Cp4.1LG02g08770 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g08770
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	rRNA processing protein-related
Location	Cp4.1LG02: 6515956 .. 6516864 (+)
RNA-Seq Expression	Cp4.1LG02g08770
Synteny	Cp4.1LG02g08770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGTATCGGATAAAGATGTGAAGTTCTTAAATGAGGATACAATGGAAGATGATGATCTTAGTAACGAGGATTCGGATTTTGAATCTGAATCTGAATCTGAATCTGGGGAGGAAGAGGAGGAGGTAAAATTGTCTGAACCATCAAAGACTGCAATATATAATGCTGATGGTCTCCTTGATAAGCTTGAAGATATTAGCTGGCCGAAAAACGTGGAATGGATACACAGGCTATGTCTTGATATTGATCAAGAAAAAGAGGTGGATGTGAATGATGATCTAGCTAGAGAACTTGCATTCTATACACAGGCTTTCCAGGGGACGAGAATGGCCCTCGAGAAGTTCCAATCTTTAGGTCTCCCTTTTCTCAGGCCTTCAGACTATTATGCAGAGATGGTGAAGACAGATACTCACATGGGAAAAGTGAAAGGTCGGTTGCTGGCCGAACAGAGGAAGATGGAGGAAGCTGAGGAAAGAAGGAAGGCTAGAGAAGCAAAGAAGTTAGCTAAAGAGATTCAAGCTCAGAAGCTAAAGGAGAGGGCTAAGCAGAAGAAAGAGGAGATTGAATCGGTTAAGAAATGGAGGAAGCAGAGACAAAAGAGTGGTTTTGCTGGAGGTGATAAAGGTGGTGAGATGGAGTTGTCCTTTGAAGATGGAAAGGCGTTCGAGAGATCTGGTGGCAAGAAGAGGCCCGGGGTGTCTCCTGGCGATTGCTCGGGAGGGATGGCGAGACACAGAGACGGAGGAAAAGGGAAAAATCTGAAGAAAAAGAAAGATTTCAGAGATTCCAAGTTCGGATTTGGCGGGAGAAAAAGTTTGAAAAAACAGAACACGGCCGAGACAACAAATGACATTAGGGGATTCAACAACCACAGTTTGTTAAGCAACAAAAGAAGGAAGAGGTCATAG

mRNA sequence

ATGGGTGTATCGGATAAAGATGTGAAGTTCTTAAATGAGGATACAATGGAAGATGATGATCTTAGTAACGAGGATTCGGATTTTGAATCTGAATCTGAATCTGAATCTGGGGAGGAAGAGGAGGAGGTAAAATTGTCTGAACCATCAAAGACTGCAATATATAATGCTGATGGTCTCCTTGATAAGCTTGAAGATATTAGCTGGCCGAAAAACGTGGAATGGATACACAGGCTATGTCTTGATATTGATCAAGAAAAAGAGGTGGATGTGAATGATGATCTAGCTAGAGAACTTGCATTCTATACACAGGCTTTCCAGGGGACGAGAATGGCCCTCGAGAAGTTCCAATCTTTAGGTCTCCCTTTTCTCAGGCCTTCAGACTATTATGCAGAGATGGTGAAGACAGATACTCACATGGGAAAAGTGAAAGGTCGGTTGCTGGCCGAACAGAGGAAGATGGAGGAAGCTGAGGAAAGAAGGAAGGCTAGAGAAGCAAAGAAGTTAGCTAAAGAGATTCAAGCTCAGAAGCTAAAGGAGAGGGCTAAGCAGAAGAAAGAGGAGATTGAATCGGTTAAGAAATGGAGGAAGCAGAGACAAAAGAGTGGTTTTGCTGGAGGTGATAAAGGTGGTGAGATGGAGTTGTCCTTTGAAGATGGAAAGGCGTTCGAGAGATCTGGTGGCAAGAAGAGGCCCGGGGTGTCTCCTGGCGATTGCTCGGGAGGGATGGCGAGACACAGAGACGGAGGAAAAGGGAAAAATCTGAAGAAAAAGAAAGATTTCAGAGATTCCAAGTTCGGATTTGGCGGGAGAAAAAGTTTGAAAAAACAGAACACGGCCGAGACAACAAATGACATTAGGGGATTCAACAACCACAGTTTGTTAAGCAACAAAAGAAGGAAGAGGTCATAG

Coding sequence (CDS)

ATGGGTGTATCGGATAAAGATGTGAAGTTCTTAAATGAGGATACAATGGAAGATGATGATCTTAGTAACGAGGATTCGGATTTTGAATCTGAATCTGAATCTGAATCTGGGGAGGAAGAGGAGGAGGTAAAATTGTCTGAACCATCAAAGACTGCAATATATAATGCTGATGGTCTCCTTGATAAGCTTGAAGATATTAGCTGGCCGAAAAACGTGGAATGGATACACAGGCTATGTCTTGATATTGATCAAGAAAAAGAGGTGGATGTGAATGATGATCTAGCTAGAGAACTTGCATTCTATACACAGGCTTTCCAGGGGACGAGAATGGCCCTCGAGAAGTTCCAATCTTTAGGTCTCCCTTTTCTCAGGCCTTCAGACTATTATGCAGAGATGGTGAAGACAGATACTCACATGGGAAAAGTGAAAGGTCGGTTGCTGGCCGAACAGAGGAAGATGGAGGAAGCTGAGGAAAGAAGGAAGGCTAGAGAAGCAAAGAAGTTAGCTAAAGAGATTCAAGCTCAGAAGCTAAAGGAGAGGGCTAAGCAGAAGAAAGAGGAGATTGAATCGGTTAAGAAATGGAGGAAGCAGAGACAAAAGAGTGGTTTTGCTGGAGGTGATAAAGGTGGTGAGATGGAGTTGTCCTTTGAAGATGGAAAGGCGTTCGAGAGATCTGGTGGCAAGAAGAGGCCCGGGGTGTCTCCTGGCGATTGCTCGGGAGGGATGGCGAGACACAGAGACGGAGGAAAAGGGAAAAATCTGAAGAAAAAGAAAGATTTCAGAGATTCCAAGTTCGGATTTGGCGGGAGAAAAAGTTTGAAAAAACAGAACACGGCCGAGACAACAAATGACATTAGGGGATTCAACAACCACAGTTTGTTAAGCAACAAAAGAAGGAAGAGGTCATAG

Protein sequence

MGVSDKDVKFLNEDTMEDDDLSNEDSDFESESESESGEEEEEVKLSEPSKTAIYNADGLLDKLEDISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQAFQGTRMALEKFQSLGLPFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGFAGGDKGGEMELSFEDGKAFERSGGKKRPGVSPGDCSGGMARHRDGGKGKNLKKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNNHSLLSNKRRKRS

Homology

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BLAST of Cp4.1LG02g08770 vs. ExPASy Swiss-Prot
Match: Q9LUJ5 (Probable rRNA-processing protein EBP2 homolog OS=Arabidopsis thaliana OX=3702 GN=EBP2 PE=1 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 5.7e-84
Identity = 182/297 (61.28%), Postives = 228/297 (76.77%), Query Frame = 0


Query: 11  LNEDTMEDDDLSNEDSDFESESESES---GEEEEEV--KLSEPSKTAIYNADGLLDKLED 70
           L ED + DD+++  D D  ++SE+ES    + E E+  KL+EP+KTAIYN DGLLDKL+D
Sbjct: 3   LEEDIVSDDEMNMIDEDDATDSEAESLSDSDTENEITEKLAEPTKTAIYNRDGLLDKLQD 62

Query: 71  ISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQAFQGTRMALEKFQSLGLPFLRP 130
           ISWP++V+W H+L ++IDQ   VDVNDDLARE AFYTQA +GTR A  K   +G+ FLRP
Sbjct: 63  ISWPEDVDWTHKLTVEIDQGGAVDVNDDLARETAFYTQALEGTREAFGKLNEMGVNFLRP 122

Query: 131 SDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQAQKLKERAKQKK 190
           ++YYAEMVK+D HM KVK RLL E++++EE+EERRKAR+ K++AKE+Q+QK+KERAK+KK
Sbjct: 123 ANYYAEMVKSDVHMEKVKSRLLHEKKQIEESEERRKARDNKRMAKEVQSQKMKERAKEKK 182

Query: 191 EEIESVKKWRKQRQKSGFAGGDKGGEMELSFEDGKAFERSGGKKRPGVSPGDCSGGMARH 250
           + IESVKKWRKQRQ+SGF+  DK GE EL FE GK+F+R GGKKRPGVSPGD SGG  R 
Sbjct: 183 DNIESVKKWRKQRQQSGFS--DKAGEPELDFESGKSFQRGGGKKRPGVSPGDRSGGKGR- 242

Query: 251 RDGGKGKNLKKKKDFRDSKFGFGGRKSLKKQNTAETTNDIR-GFNNHSLLSNKRRKR 302
                 +   KK++FRDSKFG GGRK L KQNTAETTND + GF       NKR+KR
Sbjct: 243 ---PTSRMGNKKREFRDSKFGHGGRKGLSKQNTAETTNDFKGGFRGGKASGNKRQKR 293

[Close]

BLAST of Cp4.1LG02g08770 vs. ExPASy Swiss-Prot
Match: P36049 (rRNA-processing protein EBP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=EBP2 PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.4e-18
Identity = 91/306 (29.74%), Postives = 152/306 (49.67%), Query Frame = 0


Query: 12  NEDTMEDDDLSNEDSDFESESESESGEEEEE---VKLSEPS-----------KTAIYNAD 71
           +ED  E ++ S ED D  ++ ESE  EE+EE   V LS+             K  + N  
Sbjct: 140 SEDDSESENDSEEDEDVVAKEESEEKEEQEEEQDVPLSDVEFDSDADVVPHHKLTVNNTK 199

Query: 72  GLLDKLE--DISWPKNVEWIHR-LCLDIDQEKEV-DVNDDLARELAFYTQAFQGTRMALE 131
            +   LE   + W K+    H+ +  + + ++ + D+ DD  RELAFY Q+     +A +
Sbjct: 200 AMKHALERVQLPWKKHSFQEHQSVTSETNTDEHIKDIYDDTERELAFYKQSLDAVLVARD 259

Query: 132 KFQSLGLPFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQ 191
           + + L +PF RP DY+AEMVK+D HM K+KG+L+ E    +  EE R+ R+ KK  K++Q
Sbjct: 260 ELKRLKVPFKRPLDYFAEMVKSDEHMDKIKGKLIEEASDKKAREEARRQRQLKKFGKQVQ 319

Query: 192 AQKLKERAKQKKEEIESVKKWRKQRQKSGFAGGDKGGEMELSFEDGKAFERSGGKKRPGV 251
              L++R  +K+E +E +K  + +R+ +     +    +E   E GK F+R     RP  
Sbjct: 320 NATLQKRQLEKRETLEKIKSLKNKRKHNEIDHSEFNVGVEEEVE-GKRFDRG----RP-- 379

Query: 252 SPGDCSGGMARHRDGGKGKNLKKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNNHSL 300
                                  K+  +++K+G GG K  K++N A ++ D+ GF++  +
Sbjct: 380 ---------------------NGKRAAKNAKYGQGGMKRFKRKNDATSSADVSGFSSRKM 417

[Close]

BLAST of Cp4.1LG02g08770 vs. ExPASy Swiss-Prot
Match: Q9I8J6 (Probable rRNA-processing protein EBP2 OS=Xenopus laevis OX=8355 GN=ebna1bp2 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 9.2e-18
Identity = 87/296 (29.39%), Postives = 139/296 (46.96%), Query Frame = 0


Query: 17  EDDDLSNEDSDFESE--SESESGEEEEEVKLS-------EPSKTAIYNADGLLDKLEDIS 76
           ED+     DSDF++   ++ E  E   + KL        E  K    +A GL   L+D+ 
Sbjct: 5   EDESSPESDSDFDASELTDKELQEAFSQGKLKPGLNVVLEGKKKPFNDASGLKQSLKDLK 64

Query: 77  WPKNVEWIHRLCLDID--------------QEKEVDVNDDLARELAFYTQAFQGTRMALE 136
               + W+ RL + +D                 +++  DD  RE+ FY QA      +L 
Sbjct: 65  --NELPWVERLDVTVDPVVDTTGQNGQTDPNTSDINAEDDFQREMCFYRQAQAAVLYSLP 124

Query: 137 KFQSLGLPFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQ 196
           + + L +   RP DY+AEM KTD HM K++ +L  +Q  ME++E+ ++ R  +K  K++Q
Sbjct: 125 RLRKLKVATKRPDDYFAEMAKTDQHMQKIRHKLQLKQASMEKSEKAKQLRALRKYGKKVQ 184

Query: 197 AQKLKERAKQKKEEIESVKKWRKQRQKSGFAGGDKGGEMELSFEDGKAFERSGGKKRPGV 256
            + L++R K+K   +  +KK++            KG   +L F +        G + P  
Sbjct: 185 VEVLQKRQKEKSAMVTQIKKYQ------------KGLSDKLDFLE--------GDQTPKK 244

Query: 257 SPGDCSGGMARHRDGGKGKNL-KKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRGF 289
           +P    G  A      K KN    K+ ++D KFGFGG+K   K NT  + ND+ GF
Sbjct: 245 TPNKTGGSAAAQ----KAKNTPSAKRRYKDQKFGFGGKKKGSKGNTKGSYNDVSGF 274

[Close]

BLAST of Cp4.1LG02g08770 vs. ExPASy Swiss-Prot
Match: Q09958 (Probable rRNA-processing protein EBP2 homolog OS=Caenorhabditis elegans OX=6239 GN=C18A3.3 PE=1 SV=2)

HSP 1 Score: 88.6 bits (218), Expect = 1.3e-16
Identity = 94/294 (31.97%), Postives = 155/294 (52.72%), Query Frame = 0


Query: 3   VSDKDVKFLNEDTMEDDDLSNEDSDFESESESESGEEEEEVKLSEPSKTAIYNADG-LLD 62
           + +K ++ ++ + +E D    +D + E ++   +G  ++ + +    K  I N    + +
Sbjct: 38  IEEKPMEAMDIEEVESD---GDDDERELQAAFAAGLLKDGLNIQVAKKRPIINKSAEMKE 97

Query: 63  KLEDISWPKNVEWIHRLCL---DIDQEKEVDVNDDLARELAFYTQAFQGTRMALEKFQSL 122
           KL +I+  K++ W+  L +     + +K+V+ NDD  REL FY QA +  ++A  +  +L
Sbjct: 98  KLAEIT--KDLPWVETLEVVTPHSEMDKKVE-NDDFQRELNFYKQAEKAVQIAYPRLLNL 157

Query: 123 GLPFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQAQKLK 182
           G+  LRP+DYYAEM K+DTHM KV+ RLL  Q   E  E  R+ RE KK A ++Q + L 
Sbjct: 158 GIKVLRPTDYYAEMAKSDTHMQKVRKRLLGIQEMKERQEAFRRIREEKKFAVKVQKEVLA 217

Query: 183 ERAKQKKEEIESVKKWRK--QRQKSGFAGGDK--GGEMELSFEDGKAFERSGGKKRPGVS 242
            +  +KK   E+VKK +K  ++Q        K  G + +     G   +R GG+   G  
Sbjct: 218 AKNTEKKNLAEAVKKHKKGMKQQLEDMLNNVKRHGLDQDDDAPTGAFGDRLGGRGGAG-- 277

Query: 243 PGDCSGGMARHRDGGKGKNL-KKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRG 288
                GG  R   GG  +N  + K+  +  KFG+GG+K   K+N  E+ ND+ G
Sbjct: 278 ----RGGAGR---GGSMRNAGELKRKLKSDKFGYGGKKKGMKRNNKESFNDLFG 316

[Close]

BLAST of Cp4.1LG02g08770 vs. ExPASy Swiss-Prot
Match: Q9D903 (Probable rRNA-processing protein EBP2 OS=Mus musculus OX=10090 GN=Ebna1bp2 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 6.6e-16
Identity = 85/302 (28.15%), Postives = 146/302 (48.34%), Query Frame = 0


Query: 7   DVKFLNEDTMEDDDLSNEDSDFESESESESGEEEEEVKLSEPSKTAIYNADGLLDKLEDI 66
           D   L+E   E D     D + +        +    V L +P K A+ +  GL   L + 
Sbjct: 2   DTPPLSESDSESDACLASDQELQDAFSRGLLKPGLNVVLEKPKK-AVNDVSGLKQCLAE- 61

Query: 67  SWPKNVEWIHRLCLDI----------------DQEKEVDVNDDLARELAFYTQAFQGTRM 126
            + +++EW+ RL + +                DQ+K V+  DD  RE++FY QA      
Sbjct: 62  -FRRDLEWVERLDVTLGPVPEVSETQPTPQNQDQKKGVNPEDDFQREMSFYRQAQAAVLA 121

Query: 127 ALEKFQSLGLPFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAK 186
            L +   L +P  RP+DY+AEM K+D  M K++ +L  +Q  ME++E+ ++ R  +K  K
Sbjct: 122 VLPRLHQLQVPTKRPTDYFAEMAKSDQQMQKIRQKLQTKQAAMEKSEKAKQLRALRKYGK 181

Query: 187 EIQAQKLKERAKQKKEEIESVKKWRKQRQKSGFAGGDKGGEMELSFEDGKAFERSGGKKR 246
           ++Q + L++R ++K   + ++KK++K     GF+      +++    D K  ERS     
Sbjct: 182 KVQTEVLQKRQREKAHMMNAIKKYQK-----GFS-----DKLDFLEGDQKPVERSA---- 241

Query: 247 PGVSPGDCSGGMARHRDGGKGKNLKK----KKDFRDSKFGFGGRKSLKKQNTAETTNDIR 289
                          + GGKG+ + K    K+ +++ KFGFGG+K   K NT E+ +D+ 
Sbjct: 242 ---------------KAGGKGQQMSKGPNAKRRYKNQKFGFGGKKKGSKWNTKESYDDVS 271

[Close]

BLAST of Cp4.1LG02g08770 vs. NCBI nr
Match: XP_023522121.1 (probable rRNA-processing protein EBP2 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 563 bits (1450), Expect = 1.55e-201
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 0


Query: 1   MGVSDKDVKFLNEDTMEDDDLSNEDSDFESESESESGEEEEEVKLSEPSKTAIYNADGLL 60
           MGVSDKDVKFLNEDTMEDDDLSNEDSDFESESESESGEEEEEVKLSEPSKTAIYNADGLL
Sbjct: 1   MGVSDKDVKFLNEDTMEDDDLSNEDSDFESESESESGEEEEEVKLSEPSKTAIYNADGLL 60

Query: 61  DKLEDISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQAFQGTRMALEKFQSLGL 120
           DKLEDISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQAFQGTRMALEKFQSLGL
Sbjct: 61  DKLEDISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQAFQGTRMALEKFQSLGL 120

Query: 121 PFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQAQKLKER 180
           PFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQAQKLKER
Sbjct: 121 PFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQAQKLKER 180

Query: 181 AKQKKEEIESVKKWRKQRQKSGFAGGDKGGEMELSFEDGKAFERSGGKKRPGVSPGDCSG 240
           AKQKKEEIESVKKWRKQRQKSGFAGGDKGGEMELSFEDGKAFERSGGKKRPGVSPGDCSG
Sbjct: 181 AKQKKEEIESVKKWRKQRQKSGFAGGDKGGEMELSFEDGKAFERSGGKKRPGVSPGDCSG 240

Query: 241 GMARHRDGGKGKNLKKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNNHSLLSNKRRK 300
           GMARHRDGGKGKNLKKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNNHSLLSNKRRK
Sbjct: 241 GMARHRDGGKGKNLKKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNNHSLLSNKRRK 300

Query: 301 RS 302
           RS
Sbjct: 301 RS 302

[Close]

BLAST of Cp4.1LG02g08770 vs. NCBI nr
Match: XP_022981565.1 (probable rRNA-processing protein EBP2 homolog [Cucurbita maxima])

HSP 1 Score: 536 bits (1381), Expect = 4.70e-191
Identity = 292/302 (96.69%), Postives = 295/302 (97.68%), Query Frame = 0


Query: 1   MGVSDKDVKFLNEDTMEDDDLSNEDSDFESESESESGEEEEEVKLSEPSKTAIYNADGLL 60
           MGVSDKD +FLNEDTME+DDLSNEDSDFESESES  GEEEEEVKLSEPSKTAIYNADGLL
Sbjct: 1   MGVSDKDARFLNEDTMENDDLSNEDSDFESESES--GEEEEEVKLSEPSKTAIYNADGLL 60

Query: 61  DKLEDISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQAFQGTRMALEKFQSLGL 120
           DKLEDISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQA QGTRMALEKFQSLGL
Sbjct: 61  DKLEDISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGL 120

Query: 121 PFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQAQKLKER 180
           PFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQAQKLKER
Sbjct: 121 PFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQAQKLKER 180

Query: 181 AKQKKEEIESVKKWRKQRQKSGFAGGDKGGEMELSFEDGKAFERSGGKKRPGVSPGDCSG 240
           AKQKKEEIESVKKWRKQRQKSGFAGGDKGGEMELSFEDGKAFERSGGKKRPGVSPGD SG
Sbjct: 181 AKQKKEEIESVKKWRKQRQKSGFAGGDKGGEMELSFEDGKAFERSGGKKRPGVSPGDRSG 240

Query: 241 GMARHRDGGKGKNLKKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNNHSLLSNKRRK 300
           G ARHR+GGKGKNLKKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNN SLLSNKRRK
Sbjct: 241 GKARHRNGGKGKNLKKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNNDSLLSNKRRK 300

Query: 301 RS 302
           RS
Sbjct: 301 RS 300

[Close]

BLAST of Cp4.1LG02g08770 vs. NCBI nr
Match: KAG7037255.1 (putative rRNA-processing protein EBP2-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 536 bits (1380), Expect = 6.20e-191
Identity = 291/302 (96.36%), Postives = 293/302 (97.02%), Query Frame = 0


Query: 1   MGVSDKDVKFLNEDTMEDDDLSNEDSDFESESESESGEEEEEVKLSEPSKTAIYNADGLL 60
           MGVSDKD +FLNEDTMEDDDLSNEDSDFESES    GEEEEEVKLSEPSKTAIYNADGLL
Sbjct: 1   MGVSDKDARFLNEDTMEDDDLSNEDSDFESES----GEEEEEVKLSEPSKTAIYNADGLL 60

Query: 61  DKLEDISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQAFQGTRMALEKFQSLGL 120
           DKLEDISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQA QGTRMALEKFQSLGL
Sbjct: 61  DKLEDISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGL 120

Query: 121 PFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQAQKLKER 180
           PFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQAQKLKER
Sbjct: 121 PFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQAQKLKER 180

Query: 181 AKQKKEEIESVKKWRKQRQKSGFAGGDKGGEMELSFEDGKAFERSGGKKRPGVSPGDCSG 240
           AKQKKEEIESVKKWRKQRQKSGFAGGDKGG+MELSFEDGKAFERSGGKKRPGVSPGD SG
Sbjct: 181 AKQKKEEIESVKKWRKQRQKSGFAGGDKGGDMELSFEDGKAFERSGGKKRPGVSPGDRSG 240

Query: 241 GMARHRDGGKGKNLKKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNNHSLLSNKRRK 300
           G ARHRDGGKGKNLKKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNN SLLSNKRRK
Sbjct: 241 GKARHRDGGKGKNLKKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNNDSLLSNKRRK 298

Query: 301 RS 302
           RS
Sbjct: 301 RS 298

[Close]

BLAST of Cp4.1LG02g08770 vs. NCBI nr
Match: XP_022926294.1 (probable rRNA-processing protein EBP2 homolog [Cucurbita moschata])

HSP 1 Score: 536 bits (1381), Expect = 6.31e-191
Identity = 293/308 (95.13%), Postives = 296/308 (96.10%), Query Frame = 0


Query: 1   MGVSDKDVKFLNEDTMEDDDLSNEDSDF------ESESESESGEEEEEVKLSEPSKTAIY 60
           MGVSDKD +FLNEDTMEDDDL NEDSDF      ESESESESGEEEEEVKLSEPSKTAIY
Sbjct: 1   MGVSDKDARFLNEDTMEDDDLGNEDSDFGSESESESESESESGEEEEEVKLSEPSKTAIY 60

Query: 61  NADGLLDKLEDISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQAFQGTRMALEK 120
           NADGLLDKLEDISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQA QGTRMALEK
Sbjct: 61  NADGLLDKLEDISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEK 120

Query: 121 FQSLGLPFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQA 180
           FQSLGLPFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQA
Sbjct: 121 FQSLGLPFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQA 180

Query: 181 QKLKERAKQKKEEIESVKKWRKQRQKSGFAGGDKGGEMELSFEDGKAFERSGGKKRPGVS 240
           QKLKERAKQKKEEIESVKKWRKQRQKSGFAGGDKGG+MELSFEDGKAFERSGGKKRPGVS
Sbjct: 181 QKLKERAKQKKEEIESVKKWRKQRQKSGFAGGDKGGDMELSFEDGKAFERSGGKKRPGVS 240

Query: 241 PGDCSGGMARHRDGGKGKNLKKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNNHSLL 300
           PGD SGG ARHRDGGKGKNLKKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRGFN+ SLL
Sbjct: 241 PGDRSGGKARHRDGGKGKNLKKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNSDSLL 300

Query: 301 SNKRRKRS 302
           SNKRRKRS
Sbjct: 301 SNKRRKRS 308

[Close]

BLAST of Cp4.1LG02g08770 vs. NCBI nr
Match: KAG6607653.1 (putative rRNA-processing protein EBP2-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 531 bits (1369), Expect = 2.94e-189
Identity = 289/302 (95.70%), Postives = 292/302 (96.69%), Query Frame = 0


Query: 1   MGVSDKDVKFLNEDTMEDDDLSNEDSDFESESESESGEEEEEVKLSEPSKTAIYNADGLL 60
           MGVSDKD +FLNEDTMEDDDLSNEDSDFESES    GEEEEEVKLSEPSKTAIYNADGLL
Sbjct: 1   MGVSDKDARFLNEDTMEDDDLSNEDSDFESES----GEEEEEVKLSEPSKTAIYNADGLL 60

Query: 61  DKLEDISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQAFQGTRMALEKFQSLGL 120
           DKLEDISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQA QGTRMALEKFQSLGL
Sbjct: 61  DKLEDISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGL 120

Query: 121 PFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQAQKLKER 180
           PFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQAQKLKER
Sbjct: 121 PFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQAQKLKER 180

Query: 181 AKQKKEEIESVKKWRKQRQKSGFAGGDKGGEMELSFEDGKAFERSGGKKRPGVSPGDCSG 240
           AKQKKEEIESVKKWRKQRQKSGFAGGDKGG+MELSFEDGKAF+RSGGKKRPGVSPGD SG
Sbjct: 181 AKQKKEEIESVKKWRKQRQKSGFAGGDKGGDMELSFEDGKAFKRSGGKKRPGVSPGDRSG 240

Query: 241 GMARHRDGGKGKNLKKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNNHSLLSNKRRK 300
           G ARHRDGGKGKNLKKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNN SLLSNK RK
Sbjct: 241 GKARHRDGGKGKNLKKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNNDSLLSNKGRK 298

Query: 301 RS 302
           RS
Sbjct: 301 RS 298

[Close]

BLAST of Cp4.1LG02g08770 vs. ExPASy TrEMBL
Match: A0A6J1IZU9 (probable rRNA-processing protein EBP2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111480644 PE=3 SV=1)

HSP 1 Score: 536 bits (1381), Expect = 2.28e-191
Identity = 292/302 (96.69%), Postives = 295/302 (97.68%), Query Frame = 0


Query: 1   MGVSDKDVKFLNEDTMEDDDLSNEDSDFESESESESGEEEEEVKLSEPSKTAIYNADGLL 60
           MGVSDKD +FLNEDTME+DDLSNEDSDFESESES  GEEEEEVKLSEPSKTAIYNADGLL
Sbjct: 1   MGVSDKDARFLNEDTMENDDLSNEDSDFESESES--GEEEEEVKLSEPSKTAIYNADGLL 60

Query: 61  DKLEDISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQAFQGTRMALEKFQSLGL 120
           DKLEDISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQA QGTRMALEKFQSLGL
Sbjct: 61  DKLEDISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGL 120

Query: 121 PFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQAQKLKER 180
           PFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQAQKLKER
Sbjct: 121 PFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQAQKLKER 180

Query: 181 AKQKKEEIESVKKWRKQRQKSGFAGGDKGGEMELSFEDGKAFERSGGKKRPGVSPGDCSG 240
           AKQKKEEIESVKKWRKQRQKSGFAGGDKGGEMELSFEDGKAFERSGGKKRPGVSPGD SG
Sbjct: 181 AKQKKEEIESVKKWRKQRQKSGFAGGDKGGEMELSFEDGKAFERSGGKKRPGVSPGDRSG 240

Query: 241 GMARHRDGGKGKNLKKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNNHSLLSNKRRK 300
           G ARHR+GGKGKNLKKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNN SLLSNKRRK
Sbjct: 241 GKARHRNGGKGKNLKKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNNDSLLSNKRRK 300

Query: 301 RS 302
           RS
Sbjct: 301 RS 300

[Close]

BLAST of Cp4.1LG02g08770 vs. ExPASy TrEMBL
Match: A0A6J1EEP4 (probable rRNA-processing protein EBP2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111433474 PE=3 SV=1)

HSP 1 Score: 536 bits (1381), Expect = 3.05e-191
Identity = 293/308 (95.13%), Postives = 296/308 (96.10%), Query Frame = 0


Query: 1   MGVSDKDVKFLNEDTMEDDDLSNEDSDF------ESESESESGEEEEEVKLSEPSKTAIY 60
           MGVSDKD +FLNEDTMEDDDL NEDSDF      ESESESESGEEEEEVKLSEPSKTAIY
Sbjct: 1   MGVSDKDARFLNEDTMEDDDLGNEDSDFGSESESESESESESGEEEEEVKLSEPSKTAIY 60

Query: 61  NADGLLDKLEDISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQAFQGTRMALEK 120
           NADGLLDKLEDISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQA QGTRMALEK
Sbjct: 61  NADGLLDKLEDISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEK 120

Query: 121 FQSLGLPFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQA 180
           FQSLGLPFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQA
Sbjct: 121 FQSLGLPFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQA 180

Query: 181 QKLKERAKQKKEEIESVKKWRKQRQKSGFAGGDKGGEMELSFEDGKAFERSGGKKRPGVS 240
           QKLKERAKQKKEEIESVKKWRKQRQKSGFAGGDKGG+MELSFEDGKAFERSGGKKRPGVS
Sbjct: 181 QKLKERAKQKKEEIESVKKWRKQRQKSGFAGGDKGGDMELSFEDGKAFERSGGKKRPGVS 240

Query: 241 PGDCSGGMARHRDGGKGKNLKKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNNHSLL 300
           PGD SGG ARHRDGGKGKNLKKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRGFN+ SLL
Sbjct: 241 PGDRSGGKARHRDGGKGKNLKKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNSDSLL 300

Query: 301 SNKRRKRS 302
           SNKRRKRS
Sbjct: 301 SNKRRKRS 308

[Close]

BLAST of Cp4.1LG02g08770 vs. ExPASy TrEMBL
Match: A0A5D3DB33 (Putative rRNA-processing protein EBP2-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G001370 PE=3 SV=1)

HSP 1 Score: 483 bits (1243), Expect = 4.27e-170
Identity = 268/306 (87.58%), Postives = 283/306 (92.48%), Query Frame = 0


Query: 1   MGVSDKDVKFLNEDTMEDDDLSNEDSDFESESES--ESGEEEEEVKLSEPSKTAIYNADG 60
           MGVS KD +FLNEDT+EDDDLS+EDS+FESESES  ES EEEE+V+LSEPSK AIYNADG
Sbjct: 10  MGVSIKDAEFLNEDTVEDDDLSSEDSEFESESESGSESEEEEEDVELSEPSKNAIYNADG 69

Query: 61  LLDKLEDISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQAFQGTRMALEKFQSL 120
           LLDKL DISWP+NVEWIH+L  DIDQEKEVDVNDDLARELAFYTQA QGTRMALEKFQSL
Sbjct: 70  LLDKLGDISWPENVEWIHKLTFDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSL 129

Query: 121 GLPFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQAQKLK 180
           GLPFLRPSDYYAEMVKTDTHM KVKGRLL+EQRKMEEAEERRKAREAKKLAKEIQAQK K
Sbjct: 130 GLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMEEAEERRKAREAKKLAKEIQAQKQK 189

Query: 181 ERAKQKKEEIESVKKWRKQRQKSGFAGGDKGGEMELSFEDGKAFERSGGKKRPGVSPGDC 240
           ERAKQKKEEIESVKKWRKQRQK+ FAGGDKGG+M+ SFEDGK FERSGGKKRPGVSPGD 
Sbjct: 190 ERAKQKKEEIESVKKWRKQRQKNNFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVSPGDR 249

Query: 241 SGGMARHRDGG--KGKNLKKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNNHSLLSN 300
           SGG ARH  GG  KGKNLKKK+DFRDSKFGFGGRKSLKKQNTAETTNDIRGFNN SL +N
Sbjct: 250 SGGKARHGGGGGGKGKNLKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNNGSLSNN 309

Query: 301 KRRKRS 302
           KRRK+S
Sbjct: 310 KRRKKS 315

[Close]

BLAST of Cp4.1LG02g08770 vs. ExPASy TrEMBL
Match: A0A1S3CT69 (probable rRNA-processing protein EBP2 homolog OS=Cucumis melo OX=3656 GN=LOC103504670 PE=3 SV=1)

HSP 1 Score: 482 bits (1241), Expect = 6.22e-170
Identity = 268/306 (87.58%), Postives = 282/306 (92.16%), Query Frame = 0


Query: 1   MGVSDKDVKFLNEDTMEDDDLSNEDSDFESESES--ESGEEEEEVKLSEPSKTAIYNADG 60
           MGVS KD  FLNEDT+EDDDLS+EDS+FESESES  ES EEEE+V+LSEPSK AIYNADG
Sbjct: 1   MGVSIKDADFLNEDTVEDDDLSSEDSEFESESESGSESEEEEEDVELSEPSKNAIYNADG 60

Query: 61  LLDKLEDISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQAFQGTRMALEKFQSL 120
           LLDKL DISWP+NVEWIH+L  DIDQEKEVDVNDDLARELAFYTQA QGTRMALEKFQSL
Sbjct: 61  LLDKLGDISWPENVEWIHKLTFDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSL 120

Query: 121 GLPFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQAQKLK 180
           GLPFLRPSDYYAEMVKTDTHM KVKGRLL+EQRKMEEAEERRKAREAKKLAKEIQAQK K
Sbjct: 121 GLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMEEAEERRKAREAKKLAKEIQAQKQK 180

Query: 181 ERAKQKKEEIESVKKWRKQRQKSGFAGGDKGGEMELSFEDGKAFERSGGKKRPGVSPGDC 240
           ERAKQKKEEIESVKKWRKQRQK+ FAGGDKGG+M+ SFEDGK FERSGGKKRPGVSPGD 
Sbjct: 181 ERAKQKKEEIESVKKWRKQRQKNNFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVSPGDR 240

Query: 241 SGGMARHRDGG--KGKNLKKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNNHSLLSN 300
           SGG ARH  GG  KGKNLKKK+DFRDSKFGFGGRKSLKKQNTAETTNDIRGFNN SL +N
Sbjct: 241 SGGKARHGGGGGGKGKNLKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNNGSLSNN 300

Query: 301 KRRKRS 302
           KRRK+S
Sbjct: 301 KRRKKS 306

[Close]

BLAST of Cp4.1LG02g08770 vs. ExPASy TrEMBL
Match: A0A6J1H264 (probable rRNA-processing protein EBP2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111459763 PE=3 SV=1)

HSP 1 Score: 472 bits (1215), Expect = 4.09e-166
Identity = 266/302 (88.08%), Postives = 278/302 (92.05%), Query Frame = 0


Query: 1   MGVSDKDVKFLNEDTMEDDDLSNEDSDFESESESESGEEEEEVKLSEPSKTAIYNADGLL 60
           MGVSD+   FLNEDTMEDDDL +EDSDF SESESES EEEE+VKLSEPSK AIYNADGLL
Sbjct: 1   MGVSDEKDSFLNEDTMEDDDLDSEDSDFGSESESES-EEEEDVKLSEPSKNAIYNADGLL 60

Query: 61  DKLEDISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQAFQGTRMALEKFQSLGL 120
           DKL DISWP+NV WIH+L LDIDQEKEVDVNDDLARELAFYTQA QGTRMALEKFQSLGL
Sbjct: 61  DKLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGL 120

Query: 121 PFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQAQKLKER 180
           PFLRP DYYAEMVKTDTHM KVKGRLL EQ+KMEEAEERRKAREAKKLAKEIQAQKLKER
Sbjct: 121 PFLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKER 180

Query: 181 AKQKKEEIESVKKWRKQRQKSGFAGGDKGGEMELSFEDGKAFERSGGKKRPGVSPGDCSG 240
           AKQKKEEIESVKKWRKQRQKSGF+  DKGGEM+LSFEDGKAF+RSGGKKRPGVSPGD SG
Sbjct: 181 AKQKKEEIESVKKWRKQRQKSGFS--DKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSG 240

Query: 241 GMARHRDGGKGKNLKKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNNHSLLSNKRRK 300
           G ARH  GGKGKN KK+ DFRDSKFGFGGRKS+KKQNTAETTNDIRGFNN SL SNKRRK
Sbjct: 241 GKARHGGGGKGKNPKKR-DFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRK 298

Query: 301 RS 302
           +S
Sbjct: 301 KS 298

[Close]

BLAST of Cp4.1LG02g08770 vs. TAIR 10
Match: AT3G22660.1 (rRNA processing protein-related )

HSP 1 Score: 312.4 bits (799), Expect = 4.0e-85
Identity = 182/297 (61.28%), Postives = 228/297 (76.77%), Query Frame = 0


Query: 11  LNEDTMEDDDLSNEDSDFESESESES---GEEEEEV--KLSEPSKTAIYNADGLLDKLED 70
           L ED + DD+++  D D  ++SE+ES    + E E+  KL+EP+KTAIYN DGLLDKL+D
Sbjct: 3   LEEDIVSDDEMNMIDEDDATDSEAESLSDSDTENEITEKLAEPTKTAIYNRDGLLDKLQD 62

Query: 71  ISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQAFQGTRMALEKFQSLGLPFLRP 130
           ISWP++V+W H+L ++IDQ   VDVNDDLARE AFYTQA +GTR A  K   +G+ FLRP
Sbjct: 63  ISWPEDVDWTHKLTVEIDQGGAVDVNDDLARETAFYTQALEGTREAFGKLNEMGVNFLRP 122

Query: 131 SDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQAQKLKERAKQKK 190
           ++YYAEMVK+D HM KVK RLL E++++EE+EERRKAR+ K++AKE+Q+QK+KERAK+KK
Sbjct: 123 ANYYAEMVKSDVHMEKVKSRLLHEKKQIEESEERRKARDNKRMAKEVQSQKMKERAKEKK 182

Query: 191 EEIESVKKWRKQRQKSGFAGGDKGGEMELSFEDGKAFERSGGKKRPGVSPGDCSGGMARH 250
           + IESVKKWRKQRQ+SGF+  DK GE EL FE GK+F+R GGKKRPGVSPGD SGG  R 
Sbjct: 183 DNIESVKKWRKQRQQSGFS--DKAGEPELDFESGKSFQRGGGKKRPGVSPGDRSGGKGR- 242

Query: 251 RDGGKGKNLKKKKDFRDSKFGFGGRKSLKKQNTAETTNDIR-GFNNHSLLSNKRRKR 302
                 +   KK++FRDSKFG GGRK L KQNTAETTND + GF       NKR+KR
Sbjct: 243 ---PTSRMGNKKREFRDSKFGHGGRKGLSKQNTAETTNDFKGGFRGGKASGNKRQKR 293

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g08770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUJ5	5.7e-84	61.28	Probable rRNA-processing protein EBP2 homolog OS=Arabidopsis thaliana OX=3702 GN...	[more]
P36049	1.4e-18	29.74	rRNA-processing protein EBP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S...	[more]
Q9I8J6	9.2e-18	29.39	Probable rRNA-processing protein EBP2 OS=Xenopus laevis OX=8355 GN=ebna1bp2 PE=2...	[more]
Q09958	1.3e-16	31.97	Probable rRNA-processing protein EBP2 homolog OS=Caenorhabditis elegans OX=6239 ...	[more]
Q9D903	6.6e-16	28.15	Probable rRNA-processing protein EBP2 OS=Mus musculus OX=10090 GN=Ebna1bp2 PE=2 ...	[more]

BLAST of Cp4.1LG02g08770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023522121.1	1.55e-201	100.00	probable rRNA-processing protein EBP2 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022981565.1	4.70e-191	96.69	probable rRNA-processing protein EBP2 homolog [Cucurbita maxima]	[more]
KAG7037255.1	6.20e-191	96.36	putative rRNA-processing protein EBP2-like protein, partial [Cucurbita argyrospe...	[more]
XP_022926294.1	6.31e-191	95.13	probable rRNA-processing protein EBP2 homolog [Cucurbita moschata]	[more]
KAG6607653.1	2.94e-189	95.70	putative rRNA-processing protein EBP2-like protein, partial [Cucurbita argyrospe...	[more]

BLAST of Cp4.1LG02g08770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IZU9	2.28e-191	96.69	probable rRNA-processing protein EBP2 homolog OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1EEP4	3.05e-191	95.13	probable rRNA-processing protein EBP2 homolog OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A5D3DB33	4.27e-170	87.58	Putative rRNA-processing protein EBP2-like protein OS=Cucumis melo var. makuwa O...	[more]
A0A1S3CT69	6.22e-170	87.58	probable rRNA-processing protein EBP2 homolog OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
A0A6J1H264	4.09e-166	88.08	probable rRNA-processing protein EBP2 homolog OS=Cucurbita moschata OX=3662 GN=L...	[more]

BLAST of Cp4.1LG02g08770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22660.1	4.0e-85	61.28	rRNA processing protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 290..302
None	No IPR available	COILS	Coil	Coil	coord: 139..194
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..227
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..302
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 243..269
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 274..292
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..202
None	No IPR available	PANTHER	PTHR13028:SF2	BNAA01G24550D PROTEIN	coord: 23..301
IPR008610	Eukaryotic rRNA processing	PFAM	PF05890	Ebp2	coord: 25..294 e-value: 7.4E-73 score: 245.4
IPR008610	Eukaryotic rRNA processing	PANTHER	PTHR13028	RRNA PROCESSING PROTEIN EBNA1-BINDING PROTEIN-RELATED	coord: 23..301

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g08770.1	Cp4.1LG02g08770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042273	ribosomal large subunit biogenesis
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0034399	nuclear periphery
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0030687	preribosome, large subunit precursor