Cp4.1LG02g03850 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g03850
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	XIAP-associated factor 1-like
Location	Cp4.1LG02: 2784718 .. 2788042 (-)
RNA-Seq Expression	Cp4.1LG02g03850
Synteny	Cp4.1LG02g03850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCTTTTCATTTAGGTAAATAGTGGGTGAGGTGGATCGTCTCCATTCGTGAAAGTCATTCACTCGATGAGAAGTAGTTGAATCGAAGTCGGTTGCTCTTTGTTCTCCAAGCGTTATCGATCCACGGCGACGAATTTCTAGGTAAATTTCGTTCGATTTCAGAATCTTATCATTTTCTGCTCCTTTTCCCCCCCTATTTGATCTCCTCGAATTTCTCTGCAGCGCTTCAGTTATCGTTTACCTAATTTTGACGGACCTTGTACAACGATCGCCTACGTTCTGTTCGTTCGTTCCGATGGCAGTTGCATCCGAAGCGACCACAAGCTTATGCAGTCACTGGTATTGTAATTCTGGATGGATCGATAACTTCTATGTTTACGGCAAAAAATTACTTGAAGATTTTTTTGCGATTTCAATTTCTCTTGATTCTGGTGTTGATTTTTTTGAATTGTGTCAATCGTGATTGTCTTTTGCGATTGTTTTGGATTTCGGTTTCTTTCTATCCATATGGTTAGAGATTCTTATCCAGTTTAGTCACGAATCTGCTGTGGAGAGTGGATCGTTGGTTTGTTAATTTAGAAAAGAAATATTAGGTCAGAAAGTGAATTGCGCTGAAGTTCGATCTTCTTCGTGATGATTTTTGTCACCTGATTCCGTTTCTAGAAGTTGTTCTTCTATAGTGACGATATGAACGATGATTGCTTTGTCTTCTCCATTCAGCGGCCGAGACATTCCGTCGACAAATATCGATCTGCATTCTGTTCATTGCGAGCGGAACCTAGAGAAATGTAAAATATGCGGCGATATGGTTCCTAAAAGACATGCGGAGGAACATTTCCTGAACACCCATGCTTCTGTACGATGACTTATCCTTCAAACTTTGTTGATAACCATTTCTGAAATGCACTTCAAGGCTACTCTATGTTACTCTTCCGCTTTCTCTCTTAATTAGGTTTTTGTTCCAATTTGTTGCATTGTTTATACAGCTTCAATTATAACATTAAGCTTGAGGGTTATGATTCTGTATAGTTTAGGTTGTGGCTCTACGGTCTTTGGATAAGGATTAGTGGTAGTTCTTTGAATTATTGGAATTTCAAGTGTTTATGGCCTTGTATTTCGACAGGTTTCCTGTTCGCTGTGTAGCGAGACCATGGAACGGGACATTTTAGCCATTCATAAAGGTGAAAATTGCCCTCAAAGGATTGTTACTTGCGAGTTTTGTGAGTTCCCATTGCCAGCAATAGATTTGGCCGAGCATCAAGTACGTTGACGGATTGTTACTTGCAAGTTAAACGAGAATTTCAATGGAGGTCTCAATGTAATAACTTACCTTTGTTGGTTCAAATGTATAGGAGGTTTGTGGTAACCGGACCGAGCTTTGTCATCTGTGTCGCCGATATATAAGACTGCGAGAAAGATATAGTCATGAGAATAATTGCGAGAATGTTGCAGCAGCAGATAATATAGCAGAGTCTTCCAGGTATATAGAATCAATTAATGTTTGATCAACTGATTGTTTAACTTGTATCAGTGTTTATTTGTTGCTTCTGCAATTACTTTTATACTAAATTTTTTGCTTGAACCCTTCAGTTTTGGCCTATCTAGGAAAAACGAAACTTGTTCGTTGCTATAGCGGAGTTCGACGGGTTGAATTTTTTTAGAAAACGAACGCATAGATCTTACTATAGACATCTATTAGTTTTGTTTTTCTAAACTAAATCTCTAATGCTTCGGGTAATAACAGTTTTGTTATCTGTTGAAGTTATTGTCTAGATAATGTCTTATTGTTCTATTAACTTCTGTAGGCTACGAAGTTCCAAGTTCTATACTTGAAACTTGCATTGTATTCGGAAACATCCCCTTGAACTTTTGTAAACTTAAAACTGTTAGGAATCACGAACCTCTACAATGGTATGATAATGTCCGCTCTATTAGCTCTCATGACTTTGCTTTTGGTTTTCCCAAAAAGACTCGTACCAATAGAGATAGTCTTCCTTACTTATAAACTCATGATCTTCTTCTTAGTTAGTCAACGTGGGATTACTCATCTCAATAATCCTCACCAAAAGCTTCATCAGTAAATGGAAGTGTCTTATCTCGTGGTAATGCACTCACCAACGCCATGTAATTTGCATATACTCCTCTCTTCCTTCTGCCCTATGGAGTTGGCTTCATCTAAAGGAATAAGTTAGAGCATTATTCCACGGTTAGAAATTTGTTATATGTGAGAAATTTATTGTATGTGAGAAATTTATTGCATTGTTCCATAGTTTGGTCTTTAGTGGTCGATAACAGTCGTGTGAATAATAAAGGATTTAGAGAGAACGAGTTCATAGATGTTATCTAAGTTATCTTGACAATCAAGTGTAGTAAGGTCAATCGGTTGTTTTGTGAGAATAGTCCAGGTTTGCGCAAGCTAGCCTGGACACTCACAGATATATAAAATAAGTATGTGAAATAGACCGGTACGACTTGCTACTTAAACCCGCAATTCTTCATTCACTTTCGTAACTTTTCTCCGTTCTTTTCTTCTTTTTGGAGGGCGGGAATGTGAATCGTTTAAATTCCTCTATTTCATTTATCATGTGACCACTTCAGCGATTTGATGAGCCAGTGTATGTAGACTTTTAGCTCGACATTTTCTCTATGTTTCATTGAATGATGAATTCCATTTACATTTAGGGATCACCATTCGTGTTAGTACGATCGAATGTGAAACACGTGATCTATGTTCATGGTTCTCGTATTCGAAATTCCGAATGTTCAATTTGTTATCTTCTTTCTAACAACATGTGAACTGTGTCTGAAGGGATGTGGGGTCAGCACCACCAGAAAGAGAAGAAGCTAGAGGTCGAGGCGCTCGAAGAAGACAGCCGCAGGAGTTTTCTACCCGACGCCTTATATTCACTATTGCAATAACAGGTATTGCCGTTCTATTAGGATCCTTATTTTTCCAGAAAAAGGGCGAGAACAATGTGGTACACTGATTGCTGGTGAGGTGAGGTAGGTTACCACAGATCCTCCTAGTCCACAGAGTGGAGAATATTCCATGTAAAAAAGGAAAAAGAAACCCTTCCATTTTTCTGTACCAAGAATATTATTAGACAACTACTGTAAACTCATAACATTTGGGCGGAGATTTCGATCCAACGGCTCTACTCCTTTGTTCTTAAGGCTATGTATGATGAGTTTGAATCTCTTCTCAAACTAATATTAAGAAAAATAATTATATTTTAAAAATTAATGCAACATTTATATTTTATTTTTAGAGAAAAATTATTAAATGTTGCTATTTTTGGGTTTAGAATATATTTTTCAGTCTCTG

mRNA sequence

ATTCTTTTCATTTAGGTAAATAGTGGGTGAGGTGGATCGTCTCCATTCGTGAAAGTCATTCACTCGATGAGAAGTAGTTGAATCGAAGTCGGTTGCTCTTTGTTCTCCAAGCGTTATCGATCCACGGCGACGAATTTCTAGCGCTTCAGTTATCGTTTACCTAATTTTGACGGACCTTGTACAACGATCGCCTACGTTCTGTTCGTTCGTTCCGATGGCAGTTGCATCCGAAGCGACCACAAGCTTATGCAGTCACTGCGGCCGAGACATTCCGTCGACAAATATCGATCTGCATTCTGTTCATTGCGAGCGGAACCTAGAGAAATGTAAAATATGCGGCGATATGGTTCCTAAAAGACATGCGGAGGAACATTTCCTGAACACCCATGCTTCTGTTTCCTGTTCGCTGTGTAGCGAGACCATGGAACGGGACATTTTAGCCATTCATAAAGGTGAAAATTGCCCTCAAAGGATTGTTACTTGCGAGTTTTGTGAGTTCCCATTGCCAGCAATAGATTTGGCCGAGCATCAAGAGGTTTGTGGTAACCGGACCGAGCTTTGTCATCTGTGTCGCCGATATATAAGACTGCGAGAAAGATATAGTCATGAGAATAATTGCGAGAATGTTGCAGCAGCAGATAATATAGCAGAGTCTTCCAGGGATGTGGGGTCAGCACCACCAGAAAGAGAAGAAGCTAGAGGTCGAGGCGCTCGAAGAAGACAGCCGCAGGAGTTTTCTACCCGACGCCTTATATTCACTATTGCAATAACAGGTATTGCCGTTCTATTAGGATCCTTATTTTTCCAGAAAAAGGGCGAGAACAATGTGGTACACTGATTGCTGGTGAGGTGAGGTAGGTTACCACAGATCCTCCTAGTCCACAGAGTGGAGAATATTCCATGTAAAAAAGGAAAAAGAAACCCTTCCATTTTTCTGTACCAAGAATATTATTAGACAACTACTGTAAACTCATAACATTTGGGCGGAGATTTCGATCCAACGGCTCTACTCCTTTGTTCTTAAGGCTATGTATGATGAGTTTGAATCTCTTCTCAAACTAATATTAAGAAAAATAATTATATTTTAAAAATTAATGCAACATTTATATTTTATTTTTAGAGAAAAATTATTAAATGTTGCTATTTTTGGGTTTAGAATATATTTTTCAGTCTCTG

Coding sequence (CDS)

ATGGCAGTTGCATCCGAAGCGACCACAAGCTTATGCAGTCACTGCGGCCGAGACATTCCGTCGACAAATATCGATCTGCATTCTGTTCATTGCGAGCGGAACCTAGAGAAATGTAAAATATGCGGCGATATGGTTCCTAAAAGACATGCGGAGGAACATTTCCTGAACACCCATGCTTCTGTTTCCTGTTCGCTGTGTAGCGAGACCATGGAACGGGACATTTTAGCCATTCATAAAGGTGAAAATTGCCCTCAAAGGATTGTTACTTGCGAGTTTTGTGAGTTCCCATTGCCAGCAATAGATTTGGCCGAGCATCAAGAGGTTTGTGGTAACCGGACCGAGCTTTGTCATCTGTGTCGCCGATATATAAGACTGCGAGAAAGATATAGTCATGAGAATAATTGCGAGAATGTTGCAGCAGCAGATAATATAGCAGAGTCTTCCAGGGATGTGGGGTCAGCACCACCAGAAAGAGAAGAAGCTAGAGGTCGAGGCGCTCGAAGAAGACAGCCGCAGGAGTTTTCTACCCGACGCCTTATATTCACTATTGCAATAACAGGTATTGCCGTTCTATTAGGATCCTTATTTTTCCAGAAAAAGGGCGAGAACAATGTGGTACACTGA

Protein sequence

MAVASEATTSLCSHCGRDIPSTNIDLHSVHCERNLEKCKICGDMVPKRHAEEHFLNTHASVSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRRQPQEFSTRRLIFTIAITGIAVLLGSLFFQKKGENNVVH

Homology

[Close]

BLAST of Cp4.1LG02g03850 vs. ExPASy Swiss-Prot
Match: Q4R970 (TRAF-type zinc finger domain-containing protein 1 OS=Macaca fascicularis OX=9541 GN=TRAFD1 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 5.9e-24
Identity = 46/127 (36.22%), Postives = 72/127 (56.69%), Query Frame = 0


Query: 9   TSLCSHCGRDIPSTNIDLHSVHCERNLEKCKICGDMVPKRHAEEHFLNTHASVSCSLCSE 68
           T LC +C ++IP  N  +H +HC+RN+  C IC +  PK   E H    H  V+C  C++
Sbjct: 10  TRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPICKEPFPKSDMETHMAAEHCQVTCK-CNK 69

Query: 69  TMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRER 128
            +E+ +L  H+   CP R+  C+ C+  L  + L EH++ CG RTELC  C R + +++ 
Sbjct: 70  KLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVLVKDL 129

Query: 129 YSHENNC 136
            +H   C
Sbjct: 130 KTHPEVC 135

[Close]

BLAST of Cp4.1LG02g03850 vs. ExPASy Swiss-Prot
Match: Q99MM4 (TRAF-type zinc finger domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Trafd1 PE=1 SV=2)

HSP 1 Score: 111.3 bits (277), Expect = 1.3e-23
Identity = 49/147 (33.33%), Postives = 76/147 (51.70%), Query Frame = 0


Query: 11  LCSHCGRDIPSTNIDLHSVHCERNLEKCKICGDMVPKRHAEEHFLNTHASVSCSLCSETM 70
           LC +C ++IP  N  +H +HC+RN+  C +C +  PK   + H    H  V+C  C++ +
Sbjct: 12  LCDNCKKEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKSDMDIHVATEHCQVTCK-CNKKL 71

Query: 71  ERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYS 130
           E+  L  H    CP R+  C+ C+  L  + L EH++ CG RTELC  C R + ++E  +
Sbjct: 72  EKRQLKQHVETECPLRLAVCQHCDLELSVVKLKEHEDYCGARTELCGSCGRNVLVKELQT 131

Query: 131 HENNCENVAAADNIAESSRDVGSAPPE 158
           H       A    + E  R   + PPE
Sbjct: 132 HP------AVCGRVEEEKRSEAAVPPE 151

[Close]

BLAST of Cp4.1LG02g03850 vs. ExPASy Swiss-Prot
Match: O14545 (TRAF-type zinc finger domain-containing protein 1 OS=Homo sapiens OX=9606 GN=TRAFD1 PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.2e-23
Identity = 45/127 (35.43%), Postives = 71/127 (55.91%), Query Frame = 0


Query: 9   TSLCSHCGRDIPSTNIDLHSVHCERNLEKCKICGDMVPKRHAEEHFLNTHASVSCSLCSE 68
           T LC +C ++IP  N  +H +HC+RN+  C  C +  PK   E H    H  V+C  C++
Sbjct: 10  TRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPTCKEPFPKSDMETHMAAEHCQVTCK-CNK 69

Query: 69  TMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRER 128
            +E+ +L  H+   CP R+  C+ C+  L  + L EH++ CG RTELC  C R + +++ 
Sbjct: 70  KLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVLVKDL 129

Query: 129 YSHENNC 136
            +H   C
Sbjct: 130 KTHPEVC 135

[Close]

BLAST of Cp4.1LG02g03850 vs. ExPASy Swiss-Prot
Match: Q3UDK1 (TRAF-type zinc finger domain-containing protein 1 OS=Mus musculus OX=10090 GN=Trafd1 PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.2e-23
Identity = 49/152 (32.24%), Postives = 78/152 (51.32%), Query Frame = 0


Query: 6   EATTSLCSHCGRDIPSTNIDLHSVHCERNLEKCKICGDMVPKRHAEEHFLNTHASVSCSL 65
           +  + LC +C ++IP  N  +H +HC+RN+  C +C +  PK   + H    H  V+C  
Sbjct: 7   DQASRLCDNCKKEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKSDMDIHMAAEHCQVTCK- 66

Query: 66  CSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRL 125
           C++ +E+  L  H    CP R+  C+ C+  L  + L EH++ CG RTELC  C R + +
Sbjct: 67  CNKKLEKRQLKQHAETECPLRLAVCQHCDLELSVVKLKEHEDYCGARTELCGSCGRNVLV 126

Query: 126 RERYSHENNCENVAAADNIAESSRDVGSAPPE 158
           +E  +H   C        + E  R   + PPE
Sbjct: 127 KELKTHPEVC------GRVEEEKRTEAAIPPE 151

[Close]

BLAST of Cp4.1LG02g03850 vs. ExPASy Swiss-Prot
Match: Q58D05 (TRAF-type zinc finger domain-containing protein 1 OS=Bos taurus OX=9913 GN=TRAFD1 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.0e-23
Identity = 44/131 (33.59%), Postives = 73/131 (55.73%), Query Frame = 0


Query: 5   SEATTSLCSHCGRDIPSTNIDLHSVHCERNLEKCKICGDMVPKRHAEEHFLNTHASVSCS 64
           ++  T LC +C ++IP  N  +H +HC+RN+  C +C +  PK   E H    H  V+C 
Sbjct: 6   NDQDTRLCDNCKKEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKCDMETHMATEHCQVTCK 65

Query: 65  LCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIR 124
            C++ +E+  L  H+   CP R+  C+ C+  L  + L +H++ CG RTELC  C R + 
Sbjct: 66  -CNKKLEKRQLKKHEETECPLRLALCQHCDLELSVLKLKDHEDYCGARTELCGTCGRNVL 125

Query: 125 LRERYSHENNC 136
           +++  +H   C
Sbjct: 126 VKDLKTHPEVC 135

[Close]

BLAST of Cp4.1LG02g03850 vs. NCBI nr
Match: XP_023524658.1 (XIAP-associated factor 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 426 bits (1096), Expect = 9.44e-151
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0


Query: 1   MAVASEATTSLCSHCGRDIPSTNIDLHSVHCERNLEKCKICGDMVPKRHAEEHFLNTHAS 60
           MAVASEATTSLCSHCGRDIPSTNIDLHSVHCERNLEKCKICGDMVPKRHAEEHFLNTHAS
Sbjct: 1   MAVASEATTSLCSHCGRDIPSTNIDLHSVHCERNLEKCKICGDMVPKRHAEEHFLNTHAS 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR 120
           VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR
Sbjct: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR 120

Query: 121 RYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRRQPQEFSTRRLI 180
           RYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRRQPQEFSTRRLI
Sbjct: 121 RYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRRQPQEFSTRRLI 180

Query: 181 FTIAITGIAVLLGSLFFQKKGENNVVH 207
           FTIAITGIAVLLGSLFFQKKGENNVVH
Sbjct: 181 FTIAITGIAVLLGSLFFQKKGENNVVH 207

[Close]

BLAST of Cp4.1LG02g03850 vs. NCBI nr
Match: XP_022940915.1 (XIAP-associated factor 1-like [Cucurbita moschata])

HSP 1 Score: 426 bits (1094), Expect = 1.91e-150
Identity = 205/207 (99.03%), Postives = 207/207 (100.00%), Query Frame = 0


Query: 1   MAVASEATTSLCSHCGRDIPSTNIDLHSVHCERNLEKCKICGDMVPKRHAEEHFLNTHAS 60
           MAVASEATTSLCSHCGRDIPSTNIDLHSVHCERNLEKCKICGDMVPKRHAEEHFLNTHAS
Sbjct: 1   MAVASEATTSLCSHCGRDIPSTNIDLHSVHCERNLEKCKICGDMVPKRHAEEHFLNTHAS 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR 120
           VSCSLCSETMERD+LAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR
Sbjct: 61  VSCSLCSETMERDVLAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR 120

Query: 121 RYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRRQPQEFSTRRLI 180
           RY+RLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRRQPQEFSTRRLI
Sbjct: 121 RYVRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRRQPQEFSTRRLI 180

Query: 181 FTIAITGIAVLLGSLFFQKKGENNVVH 207
           FTIAITGIAVLLGSLFFQKKGENNVVH
Sbjct: 181 FTIAITGIAVLLGSLFFQKKGENNVVH 207

[Close]

BLAST of Cp4.1LG02g03850 vs. NCBI nr
Match: XP_022981055.1 (XIAP-associated factor 1-like [Cucurbita maxima])

HSP 1 Score: 423 bits (1087), Expect = 2.23e-149
Identity = 205/207 (99.03%), Postives = 207/207 (100.00%), Query Frame = 0


Query: 1   MAVASEATTSLCSHCGRDIPSTNIDLHSVHCERNLEKCKICGDMVPKRHAEEHFLNTHAS 60
           MAVASEATTSLCSHCGRDIPSTNIDLHSVHCERNLEKCKICGDMVPKRHAEEHFLNTHAS
Sbjct: 1   MAVASEATTSLCSHCGRDIPSTNIDLHSVHCERNLEKCKICGDMVPKRHAEEHFLNTHAS 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR 120
           VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR
Sbjct: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR 120

Query: 121 RYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRRQPQEFSTRRLI 180
           RYIRLRERYSHENNCENVAAAD+IAESSRDVGSAPPEREEARGRGA+RRQPQEFSTRRLI
Sbjct: 121 RYIRLRERYSHENNCENVAAADHIAESSRDVGSAPPEREEARGRGAQRRQPQEFSTRRLI 180

Query: 181 FTIAITGIAVLLGSLFFQKKGENNVVH 207
           FTIAITGIAVLLGSLFFQKKGENNVVH
Sbjct: 181 FTIAITGIAVLLGSLFFQKKGENNVVH 207

[Close]

BLAST of Cp4.1LG02g03850 vs. NCBI nr
Match: XP_023534901.1 (XIAP-associated factor 1-like [Cucurbita pepo subsp. pepo] >KAG6591703.1 XIAP-associated factor 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024586.1 XIAP-associated factor 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 387 bits (993), Expect = 4.62e-135
Identity = 184/207 (88.89%), Postives = 197/207 (95.17%), Query Frame = 0


Query: 1   MAVASEATTSLCSHCGRDIPSTNIDLHSVHCERNLEKCKICGDMVPKRHAEEHFLNTHAS 60
           MAVASE TTS+C+HCGRDIPSTNIDLHSVHC RNLEKCKICGDMVPKRHAEEH+LNTHA 
Sbjct: 1   MAVASEETTSICNHCGRDIPSTNIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAP 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR 120
           VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPA+DLAEHQEVCGNRTELCHLCR
Sbjct: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCR 120

Query: 121 RYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRRQPQEFSTRRLI 180
           RYIRLRERYSHENNC+ V AAD +AESSRDVG+AP ER++ R RGARRRQPQEFSTRRLI
Sbjct: 121 RYIRLRERYSHENNCKGVTAADTVAESSRDVGAAP-ERDQVRDRGARRRQPQEFSTRRLI 180

Query: 181 FTIAITGIAVLLGSLFFQKKGENNVVH 207
           FTIAITGIAVLLGSLFFQ+K E+N++H
Sbjct: 181 FTIAITGIAVLLGSLFFQRKAESNIMH 206

[Close]

BLAST of Cp4.1LG02g03850 vs. NCBI nr
Match: XP_022975863.1 (XIAP-associated factor 1-like [Cucurbita maxima])

HSP 1 Score: 386 bits (992), Expect = 6.57e-135
Identity = 184/207 (88.89%), Postives = 197/207 (95.17%), Query Frame = 0


Query: 1   MAVASEATTSLCSHCGRDIPSTNIDLHSVHCERNLEKCKICGDMVPKRHAEEHFLNTHAS 60
           MAVASE TTS+C+HCGRDIPS NIDLHSVHC RNLEKCKICGDMVPKRHAEEH+LNTHA 
Sbjct: 1   MAVASEETTSICNHCGRDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAP 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR 120
           VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPA+DLAEHQEVCGNRTELCHLCR
Sbjct: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCR 120

Query: 121 RYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRRQPQEFSTRRLI 180
           RYIRLRERYSHENNC+ VAAAD +AESSRDVG+AP ER++ R RGARRRQPQEFSTRRLI
Sbjct: 121 RYIRLRERYSHENNCKGVAAADTVAESSRDVGAAP-ERDQVRDRGARRRQPQEFSTRRLI 180

Query: 181 FTIAITGIAVLLGSLFFQKKGENNVVH 207
           FTIAITGIAVLLGSLFFQ+K E+N++H
Sbjct: 181 FTIAITGIAVLLGSLFFQRKAESNIMH 206

[Close]

BLAST of Cp4.1LG02g03850 vs. ExPASy TrEMBL
Match: A0A6J1FS21 (XIAP-associated factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111446359 PE=4 SV=1)

HSP 1 Score: 426 bits (1094), Expect = 9.23e-151
Identity = 205/207 (99.03%), Postives = 207/207 (100.00%), Query Frame = 0


Query: 1   MAVASEATTSLCSHCGRDIPSTNIDLHSVHCERNLEKCKICGDMVPKRHAEEHFLNTHAS 60
           MAVASEATTSLCSHCGRDIPSTNIDLHSVHCERNLEKCKICGDMVPKRHAEEHFLNTHAS
Sbjct: 1   MAVASEATTSLCSHCGRDIPSTNIDLHSVHCERNLEKCKICGDMVPKRHAEEHFLNTHAS 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR 120
           VSCSLCSETMERD+LAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR
Sbjct: 61  VSCSLCSETMERDVLAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR 120

Query: 121 RYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRRQPQEFSTRRLI 180
           RY+RLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRRQPQEFSTRRLI
Sbjct: 121 RYVRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRRQPQEFSTRRLI 180

Query: 181 FTIAITGIAVLLGSLFFQKKGENNVVH 207
           FTIAITGIAVLLGSLFFQKKGENNVVH
Sbjct: 181 FTIAITGIAVLLGSLFFQKKGENNVVH 207

[Close]

BLAST of Cp4.1LG02g03850 vs. ExPASy TrEMBL
Match: A0A6J1IYD6 (XIAP-associated factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111480316 PE=4 SV=1)

HSP 1 Score: 423 bits (1087), Expect = 1.08e-149
Identity = 205/207 (99.03%), Postives = 207/207 (100.00%), Query Frame = 0


Query: 1   MAVASEATTSLCSHCGRDIPSTNIDLHSVHCERNLEKCKICGDMVPKRHAEEHFLNTHAS 60
           MAVASEATTSLCSHCGRDIPSTNIDLHSVHCERNLEKCKICGDMVPKRHAEEHFLNTHAS
Sbjct: 1   MAVASEATTSLCSHCGRDIPSTNIDLHSVHCERNLEKCKICGDMVPKRHAEEHFLNTHAS 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR 120
           VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR
Sbjct: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR 120

Query: 121 RYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRRQPQEFSTRRLI 180
           RYIRLRERYSHENNCENVAAAD+IAESSRDVGSAPPEREEARGRGA+RRQPQEFSTRRLI
Sbjct: 121 RYIRLRERYSHENNCENVAAADHIAESSRDVGSAPPEREEARGRGAQRRQPQEFSTRRLI 180

Query: 181 FTIAITGIAVLLGSLFFQKKGENNVVH 207
           FTIAITGIAVLLGSLFFQKKGENNVVH
Sbjct: 181 FTIAITGIAVLLGSLFFQKKGENNVVH 207

[Close]

BLAST of Cp4.1LG02g03850 vs. ExPASy TrEMBL
Match: A0A6J1IKG6 (XIAP-associated factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476436 PE=4 SV=1)

HSP 1 Score: 386 bits (992), Expect = 3.18e-135
Identity = 184/207 (88.89%), Postives = 197/207 (95.17%), Query Frame = 0


Query: 1   MAVASEATTSLCSHCGRDIPSTNIDLHSVHCERNLEKCKICGDMVPKRHAEEHFLNTHAS 60
           MAVASE TTS+C+HCGRDIPS NIDLHSVHC RNLEKCKICGDMVPKRHAEEH+LNTHA 
Sbjct: 1   MAVASEETTSICNHCGRDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAP 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR 120
           VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPA+DLAEHQEVCGNRTELCHLCR
Sbjct: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCR 120

Query: 121 RYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRRQPQEFSTRRLI 180
           RYIRLRERYSHENNC+ VAAAD +AESSRDVG+AP ER++ R RGARRRQPQEFSTRRLI
Sbjct: 121 RYIRLRERYSHENNCKGVAAADTVAESSRDVGAAP-ERDQVRDRGARRRQPQEFSTRRLI 180

Query: 181 FTIAITGIAVLLGSLFFQKKGENNVVH 207
           FTIAITGIAVLLGSLFFQ+K E+N++H
Sbjct: 181 FTIAITGIAVLLGSLFFQRKAESNIMH 206

[Close]

BLAST of Cp4.1LG02g03850 vs. ExPASy TrEMBL
Match: A0A6J1F858 (XIAP-associated factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443198 PE=4 SV=1)

HSP 1 Score: 386 bits (991), Expect = 4.52e-135
Identity = 184/207 (88.89%), Postives = 196/207 (94.69%), Query Frame = 0


Query: 1   MAVASEATTSLCSHCGRDIPSTNIDLHSVHCERNLEKCKICGDMVPKRHAEEHFLNTHAS 60
           MAVASE TTS+C+HCGRDIPS NIDLHSVHC RNLEKCKICGDMVPKRHAEEH+LNTHA 
Sbjct: 1   MAVASEETTSICNHCGRDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAP 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR 120
           VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPA+DLAEHQEVCGNRTELCHLCR
Sbjct: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCR 120

Query: 121 RYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRRQPQEFSTRRLI 180
           RYIRLRERYSHENNC+ V AAD +AESSRDVG+AP ER++ R RGARRRQPQEFSTRRLI
Sbjct: 121 RYIRLRERYSHENNCKGVTAADTVAESSRDVGAAP-ERDQVRDRGARRRQPQEFSTRRLI 180

Query: 181 FTIAITGIAVLLGSLFFQKKGENNVVH 207
           FTIAITGIAVLLGSLFFQ+K E+N+VH
Sbjct: 181 FTIAITGIAVLLGSLFFQRKAESNIVH 206

[Close]

BLAST of Cp4.1LG02g03850 vs. ExPASy TrEMBL
Match: A0A1S3CRX9 (XIAP-associated factor 1 OS=Cucumis melo OX=3656 GN=LOC103503642 PE=4 SV=1)

HSP 1 Score: 379 bits (972), Expect = 3.69e-132
Identity = 181/207 (87.44%), Postives = 193/207 (93.24%), Query Frame = 0


Query: 1   MAVASEATTSLCSHCGRDIPSTNIDLHSVHCERNLEKCKICGDMVPKRHAEEHFLNTHAS 60
           MAVASE TTS+C+HCGRDIPS+NIDLHSVHC RNLEKCKICGDMVPKRHAEEHFLNTHA 
Sbjct: 1   MAVASEETTSICNHCGRDIPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAP 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR 120
           VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELC LCR
Sbjct: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCPLCR 120

Query: 121 RYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRRQPQEFSTRRLI 180
            YIRLRERY+HENNC+ +  ADNIAESSRDVG+AP    +AR RGA+RRQPQEFSTRRLI
Sbjct: 121 CYIRLRERYNHENNCKGIVPADNIAESSRDVGAAPERDHQARDRGAQRRQPQEFSTRRLI 180

Query: 181 FTIAITGIAVLLGSLFFQKKGENNVVH 207
           FTIAITGIAVLLGSLFFQ+K E+N+VH
Sbjct: 181 FTIAITGIAVLLGSLFFQRKSESNIVH 207

[Close]

BLAST of Cp4.1LG02g03850 vs. TAIR 10
Match: AT1G09920.1 (TRAF-type zinc finger-related )

HSP 1 Score: 275.4 bits (703), Expect = 3.7e-74
Identity = 131/202 (64.85%), Postives = 151/202 (74.75%), Query Frame = 0


Query: 1   MAVASEATTSLCSHCGRDIPSTNIDLHSVHCERNLEKCKICGDMVPKRHAEEHFLNTHAS 60
           M  A+   T +C+HC RDIPS NIDLH VHC RNLEKCKICGDMVPK+HAEEH+LNTHA 
Sbjct: 1   METATGEITIVCNHCDRDIPSLNIDLHRVHCARNLEKCKICGDMVPKKHAEEHYLNTHAP 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR 120
           ++CS+C ET+ER+I   HKGE CP+RIVTCEFCEFPLPA+DLAEHQEVCGNRTELC+ C 
Sbjct: 61  IACSMCKETIEREIFDSHKGEICPKRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCYQCN 120

Query: 121 RYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRRQPQEFSTRRLI 180
            Y+RLRERY+HE  C          ESSR +    P   E  G G RRR     S +RL 
Sbjct: 121 SYVRLRERYNHETKCPGT------VESSRRI----PRAAEGDGNGRRRRDGNGVSNKRLF 180

Query: 181 FTIAITGIAVLLGSLFFQKKGE 203
           FTIAITGIAV++GSLFFQ+K E
Sbjct: 181 FTIAITGIAVIIGSLFFQRKPE 192

[Close]

BLAST of Cp4.1LG02g03850 vs. TAIR 10
Match: AT4G15420.1 (Ubiquitin fusion degradation UFD1 family protein )

HSP 1 Score: 78.2 bits (191), Expect = 8.7e-15
Identity = 45/160 (28.12%), Postives = 72/160 (45.00%), Query Frame = 0


Query: 4   ASEATTSLCSHCGRDIPSTNIDLHSVHCER--------------------NLEKCKICGD 63
           +S+  T  C +C   IPS +I LH V+C R                    N   C+ CG 
Sbjct: 395 SSDVDTVECRNCKHSIPSRSIALHEVYCSRHNVVCNHHGCGIVLRVEEAKNHLHCEKCGK 454

Query: 64  MVPKRHAEEHFLNTHASVSCSLCSETMERDILAIHKGENCPQRIVTCEFC----EFPLPA 123
            +     E+H    H  ++C  C   +E++ +  H+G++CP R++ C FC    E    A
Sbjct: 455 ALQPTEMEKHLKVFHEPLTCG-CGIVLEKEQMVQHQGKDCPLRLIACRFCGDMVEAGNSA 514

Query: 124 ID-------LAEHQEVCGNRTELCHLCRRYIRLRERYSHE 133
            D       ++EH+  CG+RT  C  C R + L++   H+
Sbjct: 515 ADTRDRMRGMSEHESTCGSRTAPCDSCGRSVMLKDMDIHQ 553

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g03850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4R970	5.9e-24	36.22	TRAF-type zinc finger domain-containing protein 1 OS=Macaca fascicularis OX=9541...	[more]
Q99MM4	1.3e-23	33.33	TRAF-type zinc finger domain-containing protein 1 OS=Rattus norvegicus OX=10116 ...	[more]
O14545	2.2e-23	35.43	TRAF-type zinc finger domain-containing protein 1 OS=Homo sapiens OX=9606 GN=TRA...	[more]
Q3UDK1	2.2e-23	32.24	TRAF-type zinc finger domain-containing protein 1 OS=Mus musculus OX=10090 GN=Tr...	[more]
Q58D05	5.0e-23	33.59	TRAF-type zinc finger domain-containing protein 1 OS=Bos taurus OX=9913 GN=TRAFD...	[more]

BLAST of Cp4.1LG02g03850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023524658.1	9.44e-151	100.00	XIAP-associated factor 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022940915.1	1.91e-150	99.03	XIAP-associated factor 1-like [Cucurbita moschata]	[more]
XP_022981055.1	2.23e-149	99.03	XIAP-associated factor 1-like [Cucurbita maxima]	[more]
XP_023534901.1	4.62e-135	88.89	XIAP-associated factor 1-like [Cucurbita pepo subsp. pepo] >KAG6591703.1 XIAP-as...	[more]
XP_022975863.1	6.57e-135	88.89	XIAP-associated factor 1-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG02g03850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FS21	9.23e-151	99.03	XIAP-associated factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111446359 PE=4...	[more]
A0A6J1IYD6	1.08e-149	99.03	XIAP-associated factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111480316 PE=4 S...	[more]
A0A6J1IKG6	3.18e-135	88.89	XIAP-associated factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476436 PE=4 S...	[more]
A0A6J1F858	4.52e-135	88.89	XIAP-associated factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443198 PE=4...	[more]
A0A1S3CRX9	3.69e-132	87.44	XIAP-associated factor 1 OS=Cucumis melo OX=3656 GN=LOC103503642 PE=4 SV=1	[more]

BLAST of Cp4.1LG02g03850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09920.1	3.7e-74	64.85	TRAF-type zinc finger-related	[more]
AT4G15420.1	8.7e-15	28.13	Ubiquitin fusion degradation UFD1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 4..57 e-value: 1.5E-5 score: 26.9
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 58..111 e-value: 9.8E-9 score: 37.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..171
None	No IPR available	PANTHER	PTHR16295	TRAF-TYPE ZINC FINGER PROTEIN-RELATED	coord: 1..206
None	No IPR available	PANTHER	PTHR16295:SF25	XIAP-ASSOCIATED FACTOR 1-LIKE	coord: 1..206

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g03850.1	Cp4.1LG02g03850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding