Cp4.1LG02g01910 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g01910
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	mediator-associated protein 2-like
Location	Cp4.1LG02: 4335333 .. 4337332 (-)
RNA-Seq Expression	Cp4.1LG02g01910
Synteny	Cp4.1LG02g01910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAGTAGTTGCATGTGAATTGTTCGACGAAATGCCCAAATGGAGTTTTCGATTGGTCATGTCTCTTTGCATTTATCTTCTGTTCTGTTATTTGATATTAGACTGTTGTTTTGCTATTTGTTGGTGTAGAGGCTTAATAGCTGTGAGTATGAGCAACGAGGTTGGTGCTGTTAAAAGTGTAGAAGGCTATAAACCCCCACCAGAGTTCGAGGAAGACGACAGGGAATTTCTTACTGATATTTCTTTGTCGGACTCTGTAGAGCTTTGGCTTATTCAATGGCCTGCTAACCAAGTAAGATCATATAAACTAATTTAGGAAAATAGGATAGCTAAGCTACCTTCAATTTGGGAGAAACTAAAATGAATAGCCATCATAAATGTACATTCTTTCAAGATTGAAGTTTGTTGCAGCCATTGGAAATACTGTTTTACTCGAGACGGATTTATTATTTTCTTTATTGCCTACTGTAGGCTCCGGATTTTGATGGCCAAGAATTTTCTCTCCAACATCGTCCTGATGGACATTTGGGCAGCTTTCAGGGTTCATCTGGTAATCATCATTTTATCAGTGATTTACTATGCTACAATCTTGTCATAACAACAAATTTCCTTTACTCTTTGAATTAATCTAGTATCAGTTTTTTTTTAAAAAAAGAAAACAGTTGGTGCATGAATATGCTTGAAGCATGTTTGTTTGAAAGTGATTTACATCTATTCTGTTCTTTTTTTTATAATGAGTTCAATTTATTCGCTGTTTCCATCAAAAGGAAAATCATATGATGTGGTCAGCTGTGTGGCTCAAGAACCTGAGGCTTCTGTCTTTCTACCATCTTCATCAGACACCAGATTAGGTAAATGCCCCATCTTTGTTTTGAATTTGTTTTACGTCACATGTCAGTAGCATCAGTCTCTATCTCTCTTTTTCTTAGTGTTAAACTTGGCTGCACTCATTCTGCACCAGTCCTGCTCTCATCTAGATTACGAGATGGTAGTTTCATCTTTAATACTAATGGTGTTAATACCTGGACTTCTAGCTTTTCCTTTGTCCCCAGTGAACCCCATTCCGTATGTTTTTCACATGCCGGTATGTGCCGATTAGTGCGGTCTAGAACTTTTAATCTACTCCTTCCATTGTCAACGAGGTCGATGCTGGTTCTTCTACTACAAGTCTTAACATTATACTAGACAGCTATAATATGCTAACACTTCATTCAACTTTCTGTCATGTCTAAAACGCTGAACGCAAACGATCAATGTTGGTACTTTGTGCATCTTAATTTGAGTCCAACGTCTCCTGACGTTTGTTCAAATCATGTCATATTCTAGTGGCACAATGTCTAAACTTCTGTGTTTTGATTTGTCCTTTTACTCCTGAAGTTGGAAAGATTGCCCGGCGGATATCTCTCGTGCATTACCCAGAACCTGAAGAACTCGAAAAGGCCACCCCTATGAAATCAGTATATAAAAAATCTTCTGGAATGTCACTGACCACTTCATCTCGTCCAACTACAACATCACGAGGCCCACACTCGAGCAGTAGAAGAACAAGCTCTACACGAAGTAGTAAGCCAAGAAGTTCAATATCTGAATGTGGGGAACCATCAAAGCCTTCAAGTATTAAACAGGAACCAGAACCCTCCGAGTCCAGAGATTATCTGAAAAAGGATTCATCGAAAAGAAAACGTTCACAAGCCTAGTCGATTGACCCGACTAACCACTCTACTCAAGATTGAGGGATGTGATCATAGTGCAGCAACTTTTTCAGGGCCCTCCCGGCTATCCAGTGAAATGTAAAACAAAAAAAGCAAAAGAAATGAATGAGGTGTCTGCAGACTGTATTCATTAGTTTTTGACTGGTTACTAAAGTATGTCTGTACTCTTATTTCCCATTTGTCTTTCCTTGGATTAATTTTGGAGCAGTTTTACGTCATGGGAAGTTGTCTTTTTGATCTGTCATACTAGTTATAGAAAATTCTTCATTAATATATTGTTTATTAATT

