase epsilon subunit B [Cucurbita moschata])

HSP 1 Score: 1048 bits (2710), Expect = 0.0
Identity = 525/544 (96.51%), Postives = 528/544 (97.06%), Query Frame = 0 

Query: 1   MDESTLRRKVQRKSKIRGYSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSSI 60
           MDESTLRRKVQRKSKIRGYSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSSI
Sbjct: 1   MDESTLRRKVQRKSKIRGYSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSSI 60

Query: 61  IDKDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISKFRYDPIKKIFYMHTGSL 120
           IDKDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISK+RYDPIKKIFYMHTGSL
Sbjct: 61  IDKDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISKYRYDPIKKIFYMHTGSL 120

Query: 121 PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGSCEISPIQSLVGQTGRK 180
           PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFD+GMSHFGSCEISPIQSLVGQTGRK
Sbjct: 121 PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDSGMSHFGSCEISPIQSLVGQTGRK 180

Query: 181 WVMGVISQMEDGHFYLEDLTASVEINLSSAISFTDILYNLEKSKLHKITTGLFTENTIVV 240
           WVMGVISQMEDGHF+LEDLTASVEINLSSA                KITTGLFTENTIVV
Sbjct: 181 WVMGVISQMEDGHFFLEDLTASVEINLSSA----------------KITTGLFTENTIVV 240

Query: 241 AEGEMLVEGIFKVITCGFPPLEDRDKSLKLLAGQDFFGGGSLTKEETLRLADLEKRAVND 300
           AEGEMLVEGIFKVITCGFPPLEDRDKSLKLLAGQDFFGGGSLTKEETLRLADLEKRAVND
Sbjct: 241 AEGEMLVEGIFKVITCGFPPLEDRDKSLKLLAGQDFFGGGSLTKEETLRLADLEKRAVND 300

Query: 301 MFVILSDIWLDSEEAMGKLETILDGFENVEIVPSLFVLMGNFCSRPCNLAFNSYSSLRLQ 360
           MFVILSDIWLDSEEAMGKLETILDGFENVEIVPSLFVLMGNFCSRPCNLAFNSYSSLRLQ
Sbjct: 301 MFVILSDIWLDSEEAMGKLETILDGFENVEIVPSLFVLMGNFCSRPCNLAFNSYSSLRLQ 360

Query: 361 FGKLGKMIAARPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSN 420
           FGKLGKMIAARPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSN
Sbjct: 361 FGKLGKMIAARPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSN 420

Query: 421 PCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQ 480
           PCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQ
Sbjct: 421 PCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQ 480

Query: 481 PIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVE 540
           PIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVE
Sbjct: 481 PIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVE 528

Query: 541 LSAL 544
           LSAL
Sbjct: 541 LSAL 528

[Close]
BLAST of Cp4.1LG02g09970 vs. NCBI nr
Match: XP_022998323.1 (DNA polymerase epsilon subunit B [Cucurbita maxima])

HSP 1 Score: 1048 bits (2709), Expect = 0.0
Identity = 523/544 (96.14%), Postives = 528/544 (97.06%), Query Frame = 0 

Query: 1   MDESTLRRKVQRKSKIRGYSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSSI 60
           MDESTLRRKVQRKSKIRGYSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSSI
Sbjct: 1   MDESTLRRKVQRKSKIRGYSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSSI 60

Query: 61  IDKDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISKFRYDPIKKIFYMHTGSL 120
           IDKDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISK+RYDPIKKIFYMHTGSL
Sbjct: 61  IDKDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISKYRYDPIKKIFYMHTGSL 120

Query: 121 PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGSCEISPIQSLVGQTGRK 180
           PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFD+GMSHFGSCEISPIQSLVGQTGRK
Sbjct: 121 PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDSGMSHFGSCEISPIQSLVGQTGRK 180

Query: 181 WVMGVISQMEDGHFYLEDLTASVEINLSSAISFTDILYNLEKSKLHKITTGLFTENTIVV 240
           WVMGVISQMEDGHFYLEDLTASVEINLSSA                KITTGLFTENT+VV
Sbjct: 181 WVMGVISQMEDGHFYLEDLTASVEINLSSA----------------KITTGLFTENTVVV 240

Query: 241 AEGEMLVEGIFKVITCGFPPLEDRDKSLKLLAGQDFFGGGSLTKEETLRLADLEKRAVND 300
           AEGEMLVEGIFKVITCGFPPLEDRDKSLKLLAGQDFFGGGSLTKEETLRLADLEKRA+ND
Sbjct: 241 AEGEMLVEGIFKVITCGFPPLEDRDKSLKLLAGQDFFGGGSLTKEETLRLADLEKRAIND 300

Query: 301 MFVILSDIWLDSEEAMGKLETILDGFENVEIVPSLFVLMGNFCSRPCNLAFNSYSSLRLQ 360
           MFVILSDIWLDSEEAMGKLETILDGFENVEIVPSLFVLMGNFCSRPCNLAFNSYSSLRLQ
Sbjct: 301 MFVILSDIWLDSEEAMGKLETILDGFENVEIVPSLFVLMGNFCSRPCNLAFNSYSSLRLQ 360

Query: 361 FGKLGKMIAARPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSN 420
           FGKLGKMIA+RPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSN
Sbjct: 361 FGKLGKMIASRPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSN 420

Query: 421 PCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQ 480
           PCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQ
Sbjct: 421 PCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQ 480

Query: 481 PIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVE 540
           PIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVE
Sbjct: 481 PIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVE 528

Query: 541 LSAL 544
           LSAL
Sbjct: 541 LSAL 528

[Close]
BLAST of Cp4.1LG02g09970 vs. NCBI nr
Match: KAG7037068.1 (DNA polymerase epsilon subunit B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1035 bits (2676), Expect = 0.0
Identity = 518/544 (95.22%), Postives = 521/544 (95.77%), Query Frame = 0 

Query: 1   MDESTLRRKVQRKSKIRGYSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSSI 60
           MDESTLRRKVQRKSKIRGYSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSSI
Sbjct: 1   MDESTLRRKVQRKSKIRGYSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSSI 60

Query: 61  IDKDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISKFRYDPIKKIFYMHTGSL 120
           IDKDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISK+RYDPIKKIFYMHTGSL
Sbjct: 61  IDKDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISKYRYDPIKKIFYMHTGSL 120

Query: 121 PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGSCEISPIQSLVGQTGRK 180
           PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFD+GMSHFGSCEISPIQSLVGQTGRK
Sbjct: 121 PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDSGMSHFGSCEISPIQSLVGQTGRK 180

Query: 181 WVMGVISQMEDGHFYLEDLTASVEINLSSAISFTDILYNLEKSKLHKITTGLFTENTIVV 240
           WVMGVISQMEDGHF+LEDLTAS                       HKITTGLFTENTIVV
Sbjct: 181 WVMGVISQMEDGHFFLEDLTAS-----------------------HKITTGLFTENTIVV 240

Query: 241 AEGEMLVEGIFKVITCGFPPLEDRDKSLKLLAGQDFFGGGSLTKEETLRLADLEKRAVND 300
           AEGEMLVEGIFKVITCGFPPLEDRDKSLKLLAGQDFFGGGSLTKEETLRLADLEKRAVND
Sbjct: 241 AEGEMLVEGIFKVITCGFPPLEDRDKSLKLLAGQDFFGGGSLTKEETLRLADLEKRAVND 300

Query: 301 MFVILSDIWLDSEEAMGKLETILDGFENVEIVPSLFVLMGNFCSRPCNLAFNSYSSLRLQ 360
           MFVILSDIWLDSEEAMGKLETILDGFENVEIVPSLFVLMGNFCSRPCNLAFNSYSSLRLQ
Sbjct: 301 MFVILSDIWLDSEEAMGKLETILDGFENVEIVPSLFVLMGNFCSRPCNLAFNSYSSLRLQ 360

Query: 361 FGKLGKMIAARPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSN 420
           FGKLGKMIAARPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSN
Sbjct: 361 FGKLGKMIAARPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSN 420

Query: 421 PCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQ 480
           PCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQ
Sbjct: 421 PCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQ 480

Query: 481 PIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVE 540
           PIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVE
Sbjct: 481 PIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVE 521

Query: 541 LSAL 544
           LSAL
Sbjct: 541 LSAL 521

[Close]
BLAST of Cp4.1LG02g09970 vs. NCBI nr
Match: KAG6607399.1 (DNA polymerase epsilon subunit B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 997 bits (2577), Expect = 0.0
Identity = 502/544 (92.28%), Postives = 505/544 (92.83%), Query Frame = 0 

Query: 1   MDESTLRRKVQRKSKIRGYSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSSI 60
           MDESTLRRKVQRKSKIRGYSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSSI
Sbjct: 1   MDESTLRRKVQRKSKIRGYSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSSI 60

Query: 61  IDKDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISKFRYDPIKKIFYMHTGSL 120
           IDKDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISK+RYDPIKKIFYMHTGSL
Sbjct: 61  IDKDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISKYRYDPIKKIFYMHTGSL 120

Query: 121 PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGSCEISPIQSLVGQTGRK 180
           PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFD+GMSHFGSCEISP+QSLVGQTGRK
Sbjct: 121 PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDSGMSHFGSCEISPVQSLVGQTGRK 180

Query: 181 WVMGVISQMEDGHFYLEDLTASVEINLSSAISFTDILYNLEKSKLHKITTGLFTENTIVV 240
           WVMGVISQMED                                       GLFTENTIVV
Sbjct: 181 WVMGVISQMED---------------------------------------GLFTENTIVV 240

Query: 241 AEGEMLVEGIFKVITCGFPPLEDRDKSLKLLAGQDFFGGGSLTKEETLRLADLEKRAVND 300
           AEGEMLVEGIFKVITCGFPPLEDRDKSLKLLAGQDFFGGGSLTKEETLRLADLEKRAVND
Sbjct: 241 AEGEMLVEGIFKVITCGFPPLEDRDKSLKLLAGQDFFGGGSLTKEETLRLADLEKRAVND 300

Query: 301 MFVILSDIWLDSEEAMGKLETILDGFENVEIVPSLFVLMGNFCSRPCNLAFNSYSSLRLQ 360
           MFVILSDIWLDSEEAMGKLETILDGFENVEIVPSLFVLMGNFCSRPCNLAFNSYSSLRLQ
Sbjct: 301 MFVILSDIWLDSEEAMGKLETILDGFENVEIVPSLFVLMGNFCSRPCNLAFNSYSSLRLQ 360

Query: 361 FGKLGKMIAARPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSN 420
           FGKLGKMIAARPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSN
Sbjct: 361 FGKLGKMIAARPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSN 420

Query: 421 PCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQ 480
           PCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQ
Sbjct: 421 PCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQ 480

Query: 481 PIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVE 540
           PIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVE
Sbjct: 481 PIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVE 505

Query: 541 LSAL 544
           LSAL
Sbjct: 541 LSAL 505

[Close]
BLAST of Cp4.1LG02g09970 vs. ExPASy TrEMBL
Match: A0A6J1GCV3 (DNA polymerase epsilon subunit OS=Cucurbita moschata OX=3662 GN=LOC111452793 PE=3 SV=1)

HSP 1 Score: 1048 bits (2710), Expect = 0.0
Identity = 525/544 (96.51%), Postives = 528/544 (97.06%), Query Frame = 0 

Query: 1   MDESTLRRKVQRKSKIRGYSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSSI 60
           MDESTLRRKVQRKSKIRGYSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSSI
Sbjct: 1   MDESTLRRKVQRKSKIRGYSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSSI 60

Query: 61  IDKDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISKFRYDPIKKIFYMHTGSL 120
           IDKDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISK+RYDPIKKIFYMHTGSL
Sbjct: 61  IDKDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISKYRYDPIKKIFYMHTGSL 120

Query: 121 PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGSCEISPIQSLVGQTGRK 180
           PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFD+GMSHFGSCEISPIQSLVGQTGRK
Sbjct: 121 PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDSGMSHFGSCEISPIQSLVGQTGRK 180

Query: 181 WVMGVISQMEDGHFYLEDLTASVEINLSSAISFTDILYNLEKSKLHKITTGLFTENTIVV 240
           WVMGVISQMEDGHF+LEDLTASVEINLSSA                KITTGLFTENTIVV
Sbjct: 181 WVMGVISQMEDGHFFLEDLTASVEINLSSA----------------KITTGLFTENTIVV 240

Query: 241 AEGEMLVEGIFKVITCGFPPLEDRDKSLKLLAGQDFFGGGSLTKEETLRLADLEKRAVND 300
           AEGEMLVEGIFKVITCGFPPLEDRDKSLKLLAGQDFFGGGSLTKEETLRLADLEKRAVND
Sbjct: 241 AEGEMLVEGIFKVITCGFPPLEDRDKSLKLLAGQDFFGGGSLTKEETLRLADLEKRAVND 300

Query: 301 MFVILSDIWLDSEEAMGKLETILDGFENVEIVPSLFVLMGNFCSRPCNLAFNSYSSLRLQ 360
           MFVILSDIWLDSEEAMGKLETILDGFENVEIVPSLFVLMGNFCSRPCNLAFNSYSSLRLQ
Sbjct: 301 MFVILSDIWLDSEEAMGKLETILDGFENVEIVPSLFVLMGNFCSRPCNLAFNSYSSLRLQ 360

Query: 361 FGKLGKMIAARPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSN 420
           FGKLGKMIAARPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSN
Sbjct: 361 FGKLGKMIAARPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSN 420

Query: 421 PCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQ 480
           PCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQ
Sbjct: 421 PCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQ 480

Query: 481 PIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVE 540
           PIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVE
Sbjct: 481 PIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVE 528

Query: 541 LSAL 544
           LSAL
Sbjct: 541 LSAL 528

[Close]
BLAST of Cp4.1LG02g09970 vs. ExPASy TrEMBL
Match: A0A6J1KGF0 (DNA polymerase epsilon subunit OS=Cucurbita maxima OX=3661 GN=LOC111492993 PE=3 SV=1)

HSP 1 Score: 1048 bits (2709), Expect = 0.0
Identity = 523/544 (96.14%), Postives = 528/544 (97.06%), Query Frame = 0 

Query: 1   MDESTLRRKVQRKSKIRGYSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSSI 60
           MDESTLRRKVQRKSKIRGYSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSSI
Sbjct: 1   MDESTLRRKVQRKSKIRGYSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSSI 60

Query: 61  IDKDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISKFRYDPIKKIFYMHTGSL 120
           IDKDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISK+RYDPIKKIFYMHTGSL
Sbjct: 61  IDKDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISKYRYDPIKKIFYMHTGSL 120

Query: 121 PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGSCEISPIQSLVGQTGRK 180
           PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFD+GMSHFGSCEISPIQSLVGQTGRK
Sbjct: 121 PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDSGMSHFGSCEISPIQSLVGQTGRK 180

Query: 181 WVMGVISQMEDGHFYLEDLTASVEINLSSAISFTDILYNLEKSKLHKITTGLFTENTIVV 240
           WVMGVISQMEDGHFYLEDLTASVEINLSSA                KITTGLFTENT+VV
Sbjct: 181 WVMGVISQMEDGHFYLEDLTASVEINLSSA----------------KITTGLFTENTVVV 240

Query: 241 AEGEMLVEGIFKVITCGFPPLEDRDKSLKLLAGQDFFGGGSLTKEETLRLADLEKRAVND 300
           AEGEMLVEGIFKVITCGFPPLEDRDKSLKLLAGQDFFGGGSLTKEETLRLADLEKRA+ND
Sbjct: 241 AEGEMLVEGIFKVITCGFPPLEDRDKSLKLLAGQDFFGGGSLTKEETLRLADLEKRAIND 300

Query: 301 MFVILSDIWLDSEEAMGKLETILDGFENVEIVPSLFVLMGNFCSRPCNLAFNSYSSLRLQ 360
           MFVILSDIWLDSEEAMGKLETILDGFENVEIVPSLFVLMGNFCSRPCNLAFNSYSSLRLQ
Sbjct: 301 MFVILSDIWLDSEEAMGKLETILDGFENVEIVPSLFVLMGNFCSRPCNLAFNSYSSLRLQ 360

Query: 361 FGKLGKMIAARPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSN 420
           FGKLGKMIA+RPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSN
Sbjct: 361 FGKLGKMIASRPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSN 420

Query: 421 PCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQ 480
           PCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQ
Sbjct: 421 PCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQ 480

Query: 481 PIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVE 540
           PIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVE
Sbjct: 481 PIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVE 528

Query: 541 LSAL 544
           LSAL
Sbjct: 541 LSAL 528

[Close]
BLAST of Cp4.1LG02g09970 vs. ExPASy TrEMBL
Match: A0A5D3BIF9 (Glutamate decarboxylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00380 PE=3 SV=1)

HSP 1 Score: 976 bits (2524), Expect = 0.0
Identity = 486/545 (89.17%), Postives = 511/545 (93.76%), Query Frame = 0 

Query: 1    MDESTLRRKVQRKSKIRG-YSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSS 60
            MD  TLR+KVQRK+KIRG YSIKL+AL EIVSF SRF G EDDAI+LVLD LH+ESL+S 
Sbjct: 613  MDALTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGFEDDAIELVLDDLHEESLKSP 672

Query: 61   IIDKDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISKFRYDPIKKIFYMHTGS 120
            I++KD VHRV+S LLAA+EA E  P+T TST+ALCIIDAFDISKFRYDPIKKIF+ HTG 
Sbjct: 673  ILEKDGVHRVISKLLAAEEAEEASPNTITSTTALCIIDAFDISKFRYDPIKKIFHRHTGD 732

Query: 121  LPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGSCEISPIQSLVGQTGR 180
            LPIHGDA AKAALYRDRFLLLSQRLSRDQHFSKPAFD GMSHFGSCEISPIQSLVGQTGR
Sbjct: 733  LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR 792

Query: 181  KWVMGVISQMEDGHFYLEDLTASVEINLSSAISFTDILYNLEKSKLHKITTGLFTENTIV 240
            KWVMGVISQMEDGHFYLEDLTASVEINLS+AISFT   Y+      HKITTGLFTENTI+
Sbjct: 793  KWVMGVISQMEDGHFYLEDLTASVEINLSNAISFTGNFYD------HKITTGLFTENTII 852

Query: 241  VAEGEMLVEGIFKVITCGFPPLEDRDKSLKLLAGQDFFGGGSLTKEETLRLADLEKRAVN 300
            VAEGEMLVEGIF+V+TCGFPPLE+RDKSLKLLAGQDFFGGG L KEETLRLADLEK+AVN
Sbjct: 853  VAEGEMLVEGIFQVVTCGFPPLEERDKSLKLLAGQDFFGGGVLPKEETLRLADLEKKAVN 912

Query: 301  DMFVILSDIWLDSEEAMGKLETILDGFENVEIVPSLFVLMGNFCSRPCNLAFNSYSSLRL 360
            DMFVILSDIWLDSEEAMGKLETILDGFENVE+VPSLFVLMGNFCS PCN+AFNS+SSLRL
Sbjct: 913  DMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRL 972

Query: 361  QFGKLGKMIAARPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSS 420
            QFGKLGKMIAA PRL +HSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQ+HVPNA FSS
Sbjct: 973  QFGKLGKMIAAHPRLNKHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQVHVPNATFSS 1032

Query: 421  NPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVI 480
            NPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVI
Sbjct: 1033 NPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVI 1092

Query: 481  QPIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEV 540
            QPIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEV
Sbjct: 1093 QPIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEV 1151

Query: 541  ELSAL 544
            ELSAL
Sbjct: 1153 ELSAL 1151

[Close]
BLAST of Cp4.1LG02g09970 vs. ExPASy TrEMBL
Match: A0A5A7T342 (Glutamate decarboxylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold112G00330 PE=3 SV=1)

HSP 1 Score: 971 bits (2509), Expect = 0.0
Identity = 484/545 (88.81%), Postives = 509/545 (93.39%), Query Frame = 0 

Query: 1    MDESTLRRKVQRKSKIRG-YSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSS 60
            MD  TLR+KVQRK+KIRG YSIKL+AL EIVSF SRF G EDDAI+LVLD LH+ESL+S 
Sbjct: 614  MDALTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGFEDDAIELVLDDLHEESLKSP 673

Query: 61   IIDKDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISKFRYDPIKKIFYMHTGS 120
            I++KD VHRV+S LLAA+EA E  P+T TST+ALCIIDAFDISKFRYDPIKKIF+ HTG 
Sbjct: 674  ILEKDGVHRVISKLLAAEEAEEASPNTITSTTALCIIDAFDISKFRYDPIKKIFHRHTGD 733

Query: 121  LPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGSCEISPIQSLVGQTGR 180
            LPIHGDA AKAALYRDRFLLLSQRLSRDQHFSKPAFD GMSHFGSCEISPIQSLVGQTGR
Sbjct: 734  LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR 793

Query: 181  KWVMGVISQMEDGHFYLEDLTASVEINLSSAISFTDILYNLEKSKLHKITTGLFTENTIV 240
            KWVMGVISQMEDGHFYLEDLTASVEINLS+AISFT   Y+        ITTGLFTENTI+
Sbjct: 794  KWVMGVISQMEDGHFYLEDLTASVEINLSNAISFTGNFYD--------ITTGLFTENTII 853

Query: 241  VAEGEMLVEGIFKVITCGFPPLEDRDKSLKLLAGQDFFGGGSLTKEETLRLADLEKRAVN 300
            VAEGEMLVEGIF+V+TCGFPPLE+RDKSLKLLAGQDFFGGG L KEETLRLADLEK+AVN
Sbjct: 854  VAEGEMLVEGIFQVVTCGFPPLEERDKSLKLLAGQDFFGGGVLPKEETLRLADLEKKAVN 913

Query: 301  DMFVILSDIWLDSEEAMGKLETILDGFENVEIVPSLFVLMGNFCSRPCNLAFNSYSSLRL 360
            DMFVILSDIWLDSEEAMGKLETILDGFENVE+VPSLFVLMGNFCS PCN+AFNS+SSLRL
Sbjct: 914  DMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRL 973

Query: 361  QFGKLGKMIAARPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSS 420
            QFGKLGKMIAA PRL +HSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQ+HVPNA FSS
Sbjct: 974  QFGKLGKMIAAHPRLNKHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQVHVPNATFSS 1033

Query: 421  NPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVI 480
            NPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVI
Sbjct: 1034 NPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVI 1093

Query: 481  QPIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEV 540
            QPIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEV
Sbjct: 1094 QPIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEV 1150

Query: 541  ELSAL 544
            ELSAL
Sbjct: 1154 ELSAL 1150

[Close]
BLAST of Cp4.1LG02g09970 vs. ExPASy TrEMBL
Match: A0A6J1C7G4 (DNA polymerase epsilon subunit OS=Momordica charantia OX=3673 GN=LOC111009082 PE=3 SV=1)

HSP 1 Score: 962 bits (2486), Expect = 0.0
Identity = 479/544 (88.05%), Postives = 503/544 (92.46%), Query Frame = 0 

Query: 1   MDESTLRRKVQRKSKIRGYSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSSI 60
           MD ST+RRKVQRKSKIRGYS+KLDAL EI+SFASRF G ED AID +LD LH ESLQSSI
Sbjct: 1   MDASTMRRKVQRKSKIRGYSLKLDALDEILSFASRFHGEEDAAIDFILDELHSESLQSSI 60

Query: 61  IDKDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISKFRYDPIKKIFYMHTGSL 120
           I KDAVHR VS+LL ADE G++ PDT TSTSA  IID F I++FRYDPIKKIFY HTGSL
Sbjct: 61  IHKDAVHRAVSVLLGADEVGKQSPDTITSTSAPRIIDVFGITRFRYDPIKKIFYQHTGSL 120

Query: 121 PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGSCEISPIQSLVGQTGRK 180
           PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAF+TGMSHFGSCEIS IQSLVGQTGR+
Sbjct: 121 PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFNTGMSHFGSCEISSIQSLVGQTGRR 180

Query: 181 WVMGVISQMEDGHFYLEDLTASVEINLSSAISFTDILYNLEKSKLHKITTGLFTENTIVV 240
           WVMGVISQMEDGHFYLEDLTASVEINLS+A                KITTGLFTENTIVV
Sbjct: 181 WVMGVISQMEDGHFYLEDLTASVEINLSNA----------------KITTGLFTENTIVV 240

Query: 241 AEGEMLVEGIFKVITCGFPPLEDRDKSLKLLAGQDFFGGGSLTKEETLRLADLEKRAVND 300
           AEGEMLVEGIF+VITCGFPPLEDRDKSLK+LAGQDFFG G+LTKEETLRLADLEKRA+ND
Sbjct: 241 AEGEMLVEGIFQVITCGFPPLEDRDKSLKMLAGQDFFGAGALTKEETLRLADLEKRAIND 300

Query: 301 MFVILSDIWLDSEEAMGKLETILDGFENVEIVPSLFVLMGNFCSRPCNLAFNSYSSLRLQ 360
           MFVILSDIWLDSEEAM KLETILDGFENVE+VPSLFVLMGNFCSRPCNLAFNS+SSLRLQ
Sbjct: 301 MFVILSDIWLDSEEAMRKLETILDGFENVEVVPSLFVLMGNFCSRPCNLAFNSFSSLRLQ 360

Query: 361 FGKLGKMIAARPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSN 420
           FGKLGKMIAA PRL E+SKFLFIPGPDDAGPSTVLPRCALPKYLTEEL+MHVPNAIFSSN
Sbjct: 361 FGKLGKMIAAHPRLIENSKFLFIPGPDDAGPSTVLPRCALPKYLTEELRMHVPNAIFSSN 420

Query: 421 PCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQ 480
           PCR++FYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHL+ATITHQSHLCPLPLVIQ
Sbjct: 421 PCRIKFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLIATITHQSHLCPLPLVIQ 480

Query: 481 PIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVE 540
           PIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSF+ND TFVAYRPCNQEVE
Sbjct: 481 PIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFSNDGTFVAYRPCNQEVE 528

Query: 541 LSAL 544
           LSAL
Sbjct: 541 LSAL 528

[Close]
BLAST of Cp4.1LG02g09970 vs. TAIR 10
Match: AT5G22110.1 (DNA polymerase epsilon subunit B2 )

HSP 1 Score: 756.1 bits (1951), Expect = 1.9e-218
Identity = 378/542 (69.74%), Postives = 443/542 (81.73%), Query Frame = 0 

Query: 4   STLRRKVQRKSKIRGYSIKLDALAEIVSFASRF-DGCEDDAIDLVLDHLHDESLQSSIID 63
           S  R+K+Q+K K RGY++K DAL EI+ FA +F D  + +AIDL+LD+L  E+ +SS +D
Sbjct: 5   SQKRKKIQKKFKNRGYNLKFDALDEILVFADQFPDDDDGEAIDLLLDNL-QETHKSSTVD 64

Query: 64  KDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISKFRYDPIKKIFYMHTGSLPI 123
            ++V  +++ LL A  A EE    +TS S+L IIDAF + KF YD +KK F  HT SLPI
Sbjct: 65  AESVRGLINRLLGAHNAPEE---PTTSASSLAIIDAFLVPKFGYDSVKKKFNEHTSSLPI 124

Query: 124 HGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGSCEISPIQSLVGQTGRKWV 183
           HG+ASAK ALYR+RF+LLSQR+SR +HFS+PAFD  MS F + EIS IQSL+ Q GRKWV
Sbjct: 125 HGEASAKTALYRERFMLLSQRVSRAEHFSRPAFDAEMSQFENNEISSIQSLISQRGRKWV 184

Query: 184 MGVISQMEDGHFYLEDLTASVEINLSSAISFTDILYNLEKSKLHKITTGLFTENTIVVAE 243
           MGVISQ+EDGHFYLEDL+ASVEI+LS A                KITTG FTENTI++AE
Sbjct: 185 MGVISQLEDGHFYLEDLSASVEIDLSKA----------------KITTGFFTENTIILAE 244

Query: 244 GEMLVEGIFKVITCGFPPLEDRDKSLKLLAGQDFFGGGSLTKEETLRLADLEKRAVNDMF 303
           GEM V GIF+VITCGFPPLEDRDK+LK  +  DFFGGG+LTKEE ++LADLE++AVND F
Sbjct: 245 GEMQVNGIFQVITCGFPPLEDRDKTLKAHSEYDFFGGGTLTKEEMIKLADLERQAVNDTF 304

Query: 304 VILSDIWLDSEEAMGKLETILDGFENVEIVPSLFVLMGNFCSRPCNLAFNSYSSLRLQFG 363
           VILSDIWLD EE M KLET+LDGFE+VE VPSLFV MGNFCSRPCNL+F SYSSLR QFG
Sbjct: 305 VILSDIWLDDEEVMRKLETVLDGFESVETVPSLFVFMGNFCSRPCNLSFGSYSSLREQFG 364

Query: 364 KLGKMIAARPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPC 423
           KLG+MI   PRLKE+S+FLFIPGP+DAGPSTVLPRCALPKYLTEEL+  +PNAIFSSNPC
Sbjct: 365 KLGRMIGNHPRLKENSRFLFIPGPEDAGPSTVLPRCALPKYLTEELRNIIPNAIFSSNPC 424

Query: 424 RVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPI 483
           RV+FY QEIVFFRQDLLYRMRRSCL+ PS+EET+DPF+HLV TITHQSHLCPLPL++QPI
Sbjct: 425 RVKFYNQEIVFFRQDLLYRMRRSCLVTPSSEETNDPFKHLVYTITHQSHLCPLPLMVQPI 484

Query: 484 IWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELS 543
           IWNYDH L LYPTPH IVLGD+S+Q+  K+ G TCFNPGSF+ DSTFVAYRP  QEVELS
Sbjct: 485 IWNYDHALRLYPTPHTIVLGDKSEQEVCKFGGTTCFNPGSFSTDSTFVAYRPSTQEVELS 526

Query: 544 AL 545
           AL
Sbjct: 545 AL 526

The following BLAST results are available for this feature:
BLAST of Cp4.1LG02g09970 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q500V92.7e-21769.74DNA polymerase epsilon subunit B OS=Arabidopsis thaliana OX=3702 GN=DPB2 PE=1 SV... [more]
Q5ZKQ68.9e-8033.39DNA polymerase epsilon subunit 2 OS=Gallus gallus OX=9031 GN=POLE2 PE=2 SV=1[more]
Q54Y852.9e-7832.46DNA polymerase epsilon subunit 2 OS=Dictyostelium discoideum OX=44689 GN=pole2 P... [more]
A7YWS74.9e-7832.85DNA polymerase epsilon subunit 2 OS=Bos taurus OX=9913 GN=POLE2 PE=2 SV=1[more]
P562822.3e-7532.68DNA polymerase epsilon subunit 2 OS=Homo sapiens OX=9606 GN=POLE2 PE=1 SV=2[more]
BLAST of Cp4.1LG02g09970 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023525784.10.097.06DNA polymerase epsilon subunit B [Cucurbita pepo subsp. pepo][more]
XP_022949454.10.096.51DNA polymerase epsilon subunit B [Cucurbita moschata][more]
XP_022998323.10.096.14DNA polymerase epsilon subunit B [Cucurbita maxima][more]
KAG7037068.10.095.22DNA polymerase epsilon subunit B [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6607399.10.092.28DNA polymerase epsilon subunit B, partial [Cucurbita argyrosperma subsp. sororia... [more]
BLAST of Cp4.1LG02g09970 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GCV30.096.51DNA polymerase epsilon subunit OS=Cucurbita moschata OX=3662 GN=LOC111452793 PE=... [more]
A0A6J1KGF00.096.14DNA polymerase epsilon subunit OS=Cucurbita maxima OX=3661 GN=LOC111492993 PE=3 ... [more]
A0A5D3BIF90.089.17Glutamate decarboxylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7T3420.088.81Glutamate decarboxylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A6J1C7G40.088.05DNA polymerase epsilon subunit OS=Momordica charantia OX=3673 GN=LOC111009082 PE... [more]
BLAST of Cp4.1LG02g09970 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G22110.11.9e-21869.74DNA polymerase epsilon subunit B2 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.8.60coord: 1..72
e-value: 6.5E-10
score: 41.0
NoneNo IPR availableGENE3D3.60.21.60coord: 310..540
e-value: 6.0E-6
score: 27.3
IPR007185DNA polymerase alpha/delta/epsilon, subunit BPFAMPF04042DNA_pol_E_Bcoord: 302..509
e-value: 6.2E-47
score: 159.7
IPR016266DNA polymerase epsilon, subunit BPIRSFPIRSF000799DNA_pol_epsilon_2coord: 1..544
e-value: 3.6E-189
score: 627.3
IPR016266DNA polymerase epsilon, subunit BPANTHERPTHR12708DNA POLYMERASE EPSILON SUBUNIT Bcoord: 7..543

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g09970.1Cp4.1LG02g09970.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006261 DNA-dependent DNA replication
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0006536 glutamate metabolic process
biological_process GO:0051781 positive regulation of cell division
biological_process GO:0006260 DNA replication
cellular_component GO:0008622 epsilon DNA polymerase complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0070182 DNA polymerase binding
molecular_function GO:0004351 glutamate decarboxylase activity
molecular_function GO:0030170 pyridoxal phosphate binding