Cp4.1LG02g08550 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAAGTGAAAGATATTATTTATCAAATTCCGCCAAGCGTTTGTGGATAGGGATATAATGTGGGCGCTTTACGAACACTTGCTCTGCGTAGTTCAACCGCCATGGCAGTGGCCATAACTAAGAGGTTGGATTCTTGTCCCATTCATCGCCTTCTTCCTCAAATTCGTTCACAATCTACGGCCAACAGAAGAGAAAATGCTAGCCAAGAATTGTTTTCTCTTCCAATTTCAAGAAGGTCTGTAATTTTGATCTCCTCGCTACCTCTCGCTCTTGTTTCCGTATCTCCGTCGTCCGAGGCAAGAGAGAGAAGGAGCAGGAAGACTATTCCTCTCGAGGACTATCTCACCAGCCGTTAGTAGTCTCAATCCTTCATGTATCGTTATCTTCTGAATTTCCTTTTAATACTTCAAATTGGTTGAAAATCCTGAAATCTTGATTAGTAATTACGACCTATTCTTCAAATTCTGTATCTACATTTTATAATCAACCGAAATGAAGTGGGAGTTTTGTTCGTTACGTGTTGAGCTTCTCGTGGAGTGTACAATTCTGTTTCCAGGACTTAGAGGGATCTGTTGTGTTTATTGATAACAAATTTAAAAATAAAAAATAAAAAACCCGTCGAAATCTCACTTTAGTGGTTGGAGGATCTGGATTATGAGGAACATTTCTATGCAGCATTTTCTTTGATTCACATTGGCGATGACATTTTGATTGCAGCCAATGGACTGAAGTACTATGATATCGAGGAGGGAAAGGGTCCTGTGGCTGAGAAGGGTTCCACAGTACAGGTAATCTGTTTGGGACATTTTCAGAGCTGTGTTTGCCTGTCTTTGAATTTTAACTTTTCTCTGTATTAGCTCTCTATTACAGGTTCACTTTGATTGCCTCTATAGAGGGATTACAGCTGTGTCAAGTCGAGAATCTAAACTCTTGGCTGGAAATCGTATAATCGCCCAGGTTCTTGAAATGTGAACTTGATTTCGTTCATCAGTTGTTATCGAAAAAATGAGTGTGTACAAATGTGATGTTTAATATTGAAACTACATCATAGGATTAAATTTTCTTTAGTCAACAACTTCAGCTTTTAGGTCAATTCTAGTAACTAAGCGTCTGGATGTAATCTAAAATTCATCTTTATTAGTTAGAGAATTCAATTTCTAATGTATGTTGACCCATGGTTTGATCAGCCTTATGAGTTCAAAGTAGGAGCCCCTCCCGGGAAGGAGAGGAAACGTGATTTTGTGGACAATCCAAATGGTCTGTTTTCAGCACAGGCTGCACCTAAACCCCCACCAGCAATGTACTCCATAACTGAAGGGATGAAAGTTGGGGGAAAGGTAAGTGCATTCTTCTATTCCAAACTTGCACAAGCACATGCTTGATTTGACTGTAATCTTCTTCTTCCCCATTATATTCTCTCAAGTCTTACGTTTTATTTTTGCGAGGATTTCTTTGACTTCATTTTCCTTCTTTGTGCAGCGAACGGTGATTGTTCCCCCTGAGGCTGGATATGGTCAAAAGGGAATGAATGAAATCCCAGTAAGTCCCTAAATTTCAGTTGTAGATATTATCGAAATCTCGAGTGTGATATTTTTCCATTACATAAAGTAAGTCCATCATTTGCCTTTTTATTATGTTTGACTTTTTGACCCATCAGCTATTTTTGAAATTTAGTAACATTTACATGTGAATGCATGAAAACTCGGGTCTAAAAAGTTAGGCCCTGAATTTAAGTTGTAAATGTCAATAATTATCCACTACTTAAAGTATGTCAATCATTTACTTTTTTTTATGCGTGACTTTTTTGACAGATCAATTATCCACAACTTTTTTTTACAGAATAACTATTTTTAAAACTTTAAAATTGCATTTAAAAAAAAAAAATTAAGTTGTAAAAGTTAGTGTCGAATTATCCACTAAAGTAAGTCAATCATTTACCTTTTTTTCATTTTTTATGCGTGGCTTTTTGACAGATCAACTATTTTTAAAATTGTATGATCACATTTGCATGTGAACCCATGAAAACATGGGATTAAAACCCTGGTCTAACTCCTTGGTTTTGTTGTCATATCATTGAATTTGATCTCGGAACATTGTATTGAAAATGTTTTTTCTTTTATCATGAAACATGCGCATATATATTTGGTTTACTTTTTTTTGCCTATGGTCTTTAGTTTACAAAATACCAAACCAAAAGATCTATATACTTCAAGGACAGAATAAGAATATAAAAAATTCTTTAAGAGAAAAATTGAAACTTCAAATGTACTTTTAAAGTGAATAGCAATTCCGAAACCATAAAAAAGTTGTAAAGGGTATATTTCAAAAGTTTAAAAAAGTATTGGCGGAATTAAAAAAATCATAGCTAGTTTATGGACAAAAGCCATAATTTGGCCCCTTTTTGGTATTCTAGTGTAATTAGTGGAGGAATCCAAGAAATGGTGAAGTCAAGTGCCCTTTGGTTTACTTATGTTATTTATGCCAATTAGTGCGTGAAGGGTTGAGATAGAGATAAGATGACAACTTTTGAGTTGTATGGTTATCAGATGTACATGTAATCCTGCTTTGTATTGGCAGCCTGGAGCTACTTTTGAATTGAACATAGAGCTTTTAGAAGTGGTGCAGCCTGATAAAGGTGGGGCCTGACCTGATTCGAGAAGCTGATTTTGATCCCCCGCAGGACAAGAAGTTGAGCATTAGCTGACTTAGTCCTTTGGAAGGACGAGGAGAAGCACATCCTATTCTTGGGTAGGGGGAGTTTTTCAATGGAACCTTGAGCGATTATTGTCAATAGAACGAAAATGTTAAGACCAGTTATTTTGTATCGTATCTTACCCCGACTGACTCATTGTGACGGTCCTTTAAAATATAACAAAAAGATCCCGCACCAAATTTCTACTTCGGTCCTTGGCTGTGTCGCCTTTTCT TAAAGTGAAAGATATTATTTATCAAATTCCGCCAAGCGTTTGTGGATAGGGATATAATGTGGGCGCTTTACGAACACTTGCTCTGCGTAGTTCAACCGCCATGGCAGTGGCCATAACTAAGAGGTTGGATTCTTGTCCCATTCATCGCCTTCTTCCTCAAATTCGTTCACAATCTACGGCCAACAGAAGAGAAAATGCTAGCCAAGAATTGTTTTCTCTTCCAATTTCAAGAAGGTCTGTAATTTTGATCTCCTCGCTACCTCTCGCTCTTGTTTCCGTATCTCCGTCGTCCGAGGCAAGAGAGAGAAGGAGCAGGAAGACTATTCCTCTCGAGGACTATCTCACCAGCCCCAATGGACTGAAGTACTATGATATCGAGGAGGGAAAGGGTCCTGTGGCTGAGAAGGGTTCCACAGTACAGGTTCACTTTGATTGCCTCTATAGAGGGATTACAGCTGTGTCAAGTCGAGAATCTAAACTCTTGGCTGGAAATCGTATAATCGCCCAGCCTTATGAGTTCAAAGTAGGAGCCCCTCCCGGGAAGGAGAGGAAACGTGATTTTGTGGACAATCCAAATGGTCTGTTTTCAGCACAGGCTGCACCTAAACCCCCACCAGCAATGTACTCCATAACTGAAGGGATGAAAGTTGGGGGAAAGCGAACGGTGATTGTTCCCCCTGAGGCTGGATATGGTCAAAAGGGAATGAATGAAATCCCACCTGGAGCTACTTTTGAATTGAACATAGAGCTTTTAGAAGTGGTGCAGCCTGATAAAGGTGGGGCCTGACCTGATTCGAGAAGCTGATTTTGATCCCCCGCAGGACAAGAAGTTGAGCATTAGCTGACTTAGTCCTTTGGAAGGACGAGGAGAAGCACATCCTATTCTTGGGTAGGGGGAGTTTTTCAATGGAACCTTGAGCGATTATTGTCAATAGAACGAAAATGTTAAGACCAGTTATTTTGTATCGTATCTTACCCCGACTGACTCATTGTGACGGTCCTTTAAAATATAACAAAAAGATCCCGCACCAAATTTCTACTTCGGTCCTTGGCTGTGTCGCCTTTTCT ATGGCAGTGGCCATAACTAAGAGGTTGGATTCTTGTCCCATTCATCGCCTTCTTCCTCAAATTCGTTCACAATCTACGGCCAACAGAAGAGAAAATGCTAGCCAAGAATTGTTTTCTCTTCCAATTTCAAGAAGGTCTGTAATTTTGATCTCCTCGCTACCTCTCGCTCTTGTTTCCGTATCTCCGTCGTCCGAGGCAAGAGAGAGAAGGAGCAGGAAGACTATTCCTCTCGAGGACTATCTCACCAGCCCCAATGGACTGAAGTACTATGATATCGAGGAGGGAAAGGGTCCTGTGGCTGAGAAGGGTTCCACAGTACAGGTTCACTTTGATTGCCTCTATAGAGGGATTACAGCTGTGTCAAGTCGAGAATCTAAACTCTTGGCTGGAAATCGTATAATCGCCCAGCCTTATGAGTTCAAAGTAGGAGCCCCTCCCGGGAAGGAGAGGAAACGTGATTTTGTGGACAATCCAAATGGTCTGTTTTCAGCACAGGCTGCACCTAAACCCCCACCAGCAATGTACTCCATAACTGAAGGGATGAAAGTTGGGGGAAAGCGAACGGTGATTGTTCCCCCTGAGGCTGGATATGGTCAAAAGGGAATGAATGAAATCCCACCTGGAGCTACTTTTGAATTGAACATAGAGCTTTTAGAAGTGGTGCAGCCTGATAAAGGTGGGGCCTGA MAVAITKRLDSCPIHRLLPQIRSQSTANRRENASQELFSLPISRRSVILISSLPLALVSVSPSSEARERRSRKTIPLEDYLTSPNGLKYYDIEEGKGPVAEKGSTVQVHFDCLYRGITAVSSRESKLLAGNRIIAQPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVGGKRTVIVPPEAGYGQKGMNEIPPGATFELNIELLEVVQPDKGGA Homology
BLAST of Cp4.1LG02g08550 vs. ExPASy Swiss-Prot
