Cp4.1LG02g04510 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g04510
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	flowering-promoting factor 1-like protein 1
Location	Cp4.1LG02: 2311628 .. 2311996 (-)
RNA-Seq Expression	Cp4.1LG02g04510
Synteny	Cp4.1LG02g04510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGGCGTTTGGGTTTTCCGATCAAACGGCGTGATACGCCTCGTCGAAAACTCCCAAGCCGGCGCCGGCACCGGCACCGGCACCGGCGCGGACTACTCCTCCTCCGGCAGCGGCGGCGGAAGAAAGAAGGTTCTGGTTCATCTTCCGTCGGGGCAGCCGGTTTGTTCTTACGGATTCCTTGAGAAGATTCTGGAAGGTTTAGGATGGGAGAGATATTACGAAGGCGATCCAGATTTGTTCCAGTTTCATAAGCTTTCTTCCATTGATCTAATTTCTCTTCCAATGGAGTTCTCCAAATTCAACTCCGTTTACATGTACGATCTCGTCGTCAAAAACCCTAACGTCTTCCACGTTCGAGAACCCTAA

mRNA sequence

ATGTCAGGCGTTTGGGTTTTCCGATCAAACGGCGTGATACGCCTCGTCGAAAACTCCCAAGCCGGCGCCGGCACCGGCACCGGCACCGGCGCGGACTACTCCTCCTCCGGCAGCGGCGGCGGAAGAAAGAAGGTTCTGGTTCATCTTCCGTCGGGGCAGCCGGTTTGTTCTTACGGATTCCTTGAGAAGATTCTGGAAGGTTTAGGATGGGAGAGATATTACGAAGGCGATCCAGATTTGTTCCAGTTTCATAAGCTTTCTTCCATTGATCTAATTTCTCTTCCAATGGAGTTCTCCAAATTCAACTCCGTTTACATGTACGATCTCGTCGTCAAAAACCCTAACGTCTTCCACGTTCGAGAACCCTAA

Coding sequence (CDS)

ATGTCAGGCGTTTGGGTTTTCCGATCAAACGGCGTGATACGCCTCGTCGAAAACTCCCAAGCCGGCGCCGGCACCGGCACCGGCACCGGCGCGGACTACTCCTCCTCCGGCAGCGGCGGCGGAAGAAAGAAGGTTCTGGTTCATCTTCCGTCGGGGCAGCCGGTTTGTTCTTACGGATTCCTTGAGAAGATTCTGGAAGGTTTAGGATGGGAGAGATATTACGAAGGCGATCCAGATTTGTTCCAGTTTCATAAGCTTTCTTCCATTGATCTAATTTCTCTTCCAATGGAGTTCTCCAAATTCAACTCCGTTTACATGTACGATCTCGTCGTCAAAAACCCTAACGTCTTCCACGTTCGAGAACCCTAA

Protein sequence

MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYGFLEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVREP

Homology

[Close]

BLAST of Cp4.1LG02g04510 vs. ExPASy Swiss-Prot
Match: Q5Q0B3 (Flowering-promoting factor 1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FLP1 PE=2 SV=2)

HSP 1 Score: 150.6 bits (379), Expect = 1.2e-35
Identity = 80/128 (62.50%), Postives = 91/128 (71.09%), Query Frame = 0


Query: 1   MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSGSGGG-----RKKVLVHLPSGQPV 60
           MSGVWVF  NGV+RLVEN           G    SS SGG      R+K+LVHLPS + V
Sbjct: 1   MSGVWVFNKNGVMRLVENPY-----NQSAGDSSESSSSGGNQQQRMRRKILVHLPSSEVV 60

Query: 61  CSYGFLEKILEGLGWERYYEGD--PDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKN 120
            SYG LEKIL+ LGWERYY GD    L QFHK +SIDLISLP +FSKFNS++MYD+VVKN
Sbjct: 61  SSYGSLEKILKNLGWERYYSGDNTDHLLQFHKRTSIDLISLPRDFSKFNSIHMYDIVVKN 120

Query: 121 PNVFHVRE 122
           PNVFHVR+
Sbjct: 121 PNVFHVRD 123

[Close]

BLAST of Cp4.1LG02g04510 vs. ExPASy Swiss-Prot
Match: Q9LXB5 (Flowering-promoting factor 1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLP2 PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 7.5e-35
Identity = 76/121 (62.81%), Postives = 87/121 (71.90%), Query Frame = 0


Query: 1   MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYGF 60
           MSGVWVF +NGVIRLVEN     G  T             GR+ VLV+LP+G+ V SY  
Sbjct: 1   MSGVWVF-NNGVIRLVENPNQSGGVST----------QSHGRRNVLVYLPTGEAVSSYSS 60

Query: 61  LEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVR 120
           LE+IL  LGWERY+ GD DL Q+HK SSIDLISLP +FSKFNSVYMYD+VVKNPN FHVR
Sbjct: 61  LEQILRSLGWERYFSGDSDLIQYHKRSSIDLISLPRDFSKFNSVYMYDIVVKNPNSFHVR 110

Query: 121 E 122
           +
Sbjct: 121 D 110

[Close]

BLAST of Cp4.1LG02g04510 vs. ExPASy Swiss-Prot
Match: O23624 (Flowering-promoting factor 1 OS=Arabidopsis thaliana OX=3702 GN=FPF1 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 7.0e-33
Identity = 76/123 (61.79%), Postives = 92/123 (74.80%), Query Frame = 0


Query: 1   MSGVWVFRSNGVIRLVEN-SQAGAGTGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYG 60
           MSGVWVF+ NGVIRLVEN +Q+G+ T                R+KV+V+LP+G+ V SY 
Sbjct: 1   MSGVWVFK-NGVIRLVENPNQSGSDT--------------QNRRKVMVYLPTGEVVSSYS 60

Query: 61  FLEKILEGLGWERYY-EGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFH 120
            LE+IL+ LGWERY+  GD DL QFHK SSIDLISLP +F+KFNSVYMYD+VVKNPN FH
Sbjct: 61  TLEQILQSLGWERYFGGGDTDLLQFHKRSSIDLISLPRDFTKFNSVYMYDIVVKNPNYFH 108

Query: 121 VRE 122
           VR+
Sbjct: 121 VRD 108

[Close]

BLAST of Cp4.1LG02g04510 vs. ExPASy Swiss-Prot
Match: O24340 (Flowering-promoting factor 1 OS=Sinapis alba OX=3728 GN=FPF1 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.7e-32
Identity = 73/122 (59.84%), Postives = 87/122 (71.31%), Query Frame = 0


Query: 1   MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYGF 60
           MSGVWVF+ NGVIRLVEN                S G    R+KV+V+LP+G+ + SY  
Sbjct: 1   MSGVWVFK-NGVIRLVENPN-------------QSGGDTNSRRKVMVYLPTGEVISSYST 60

Query: 61  LEKILEGLGWERYY-EGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHV 120
           LE+IL  LGWERY+  GD DL QFHK SSIDLISLP +F+KF+SVYMYD+VVKNPN FHV
Sbjct: 61  LEQILRSLGWERYFGGGDTDLLQFHKRSSIDLISLPKDFTKFSSVYMYDIVVKNPNYFHV 108

Query: 121 RE 122
           R+
Sbjct: 121 RD 108

[Close]

BLAST of Cp4.1LG02g04510 vs. ExPASy Swiss-Prot
Match: Q9LGE3 (Flowering-promoting factor 1-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RAA1 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.9e-30
Identity = 73/119 (61.34%), Postives = 82/119 (68.91%), Query Frame = 0


Query: 1   MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYGF 60
           MSGVWVF+ NGV+RLVE  QA AGT              GGR+K LVH PSGQ V SY  
Sbjct: 1   MSGVWVFK-NGVVRLVEKQQATAGTAV-----------AGGRRKALVHTPSGQVVSSYAA 60

Query: 61  LEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHV 120
           LE  L  LGWERYYE DP LFQFHK  S+DLISLP +FS F+SV+MYD+VVKN + F V
Sbjct: 61  LEARLTALGWERYYE-DPSLFQFHKRGSLDLISLPADFSAFSSVHMYDIVVKNRDSFRV 106

[Close]

BLAST of Cp4.1LG02g04510 vs. NCBI nr
Match: XP_023524426.1 (flowering-promoting factor 1-like protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 247 bits (630), Expect = 1.78e-82
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYGF 60
           MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYGF
Sbjct: 1   MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYGF 60

Query: 61  LEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVR 120
           LEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVR
Sbjct: 61  LEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVR 120

Query: 121 EP 122
           EP
Sbjct: 121 EP 122

[Close]

BLAST of Cp4.1LG02g04510 vs. NCBI nr
Match: XP_022940479.1 (flowering-promoting factor 1-like protein 2 [Cucurbita moschata] >KAG7037549.1 Flowering-promoting factor 1-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 226 bits (577), Expect = 1.89e-74
Identity = 115/122 (94.26%), Postives = 116/122 (95.08%), Query Frame = 0


Query: 1   MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYGF 60
           MSGVWVFRSNGV+RLVENSQAG GTGT  GADYSS G  GGRKKVLVHLPSGQPVCSYGF
Sbjct: 1   MSGVWVFRSNGVMRLVENSQAGGGTGT--GADYSSGG--GGRKKVLVHLPSGQPVCSYGF 60

Query: 61  LEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVR 120
           LEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVR
Sbjct: 61  LEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVR 118

Query: 121 EP 122
           EP
Sbjct: 121 EP 118

[Close]

BLAST of Cp4.1LG02g04510 vs. NCBI nr
Match: XP_022982497.1 (flowering-promoting factor 1-like protein 2 [Cucurbita maxima])

HSP 1 Score: 226 bits (577), Expect = 2.31e-74
Identity = 116/126 (92.06%), Postives = 118/126 (93.65%), Query Frame = 0


Query: 1   MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSGSGGG----RKKVLVHLPSGQPVC 60
           MSGVWVFRSNGV+RLVE+SQAGAGTGT  GADYSSSG GGG    RKKVLVHLPSGQPVC
Sbjct: 1   MSGVWVFRSNGVMRLVEHSQAGAGTGT--GADYSSSGGGGGGGGGRKKVLVHLPSGQPVC 60

Query: 61  SYGFLEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNV 120
           SYGFLEKILEGLGWERYYEGDPD FQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNV
Sbjct: 61  SYGFLEKILEGLGWERYYEGDPDFFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNV 120

Query: 121 FHVREP 122
           FHVREP
Sbjct: 121 FHVREP 124

[Close]

BLAST of Cp4.1LG02g04510 vs. NCBI nr
Match: KAG6608191.1 (Flowering-promoting factor 1-like protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 224 bits (571), Expect = 1.56e-73
Identity = 114/122 (93.44%), Postives = 115/122 (94.26%), Query Frame = 0


Query: 1   MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYGF 60
           MSGVWVFRSNGV+RLVENSQAG  TGT  GADYSS G  GGRKKVLVHLPSGQPVCSYGF
Sbjct: 1   MSGVWVFRSNGVMRLVENSQAGGSTGT--GADYSSGG--GGRKKVLVHLPSGQPVCSYGF 60

Query: 61  LEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVR 120
           LEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVR
Sbjct: 61  LEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVR 118

Query: 121 EP 122
           EP
Sbjct: 121 EP 118

[Close]

BLAST of Cp4.1LG02g04510 vs. NCBI nr
Match: XP_004136318.1 (flowering-promoting factor 1-like protein 2 [Cucumis sativus] >KGN60157.1 hypothetical protein Csa_002053 [Cucumis sativus])

HSP 1 Score: 205 bits (521), Expect = 7.73e-66
Identity = 101/123 (82.11%), Postives = 109/123 (88.62%), Query Frame = 0


Query: 1   MSGVWVFRSNGVIRLVENSQAGAG-TGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYG 60
           MSGVWVFRSNGV+RLVENSQAG   +  G G  +   G GGGRKKVLVHLPSGQPVCSYG
Sbjct: 1   MSGVWVFRSNGVMRLVENSQAGDDYSSDGHGHQHHHHGGGGGRKKVLVHLPSGQPVCSYG 60

Query: 61  FLEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHV 120
           FL+KILEGLGWERYYEGDPD FQFHK SSIDLISLPM+FSKFNS+YM+DLV+KNPNVFHV
Sbjct: 61  FLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMFDLVIKNPNVFHV 120

Query: 121 REP 122
           REP
Sbjct: 121 REP 123

[Close]

BLAST of Cp4.1LG02g04510 vs. ExPASy TrEMBL
Match: A0A6J1FKC3 (flowering-promoting factor 1-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111446065 PE=3 SV=1)

HSP 1 Score: 226 bits (577), Expect = 9.17e-75
Identity = 115/122 (94.26%), Postives = 116/122 (95.08%), Query Frame = 0


Query: 1   MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYGF 60
           MSGVWVFRSNGV+RLVENSQAG GTGT  GADYSS G  GGRKKVLVHLPSGQPVCSYGF
Sbjct: 1   MSGVWVFRSNGVMRLVENSQAGGGTGT--GADYSSGG--GGRKKVLVHLPSGQPVCSYGF 60

Query: 61  LEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVR 120
           LEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVR
Sbjct: 61  LEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVR 118

Query: 121 EP 122
           EP
Sbjct: 121 EP 118

[Close]

BLAST of Cp4.1LG02g04510 vs. ExPASy TrEMBL
Match: A0A6J1IWR8 (flowering-promoting factor 1-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111481300 PE=3 SV=1)

HSP 1 Score: 226 bits (577), Expect = 1.12e-74
Identity = 116/126 (92.06%), Postives = 118/126 (93.65%), Query Frame = 0


Query: 1   MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSGSGGG----RKKVLVHLPSGQPVC 60
           MSGVWVFRSNGV+RLVE+SQAGAGTGT  GADYSSSG GGG    RKKVLVHLPSGQPVC
Sbjct: 1   MSGVWVFRSNGVMRLVEHSQAGAGTGT--GADYSSSGGGGGGGGGRKKVLVHLPSGQPVC 60

Query: 61  SYGFLEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNV 120
           SYGFLEKILEGLGWERYYEGDPD FQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNV
Sbjct: 61  SYGFLEKILEGLGWERYYEGDPDFFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNV 120

Query: 121 FHVREP 122
           FHVREP
Sbjct: 121 FHVREP 124

[Close]

BLAST of Cp4.1LG02g04510 vs. ExPASy TrEMBL
Match: A0A0A0LHE6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881700 PE=3 SV=1)

HSP 1 Score: 205 bits (521), Expect = 3.74e-66
Identity = 101/123 (82.11%), Postives = 109/123 (88.62%), Query Frame = 0


Query: 1   MSGVWVFRSNGVIRLVENSQAGAG-TGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYG 60
           MSGVWVFRSNGV+RLVENSQAG   +  G G  +   G GGGRKKVLVHLPSGQPVCSYG
Sbjct: 1   MSGVWVFRSNGVMRLVENSQAGDDYSSDGHGHQHHHHGGGGGRKKVLVHLPSGQPVCSYG 60

Query: 61  FLEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHV 120
           FL+KILEGLGWERYYEGDPD FQFHK SSIDLISLPM+FSKFNS+YM+DLV+KNPNVFHV
Sbjct: 61  FLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMFDLVIKNPNVFHV 120

Query: 121 REP 122
           REP
Sbjct: 121 REP 123

[Close]

BLAST of Cp4.1LG02g04510 vs. ExPASy TrEMBL
Match: A0A5A7UF14 (Flowering-promoting factor 1-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold64983G00010 PE=3 SV=1)

HSP 1 Score: 203 bits (516), Expect = 2.63e-65
Identity = 105/137 (76.64%), Postives = 109/137 (79.56%), Query Frame = 0


Query: 1   MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSG---------------SGGGRKKV 60
           MSGVWVFRSNGV+RLVENSQA        G DYSS G                GGGRKKV
Sbjct: 1   MSGVWVFRSNGVMRLVENSQA--------GDDYSSDGHHQHHHHHHHHHGGGGGGGRKKV 60

Query: 61  LVHLPSGQPVCSYGFLEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVY 120
           LVHLPSGQPVCSYGFL+KILEGLGWERYYEGDPD FQFHK SSIDLISLPM+FSKFNS+Y
Sbjct: 61  LVHLPSGQPVCSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIY 120

Query: 121 MYDLVVKNPNVFHVREP 122
           MYDLVVKNPNVFHVREP
Sbjct: 121 MYDLVVKNPNVFHVREP 129

[Close]

BLAST of Cp4.1LG02g04510 vs. ExPASy TrEMBL
Match: A0A1S3CSB1 (flowering-promoting factor 1-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103503767 PE=3 SV=1)

HSP 1 Score: 203 bits (516), Expect = 2.63e-65
Identity = 105/137 (76.64%), Postives = 109/137 (79.56%), Query Frame = 0


Query: 1   MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSG---------------SGGGRKKV 60
           MSGVWVFRSNGV+RLVENSQA        G DYSS G                GGGRKKV
Sbjct: 1   MSGVWVFRSNGVMRLVENSQA--------GDDYSSDGHHQHHHHHHHHHGGGGGGGRKKV 60

Query: 61  LVHLPSGQPVCSYGFLEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVY 120
           LVHLPSGQPVCSYGFL+KILEGLGWERYYEGDPD FQFHK SSIDLISLPM+FSKFNS+Y
Sbjct: 61  LVHLPSGQPVCSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIY 120

Query: 121 MYDLVVKNPNVFHVREP 122
           MYDLVVKNPNVFHVREP
Sbjct: 121 MYDLVVKNPNVFHVREP 129

[Close]

BLAST of Cp4.1LG02g04510 vs. TAIR 10
Match: AT4G31380.1 (FPF1-like protein 1 )

HSP 1 Score: 150.6 bits (379), Expect = 8.2e-37
Identity = 80/128 (62.50%), Postives = 91/128 (71.09%), Query Frame = 0


Query: 1   MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSGSGGG-----RKKVLVHLPSGQPV 60
           MSGVWVF  NGV+RLVEN           G    SS SGG      R+K+LVHLPS + V
Sbjct: 58  MSGVWVFNKNGVMRLVENPY-----NQSAGDSSESSSSGGNQQQRMRRKILVHLPSSEVV 117

Query: 61  CSYGFLEKILEGLGWERYYEGD--PDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKN 120
            SYG LEKIL+ LGWERYY GD    L QFHK +SIDLISLP +FSKFNS++MYD+VVKN
Sbjct: 118 SSYGSLEKILKNLGWERYYSGDNTDHLLQFHKRTSIDLISLPRDFSKFNSIHMYDIVVKN 177

Query: 121 PNVFHVRE 122
           PNVFHVR+
Sbjct: 178 PNVFHVRD 180

[Close]

BLAST of Cp4.1LG02g04510 vs. TAIR 10
Match: AT5G10625.1 (BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 147.9 bits (372), Expect = 5.3e-36
Identity = 76/121 (62.81%), Postives = 87/121 (71.90%), Query Frame = 0


Query: 1   MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYGF 60
           MSGVWVF +NGVIRLVEN     G  T             GR+ VLV+LP+G+ V SY  
Sbjct: 1   MSGVWVF-NNGVIRLVENPNQSGGVST----------QSHGRRNVLVYLPTGEAVSSYSS 60

Query: 61  LEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVR 120
           LE+IL  LGWERY+ GD DL Q+HK SSIDLISLP +FSKFNSVYMYD+VVKNPN FHVR
Sbjct: 61  LEQILRSLGWERYFSGDSDLIQYHKRSSIDLISLPRDFSKFNSVYMYDIVVKNPNSFHVR 110

Query: 121 E 122
           +
Sbjct: 121 D 110

[Close]

BLAST of Cp4.1LG02g04510 vs. TAIR 10
Match: AT5G24860.1 (flowering promoting factor 1 )

HSP 1 Score: 141.4 bits (355), Expect = 5.0e-34
Identity = 76/123 (61.79%), Postives = 92/123 (74.80%), Query Frame = 0


Query: 1   MSGVWVFRSNGVIRLVEN-SQAGAGTGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYG 60
           MSGVWVF+ NGVIRLVEN +Q+G+ T                R+KV+V+LP+G+ V SY 
Sbjct: 1   MSGVWVFK-NGVIRLVENPNQSGSDT--------------QNRRKVMVYLPTGEVVSSYS 60

Query: 61  FLEKILEGLGWERYY-EGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFH 120
            LE+IL+ LGWERY+  GD DL QFHK SSIDLISLP +F+KFNSVYMYD+VVKNPN FH
Sbjct: 61  TLEQILQSLGWERYFGGGDTDLLQFHKRSSIDLISLPRDFTKFNSVYMYDIVVKNPNYFH 108

Query: 121 VRE 122
           VR+
Sbjct: 121 VRD 108

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g04510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5Q0B3	1.2e-35	62.50	Flowering-promoting factor 1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=F...	[more]
Q9LXB5	7.5e-35	62.81	Flowering-promoting factor 1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=F...	[more]
O23624	7.0e-33	61.79	Flowering-promoting factor 1 OS=Arabidopsis thaliana OX=3702 GN=FPF1 PE=1 SV=1	[more]
O24340	2.7e-32	59.84	Flowering-promoting factor 1 OS=Sinapis alba OX=3728 GN=FPF1 PE=2 SV=1	[more]
Q9LGE3	1.9e-30	61.34	Flowering-promoting factor 1-like protein 1 OS=Oryza sativa subsp. japonica OX=3...	[more]

BLAST of Cp4.1LG02g04510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023524426.1	1.78e-82	100.00	flowering-promoting factor 1-like protein 2 [Cucurbita pepo subsp. pepo]	[more]
XP_022940479.1	1.89e-74	94.26	flowering-promoting factor 1-like protein 2 [Cucurbita moschata] >KAG7037549.1 F...	[more]
XP_022982497.1	2.31e-74	92.06	flowering-promoting factor 1-like protein 2 [Cucurbita maxima]	[more]
KAG6608191.1	1.56e-73	93.44	Flowering-promoting factor 1-like protein 2, partial [Cucurbita argyrosperma sub...	[more]
XP_004136318.1	7.73e-66	82.11	flowering-promoting factor 1-like protein 2 [Cucumis sativus] >KGN60157.1 hypoth...	[more]

BLAST of Cp4.1LG02g04510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FKC3	9.17e-75	94.26	flowering-promoting factor 1-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1IWR8	1.12e-74	92.06	flowering-promoting factor 1-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A0A0LHE6	3.74e-66	82.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881700 PE=3 SV=1	[more]
A0A5A7UF14	2.63e-65	76.64	Flowering-promoting factor 1-like protein 2 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CSB1	2.63e-65	76.64	flowering-promoting factor 1-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103503...	[more]

BLAST of Cp4.1LG02g04510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31380.1	8.2e-37	62.50	FPF1-like protein 1	[more]
AT5G10625.1	5.3e-36	62.81	BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:A...	[more]
AT5G24860.1	5.0e-34	61.79	flowering promoting factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33433:SF15	FLOWERING-PROMOTING FACTOR 1-LIKE PROTEIN 2	coord: 1..121
IPR039274	Flowering-promoting factor 1	PANTHER	PTHR33433	FLOWERING-PROMOTING FACTOR 1-LIKE PROTEIN 1	coord: 1..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g04510.1	Cp4.1LG02g04510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem