Cp4.1LG02g07780 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g07780
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	BZIP domain-containing protein
Location	Cp4.1LG02: 522765 .. 523739 (-)
RNA-Seq Expression	Cp4.1LG02g07780
Synteny	Cp4.1LG02g07780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCCGGTTCTCAGTGAAATCCTCCGTTCCGGTTTCACCATAAGCTCATCTCTCCGCCGCCGCACCCACTTAGTTCAGTCCTTCTCCGTTGTATTCCTCCACTGGTTCTACGTCTTCTCATGAACCGTTTCCCCTCACTCCCACTCTAATATATATATATATATATATATATATATTCCCTAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATTATATATCAATTATATAATAGTTATTTATATTATGGGGTGTTGTAGTGGGAATTCTTCAGGTTCGATATCTCAGATTGGGGTTCAGAACCAGAGCTCTGGTTCGGAAGAGGAGCTGAGGCAATTGATGGACCAGAGAAAAAGAAGGAGAATGCAATCGAACCGGGAATCGGCGCGGCGGTCGAGGATGCGGAAACAGCAGCACTTGGACGGGCTGATGGCGCAGGTGGGCCAATTGAGGGAAAATAAAAACCAAATGATTTCCAGAATTAATCTCACAACCCATCTTTTTCTCAACGTTGAAGCTGAAAACTCTGTTTTGAGAGCTCAGATTCTGGAACTTACTCATAGATTAGACTCCCTAAACCGGATCTTATCTCACATCAACAACAACAACAACGACAAAGATGAAGAACAACATATTTTTCTTCAAAACTTCGATGATTACGATTATCATTATGATTTTGATTTTGATTTTGATTTTGATCATAACCCATCATTCCTCAACTCATTTCTAAGCCAGCAACCCCCCATTGTGGCTTCTGCTGATCATCACGTGCTTCACTGCTGA

mRNA sequence

ATGTCTCCGGTTCTCAGTGAAATCCTCCGTTCCGGTTTCACCATAAGCTCATCTCTCCGCCGCCGCACCCACTTAGTTCAGTCCTTCTCCGTTGTATTCCTCCACTGGTTCGATATCTCAGATTGGGGTTCAGAACCAGAGCTCTGGTTCGGAAGAGGAGCTGAGGCAATTGATGGACCAGAGAAAAAGAAGGAGAATGCAATCGAACCGGGAATCGGCGCGGCGGTCGAGGATGCGGAAACAGCAGCACTTGGACGGGCTGATGGCGCAGCTGAAAACTCTGTTTTGAGAGCTCAGATTCTGGAACTTACTCATAGATTAGACTCCCTAAACCGGATCTTATCTCACATCAACAACAACAACAACGACAAAGATGAAGAACAACATATTTTTCTTCAAAACTTCGATGATTACGATTATCATTATGATTTTGATTTTGATTTTGATTTTGATCATAACCCATCATTCCTCAACTCATTTCTAAGCCAGCAACCCCCCATTGTGGCTTCTGCTGATCATCACGTGCTTCACTGCTGA

Coding sequence (CDS)

ATGTCTCCGGTTCTCAGTGAAATCCTCCGTTCCGGTTTCACCATAAGCTCATCTCTCCGCCGCCGCACCCACTTAGTTCAGTCCTTCTCCGTTGTATTCCTCCACTGGTTCGATATCTCAGATTGGGGTTCAGAACCAGAGCTCTGGTTCGGAAGAGGAGCTGAGGCAATTGATGGACCAGAGAAAAAGAAGGAGAATGCAATCGAACCGGGAATCGGCGCGGCGGTCGAGGATGCGGAAACAGCAGCACTTGGACGGGCTGATGGCGCAGCTGAAAACTCTGTTTTGAGAGCTCAGATTCTGGAACTTACTCATAGATTAGACTCCCTAAACCGGATCTTATCTCACATCAACAACAACAACAACGACAAAGATGAAGAACAACATATTTTTCTTCAAAACTTCGATGATTACGATTATCATTATGATTTTGATTTTGATTTTGATTTTGATCATAACCCATCATTCCTCAACTCATTTCTAAGCCAGCAACCCCCCATTGTGGCTTCTGCTGATCATCACGTGCTTCACTGCTGA

Protein sequence

MSPVLSEILRSGFTISSSLRRRTHLVQSFSVVFLHWFDISDWGSEPELWFGRGAEAIDGPEKKKENAIEPGIGAAVEDAETAALGRADGAAENSVLRAQILELTHRLDSLNRILSHINNNNNDKDEEQHIFLQNFDDYDYHYDFDFDFDFDHNPSFLNSFLSQQPPIVASADHHVLHC

Homology

[Close]

BLAST of Cp4.1LG02g07780 vs. NCBI nr
Match: KAG6608557.1 (hypothetical protein SDJN03_01899, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 337 bits (864), Expect = 2.64e-116
Identity = 175/180 (97.22%), Postives = 177/180 (98.33%), Query Frame = 0


Query: 1   MSPVLSEILRSGFTISSSLRRRTHLVQSFSVVFLHWFDISDWGSEPELWFGRGAEAIDGP 60
           MSPVLSEILRSGFTISSSLRRRTHLVQSFSVVFLHWF ISDWGSEPELWFGRGAEAIDGP
Sbjct: 1   MSPVLSEILRSGFTISSSLRRRTHLVQSFSVVFLHWFVISDWGSEPELWFGRGAEAIDGP 60

Query: 61  EKKKENAIEPGIGAAVEDAETAALGRADGAAENSVLRAQILELTHRLDSLNRILSHINNN 120
           EKK+ENAIEPGIGAAVEDAETAALGRADGAAENSVLRAQILELTHRLDSLNRILSHINNN
Sbjct: 61  EKKEENAIEPGIGAAVEDAETAALGRADGAAENSVLRAQILELTHRLDSLNRILSHINNN 120

Query: 121 NNDKDEEQHIFLQNFDDYDYHYD--FDFDFDFDHNPSFLNSFLSQQPPIVASADHHVLHC 178
           N+DKDEEQHIFLQNFDDYDYHYD  FDFDFDFDHNPSFLNSFLSQQPPIVASADHHVLHC
Sbjct: 121 NDDKDEEQHIFLQNFDDYDYHYDYDFDFDFDFDHNPSFLNSFLSQQPPIVASADHHVLHC 180

[Close]

BLAST of Cp4.1LG02g07780 vs. NCBI nr
Match: XP_023523640.1 (bZIP transcription factor 11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 176 bits (446), Expect = 1.03e-52
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 91  AENSVLRAQILELTHRLDSLNRILSHINNNNNDKDEEQHIFLQNFDDYDYHYDFDFDFDF 150
           AENSVLRAQILELTHRLDSLNRILSHINNNNNDKDEEQHIFLQNFDDYDYHYDFDFDFDF
Sbjct: 91  AENSVLRAQILELTHRLDSLNRILSHINNNNNDKDEEQHIFLQNFDDYDYHYDFDFDFDF 150

Query: 151 DHNPSFLNSFLSQQPPIVASADHHVLHC 178
           DHNPSFLNSFLSQQPPIVASADHHVLHC
Sbjct: 151 DHNPSFLNSFLSQQPPIVASADHHVLHC 178

[Close]

BLAST of Cp4.1LG02g07780 vs. NCBI nr
Match: XP_022940554.1 (bZIP transcription factor 11-like [Cucurbita moschata])

HSP 1 Score: 167 bits (422), Expect = 4.79e-49
Identity = 86/90 (95.56%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 91  AENSVLRAQILELTHRLDSLNRILSHINNNNNDKDEEQHIFLQNFDDYDYHYDFDFDFDF 150
           AENSVLRAQILELTHRLDSLNRILSHINNNN+DKDEE HIFLQNFDDYDYHYDFDFDFDF
Sbjct: 91  AENSVLRAQILELTHRLDSLNRILSHINNNNDDKDEEPHIFLQNFDDYDYHYDFDFDFDF 150

Query: 151 D--HNPSFLNSFLSQQPPIVASADHHVLHC 178
           D  HNPSFLNSFLSQQPPIVASADHHVLHC
Sbjct: 151 DFDHNPSFLNSFLSQQPPIVASADHHVLHC 180

[Close]

BLAST of Cp4.1LG02g07780 vs. NCBI nr
Match: XP_022981832.1 (bZIP transcription factor 11-like [Cucurbita maxima])

HSP 1 Score: 154 bits (388), Expect = 6.75e-44
Identity = 83/92 (90.22%), Postives = 85/92 (92.39%), Query Frame = 0


Query: 91  AENSVLRAQILELTHRLDSLNRILSHINNNNND----KDEEQHIFLQNFDDYDYHYDFDF 150
           AENSVLRAQILELTHRLDSLNRILSHINNN+ND    KDEEQHIFLQNFDDYDY+YDFDF
Sbjct: 91  AENSVLRAQILELTHRLDSLNRILSHINNNDNDNDNDKDEEQHIFLQNFDDYDYNYDFDF 150

Query: 151 DFDFDHNPSFLNSFLSQQPPIVASADHHVLHC 178
           DFD   NPSFLNSFLSQQPPIVASADHHVLHC
Sbjct: 151 DFD--RNPSFLNSFLSQQPPIVASADHHVLHC 180

[Close]

BLAST of Cp4.1LG02g07780 vs. NCBI nr
Match: KAG7024178.1 (bZIP transcription factor 44, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 128 bits (321), Expect = 1.55e-33
Identity = 98/212 (46.23%), Postives = 123/212 (58.02%), Query Frame = 0


Query: 1   MSPVLSEILRSGFTISSSLRRRTHLVQSFSVVFLHWFDIS-----------DWGSEPELW 60
           MSPVLSEILRSGF I+SSLRRRTHLVQSFSVVFLH  + S             GSE EL 
Sbjct: 1   MSPVLSEILRSGFIITSSLRRRTHLVQSFSVVFLHCGNSSGSLSQIAVQNQSSGSEEELR 60

Query: 61  ----------FGRGAEAIDGPEKKKENAIEPGIGAAVE---DAETAALGRADGA------ 120
                          E+      +K+  ++ G+ A +    + +   + R + A      
Sbjct: 61  QLLDQRKRKRMQSNRESARRSRMRKQQHLD-GLMAQLSQLRENKNQIISRINLATQLFLN 120

Query: 121 --AENSVLRAQILELTHRLDSLNRILSHINNNNND---KDEEQHIFLQNFDDYDYHYDFD 177
             A+NSVLRAQI+ELTH L+SLN+ILSHI++NNN    ++E+QH FLQ+F          
Sbjct: 121 VEAQNSVLRAQIVELTHSLESLNQILSHIDDNNNHHHHQEEQQHNFLQSF---------- 180

[Close]

BLAST of Cp4.1LG02g07780 vs. ExPASy TrEMBL
Match: A0A6J1FKK3 (bZIP transcription factor 11-like OS=Cucurbita moschata OX=3662 GN=LOC111446120 PE=4 SV=1)

HSP 1 Score: 167 bits (422), Expect = 2.32e-49
Identity = 86/90 (95.56%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 91  AENSVLRAQILELTHRLDSLNRILSHINNNNNDKDEEQHIFLQNFDDYDYHYDFDFDFDF 150
           AENSVLRAQILELTHRLDSLNRILSHINNNN+DKDEE HIFLQNFDDYDYHYDFDFDFDF
Sbjct: 91  AENSVLRAQILELTHRLDSLNRILSHINNNNDDKDEEPHIFLQNFDDYDYHYDFDFDFDF 150

Query: 151 D--HNPSFLNSFLSQQPPIVASADHHVLHC 178
           D  HNPSFLNSFLSQQPPIVASADHHVLHC
Sbjct: 151 DFDHNPSFLNSFLSQQPPIVASADHHVLHC 180

[Close]

BLAST of Cp4.1LG02g07780 vs. ExPASy TrEMBL
Match: A0A6J1IV33 (bZIP transcription factor 11-like OS=Cucurbita maxima OX=3661 GN=LOC111480858 PE=4 SV=1)

HSP 1 Score: 154 bits (388), Expect = 3.27e-44
Identity = 83/92 (90.22%), Postives = 85/92 (92.39%), Query Frame = 0


Query: 91  AENSVLRAQILELTHRLDSLNRILSHINNNNND----KDEEQHIFLQNFDDYDYHYDFDF 150
           AENSVLRAQILELTHRLDSLNRILSHINNN+ND    KDEEQHIFLQNFDDYDY+YDFDF
Sbjct: 91  AENSVLRAQILELTHRLDSLNRILSHINNNDNDNDNDKDEEQHIFLQNFDDYDYNYDFDF 150

Query: 151 DFDFDHNPSFLNSFLSQQPPIVASADHHVLHC 178
           DFD   NPSFLNSFLSQQPPIVASADHHVLHC
Sbjct: 151 DFD--RNPSFLNSFLSQQPPIVASADHHVLHC 180

[Close]

BLAST of Cp4.1LG02g07780 vs. ExPASy TrEMBL
Match: A0A6J1IFC8 (bZIP transcription factor 11-like OS=Cucurbita maxima OX=3661 GN=LOC111476440 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.89e-20
Identity = 53/88 (60.23%), Postives = 63/88 (71.59%), Query Frame = 0


Query: 91  AENSVLRAQILELTHRLDSLNRILSHI-NNNNNDKDEEQHIFLQNFDDYDYHYDFDFDFD 150
           A+NSVLRAQ++ELTH L+SLN+ILSHI ++NN+   EEQH FLQNF            +D
Sbjct: 91  AQNSVLRAQVVELTHSLESLNQILSHIVDDNNHHHQEEQHNFLQNF------------YD 150

Query: 151 FDHNPSFLNSFLSQQPPIVASADHHVLH 177
           FD  P F+NSF   Q PIVASADHHVLH
Sbjct: 151 FDQTPLFINSFFLTQQPIVASADHHVLH 166

[Close]

BLAST of Cp4.1LG02g07780 vs. ExPASy TrEMBL
Match: A0A4D9AY53 (Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_001915 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 7.06e-20
Identity = 62/116 (53.45%), Postives = 71/116 (61.21%), Query Frame = 0


Query: 1   MSPVLSEILRSGFTISSSLRRRTHLVQSFSVVFLHWFDISDWGSEPELWFGRGAEAIDGP 60
           MSPVLSE+LRSGF ISSSLRRR+HLVQSFSVVFL+WF  +                    
Sbjct: 1   MSPVLSEVLRSGFMISSSLRRRSHLVQSFSVVFLYWFYAA-------------------- 60

Query: 61  EKKKENA-IEPGIGAAVEDAETAALGRADGAAENSVLRAQILELTHRLDSLNRILS 115
           + +KENA I   IGA  E   +         AENSVL AQ++ELTHRL SLN ILS
Sbjct: 61  QLRKENAMIRSSIGATAERCVSVE-------AENSVLAAQMMELTHRLGSLNEILS 89

[Close]

BLAST of Cp4.1LG02g07780 vs. ExPASy TrEMBL
Match: A0A6J1F860 (bZIP transcription factor 11-like OS=Cucurbita moschata OX=3662 GN=LOC111443202 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 7.60e-20
Identity = 53/90 (58.89%), Postives = 64/90 (71.11%), Query Frame = 0


Query: 91  AENSVLRAQILELTHRLDSLNRILSHINNNNND---KDEEQHIFLQNFDDYDYHYDFDFD 150
           A+NSVLRAQI+ELTH L+SLN+ILSHI++NNN    ++E+QH FLQ+F            
Sbjct: 91  AQNSVLRAQIVELTHSLESLNQILSHIDDNNNHHHHQEEQQHNFLQSF------------ 150

Query: 151 FDFDHNPSFLNSFLSQQPPIVASADHHVLH 177
           +DFD  P F NSF   Q PIVASADHHVLH
Sbjct: 151 YDFDQTPLFTNSFFLTQQPIVASADHHVLH 168

[Close]

BLAST of Cp4.1LG02g07780 vs. TAIR 10
Match: AT1G75388.1 (conserved peptide upstream open reading frame 5 )

HSP 1 Score: 68.6 bits (166), Expect = 6.0e-12
Identity = 33/37 (89.19%), Postives = 35/37 (94.59%), Query Frame = 0


Query: 1  MSPVLSEILRSGFTISSSLRRRTHLVQSFSVVFLHWF 38
          MSPV+SEILRSG TI SSLRRRTHLVQSFSVVFL+WF
Sbjct: 1  MSPVISEILRSGLTIDSSLRRRTHLVQSFSVVFLYWF 37

[Close]

BLAST of Cp4.1LG02g07780 vs. TAIR 10
Match: AT2G18162.1 (conserved peptide upstream open reading frame 1 )

HSP 1 Score: 58.9 bits (141), Expect = 4.7e-09
Identity = 28/37 (75.68%), Postives = 32/37 (86.49%), Query Frame = 0


Query: 1  MSPVLSEILRSGFTISSSLRRRTHLVQSFSVVFLHWF 38
          M+PVL EIL SG T+ S+L RRTHLVQSFSVVFL+WF
Sbjct: 1  MTPVLCEILLSGLTVKSALCRRTHLVQSFSVVFLYWF 37

[Close]

BLAST of Cp4.1LG02g07780 vs. TAIR 10
Match: AT4G34588.1 (conserved peptide upstream open reading frame 2 )

HSP 1 Score: 55.5 bits (132), Expect = 5.2e-08
Identity = 27/37 (72.97%), Postives = 33/37 (89.19%), Query Frame = 0


Query: 1  MSP-VLSEILRSGFTISSSLRRRTHLVQSFSVVFLHW 37
          MSP +LSEI  SGF ++S++RRRTHLVQSFSVVFL+W
Sbjct: 1  MSPIILSEIFLSGFMLNSTIRRRTHLVQSFSVVFLYW 37

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g07780 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG02g07780 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6608557.1	2.64e-116	97.22	hypothetical protein SDJN03_01899, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023523640.1	1.03e-52	100.00	bZIP transcription factor 11-like [Cucurbita pepo subsp. pepo]	[more]
XP_022940554.1	4.79e-49	95.56	bZIP transcription factor 11-like [Cucurbita moschata]	[more]
XP_022981832.1	6.75e-44	90.22	bZIP transcription factor 11-like [Cucurbita maxima]	[more]
KAG7024178.1	1.55e-33	46.23	bZIP transcription factor 44, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]

BLAST of Cp4.1LG02g07780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FKK3	2.32e-49	95.56	bZIP transcription factor 11-like OS=Cucurbita moschata OX=3662 GN=LOC111446120 ...	[more]
A0A6J1IV33	3.27e-44	90.22	bZIP transcription factor 11-like OS=Cucurbita maxima OX=3661 GN=LOC111480858 PE...	[more]
A0A6J1IFC8	1.89e-20	60.23	bZIP transcription factor 11-like OS=Cucurbita maxima OX=3661 GN=LOC111476440 PE...	[more]
A0A4D9AY53	7.06e-20	53.45	Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_001915 PE=4 SV=1	[more]
A0A6J1F860	7.60e-20	58.89	bZIP transcription factor 11-like OS=Cucurbita moschata OX=3662 GN=LOC111443202 ...	[more]

BLAST of Cp4.1LG02g07780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75388.1	6.0e-12	89.19	conserved peptide upstream open reading frame 5	[more]
AT2G18162.1	4.7e-09	75.68	conserved peptide upstream open reading frame 1	[more]
AT4G34588.1	5.2e-08	72.97	conserved peptide upstream open reading frame 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 107..127
None	No IPR available	PANTHER	PTHR48137:SF3	SUBFAMILY NOT NAMED	coord: 1..38
None	No IPR available	PANTHER	PTHR48137	FAMILY NOT NAMED	coord: 1..38

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g07780.1	Cp4.1LG02g07780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding