Cp4.1LG02g08610 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGAAGATGGAAGAGCATGAGCCGCCGCAGCAGCAAATGAGGCGGGAAACAGAAGAAGACAAGGGTTCGGTGGAAGAACTGCTGCCACTGGAGAGCAGTCCTTACGTGAAATACAAGGACTTGGAGGACTACAAAAACAAGGGGTATGGGGTGGAGGGCCATATTGAGCCCAAGCCCATTCAGGGCGGCGGCACCGATGCCCCCACCTTGTCCGGCAGCGGCTTCCCAGAGGTGGCTCCGGCCTCCATTGACGCCGTCACCAGACAAGGCCTTATCCACTGA ATGTGGAAGATGGAAGAGCATGAGCCGCCGCAGCAGCAAATGAGGCGGGAAACAGAAGAAGACAAGGGTTCGGTGGAAGAACTGCTGCCACTGGAGAGCAGTCCTTACGTGAAATACAAGGACTTGGAGGACTACAAAAACAAGGGGTATGGGGTGGAGGGCCATATTGAGCCCAAGCCCATTCAGGGCGGCGGCACCGATGCCCCCACCTTGTCCGGCAGCGGCTTCCCAGAGGTGGCTCCGGCCTCCATTGACGCCGTCACCAGACAAGGCCTTATCCACTGA ATGTGGAAGATGGAAGAGCATGAGCCGCCGCAGCAGCAAATGAGGCGGGAAACAGAAGAAGACAAGGGTTCGGTGGAAGAACTGCTGCCACTGGAGAGCAGTCCTTACGTGAAATACAAGGACTTGGAGGACTACAAAAACAAGGGGTATGGGGTGGAGGGCCATATTGAGCCCAAGCCCATTCAGGGCGGCGGCACCGATGCCCCCACCTTGTCCGGCAGCGGCTTCCCAGAGGTGGCTCCGGCCTCCATTGACGCCGTCACCAGACAAGGCCTTATCCACTGA MWKMEEHEPPQQQMRRETEEDKGSVEELLPLESSPYVKYKDLEDYKNKGYGVEGHIEPKPIQGGGTDAPTLSGSGFPEVAPASIDAVTRQGLIH Homology
BLAST of Cp4.1LG02g08610 vs. NCBI nr
Match: KAG6608652.1 (hypothetical protein SDJN03_01994, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037969.1 hypothetical protein SDJN02_01602, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 193 bits (490), Expect = 5.18e-62 Identity = 93/94 (98.94%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g08610 vs. NCBI nr
Match: XP_023535424.1 (uncharacterized protein LOC111796868 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 136 bits (343), Expect = 1.33e-39 Identity = 69/89 (77.53%), Postives = 75/89 (84.27%), Query Frame = 0
BLAST of Cp4.1LG02g08610 vs. NCBI nr
Match: XP_022937316.1 (uncharacterized protein LOC111443639 [Cucurbita moschata] >KAG6591201.1 hypothetical protein SDJN03_13547, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024086.1 hypothetical protein SDJN02_12899, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 136 bits (342), Expect = 1.89e-39 Identity = 69/89 (77.53%), Postives = 75/89 (84.27%), Query Frame = 0
BLAST of Cp4.1LG02g08610 vs. NCBI nr
Match: KAA0064662.1 (late embryogenesis abundant protein group 8 protein [Cucumis melo var. makuwa] >TYK19929.1 late embryogenesis abundant protein group 8 protein [Cucumis melo var. makuwa]) HSP 1 Score: 133 bits (334), Expect = 2.71e-38 Identity = 60/75 (80.00%), Postives = 67/75 (89.33%), Query Frame = 0
BLAST of Cp4.1LG02g08610 vs. NCBI nr
Match: KAE8649966.1 (hypothetical protein Csa_012992 [Cucumis sativus]) HSP 1 Score: 127 bits (319), Expect = 5.72e-36 Identity = 59/75 (78.67%), Postives = 65/75 (86.67%), Query Frame = 0
BLAST of Cp4.1LG02g08610 vs. ExPASy TrEMBL
Match: A0A6J1FA12 (uncharacterized protein LOC111443639 OS=Cucurbita moschata OX=3662 GN=LOC111443639 PE=4 SV=1) HSP 1 Score: 136 bits (342), Expect = 9.17e-40 Identity = 69/89 (77.53%), Postives = 75/89 (84.27%), Query Frame = 0
BLAST of Cp4.1LG02g08610 vs. ExPASy TrEMBL
Match: A0A5A7V8I8 (Late embryogenesis abundant protein group 8 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00410 PE=4 SV=1) HSP 1 Score: 133 bits (334), Expect = 1.31e-38 Identity = 60/75 (80.00%), Postives = 67/75 (89.33%), Query Frame = 0
BLAST of Cp4.1LG02g08610 vs. ExPASy TrEMBL
Match: A0A6J1C2A9 (uncharacterized protein LOC111007621 OS=Momordica charantia OX=3673 GN=LOC111007621 PE=4 SV=1) HSP 1 Score: 127 bits (318), Expect = 5.29e-36 Identity = 62/87 (71.26%), Postives = 71/87 (81.61%), Query Frame = 0
BLAST of Cp4.1LG02g08610 vs. ExPASy TrEMBL
Match: A0A0A0L5Y6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G664380 PE=4 SV=1) HSP 1 Score: 127 bits (319), Expect = 1.86e-35 Identity = 59/75 (78.67%), Postives = 65/75 (86.67%), Query Frame = 0
BLAST of Cp4.1LG02g08610 vs. ExPASy TrEMBL
Match: A0A438ET15 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_005747 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 1.05e-22 Identity = 46/87 (52.87%), Postives = 64/87 (73.56%), Query Frame = 0
BLAST of Cp4.1LG02g08610 vs. TAIR 10
Match: AT2G33690.1 (Late embryogenesis abundant protein, group 6 ) HSP 1 Score: 69.3 bits (168), Expect = 1.8e-12 Identity = 35/70 (50.00%), Postives = 47/70 (67.14%), Query Frame = 0
BLAST of Cp4.1LG02g08610 vs. TAIR 10
Match: AT2G23110.1 (Late embryogenesis abundant protein, group 6 ) HSP 1 Score: 59.3 bits (142), Expect = 1.9e-09 Identity = 39/96 (40.62%), Postives = 56/96 (58.33%), Query Frame = 0
BLAST of Cp4.1LG02g08610 vs. TAIR 10
Match: AT2G23110.2 (Late embryogenesis abundant protein, group 6 ) HSP 1 Score: 59.3 bits (142), Expect = 1.9e-09 Identity = 39/96 (40.62%), Postives = 56/96 (58.33%), Query Frame = 0
BLAST of Cp4.1LG02g08610 vs. TAIR 10
Match: AT2G23120.1 (Late embryogenesis abundant protein, group 6 ) HSP 1 Score: 48.9 bits (115), Expect = 2.6e-06 Identity = 31/59 (52.54%), Postives = 38/59 (64.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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