Match: Q9LM71 (Peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP18 PE=1 SV=2) HSP 1 Score: 314.7 bits (805), Expect = 8.6e-85 Identity = 163/214 (76.17%), Postives = 179/214 (83.64%), Query Frame = 0
BLAST of Cp4.1LG02g08550 vs. ExPASy Swiss-Prot
Match: Q9SR70 (Peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP16-4 PE=1 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 5.0e-24 Identity = 70/172 (40.70%), Postives = 89/172 (51.74%), Query Frame = 0
BLAST of Cp4.1LG02g08550 vs. ExPASy Swiss-Prot
Match: Q9LDY5 (Peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP17-2 PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.1e-06 Identity = 39/162 (24.07%), Postives = 65/162 (40.12%), Query Frame = 0
BLAST of Cp4.1LG02g08550 vs. ExPASy Swiss-Prot
Match: Q4WHX4 (FK506-binding protein 2 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=fpr2 PE=3 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.1e-06 Identity = 40/119 (33.61%), Postives = 51/119 (42.86%), Query Frame = 0
BLAST of Cp4.1LG02g08550 vs. ExPASy Swiss-Prot
Match: Q5ATN7 (FK506-binding protein 2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=fkbB PE=3 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 1.0e-05 Identity = 39/119 (32.77%), Postives = 51/119 (42.86%), Query Frame = 0
BLAST of Cp4.1LG02g08550 vs. NCBI nr
Match: XP_023523221.1 (peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 452 bits (1162), Expect = 4.10e-160 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g08550 vs. NCBI nr
Match: XP_022941513.1 (peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic [Cucurbita moschata]) HSP 1 Score: 449 bits (1156), Expect = 3.37e-159 Identity = 227/228 (99.56%), Postives = 227/228 (99.56%), Query Frame = 0
BLAST of Cp4.1LG02g08550 vs. NCBI nr
Match: KAG6608648.1 (Peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037965.1 Peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 448 bits (1153), Expect = 9.67e-159 Identity = 226/228 (99.12%), Postives = 227/228 (99.56%), Query Frame = 0
BLAST of Cp4.1LG02g08550 vs. NCBI nr
Match: XP_022982129.1 (peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic [Cucurbita maxima]) HSP 1 Score: 446 bits (1146), Expect = 1.13e-157 Identity = 225/228 (98.68%), Postives = 226/228 (99.12%), Query Frame = 0
BLAST of Cp4.1LG02g08550 vs. NCBI nr
Match: XP_038898611.1 (peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic [Benincasa hispida]) HSP 1 Score: 415 bits (1066), Expect = 1.71e-145 Identity = 207/228 (90.79%), Postives = 218/228 (95.61%), Query Frame = 0
BLAST of Cp4.1LG02g08550 vs. ExPASy TrEMBL
Match: A0A6J1FSB4 (Peptidylprolyl isomerase OS=Cucurbita moschata OX=3662 GN=LOC111446792 PE=4 SV=1) HSP 1 Score: 449 bits (1156), Expect = 1.63e-159 Identity = 227/228 (99.56%), Postives = 227/228 (99.56%), Query Frame = 0
BLAST of Cp4.1LG02g08550 vs. ExPASy TrEMBL
Match: A0A6J1J3Q8 (Peptidylprolyl isomerase OS=Cucurbita maxima OX=3661 GN=LOC111481058 PE=4 SV=1) HSP 1 Score: 446 bits (1146), Expect = 5.46e-158 Identity = 225/228 (98.68%), Postives = 226/228 (99.12%), Query Frame = 0
BLAST of Cp4.1LG02g08550 vs. ExPASy TrEMBL
Match: A0A5D3D8R8 (Peptidylprolyl isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00450 PE=4 SV=1) HSP 1 Score: 414 bits (1065), Expect = 1.17e-145 Identity = 206/227 (90.75%), Postives = 218/227 (96.04%), Query Frame = 0
BLAST of Cp4.1LG02g08550 vs. ExPASy TrEMBL
Match: A0A1S3BUM2 (Peptidylprolyl isomerase OS=Cucumis melo OX=3656 GN=LOC103493843 PE=4 SV=1) HSP 1 Score: 414 bits (1065), Expect = 1.17e-145 Identity = 206/227 (90.75%), Postives = 218/227 (96.04%), Query Frame = 0
BLAST of Cp4.1LG02g08550 vs. ExPASy TrEMBL
Match: A0A0A0L0S6 (Peptidylprolyl isomerase OS=Cucumis sativus OX=3659 GN=Csa_4G664330 PE=4 SV=1) HSP 1 Score: 410 bits (1055), Expect = 3.93e-144 Identity = 205/228 (89.91%), Postives = 217/228 (95.18%), Query Frame = 0
BLAST of Cp4.1LG02g08550 vs. TAIR 10
Match: AT1G20810.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 314.7 bits (805), Expect = 6.1e-86 Identity = 163/214 (76.17%), Postives = 179/214 (83.64%), Query Frame = 0
BLAST of Cp4.1LG02g08550 vs. TAIR 10
Match: AT3G10060.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 112.8 bits (281), Expect = 3.5e-25 Identity = 70/172 (40.70%), Postives = 89/172 (51.74%), Query Frame = 0
BLAST of Cp4.1LG02g08550 vs. TAIR 10
Match: AT1G18170.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 54.3 bits (129), Expect = 1.5e-07 Identity = 39/162 (24.07%), Postives = 65/162 (40.12%), Query Frame = 0
BLAST of Cp4.1LG02g08550 vs. TAIR 10
Match: AT5G13410.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 53.5 bits (127), Expect = 2.5e-07 Identity = 39/130 (30.00%), Postives = 55/130 (42.31%), Query Frame = 0
BLAST of Cp4.1LG02g08550 vs. TAIR 10
Match: AT5G05420.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 49.3 bits (116), Expect = 4.8e-06 Identity = 21/41 (51.22%), Postives = 27/41 (65.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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