Cp4.1LG02g09830 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCCTACGGCGAGGAGGAGATTTCATTTCCTCAATTCTTCCTATTTTTCTCCATTGATATGGGTCTCTTTTTCTCCAGGAACATCGCCAAATTTCTCCTCTCTTCCTTCTTCTCTTCCCAGAAATTCCCTTCTCAGATCGAAAACGTCGTCTCTGTCGTCTCCTCTCGTACTGGACGTCATCGGCAGCGCTACAATCAAGAGTATCGCCTTGTTGTCGGGTACGTTTCTCCATTTCACTCTCTGATTTCGTTATTCTAGGGTTTGTTGTTCTTGTAAGTTGAGGCTCTGATTTTTCCGATTTCTTCTTCTAGATGCATTCCTTATCGATATAAAGATGCTCTGAAATCGTTTTCGGTTGATAATATTGAAGTTCTTGGGATTAGTTCACAGAAAGGACAAGCGATGATGTTTCCGAAGGTATTGTTATATCGATTCTTGGCGTCGATTATTCCGATTCGCTCTTTTGTACCGATTGTTTGATGATTTTGAAATTTTAGGGCGGTTGGGAGAACGACGAATCGATGGAGACTGCGGCTTTGAGAGAGACATTGGAGGAAGCTGGTGTGGTTGGCAACATCGAAGTTAGTAATTCGAATTTCTAGGGTTTCCATTGTTGATTCTGTCGAAGAAATTTTTGTTCATCCAAATTCCAATTTAATTTCACTTACAGAAAAGATTGGGAAAATGGTATTACAAGAGCAAGAACCAAGCGACGATGCATGAAGCCTACATGTTCCCGCTGCAGGTCACCAAACTACTGGAAAATTGGCCGGAGAAAGATTTCCGGAGGCGGGAATGGGTGAGTTCTGGCTTAAATTCAAACGAAAACCCTAAATGTTCTTCGTTCAAAACTAATTGAATTTCCATTGGAACTTGTAGATGAGCGTGGAGAAAGCCAGAGAGGTTTGCCCTCAATGGATGAAAGAGGCTTTAGATTTATTGATTAGTCAACGAACAGAACTTGAGCAGAGCTTGGATGAAGAAGAAACCCCCTGTTCATAAACGTAGTAGTAGTTGTAGTCTTAGTGGTGGTCTATTTCTTGGGAAGATCGGGGGATCGTTAAGCCATGTTTGAAATGACTTTTTAAGTGATTATTTTAGAAAGTCGTTCTAAATCCGTCGTCATTGAGGCGCATAAAAAAGGGTGGAGATCGAAGAAGGCGAGAGATAATTGTGATTGTTTGCTTGTTTAAGTGATTATTTTAGAAAGTCGTTCTAAATCCGTCGTCATTGAGGCGCATAAAAAAGGGTCGGGATCGAAGAAGGCGAGAGATAATTGTGATTGTTTGCTTGTTTAAGTGTCCTTCAAGGGATAATGCCGCGGGTGGAAATAGACCATCTTGTAAATCACCCAATTCTTTCATTCAATTTAAATCATTCTTTCTTATCATTTTTGCTTTTTCGTTCCGTGGCTTGAATGTTGAATTGGGTCGGTTCATAAGTTAC GCCTACGGCGAGGAGGAGATTTCATTTCCTCAATTCTTCCTATTTTTCTCCATTGATATGGGTCTCTTTTTCTCCAGGAACATCGCCAAATTTCTCCTCTCTTCCTTCTTCTCTTCCCAGAAATTCCCTTCTCAGATCGAAAACGTCGTCTCTGTCGTCTCCTCTCGTACTGGACGTCATCGGCAGCGCTACAATCAAGAGTATCGCCTTGTTGTCGGATGCATTCCTTATCGATATAAAGATGCTCTGAAATCGTTTTCGGTTGATAATATTGAAGTTCTTGGGATTAGTTCACAGAAAGGACAAGCGATGATGTTTCCGAAGGGCGGTTGGGAGAACGACGAATCGATGGAGACTGCGGCTTTGAGAGAGACATTGGAGGAAGCTGGTGTGGTTGGCAACATCGAAAAAAGATTGGGAAAATGGTATTACAAGAGCAAGAACCAAGCGACGATGCATGAAGCCTACATGTTCCCGCTGCAGGTCACCAAACTACTGGAAAATTGGCCGGAGAAAGATTTCCGGAGGCGGGAATGGATGAGCGTGGAGAAAGCCAGAGAGGTTTGCCCTCAATGGATGAAAGAGGCTTTAGATTTATTGATTAGTCAACGAACAGAACTTGAGCAGAGCTTGGATGAAGAAGAAACCCCCTGTTCATAAACGTAGTAGTAGTTGTAGTCTTAGTGGTGGTCTATTTCTTGGGAAGATCGGGGGATCGTTAAGCCATGTTTGAAATGACTTTTTAAGTGATTATTTTAGAAAGTCGTTCTAAATCCGTCGTCATTGAGGCGCATAAAAAAGGGTGGAGATCGAAGAAGGCGAGAGATAATTGTGATTGTTTGCTTGTTTAAGTGATTATTTTAGAAAGTCGTTCTAAATCCGTCGTCATTGAGGCGCATAAAAAAGGGTCGGGATCGAAGAAGGCGAGAGATAATTGTGATTGTTTGCTTGTTTAAGTGTCCTTCAAGGGATAATGCCGCGGGTGGAAATAGACCATCTTGTAAATCACCCAATTCTTTCATTCAATTTAAATCATTCTTTCTTATCATTTTTGCTTTTTCGTTCCGTGGCTTGAATGTTGAATTGGGTCGGTTCATAAGTTAC ATGGGTCTCTTTTTCTCCAGGAACATCGCCAAATTTCTCCTCTCTTCCTTCTTCTCTTCCCAGAAATTCCCTTCTCAGATCGAAAACGTCGTCTCTGTCGTCTCCTCTCGTACTGGACGTCATCGGCAGCGCTACAATCAAGAGTATCGCCTTGTTGTCGGATGCATTCCTTATCGATATAAAGATGCTCTGAAATCGTTTTCGGTTGATAATATTGAAGTTCTTGGGATTAGTTCACAGAAAGGACAAGCGATGATGTTTCCGAAGGGCGGTTGGGAGAACGACGAATCGATGGAGACTGCGGCTTTGAGAGAGACATTGGAGGAAGCTGGTGTGGTTGGCAACATCGAAAAAAGATTGGGAAAATGGTATTACAAGAGCAAGAACCAAGCGACGATGCATGAAGCCTACATGTTCCCGCTGCAGGTCACCAAACTACTGGAAAATTGGCCGGAGAAAGATTTCCGGAGGCGGGAATGGATGAGCGTGGAGAAAGCCAGAGAGGTTTGCCCTCAATGGATGAAAGAGGCTTTAGATTTATTGATTAGTCAACGAACAGAACTTGAGCAGAGCTTGGATGAAGAAGAAACCCCCTGTTCATAA MGLFFSRNIAKFLLSSFFSSQKFPSQIENVVSVVSSRTGRHRQRYNQEYRLVVGCIPYRYKDALKSFSVDNIEVLGISSQKGQAMMFPKGGWENDESMETAALRETLEEAGVVGNIEKRLGKWYYKSKNQATMHEAYMFPLQVTKLLENWPEKDFRRREWMSVEKAREVCPQWMKEALDLLISQRTELEQSLDEEETPCS Homology
BLAST of Cp4.1LG02g09830 vs. ExPASy Swiss-Prot
Match: Q9LE73 (Nudix hydrolase 4 OS=Arabidopsis thaliana OX=3702 GN=NUDT4 PE=1 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 6.2e-47 Identity = 101/191 (52.88%), Postives = 134/191 (70.16%), Query Frame = 0
BLAST of Cp4.1LG02g09830 vs. ExPASy Swiss-Prot
Match: Q9LQU5 (Nudix hydrolase 18, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT18 PE=2 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 1.3e-44 Identity = 92/162 (56.79%), Postives = 117/162 (72.22%), Query Frame = 0
BLAST of Cp4.1LG02g09830 vs. ExPASy Swiss-Prot
Match: Q9ZU95 (Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT17 PE=2 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 1.7e-44 Identity = 92/165 (55.76%), Postives = 119/165 (72.12%), Query Frame = 0
BLAST of Cp4.1LG02g09830 vs. ExPASy Swiss-Prot
Match: Q8VY81 (Nudix hydrolase 21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT21 PE=2 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 2.7e-42 Identity = 91/169 (53.85%), Postives = 120/169 (71.01%), Query Frame = 0
BLAST of Cp4.1LG02g09830 vs. ExPASy Swiss-Prot
Match: Q93ZY7 (Nudix hydrolase 12, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT12 PE=2 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 4.3e-32 Identity = 80/181 (44.20%), Postives = 114/181 (62.98%), Query Frame = 0
BLAST of Cp4.1LG02g09830 vs. NCBI nr
Match: XP_023521214.1 (nudix hydrolase 18, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023525322.1 nudix hydrolase 18, mitochondrial-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 401 bits (1031), Expect = 4.51e-141 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g09830 vs. NCBI nr
Match: KAG6607385.1 (Nudix hydrolase 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037054.1 Nudix hydrolase 4 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 395 bits (1016), Expect = 8.74e-139 Identity = 197/200 (98.50%), Postives = 198/200 (99.00%), Query Frame = 0
BLAST of Cp4.1LG02g09830 vs. NCBI nr
Match: XP_022998739.1 (nudix hydrolase 18, mitochondrial-like [Cucurbita maxima]) HSP 1 Score: 395 bits (1015), Expect = 1.24e-138 Identity = 197/200 (98.50%), Postives = 198/200 (99.00%), Query Frame = 0
BLAST of Cp4.1LG02g09830 vs. NCBI nr
Match: XP_022949022.1 (nudix hydrolase 18, mitochondrial-like [Cucurbita moschata]) HSP 1 Score: 391 bits (1005), Expect = 4.01e-137 Identity = 197/200 (98.50%), Postives = 198/200 (99.00%), Query Frame = 0
BLAST of Cp4.1LG02g09830 vs. NCBI nr
Match: XP_022923899.1 (nudix hydrolase 18, mitochondrial-like [Cucurbita moschata] >XP_023519987.1 nudix hydrolase 18, mitochondrial-like [Cucurbita pepo subsp. pepo] >KAG7020068.1 Nudix hydrolase 4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 319 bits (817), Expect = 2.23e-108 Identity = 162/206 (78.64%), Postives = 179/206 (86.89%), Query Frame = 0
BLAST of Cp4.1LG02g09830 vs. ExPASy TrEMBL
Match: A0A6J1KF58 (nudix hydrolase 18, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111493314 PE=4 SV=1) HSP 1 Score: 395 bits (1015), Expect = 6.01e-139 Identity = 197/200 (98.50%), Postives = 198/200 (99.00%), Query Frame = 0
BLAST of Cp4.1LG02g09830 vs. ExPASy TrEMBL
Match: A0A6J1GAV3 (nudix hydrolase 18, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111452489 PE=4 SV=1) HSP 1 Score: 391 bits (1005), Expect = 1.94e-137 Identity = 197/200 (98.50%), Postives = 198/200 (99.00%), Query Frame = 0
BLAST of Cp4.1LG02g09830 vs. ExPASy TrEMBL
Match: A0A6J1E7N3 (nudix hydrolase 18, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111431483 PE=4 SV=1) HSP 1 Score: 319 bits (817), Expect = 1.08e-108 Identity = 162/206 (78.64%), Postives = 179/206 (86.89%), Query Frame = 0
BLAST of Cp4.1LG02g09830 vs. ExPASy TrEMBL
Match: A0A6J1KLX9 (nudix hydrolase 18, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111495376 PE=4 SV=1) HSP 1 Score: 318 bits (816), Expect = 1.53e-108 Identity = 162/206 (78.64%), Postives = 180/206 (87.38%), Query Frame = 0
BLAST of Cp4.1LG02g09830 vs. ExPASy TrEMBL
Match: A0A1J7HT24 (Nudix hydrolase domain-containing protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_06128 PE=4 SV=1) HSP 1 Score: 243 bits (620), Expect = 7.66e-79 Identity = 121/191 (63.35%), Postives = 148/191 (77.49%), Query Frame = 0
BLAST of Cp4.1LG02g09830 vs. TAIR 10
Match: AT1G18300.1 (nudix hydrolase homolog 4 ) HSP 1 Score: 188.7 bits (478), Expect = 4.4e-48 Identity = 101/191 (52.88%), Postives = 134/191 (70.16%), Query Frame = 0
BLAST of Cp4.1LG02g09830 vs. TAIR 10
Match: AT1G14860.1 (nudix hydrolase homolog 18 ) HSP 1 Score: 181.0 bits (458), Expect = 9.3e-46 Identity = 92/162 (56.79%), Postives = 117/162 (72.22%), Query Frame = 0
BLAST of Cp4.1LG02g09830 vs. TAIR 10
Match: AT2G01670.1 (nudix hydrolase homolog 17 ) HSP 1 Score: 180.6 bits (457), Expect = 1.2e-45 Identity = 92/165 (55.76%), Postives = 119/165 (72.12%), Query Frame = 0
BLAST of Cp4.1LG02g09830 vs. TAIR 10
Match: AT1G73540.1 (nudix hydrolase homolog 21 ) HSP 1 Score: 173.3 bits (438), Expect = 1.9e-43 Identity = 91/169 (53.85%), Postives = 120/169 (71.01%), Query Frame = 0
BLAST of Cp4.1LG02g09830 vs. TAIR 10
Match: AT1G12880.1 (nudix hydrolase homolog 12 ) HSP 1 Score: 139.4 bits (350), Expect = 3.1e-33 Identity = 80/181 (44.20%), Postives = 114/181 (62.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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