mRNA sequence

TGAAGTAGTTGCATGTGAATTGTTCGACGAAATGCCCAAATGGAGTTTTCGATTGGTCATGTCTCTTTGCATTTATCTTCTGTTCTGTTATTTGATATTAGACTGTTGTTTTGCTATTTGTTGGTGTAGAGGCTTAATAGCTGTGAGTATGAGCAACGAGGTTGGTGCTGTTAAAAGTGTAGAAGGCTATAAACCCCCACCAGAGTTCGAGGAAGACGACAGGGAATTTCTTACTGATATTTCTTTGTCGGACTCTGTAGAGCTTTGGCTTATTCAATGGCCTGCTAACCAAGCTCCGGATTTTGATGGCCAAGAATTTTCTCTCCAACATCGTCCTGATGGACATTTGGGCAGCTTTCAGGGTTCATCTGGAAAATCATATGATGTGGTCAGCTGTGTGGCTCAAGAACCTGAGGCTTCTGTCTTTCTACCATCTTCATCAGACACCAGATTAGTCCTGCTCTCATCTAGATTACGAGATGGTAGTTTCATCTTTAATACTAATGGTGTTAATACCTGGACTTCTAGCTTTTCCTTTGTCCCCAGTGAACCCCATTCCGTATGTTTTTCACATGCCGTTGGAAAGATTGCCCGGCGGATATCTCTCGTGCATTACCCAGAACCTGAAGAACTCGAAAAGGCCACCCCTATGAAATCAGTATATAAAAAATCTTCTGGAATGTCACTGACCACTTCATCTCGTCCAACTACAACATCACGAGGCCCACACTCGAGCAGTAGAAGAACAAGCTCTACACGAAGTAGTAAGCCAAGAAGTTCAATATCTGAATGTGGGGAACCATCAAAGCCTTCAAGTATTAAACAGGAACCAGAACCCTCCGAGTCCAGAGATTATCTGAAAAAGGATTCATCGAAAAGAAAACGTTCACAAGCCTAGTCGATTGACCCGACTAACCACTCTACTCAAGATTGAGGGATGTGATCATAGTGCAGCAACTTTTTCAGGGCCCTCCCGGCTATCCAGTGAAATGTAAAACAAAAAAAGCAAAAGAAATGAATGAGGTGTCTGCAGACTGTATTCATTAGTTTTTGACTGGTTACTAAAGTATGTCTGTACTCTTATTTCCCATTTGTCTTTCCTTGGATTAATTTTGGAGCAGTTTTACGTCATGGGAAGTTGTCTTTTTGATCTGTCATACTAGTTATAGAAAATTCTTCATTAATATATTGTTTATTAATT

Coding sequence (CDS)

ATGCCCAAATGGAGTTTTCGATTGGTCATGTCTCTTTGCATTTATCTTCTGTTCTGTTATTTGATATTAGACTGTTGTTTTGCTATTTGTTGGTGTAGAGGCTTAATAGCTGTGAGTATGAGCAACGAGGTTGGTGCTGTTAAAAGTGTAGAAGGCTATAAACCCCCACCAGAGTTCGAGGAAGACGACAGGGAATTTCTTACTGATATTTCTTTGTCGGACTCTGTAGAGCTTTGGCTTATTCAATGGCCTGCTAACCAAGCTCCGGATTTTGATGGCCAAGAATTTTCTCTCCAACATCGTCCTGATGGACATTTGGGCAGCTTTCAGGGTTCATCTGGAAAATCATATGATGTGGTCAGCTGTGTGGCTCAAGAACCTGAGGCTTCTGTCTTTCTACCATCTTCATCAGACACCAGATTAGTCCTGCTCTCATCTAGATTACGAGATGGTAGTTTCATCTTTAATACTAATGGTGTTAATACCTGGACTTCTAGCTTTTCCTTTGTCCCCAGTGAACCCCATTCCGTATGTTTTTCACATGCCGTTGGAAAGATTGCCCGGCGGATATCTCTCGTGCATTACCCAGAACCTGAAGAACTCGAAAAGGCCACCCCTATGAAATCAGTATATAAAAAATCTTCTGGAATGTCACTGACCACTTCATCTCGTCCAACTACAACATCACGAGGCCCACACTCGAGCAGTAGAAGAACAAGCTCTACACGAAGTAGTAAGCCAAGAAGTTCAATATCTGAATGTGGGGAACCATCAAAGCCTTCAAGTATTAAACAGGAACCAGAACCCTCCGAGTCCAGAGATTATCTGAAAAAGGATTCATCGAAAAGAAAACGTTCACAAGCCTAG

Protein sequence

MPKWSFRLVMSLCIYLLFCYLILDCCFAICWCRGLIAVSMSNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQHRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVLLSSRLRDGSFIFNTNGVNTWTSSFSFVPSEPHSVCFSHAVGKIARRISLVHYPEPEELEKATPMKSVYKKSSGMSLTTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKPSSIKQEPEPSESRDYLKKDSSKRKRSQA

Homology

[Close]

BLAST of Cp4.1LG02g01910 vs. ExPASy Swiss-Prot
Match: F4KF27 (Mediator-associated protein 2 OS=Arabidopsis thaliana OX=3702 GN=At5g64680 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.2e-05
Identity = 67/243 (27.57%), Postives = 94/243 (38.68%), Query Frame = 0


Query: 53  YKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQHRPDGHLGSFQGS 112
           +K   +F     E L D  L+ S E WLIQ P  Q P+ +     ++   DG  G F+ S
Sbjct: 5   FKVSGDFIVSGAEQLDDTDLTRSDEFWLIQAPLGQFPEIEENTLKIEPDKDGLFGEFKDS 64

Query: 113 S--------GKSYDVVSCVAQEPEASVFLPSSSDTRLVLLSSRLRDGSFIFNTNGVNTWT 172
           +        G  YD+ S  +Q+  A + +PS                             
Sbjct: 65  NAGSLHLCLGAKYDLASFHSQDAGAELIIPSEE--------------------------- 124

Query: 173 SSFSFVPSEPHSVCFSHAVGKIARRISLVHYPEPEELEKATPMKSVYKKSSGMSLTTSSR 232
                          S  VGKI RR++LV YPEP EL     MK+  ++    S+T SS+
Sbjct: 125 ---------------SMIVGKITRRVALVRYPEPNEL--LQKMKARTQQKLVGSVTNSSK 184

Query: 233 PTTTSRGPHSSSRRTSSTRSSKPRSSISECGE-PSKPSSIKQEPEPSESRDYLKKDSSKR 287
            ++       SSR  S TRSS+ +S  S   E P  P     E    + R      S   
Sbjct: 185 KSSNLT---QSSRHKSGTRSSREKSMFSGFTETPKSPKRKNSESSSGKHRSSTSTVSGSS 200

[Close]

BLAST of Cp4.1LG02g01910 vs. NCBI nr
Match: KAG7037421.1 (Mediator-associated protein 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 374 bits (961), Expect = 9.11e-129
Identity = 208/249 (83.53%), Postives = 208/249 (83.53%), Query Frame = 0


Query: 40  MSNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 99
           MSNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ
Sbjct: 1   MSNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 60

Query: 100 HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVLLSSRLRDGSFIFNTNG 159
           HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLV                 
Sbjct: 61  HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLV----------------- 120

Query: 160 VNTWTSSFSFVPSEPHSVCFSHAVGKIARRISLVHYPEPEELEKATPMKSVYKKSSGMSL 219
                                   GKIARRISLVHYPEPEELEKATPMKSVYKKSSGMSL
Sbjct: 121 ------------------------GKIARRISLVHYPEPEELEKATPMKSVYKKSSGMSL 180

Query: 220 TTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKPSSIKQEPEPSESRDYLKKD 279
           TTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKPSSIKQEPEPSESRDYLKKD
Sbjct: 181 TTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKPSSIKQEPEPSESRDYLKKD 208

Query: 280 SSKRKRSQA 288
           SSKRKRSQA
Sbjct: 241 SSKRKRSQA 208

[Close]

BLAST of Cp4.1LG02g01910 vs. NCBI nr
Match: XP_022940917.1 (mediator-associated protein 2-like [Cucurbita moschata])

HSP 1 Score: 372 bits (956), Expect = 5.26e-128
Identity = 207/249 (83.13%), Postives = 207/249 (83.13%), Query Frame = 0


Query: 40  MSNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 99
           M NEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ
Sbjct: 1   MRNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 60

Query: 100 HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVLLSSRLRDGSFIFNTNG 159
           HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLV                 
Sbjct: 61  HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLV----------------- 120

Query: 160 VNTWTSSFSFVPSEPHSVCFSHAVGKIARRISLVHYPEPEELEKATPMKSVYKKSSGMSL 219
                                   GKIARRISLVHYPEPEELEKATPMKSVYKKSSGMSL
Sbjct: 121 ------------------------GKIARRISLVHYPEPEELEKATPMKSVYKKSSGMSL 180

Query: 220 TTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKPSSIKQEPEPSESRDYLKKD 279
           TTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKPSSIKQEPEPSESRDYLKKD
Sbjct: 181 TTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKPSSIKQEPEPSESRDYLKKD 208

Query: 280 SSKRKRSQA 288
           SSKRKRSQA
Sbjct: 241 SSKRKRSQA 208

[Close]

BLAST of Cp4.1LG02g01910 vs. NCBI nr
Match: KAG6607894.1 (Mediator-associated protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 372 bits (955), Expect = 7.46e-128
Identity = 207/249 (83.13%), Postives = 207/249 (83.13%), Query Frame = 0


Query: 40  MSNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 99
           MSNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ
Sbjct: 1   MSNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 60

Query: 100 HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVLLSSRLRDGSFIFNTNG 159
           HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLV                 
Sbjct: 61  HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLV----------------- 120

Query: 160 VNTWTSSFSFVPSEPHSVCFSHAVGKIARRISLVHYPEPEELEKATPMKSVYKKSSGMSL 219
                                   GKIARRISLVHYPEPEELEKATPMKSVYKKSSGMS 
Sbjct: 121 ------------------------GKIARRISLVHYPEPEELEKATPMKSVYKKSSGMSQ 180

Query: 220 TTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKPSSIKQEPEPSESRDYLKKD 279
           TTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKPSSIKQEPEPSESRDYLKKD
Sbjct: 181 TTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKPSSIKQEPEPSESRDYLKKD 208

Query: 280 SSKRKRSQA 288
           SSKRKRSQA
Sbjct: 241 SSKRKRSQA 208

[Close]

BLAST of Cp4.1LG02g01910 vs. NCBI nr
Match: XP_022981239.1 (LOW QUALITY PROTEIN: mediator-associated protein 2-like [Cucurbita maxima])

HSP 1 Score: 369 bits (946), Expect = 7.47e-126
Identity = 204/246 (82.93%), Postives = 205/246 (83.33%), Query Frame = 0


Query: 40  MSNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 99
           MSN+VGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ
Sbjct: 1   MSNKVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 60

Query: 100 HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVLLSSRLRDGSFIFNTNG 159
           HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLV                 
Sbjct: 61  HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLV----------------- 120

Query: 160 VNTWTSSFSFVPSEPHSVCFSHAVGKIARRISLVHYPEPEELEKATPMKSVYKKSSGMSL 219
                                   GKIARRISLVHYPEPEELEKATPMKSVYKKSSGMSL
Sbjct: 121 ------------------------GKIARRISLVHYPEPEELEKATPMKSVYKKSSGMSL 180

Query: 220 TTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKPSSIKQEPEPSESRDYLKKD 279
           TTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKPSSIKQEPEPSESRDYLKKD
Sbjct: 181 TTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKPSSIKQEPEPSESRDYLKKD 205

Query: 280 SSKRKR 285
           SSKRKR
Sbjct: 241 SSKRKR 205

[Close]

BLAST of Cp4.1LG02g01910 vs. NCBI nr
Match: XP_038896123.1 (mediator-associated protein 2 [Benincasa hispida])

HSP 1 Score: 305 bits (782), Expect = 5.51e-101
Identity = 177/246 (71.95%), Postives = 187/246 (76.02%), Query Frame = 0


Query: 40  MSNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 99
           M NEV A  SVEGYKPP EFEED REFLTDISLS+S ELWLIQWPANQAPDFDGQEFSLQ
Sbjct: 1   MINEVDAFISVEGYKPPAEFEEDKREFLTDISLSNSEELWLIQWPANQAPDFDGQEFSLQ 60

Query: 100 HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVLLSSRLRDGSFIFNTNG 159
             PDG LGSFQGSSGKSYDVVSC+AQ PEASVFLPSSSDTRLV                 
Sbjct: 61  LHPDGRLGSFQGSSGKSYDVVSCLAQVPEASVFLPSSSDTRLV----------------- 120

Query: 160 VNTWTSSFSFVPSEPHSVCFSHAVGKIARRISLVHYPEPEELEKATPMKSVYKKSSGMSL 219
                                   GKI+RRISLVHYPEPEELEKATPMKS+Y+KSSG SL
Sbjct: 121 ------------------------GKISRRISLVHYPEPEELEKATPMKSLYQKSSGTSL 180

Query: 220 TTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKPSSIKQEPEPSESRDYLKKD 279
           T +SR TTTSRGPHSSSRRTSS+RSSKPRSS+SE  EPSKPS +KQEPEP+ESRDYLKKD
Sbjct: 181 T-NSRQTTTSRGPHSSSRRTSSSRSSKPRSSVSEFEEPSKPSIVKQEPEPTESRDYLKKD 204

Query: 280 SSKRKR 285
           SSKR R
Sbjct: 241 SSKRNR 204

[Close]

BLAST of Cp4.1LG02g01910 vs. ExPASy TrEMBL
Match: A0A6J1FKY5 (mediator-associated protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111446361 PE=4 SV=1)

HSP 1 Score: 372 bits (956), Expect = 2.55e-128
Identity = 207/249 (83.13%), Postives = 207/249 (83.13%), Query Frame = 0


Query: 40  MSNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 99
           M NEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ
Sbjct: 1   MRNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 60

Query: 100 HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVLLSSRLRDGSFIFNTNG 159
           HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLV                 
Sbjct: 61  HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLV----------------- 120

Query: 160 VNTWTSSFSFVPSEPHSVCFSHAVGKIARRISLVHYPEPEELEKATPMKSVYKKSSGMSL 219
                                   GKIARRISLVHYPEPEELEKATPMKSVYKKSSGMSL
Sbjct: 121 ------------------------GKIARRISLVHYPEPEELEKATPMKSVYKKSSGMSL 180

Query: 220 TTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKPSSIKQEPEPSESRDYLKKD 279
           TTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKPSSIKQEPEPSESRDYLKKD
Sbjct: 181 TTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKPSSIKQEPEPSESRDYLKKD 208

Query: 280 SSKRKRSQA 288
           SSKRKRSQA
Sbjct: 241 SSKRKRSQA 208

[Close]

BLAST of Cp4.1LG02g01910 vs. ExPASy TrEMBL
Match: A0A6J1J1C8 (LOW QUALITY PROTEIN: mediator-associated protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111480436 PE=4 SV=1)

HSP 1 Score: 369 bits (946), Expect = 3.62e-126
Identity = 204/246 (82.93%), Postives = 205/246 (83.33%), Query Frame = 0


Query: 40  MSNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 99
           MSN+VGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ
Sbjct: 1   MSNKVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 60

Query: 100 HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVLLSSRLRDGSFIFNTNG 159
           HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLV                 
Sbjct: 61  HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLV----------------- 120

Query: 160 VNTWTSSFSFVPSEPHSVCFSHAVGKIARRISLVHYPEPEELEKATPMKSVYKKSSGMSL 219
                                   GKIARRISLVHYPEPEELEKATPMKSVYKKSSGMSL
Sbjct: 121 ------------------------GKIARRISLVHYPEPEELEKATPMKSVYKKSSGMSL 180

Query: 220 TTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKPSSIKQEPEPSESRDYLKKD 279
           TTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKPSSIKQEPEPSESRDYLKKD
Sbjct: 181 TTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKPSSIKQEPEPSESRDYLKKD 205

Query: 280 SSKRKR 285
           SSKRKR
Sbjct: 241 SSKRKR 205

[Close]

BLAST of Cp4.1LG02g01910 vs. ExPASy TrEMBL
Match: A0A0A0L047 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G629490 PE=4 SV=1)

HSP 1 Score: 298 bits (762), Expect = 3.00e-98
Identity = 172/247 (69.64%), Postives = 191/247 (77.33%), Query Frame = 0


Query: 40  MSNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 99
           MS+EV A+K+VEGYKPP EFEED REFLTDISL+DS ELWLIQWPANQAPDFDGQEFSLQ
Sbjct: 1   MSSEVDALKNVEGYKPPAEFEEDKREFLTDISLTDSEELWLIQWPANQAPDFDGQEFSLQ 60

Query: 100 HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVLLSSRLRDGSFIFNTNG 159
             PDGH+GSFQGSSGKSYDV+SCVAQEPEASVFLPSSSDTRLV                 
Sbjct: 61  LHPDGHMGSFQGSSGKSYDVISCVAQEPEASVFLPSSSDTRLV----------------- 120

Query: 160 VNTWTSSFSFVPSEPHSVCFSHAVGKIARRISLVHYPEPEELEKAT-PMKSVYKKSSGMS 219
                                   GKI+RRISLVHYPEPEELEKAT P+KS+Y+KSSG+S
Sbjct: 121 ------------------------GKISRRISLVHYPEPEELEKATIPLKSLYQKSSGIS 180

Query: 220 LTTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKPSSIKQEPEPSESRDYLKK 279
           LT +SR TTTSRGPHSSSRRT+S+RSSKPRSS+SE  EPSK SS+KQE E +ESRD+ +K
Sbjct: 181 LT-NSRQTTTSRGPHSSSRRTTSSRSSKPRSSVSEFTEPSKTSSVKQELESTESRDHKRK 205

Query: 280 DSSKRKR 285
           DSSKRKR
Sbjct: 241 DSSKRKR 205

[Close]

BLAST of Cp4.1LG02g01910 vs. ExPASy TrEMBL
Match: A0A6J1INX8 (mediator-associated protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111476933 PE=4 SV=1)

HSP 1 Score: 293 bits (749), Expect = 6.72e-97
Identity = 169/246 (68.70%), Postives = 184/246 (74.80%), Query Frame = 0


Query: 40  MSNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 99
           MS+EV A KSVE YKPPPEFEED REFLTD+SLS+  ELWLIQWPANQ+PDFDGQE SLQ
Sbjct: 1   MSSEVDACKSVERYKPPPEFEEDKREFLTDMSLSNCAELWLIQWPANQSPDFDGQEISLQ 60

Query: 100 HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVLLSSRLRDGSFIFNTNG 159
             PDGHLGSF GSSGKSYDVVSCVAQEPEASVFLPSSSD++LV                 
Sbjct: 61  LHPDGHLGSFNGSSGKSYDVVSCVAQEPEASVFLPSSSDSKLVR---------------- 120

Query: 160 VNTWTSSFSFVPSEPHSVCFSHAVGKIARRISLVHYPEPEELEKATPMKSVYKKSSGMSL 219
                                    KI RRISLVHYP+PEELEKATP+KSVYKKSSG+SL
Sbjct: 121 -------------------------KIIRRISLVHYPKPEELEKATPLKSVYKKSSGISL 180

Query: 220 TTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKPSSIKQEPEPSESRDYLKKD 279
              SR TTTSRGP+SSSRRTSSTRSSKPRSS+SE  EPSKP S+KQ+PEP+ESRD+  KD
Sbjct: 181 ---SRQTTTSRGPNSSSRRTSSTRSSKPRSSVSEFEEPSKPLSVKQKPEPTESRDHSPKD 202

Query: 280 SSKRKR 285
           SSKRKR
Sbjct: 241 SSKRKR 202

[Close]

BLAST of Cp4.1LG02g01910 vs. ExPASy TrEMBL
Match: A0A6J1FBH2 (mediator-associated protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111442553 PE=4 SV=1)

HSP 1 Score: 292 bits (748), Expect = 9.53e-97
Identity = 169/246 (68.70%), Postives = 183/246 (74.39%), Query Frame = 0


Query: 40  MSNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 99
           MSNEV A +SVE YKPPPEFEED RE LTD+SLS+  ELWLIQWPANQAPDFDGQE SLQ
Sbjct: 1   MSNEVDACRSVERYKPPPEFEEDKRELLTDMSLSNCAELWLIQWPANQAPDFDGQELSLQ 60

Query: 100 HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVLLSSRLRDGSFIFNTNG 159
             PDGHLGSF GSSGKSYDVVSCVAQEPEASVFLPSSSD++LV                 
Sbjct: 61  LHPDGHLGSFNGSSGKSYDVVSCVAQEPEASVFLPSSSDSKLVR---------------- 120

Query: 160 VNTWTSSFSFVPSEPHSVCFSHAVGKIARRISLVHYPEPEELEKATPMKSVYKKSSGMSL 219
                                    KI RRISLVHYP+PEELEKATP+KSVYKKSSG+SL
Sbjct: 121 -------------------------KIIRRISLVHYPKPEELEKATPLKSVYKKSSGISL 180

Query: 220 TTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKPSSIKQEPEPSESRDYLKKD 279
              SR TTTSRGP+SSSRRTSSTRSSKPRSS+SE  EPSKP S+KQ+PEP+ESRD+  KD
Sbjct: 181 ---SRQTTTSRGPNSSSRRTSSTRSSKPRSSVSEFEEPSKPLSVKQKPEPTESRDHSPKD 202

Query: 280 SSKRKR 285
           SSKRKR
Sbjct: 241 SSKRKR 202

[Close]

BLAST of Cp4.1LG02g01910 vs. TAIR 10
Match: AT5G64680.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 114 Blast hits to 110 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 10; Plants - 37; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). )

HSP 1 Score: 58.5 bits (140), Expect = 1.0e-08
Identity = 67/235 (28.51%), Postives = 94/235 (40.00%), Query Frame = 0


Query: 53  YKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQHRPDGHLGSFQGS 112
           +K   +F     E L D  L+ S E WLIQ P  Q P+ +     ++   DG  G F+ S
Sbjct: 5   FKVSGDFIVSGAEQLDDTDLTRSDEFWLIQAPLGQFPEIEENTLKIEPDKDGLFGEFKDS 64

Query: 113 SGKSYDVVSCVAQEPEASVFLPSSSDTRLVLLSSRLRDGSFIFNTNGVNTWTSSFSFVPS 172
           +G  YD+ S  +Q+  A + +PS                                     
Sbjct: 65  NGAKYDLASFHSQDAGAELIIPSEE----------------------------------- 124

Query: 173 EPHSVCFSHAVGKIARRISLVHYPEPEELEKATPMKSVYKKSSGMSLTTSSRPTTTSRGP 232
                  S  VGKI RR++LV YPEP EL     MK+  ++    S+T SS+ ++     
Sbjct: 125 -------SMIVGKITRRVALVRYPEPNEL--LQKMKARTQQKLVGSVTNSSKKSSNLT-- 184

Query: 233 HSSSRRTSSTRSSKPRSSISECGE-PSKPSSIKQEPEPSESRDYLKKDSSKRKRS 287
             SSR  S TRSS+ +S  S   E P  P     E    + R      S   +RS
Sbjct: 185 -QSSRHKSGTRSSREKSMFSGFTETPKSPKRKNSESSSGKHRSSTSTVSGSSERS 192

[Close]

BLAST of Cp4.1LG02g01910 vs. TAIR 10
Match: AT5G64680.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 58.5 bits (140), Expect = 1.0e-08
Identity = 67/235 (28.51%), Postives = 94/235 (40.00%), Query Frame = 0


Query: 53  YKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQHRPDGHLGSFQGS 112
           +K   +F     E L D  L+ S E WLIQ P  Q P+ +     ++   DG  G F+ S
Sbjct: 5   FKVSGDFIVSGAEQLDDTDLTRSDEFWLIQAPLGQFPEIEENTLKIEPDKDGLFGEFKDS 64

Query: 113 SGKSYDVVSCVAQEPEASVFLPSSSDTRLVLLSSRLRDGSFIFNTNGVNTWTSSFSFVPS 172
           +G  YD+ S  +Q+  A + +PS                                     
Sbjct: 65  NGAKYDLASFHSQDAGAELIIPSEE----------------------------------- 124

Query: 173 EPHSVCFSHAVGKIARRISLVHYPEPEELEKATPMKSVYKKSSGMSLTTSSRPTTTSRGP 232
                  S  VGKI RR++LV YPEP EL     MK+  ++    S+T SS+ ++     
Sbjct: 125 -------SMIVGKITRRVALVRYPEPNEL--LQKMKARTQQKLVGSVTNSSKKSSNLT-- 184

Query: 233 HSSSRRTSSTRSSKPRSSISECGE-PSKPSSIKQEPEPSESRDYLKKDSSKRKRS 287
             SSR  S TRSS+ +S  S   E P  P     E    + R      S   +RS
Sbjct: 185 -QSSRHKSGTRSSREKSMFSGFTETPKSPKRKNSESSSGKHRSSTSTVSGSSERS 192

[Close]

BLAST of Cp4.1LG02g01910 vs. TAIR 10
Match: AT5G64680.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 53 Blast hits to 53 proteins in 20 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 51.2 bits (121), Expect = 1.6e-06
Identity = 67/243 (27.57%), Postives = 94/243 (38.68%), Query Frame = 0


Query: 53  YKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQHRPDGHLGSFQGS 112
           +K   +F     E L D  L+ S E WLIQ P  Q P+ +     ++   DG  G F+ S
Sbjct: 5   FKVSGDFIVSGAEQLDDTDLTRSDEFWLIQAPLGQFPEIEENTLKIEPDKDGLFGEFKDS 64

Query: 113 S--------GKSYDVVSCVAQEPEASVFLPSSSDTRLVLLSSRLRDGSFIFNTNGVNTWT 172
           +        G  YD+ S  +Q+  A + +PS                             
Sbjct: 65  NAGSLHLCLGAKYDLASFHSQDAGAELIIPSEE--------------------------- 124

Query: 173 SSFSFVPSEPHSVCFSHAVGKIARRISLVHYPEPEELEKATPMKSVYKKSSGMSLTTSSR 232
                          S  VGKI RR++LV YPEP EL     MK+  ++    S+T SS+
Sbjct: 125 ---------------SMIVGKITRRVALVRYPEPNEL--LQKMKARTQQKLVGSVTNSSK 184

Query: 233 PTTTSRGPHSSSRRTSSTRSSKPRSSISECGE-PSKPSSIKQEPEPSESRDYLKKDSSKR 287
            ++       SSR  S TRSS+ +S  S   E P  P     E    + R      S   
Sbjct: 185 KSSNLT---QSSRHKSGTRSSREKSMFSGFTETPKSPKRKNSESSSGKHRSSTSTVSGSS 200

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g01910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4KF27	2.2e-05	27.57	Mediator-associated protein 2 OS=Arabidopsis thaliana OX=3702 GN=At5g64680 PE=1 ...	[more]

BLAST of Cp4.1LG02g01910 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7037421.1	9.11e-129	83.53	Mediator-associated protein 2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022940917.1	5.26e-128	83.13	mediator-associated protein 2-like [Cucurbita moschata]	[more]
KAG6607894.1	7.46e-128	83.13	Mediator-associated protein 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022981239.1	7.47e-126	82.93	LOW QUALITY PROTEIN: mediator-associated protein 2-like [Cucurbita maxima]	[more]
XP_038896123.1	5.51e-101	71.95	mediator-associated protein 2 [Benincasa hispida]	[more]

BLAST of Cp4.1LG02g01910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FKY5	2.55e-128	83.13	mediator-associated protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111446361...	[more]
A0A6J1J1C8	3.62e-126	82.93	LOW QUALITY PROTEIN: mediator-associated protein 2-like OS=Cucurbita maxima OX=3...	[more]
A0A0A0L047	3.00e-98	69.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G629490 PE=4 SV=1	[more]
A0A6J1INX8	6.72e-97	68.70	mediator-associated protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111476933 P...	[more]
A0A6J1FBH2	9.53e-97	68.70	mediator-associated protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111442553...	[more]

BLAST of Cp4.1LG02g01910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64680.1	1.0e-08	28.51	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G64680.2	1.0e-08	28.51	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G64680.3	1.6e-06	27.57	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..265
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..288
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 266..288
IPR038823	Mediator-associated protein 2, plant	PANTHER	PTHR36407	MEDIATOR-ASSOCIATED PROTEIN 2	coord: 40..283

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g01910.1	Cp4.1LG02g01910.1	mRNA