Cp4.1LG02g00120 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g00120
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	PHD finger protein EHD3-like
Location	Cp4.1LG02: 5824985 .. 5834583 (+)
RNA-Seq Expression	Cp4.1LG02g00120
Synteny	Cp4.1LG02g00120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAGACCGCTGGTTTAACCAAAAAGAACTTCTTCTACTGCTCTCCCGCCTCTCGGATTTTGGAGTTTCCATTTCAGTTTCCATTTCTTGTCGCCGCATTTTCCTTGCTCAAGTATGTCTCTCTTTCTCCTTCTCCTTCCTCTTTGTTTTGTTTGTTATCTTTCAAATTCATTTCTGTTTCGCATCTGTTTGGTTGCTGACAAAATCGTGCTGAAAAACACAGAAGAATGGAGTGTTTTCGAATTTTGTAGCTTCTTTATTCAGCATTTTGTTTTGGAGCTACTGGATTTGTTTGAATTAGCTGCTTGTTTGTTGACTATGTTGAGCTTAAGGTTTTTCCCGGTCAGGGGAAGTTGCAGAGGGGATTTTAGTGATAGTGGTATATGTTTTTTGTTGTGTTCATTAATGGAGAAAATTTCTCCCGGTGAACTAAGTGTGTTTTTTCGGTTTCTATCAAGTACCAATTAGTTTTGCGAAGCTTGGGTGTGGAGAATTTTCAGAATCTGTAACACATGCGACTATCGGAACCCTAATCCTGTCCGGAATTAGGGTTTTCTTCGTGCTGTTTAGATGGTTATTGAAGATGGGGAAAGCAATGGGAATTGCACGGGACGCCCTTTGGAGGTCAAGTTCATGAAGAGCGTGGCAGGAAAAAATGGAATCGGGATGGGGGTTTTGAATGTTGTAACTGAAGGGGTTCCAGGAACTAGCGATGGTTTTCGAACTTACAAGCGGCGGAAGCAGACGAAGTTGGCTTTTGGGAGCGAATGCAAGGGAGATGGCAAGGTTCATGTTGAAGCTGCTAGTCAACTAGTAGTCCAGGTTTCTCTCTCTCTTTCAATCTATCGCCCTTTCAATTAATCATGCGCACCTATTCAGTATACTCCAAATTAATTCTTGTTGATTTAGTGTTGTTTGTTGGATTTAATCTTGGCTATGCGTACTTGCATTCAAGACTGGAAGTTCTATGAAATCTAACTGACTATGAATCGTGTTGAATTCATAAAGTATCAGGGAAAAGTTAGAACTTGATATTTTTGGATTCTACTCACAGAACTTGAACTGTGGACATTATATAAAATGTAATGATATCTACTTTAAATGAAAATGTTCTCAAGGTAAAAGGAGGGTGGATAGGAAAAGTTGTCAATCTGCTTTCAAATTCATCAATATATACTGCCCCATACTAGGTGGTAAACATTTAGGTGAACTGATAAATTTTTTGTCAGATGGTAGGAGACTTGGAATGTATTGTTGCAGCAACCAGATTTGGTGCGATGAAACCCTTCAAGAATATTCTTTTGCTTTAGGAATTTGTAAGAATTAATGCTTTTGATTGTGTTCTGGGGTAAAGAAAATGGGTCAGTTGTTATATTATTTTGAAACGTATCAAGGATTAGATATGTAAATCCATGGATGTATTAACTTTAAGTTTTTGTAGATCTTTAGTGGATATTTTATCCAGTCCTTGTTGTAATTTTGCCTTGTTAATAGTTATTTTTAAAAAAGAAACTTTCTGTTCATCAATAAAAATACAATTGTGATGAGTTAACCATTGATTTTTTTTTTTTTTCCTAATTGCAATTTTTGAAGTGATTGCGGACAAGTTCCTTGATAATTCTGTTGTTCAGGAAACATTTTTCAAATTTTCCAATGGGATTTATTTGTCTCACGATCACCAAAAAGAGAATGTTTAATAGGATTGTGCTACTTTTTTTTGGAGAGAAACTTGGTGGTATTCAGTTTACTTGAAACAGGATAAAGTTGTTTAAAAGGATCCTATTATTCACCCGACCATCCAAGGAAGTTGTTTAAAAGGCCAAATTCTTTTGGTTAATTGAATACCACCAAGTTTCTTTTAGTTAATTGGACTCCTGCAATTGTTAGAAATTTTCTTAGGGTGGAAGAGGAATATTTTAGACATAGGAGTTTGAATACGCTTGACTCAGAAACACAAATATAGAGATGCTATATGAAATGGCATTTATATATTGACACATTATTTTGAAAAATGAGGACTTTGTTGAACGAAAGGACATAAAAATAGAGTATTTTTCTATGTATATATCTATAAAAATATTTAAACATGGCTATCTATTTATCTTTCAACAAGGATTTTTTTAATGAGGTTATCTGTGTTTTCTTATTGCATGATCCAGTTCCTAATCATATTATCTCTTTTCTCTTTCTAACGCCAATGTGTCATTATCTTCAGAAACATTTAGGTGCTTTTTGTTGTTGCTGGTATTTGTGGTTTTGGGTCTAATTTGTTATTCCATTGGGAGACTTTGCGTGCTCCAACACTAGCTTTGGAGACGTCAAGAACTTCCATTTATCAGTTCTCCATTTCGATGTTTGAACCAAAGACCTTGATAATCTTCTCCAAACATCCCAAATCCTTATCAATGGTGCTGCTCCTTGGGGGCCATTGGGCAGTGTGTTACACATTCCTTGGATGGTCAAGGACAAAAAGGAAGTTTTTTGGATTTGTCATATTTTCCTACCTTATGGGCAGTTTGGTTGTAGATAAATAAAACAAATCTCGAAAGTTTAGAGGAATCTTTGGATGAAGTATGATTTTTCGTTTTTATCATATAGTTACTGTTATACAAATAAAATGAAGAAACATCTGATTTACATAAAGTTATTTGACGAAACAGACCAAAAATAAAATTCTCTCTACATCTTTGAACGTTTAGATGCTTTGGTATGTGGTCTGTTGGTTTTTTCTTGTCTCATTCTATTTCCATTTGTTGCAGACTGTTCAAGAAACTTTATACACGCTAAGAGGCAGTAACTCCTGTGATCATGTCCATTCTCCAATGGTCAATTTAGATGAGTGCCCAGAGGACCTCTGGAGATCTGTTTTGTTACAGCAGATATACCAGTCATCAAGTGTCAACGGAGGCAATGTACCAATGTGTGTTCACGATGGCCTTGCTTCTCATTCAGGAGCCAATGACCCCTCAAGATTTAAGGTTAGTTTAAAACATGTTTTTCATGCAGATCTTGTTATGTAGGTTTCCCTTCTTTCTTTCTTTCTTTCTTCCTTTTTTTATTTGTTCGGTTTTTAAAATAATCTTGGTTCTCCTTCTGTGATTGTTGTGCAGATATTTGATGCTCAACATGGAAATAGCAATATTGACCTTCTACGTACTGGATCAGTGTCTAGTAGAGTTCAGATGGCATCTCATAAAGAGAATGGTGTTGTATCAAGTGGATCATTAGAAAATTCGAACAGATGTAGTGTTAGCGAGAGTTGCTGGCGAGCTTTCTTTAGTATTATAGATTCACAGAAGTTTATCTCATTGTGTAAGCTTCTATCTGAAAATTTCAGAGGAATCAAGGCTGATAATGTTTTTGACTTTAGTCTTGTAAACTCAAGGATCAAAGAAGGGGCTTATGAAAACTCACCCATGCTCTTCCTCTCTGACGTACAACAGGCAATAATTGATTATCTTGTTCTACTTTTTATTGTTAACATTATGATATATTTTTGCTGAATTTCTTGTGAAACTTCTTAATAAAAGTGCTTGTAAAATGAACTTAATATCTATTTTCTGGGTATATGAGGATCAACTTAATGTTTTTATAATTTTTTCATGTGTAATGCCTGCCCTCTAACCATCTCTGACTGTCCCTAATGTATATTTCAGTCGACATTCCATCGTTCATATTGAAAAAAAGTTGAAAAAACTGTTTGTTTTCTTATATTTTTTTTTCAGCATTCTCTTGGGTTTCATTCTAGGTTCCAAACCTGCTGTTCTCCATTTTTTTTATGATTTATAAACTTGGGGAAATTTGAATACTATTTGTTGGCGTTGGAATTGTACTTTCAACCACAGGTGCACTCCGTTACAATGTTGATTTGCCATTAATAGCAGTTATGTTTGATTTTTTTTCAGATATGGAGAAAGTTTCAAGCAATTGGTACTGAATTGGTATCACTGGCAGAAAGCCTCTCAGACTTTTCCAGAGCCGCTTATCAAGAAAAGGTAAAACAAGTATCTTCAGCAGTTGATAAGATCTTAGAAAAATGGCTTAAGTTACAAGTTTCATCCCCGTCTCCCTTATATAAAATTTTAATCCATTGGGACTAATTCTTACATTTAAAACCATCGTGACTAAATTTTAAACTTTACAAAAAACCACAAAGACCAAATTTGTAATTTAACCTATAAAAATTGTAGACTATATGTTTTAATCATCTGTTTCCTAGTTAAAAGTTGTTTTAAGTGATCCTTCTATCTTATATTCTCTTATAATTTTCAACCTTCCAGGTGGGAGTTTCAGGACGCAATGTATTTGAAGATGGCAAGCATGAGGTAAAAATGTTTGTTTTATTTTGCATTTTGTATTATTGGTTTAAAAAATTGCACAGAAACTTAAAACTATATTACTTTAGTCAAATATGTGAGAATAATGAGGATTGAAACACTTAAGACACCATGTAGTTCTAATACTTTGTCGATTTAAACCAAGTTCCAGTTTTCTAAAATTCACTATATTTTCATGAATATCTGCCATTCTGCTAATATGTGGCTCCACCCATTAAGAGCTAGTAGAACCGTTTGTCTGTCGCCATTGAAGAGGTTGTCACGATTTTGTATGGGGAAGTGGAATGAAAATGGCAGAGAAGAGAGAGTACTGTTTGAGTTCATTCTTCAGCTGAGCCCTATTCTTCATCGGGGCGATGTCAACTTTCCTTTTGTAATCTTCTGCGTCAGAAAAATATCAAGTTTATTGTCAACTATCCTAGATGCTATGTGGACTTGCATTCAAATTTTTTGTGAGAAAGTAGAGCACTGGATGTATGGATACCCGTGAATTTGGGATGGGGATGGGATATTCAAGGTTTCATGTAGCTGTAGGTTAAGTTTGAGACTGGACACTTAGCGACGGTGAATTTTCCTTGGCTTGGTTCATCCTTTATATTCACGACCACCATTTACCACTTTCTTCAATGGTTCCTCTAAGTGACTCCTCGTTTGGATCTTGGGATCTTGAGGTCCTAGGTCTACCTTCTTAATCATCAACCTCATCTATATAATGTTTCATGCAGGCAGGATTTTCTCACGTCCATCATCCATGTTAAGTAAGGCTATTTTTCATAAGAAGCATATGTACAATATGTCTGTCTTCCAAATACCTAAAAACCAACAGTGTTACTTGTTAGATGGAAAAATTAATAACTTTTCTTTGGAATGCTACAGGGAAGGGAGTTATGTCACGTAGTTAATGGGAATATAATTTCATTACCGTTGGGGAGTGTTAGATTAGGCATTGAAAATTTGAAAGTAGAAACAAGAGGAACTTCTAACAAAATGGCTTTGTAGATTCTAGAAAAAATGTGGTGAACCATGGACTTAGTATTATCTAGTATTCGAGCTTGAGAAGGCTATATCTTTTTGGCCTAGGCTGTTTGGCCTATCCCATTAGTGAGACAAAATGTCTTACCAAAGAGAGGTAAGGTGGGAGCAGTTGGTGGAATATTGTCAAGCTGAAGGGAACACGGAGAATATCTCCTATATTTATTTATTGTGAAACAAAAGTTAGCCTTTAATTACTAAGGACATAAAAAAGAGTACAGCATGAAGCTCCATAACTTTTGATCATCATCCATTGTTTTATTAATAGAGTAACATCTATTTGTTTGATGTAAGGAAGATTATTATTTCCCAAACCAATTGTTTGCCATTTCGATCTCTCGATCCAGATACCCTAAAATTTAGCTTTAAGCTTATTGATCCATAGTACTTTAGCTATTCTTTTAGGCTTATGCCGACATAAGAGATGGAAGATATTATTTTTGACACAAAGTTAAATATCTAGGAGCATCCAAAGCCTTGTATTGGCTCCCACAGTTTTTTGCTAACGGAATAATGAAAAGGTAGATGAGGAAGGTCTTCTCTTTATTAGGTAAGGATACTCTTTGCAATCTGTCAGCAATATTTACCCTCTCCACTGAGAGAGTCCTTGTCAAAATAGTAACCTTTTAAGTATTCTTTATCTTCCATGGCGCAAGCTCAAAACTCTTGGGTATTAAATAGAGGAGCGACAACTAATTCTCTTATTTGAGAAACTGAGCTTTCATTCAAAAAATAAAAGAAAGAAATAGAAAAAGGAAATAAAAGCAAATGGTAGGGTATTCAGGAAGACGACCTAAAAAAGGAGCCTCGAACCTAATTATAGAAAAAGAGGCTTCAGTTCAAGATCATAAGACCCAGTGGATAATTACAGAAATCCTTAGAGACCGATGCCTATATAGAGACATTATACCTAACAAGCCTTCTAATAACACTTCACATCCCTAGATATCTTGTTATTCCTTTCAATCTAGGGGTTCCAAAGAACTACGAAGAAGCCCTGTCACAAGATTTGGCCCCTAGAACAGAAAGGTGGATTACAAAGAACCTCCTCCGCCATAGAGCTGTAAACTTTGCTCCTAGCAAACAGATGTGAAATAGCGAAATAGAACAAATAAATTGACAAAAATATGATCTAGGTCCTCAACCGCTCTCTTCCAAAGAACTCACCTATGTGGATCCACCACGAAGGATGAATGCCTCAAAACACAATTCAGGGTGTTCACCCTTCGACCCAAACTTCCCTAACAAAGAAGTTCACATTTGGGATTTAGCCTTCCACAGTAGGAAAATGAGGGATTTCACATGGTGGGATCACATAAAAGATGGAATGTCATGTTAGGAGCTTCAAGGTCTGATTAGGAACTTCATGGTCTGACTTTTGGGGCCATCTGGCTTATTGTTGGTGGGTTCTCCTACCTCACGAGTCTGGTGATCCAAGCTTTGAAAAGATCAAGAAAGGATGGTTTGCTTTCCTCTCCAAATGGATGTTAGAGGTTTGCAAACGAGAAAATGATCTTTGAAAGAAGCTTGTTAGCATTTATGGTTTAAGAGATCAAGGGTGGGCTGCTAATTAATTGTTTACTAGTATATTAATGAAATATTGTTTTATAAATTAGAACTAACCAATTATCAATTGATTGAATAAATTAGATTATTTATCAGTCAATTGATCTCAACGTACTTTTGCCAACTAAATTAAATTGTTGATCTAAATTAAATAGATTTTATATTAACTTTAATCCGCTTTTATCAGTTAAAATTAATATTTAATATTTATTCTACTATTAAATAAAAAATAAAAAATGAAACTTATTTCCATTGGATTAATATGGCTATGTGGCTATGCCTTGTTGGCTGCTGAACATGTGGATGGGTTTTGAGTACCCATGGGAAAAGAGAAAAATTGCAAACAGCCCATTAGGGAATGCTAAAATGACGAAGCACTAGAGTTGGAGAAGGAAAACTCTTAGACATGGATTTCAATAAATGGTTGGTTCTGCCCATGAAGCTGAGGCACACCGTTCATAGTTGGAGGAACATTAGTGTGGATTAGACTCCTGGGGTACTTTTTCCATGCAAGCCCACCTACTCTTAACTTTAATACTGGAAAGCACATTGTTGGGATGATTGGAAGGGAAATATTCCTAGTAAAGTCAAGTTTTTTTTGTGATCCTTACCTACCATGCTAGTATCTCAACAAAGGTAACAGTTTGCAGAAAAGGACCCATGCTTTTATTCGTTCCAGTTTTGCCTGAATTGTTTGGGAGACCACAAATTGCAATATTCAATAATAGTTAGTTTGTTTATTCCTGCTGGTCTTTTTTATGCTGTGACATTGGGATGGTTTAGTGCTGTCCTAGAGATATCAATACTTTCCTCTCAAGCTTTGCCCGGATGGTTCTATGTTAACCTTTGATGTAACTTCTCTACTTTTTTCATTCTCATTAAATTAGGGGTCTTTTACTACTCCCCTTTGGCTTGGGCCTCCGTGCTCTCTTTTTCTACCCTGGTTCTTCTATTTTAAATAAAATTATTTTTTATTATGCTAAAAAAAGGAATATATCTTTTTAATAAACTAATGACTTCACATTGTAATGTAAATAACTGTAATGAAAATATCAGCAAGTATATCATAATCGGATTTCAACCTCTTGACAATTAAGAACACTTCTAAACCTTGTCCTAGTTATGACTTCACATTGTCCTAAGTGCATTTAAAGGGTTTGTTAACAGCATTGAAACTAATTTTCCAATTGTTCTGAGTTAGGGTTGGATTTTTTAAAATAATTTGTTATTTTTGCTGACATGCAAATTTCTTGTCCATCTAGTTCTCTACGCGGGAATCACCTTCTCATGCTAAAGCAGAGCATATGGATGGTTATGGTGTGTATAAAGTTTGTGCCTGCAGAAGTTGTGGAGAGAAAGCAGAAGGGATTGATTGTCTGGTTTGTGATTCATGCGAGGAAATTTACCATATATCTTGCATCAAACCTCCCGTCAAGGAGATTCCCCTTAAGAGTTGGTTCTGTGCTAGTTGCATTTCAAGTGGATTTAGTTTGTGTCATGAAAACTGTGTAGTATGTGAGAGGTTGAATACGCCCACAATGCTAGCCAATGGAGTTGGTGAAATTCTGGAAACTAGTGAAGTCAATGAGAATCTGAACTGTTGTTTAGATGATGGAATTGAACAACTAAATGACAGCCAAGATTTGGGCCCTTGCAAAATTTGTGGAAATGAAGTAGAAAGTGGTGATAATTTTAGAATATGCAGCCACCTGTTCTGCCCTCACAAATGTTATCACACCAGGTGCTTGACAAAGAAACAGTTAAAATCTTACGATACATGCTGGTACTGCCCTTCTTGTCTTTGCAGAGCATGCCTCATAAATCAAGATGATGACAAGATTGTTTTATGTGATGGCTGCGATCATGGATACCACATTTACTGTATGAGACCACCACTTGCTGAAATTCCAAAAGGAAAATGGTTTTGTAGCAAATGTGAAGCTGGAATCGAGGCAATACGTAGGGTGAAAAGGGCATATGAGAATTTTGAACACAAGCGTAGTAAGAGAGGGAAAGATACATTTGGGGGTTATGGCAATTCAGGCAAGAAACGGATCAATGGAGGCGATCAGGAATCGGATACAGGAAGGAGAGGAATGGACATGCTTCTTACTGCGGCCAAGACCCTAAATTATGAAGAGGGTCTGGCTAACCTTTGATATAAATAGTTGATAAAAGAGGTCTGAAGCACAAATTATTTCATGCTGACTGATTACACATTTTAATCTCTTAGAATTTTGTTTTATTATGTTCATGGACTCGATAGGTTTTGGACATTTAGGCATGCTGACTTTTTGGGAGATTATAACTTGGAATGATGTATGTAGTCTGTGTAAAAGAAACTTGGCACATCTTAAACTGAAGATTCTGAGAAACCAGGACGCTGTTTGATTAAAGGAGATCTAGGTGAGAATCAACCATGTATTGTTTTACTCACTTTGTACCATGAGAGGTATATAATCTCCAAGGATTGGGAGAAGGCTGATGTTTCTGTTCTATTGTAAAATCCATTTAACACAATGACAACTAGAGGAAATGATGCCTTTTGTACGTATTCTTAGGCTTTCTTTAGATATATATTTATTATATTATCATTTGTAATGTATGCTATATTTCGGGATTTTGTATCTAATGTTGACTTCTATGTGTTCTTTCTTCAACATA

mRNA sequence

ATAAGACCGCTGGTTTAACCAAAAAGAACTTCTTCTACTGCTCTCCCGCCTCTCGGATTTTGGAGTTTCCATTTCAGTTTCCATTTCTTGTCGCCGCATTTTCCTTGCTCAATACCAATTAGTTTTGCGAAGCTTGGGTGTGGAGAATTTTCAGAATCTGTAACACATGCGACTATCGGAACCCTAATCCTGTCCGGAATTAGGGTTTTCTTCGTGCTGTTTAGATGGTTATTGAAGATGGGGAAAGCAATGGGAATTGCACGGGACGCCCTTTGGAGGTCAAGTTCATGAAGAGCGTGGCAGGAAAAAATGGAATCGGGATGGGGGTTTTGAATGTTGTAACTGAAGGGGTTCCAGGAACTAGCGATGGTTTTCGAACTTACAAGCGGCGGAAGCAGACGAAGTTGGCTTTTGGGAGCGAATGCAAGGGAGATGGCAAGGTTCATGTTGAAGCTGCTAGTCAACTAGTAGTCCAGACTGTTCAAGAAACTTTATACACGCTAAGAGGCAGTAACTCCTGTGATCATGTCCATTCTCCAATGGTCAATTTAGATGAGTGCCCAGAGGACCTCTGGAGATCTGTTTTGTTACAGCAGATATACCAGTCATCAAGTGTCAACGGAGGCAATGTACCAATGTGTGTTCACGATGGCCTTGCTTCTCATTCAGGAGCCAATGACCCCTCAAGATTTAAGATATTTGATGCTCAACATGGAAATAGCAATATTGACCTTCTACGTACTGGATCAGTGTCTAGTAGAGTTCAGATGGCATCTCATAAAGAGAATGGTGTTGTATCAAGTGGATCATTAGAAAATTCGAACAGATGTAGTGTTAGCGAGAGTTGCTGGCGAGCTTTCTTTAGTATTATAGATTCACAGAAGTTTATCTCATTGTGTAAGCTTCTATCTGAAAATTTCAGAGGAATCAAGGCTGATAATGTTTTTGACTTTAGTCTTGTAAACTCAAGGATCAAAGAAGGGGCTTATGAAAACTCACCCATGCTCTTCCTCTCTGACATATGGAGAAAGTTTCAAGCAATTGGTACTGAATTGGTATCACTGGCAGAAAGCCTCTCAGACTTTTCCAGAGCCGCTTATCAAGAAAAGGTGGGAGTTTCAGGACGCAATGTATTTGAAGATGGCAAGCATGAGTTCTCTACGCGGGAATCACCTTCTCATGCTAAAGCAGAGCATATGGATGGTTATGGTGTGTATAAAGTTTGTGCCTGCAGAAGTTGTGGAGAGAAAGCAGAAGGGATTGATTGTCTGGTTTGTGATTCATGCGAGGAAATTTACCATATATCTTGCATCAAACCTCCCGTCAAGGAGATTCCCCTTAAGAGTTGGTTCTGTGCTAGTTGCATTTCAAGTGGATTTAGTTTGTGTCATGAAAACTGTGTAGTATGTGAGAGGTTGAATACGCCCACAATGCTAGCCAATGGAGTTGGTGAAATTCTGGAAACTAGTGAAGTCAATGAGAATCTGAACTGTTGTTTAGATGATGGAATTGAACAACTAAATGACAGCCAAGATTTGGGCCCTTGCAAAATTTGTGGAAATGAAGTAGAAAGTGGTGATAATTTTAGAATATGCAGCCACCTGTTCTGCCCTCACAAATGTTATCACACCAGGTGCTTGACAAAGAAACAGTTAAAATCTTACGATACATGCTGGTACTGCCCTTCTTGTCTTTGCAGAGCATGCCTCATAAATCAAGATGATGACAAGATTGTTTTATGTGATGGCTGCGATCATGGATACCACATTTACTGTATGAGACCACCACTTGCTGAAATTCCAAAAGGAAAATGGTTTTGTAGCAAATGTGAAGCTGGAATCGAGGCAATACGTAGGGTGAAAAGGGCATATGAGAATTTTGAACACAAGCGTAGTAAGAGAGGGAAAGATACATTTGGGGGTTATGGCAATTCAGGCAAGAAACGGATCAATGGAGGCGATCAGGAATCGGATACAGGAAGGAGAGGAATGGACATGCTTCTTACTGCGGCCAAGACCCTAAATTATGAAGAGGGTCTGGCTAACCTTTGATATAAATAGTTGATAAAAGAGGTCTGAAGCACAAATTATTTCATGCTGACTGATTACACATTTTAATCTCTTAGAATTTTGTTTTATTATGTTCATGGACTCGATAGGTTTTGGACATTTAGGCATGCTGACTTTTTGGGAGATTATAACTTGGAATGATGTATGTAGTCTGTGTAAAAGAAACTTGGCACATCTTAAACTGAAGATTCTGAGAAACCAGGACGCTGTTTGATTAAAGGAGATCTAGGTGAGAATCAACCATGTATTGTTTTACTCACTTTGTACCATGAGAGGTATATAATCTCCAAGGATTGGGAGAAGGCTGATGTTTCTGTTCTATTGTAAAATCCATTTAACACAATGACAACTAGAGGAAATGATGCCTTTTGTACGTATTCTTAGGCTTTCTTTAGATATATATTTATTATATTATCATTTGTAATGTATGCTATATTTCGGGATTTTGTATCTAATGTTGACTTCTATGTGTTCTTTCTTCAACATA

Coding sequence (CDS)

ATGGTTATTGAAGATGGGGAAAGCAATGGGAATTGCACGGGACGCCCTTTGGAGGTCAAGTTCATGAAGAGCGTGGCAGGAAAAAATGGAATCGGGATGGGGGTTTTGAATGTTGTAACTGAAGGGGTTCCAGGAACTAGCGATGGTTTTCGAACTTACAAGCGGCGGAAGCAGACGAAGTTGGCTTTTGGGAGCGAATGCAAGGGAGATGGCAAGGTTCATGTTGAAGCTGCTAGTCAACTAGTAGTCCAGACTGTTCAAGAAACTTTATACACGCTAAGAGGCAGTAACTCCTGTGATCATGTCCATTCTCCAATGGTCAATTTAGATGAGTGCCCAGAGGACCTCTGGAGATCTGTTTTGTTACAGCAGATATACCAGTCATCAAGTGTCAACGGAGGCAATGTACCAATGTGTGTTCACGATGGCCTTGCTTCTCATTCAGGAGCCAATGACCCCTCAAGATTTAAGATATTTGATGCTCAACATGGAAATAGCAATATTGACCTTCTACGTACTGGATCAGTGTCTAGTAGAGTTCAGATGGCATCTCATAAAGAGAATGGTGTTGTATCAAGTGGATCATTAGAAAATTCGAACAGATGTAGTGTTAGCGAGAGTTGCTGGCGAGCTTTCTTTAGTATTATAGATTCACAGAAGTTTATCTCATTGTGTAAGCTTCTATCTGAAAATTTCAGAGGAATCAAGGCTGATAATGTTTTTGACTTTAGTCTTGTAAACTCAAGGATCAAAGAAGGGGCTTATGAAAACTCACCCATGCTCTTCCTCTCTGACATATGGAGAAAGTTTCAAGCAATTGGTACTGAATTGGTATCACTGGCAGAAAGCCTCTCAGACTTTTCCAGAGCCGCTTATCAAGAAAAGGTGGGAGTTTCAGGACGCAATGTATTTGAAGATGGCAAGCATGAGTTCTCTACGCGGGAATCACCTTCTCATGCTAAAGCAGAGCATATGGATGGTTATGGTGTGTATAAAGTTTGTGCCTGCAGAAGTTGTGGAGAGAAAGCAGAAGGGATTGATTGTCTGGTTTGTGATTCATGCGAGGAAATTTACCATATATCTTGCATCAAACCTCCCGTCAAGGAGATTCCCCTTAAGAGTTGGTTCTGTGCTAGTTGCATTTCAAGTGGATTTAGTTTGTGTCATGAAAACTGTGTAGTATGTGAGAGGTTGAATACGCCCACAATGCTAGCCAATGGAGTTGGTGAAATTCTGGAAACTAGTGAAGTCAATGAGAATCTGAACTGTTGTTTAGATGATGGAATTGAACAACTAAATGACAGCCAAGATTTGGGCCCTTGCAAAATTTGTGGAAATGAAGTAGAAAGTGGTGATAATTTTAGAATATGCAGCCACCTGTTCTGCCCTCACAAATGTTATCACACCAGGTGCTTGACAAAGAAACAGTTAAAATCTTACGATACATGCTGGTACTGCCCTTCTTGTCTTTGCAGAGCATGCCTCATAAATCAAGATGATGACAAGATTGTTTTATGTGATGGCTGCGATCATGGATACCACATTTACTGTATGAGACCACCACTTGCTGAAATTCCAAAAGGAAAATGGTTTTGTAGCAAATGTGAAGCTGGAATCGAGGCAATACGTAGGGTGAAAAGGGCATATGAGAATTTTGAACACAAGCGTAGTAAGAGAGGGAAAGATACATTTGGGGGTTATGGCAATTCAGGCAAGAAACGGATCAATGGAGGCGATCAGGAATCGGATACAGGAAGGAGAGGAATGGACATGCTTCTTACTGCGGCCAAGACCCTAAATTATGAAGAGGGTCTGGCTAACCTTTGA

Protein sequence

MVIEDGESNGNCTGRPLEVKFMKSVAGKNGIGMGVLNVVTEGVPGTSDGFRTYKRRKQTKLAFGSECKGDGKVHVEAASQLVVQTVQETLYTLRGSNSCDHVHSPMVNLDECPEDLWRSVLLQQIYQSSSVNGGNVPMCVHDGLASHSGANDPSRFKIFDAQHGNSNIDLLRTGSVSSRVQMASHKENGVVSSGSLENSNRCSVSESCWRAFFSIIDSQKFISLCKLLSENFRGIKADNVFDFSLVNSRIKEGAYENSPMLFLSDIWRKFQAIGTELVSLAESLSDFSRAAYQEKVGVSGRNVFEDGKHEFSTRESPSHAKAEHMDGYGVYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPPVKEIPLKSWFCASCISSGFSLCHENCVVCERLNTPTMLANGVGEILETSEVNENLNCCLDDGIEQLNDSQDLGPCKICGNEVESGDNFRICSHLFCPHKCYHTRCLTKKQLKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWFCSKCEAGIEAIRRVKRAYENFEHKRSKRGKDTFGGYGNSGKKRINGGDQESDTGRRGMDMLLTAAKTLNYEEGLANL

Homology

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BLAST of Cp4.1LG02g00120 vs. ExPASy Swiss-Prot
Match: Q6ZJM9 (PHD finger protein EHD3 OS=Oryza sativa subsp. japonica OX=39947 GN=EHD3 PE=1 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 3.7e-58
Identity = 153/500 (30.60%), Postives = 232/500 (46.40%), Query Frame = 0


Query: 117 WRSVLLQQIYQSSSVNGGNVPMCVHDGLASHSGANDPSRFKIFDAQHGNSNIDLLRTGSV 176
           WR  L   +   +   GG +  C+      H+  ++P         H     +   +   
Sbjct: 57  WRDTLHGFLQSPAISQGGGIQTCIR-----HALQHNPCLLTNGVVVHTEFKGNPAHSQGE 116

Query: 177 SSRVQMASHKENGVVSS--GSLENSNRCSVSES----CWRAFFSIIDSQKFISLCKLLSE 236
            ++VQ  +    G V S   +++++   + SE+    C  A F I+ SQKF  LC LL  
Sbjct: 117 EAKVQHPNGAAGGKVVSADAAIQDAAAAASSEANKAMCNNALFDILVSQKFALLCHLLLG 176

Query: 237 NFRGIKADNVFDFSLVNSRIKEGAYENSPMLFLSDI---WRKFQAIGTELVSLAESLSDF 296
            F   K  +V D   ++++++ G Y ++P LF  DI   W KF+ +G E+  LA +LS  
Sbjct: 177 TFHVNKPGDVIDLEKIDAKMRNGDYAHNPALFDDDIQQMWEKFEQVGQEMTGLASNLSTI 236

Query: 297 SRAAYQEKV-GVSGRNVFEDGKHEFS--------TRES----------PSHAKAEHMDGY 356
           SR +YQ++  G S   V E    E S        T+ES           SH+        
Sbjct: 237 SRVSYQKQASGFSEAEVAEHRIEEISLPGAVHVVTKESTTTVQLAPCDSSHSTIPKRTVP 296

Query: 357 GVYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIK---PPVKEIPLKSWFCASC----- 416
               +C C  CG K +  + L+CD C+ +YH +C+K   P +K++P   W C++C     
Sbjct: 297 PGRDLCPCDGCGTKVDVEEGLICDECDTMYHFACVKLLNPDIKQVP-AIWHCSTCSFKKK 356

Query: 417 ---ISSGFSLCHE-----NCVVCERLNTPTMLANGVGEILETSEVNENLNCCLD-----D 476
                +  ++ H+     NCV+C++L           E+++T E +  L   ++     +
Sbjct: 357 ELAADTTNNVAHDCLHGGNCVLCDQL-----------ELVKTEEEDPKLPIKIELAEERE 416

Query: 477 GIEQLNDSQDLGP----------CKICGNEVESGDNFRICSHLFCPHKCYHTRCLTKKQL 536
           G    +  +D  P          CK CG   +    F +C H +C +K YH RCL   QL
Sbjct: 417 GSSVSSMGEDNEPDLSTTALSNLCKHCGTCEDDDKRFMVCGHPYCVYKFYHIRCLKTSQL 476

Query: 537 KSYDT----CWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWFCS 554
                    CWYCPSCLCR C  ++DDD+IV+CDGCD GYHIYCMRP    IPKGKW+C+
Sbjct: 477 AIEQQKKLGCWYCPSCLCRGCFQDKDDDQIVMCDGCDEGYHIYCMRPARNTIPKGKWYCT 534

[Close]

BLAST of Cp4.1LG02g00120 vs. ExPASy Swiss-Prot
Match: Q38JA7 (Lysine-specific demethylase 5C OS=Canis lupus familiaris OX=9615 GN=KDM5C PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.6e-13
Identity = 35/88 (39.77%), Postives = 51/88 (57.95%), Query Frame = 0


Query: 472 LTKKQLKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWF 531
           +T +  +++    +  S +CR C    +DDK++LCDGCD  YHI+C+ PPL EIPKG W 
Sbjct: 308 MTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWR 367

Query: 532 CSKCEAGIEAIRRVKRAYENFEHKRSKR 560
           C KC      +   KR  E F  +++ R
Sbjct: 368 CPKC-----VMAECKRPPEAFGFEQATR 390

[Close]

BLAST of Cp4.1LG02g00120 vs. ExPASy Swiss-Prot
Match: P41229 (Lysine-specific demethylase 5C OS=Homo sapiens OX=9606 GN=KDM5C PE=1 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 1.6e-13
Identity = 35/88 (39.77%), Postives = 51/88 (57.95%), Query Frame = 0


Query: 472 LTKKQLKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWF 531
           +T +  +++    +  S +CR C    +DDK++LCDGCD  YHI+C+ PPL EIPKG W 
Sbjct: 308 MTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWR 367

Query: 532 CSKCEAGIEAIRRVKRAYENFEHKRSKR 560
           C KC      +   KR  E F  +++ R
Sbjct: 368 CPKC-----VMAECKRPPEAFGFEQATR 390

[Close]

BLAST of Cp4.1LG02g00120 vs. ExPASy Swiss-Prot
Match: P41230 (Lysine-specific demethylase 5C OS=Mus musculus OX=10090 GN=Kdm5c PE=1 SV=4)

HSP 1 Score: 79.3 bits (194), Expect = 1.6e-13
Identity = 35/88 (39.77%), Postives = 51/88 (57.95%), Query Frame = 0


Query: 472 LTKKQLKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWF 531
           +T +  +++    +  S +CR C    +DDK++LCDGCD  YHI+C+ PPL EIPKG W 
Sbjct: 308 MTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWR 367

Query: 532 CSKCEAGIEAIRRVKRAYENFEHKRSKR 560
           C KC      +   KR  E F  +++ R
Sbjct: 368 CPKC-----VMAECKRPPEAFGFEQATR 390

[Close]

BLAST of Cp4.1LG02g00120 vs. ExPASy Swiss-Prot
Match: A1YVX4 (Lysine-specific demethylase 5C OS=Sus scrofa OX=9823 GN=KDM5C PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.6e-13
Identity = 35/88 (39.77%), Postives = 51/88 (57.95%), Query Frame = 0


Query: 472 LTKKQLKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWF 531
           +T +  +++    +  S +CR C    +DDK++LCDGCD  YHI+C+ PPL EIPKG W 
Sbjct: 267 MTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWR 326

Query: 532 CSKCEAGIEAIRRVKRAYENFEHKRSKR 560
           C KC      +   KR  E F  +++ R
Sbjct: 327 CPKC-----VMAECKRPPEAFGFEQATR 349

[Close]

BLAST of Cp4.1LG02g00120 vs. NCBI nr
Match: XP_023525092.1 (PHD finger protein EHD3-like [Cucurbita pepo subsp. pepo] >XP_023525093.1 PHD finger protein EHD3-like [Cucurbita pepo subsp. pepo] >XP_023525094.1 PHD finger protein EHD3-like [Cucurbita pepo subsp. pepo] >XP_023525095.1 PHD finger protein EHD3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1249 bits (3232), Expect = 0.0
Identity = 608/611 (99.51%), Postives = 608/611 (99.51%), Query Frame = 0


Query: 1   MVIEDGESNGNCTGRPLEVKFMKSVAGKNGIGMGVLNVVTEGVPGTSDGFRTYKRRKQTK 60
           MVIEDGESNGNCTGRPLEVKFMKSVAGKNGIGMGVLNVVTEGVPGTSDGFRTYKRRKQTK
Sbjct: 1   MVIEDGESNGNCTGRPLEVKFMKSVAGKNGIGMGVLNVVTEGVPGTSDGFRTYKRRKQTK 60

Query: 61  LAFGSECKGDGKVHVEAASQLVVQTVQETLYTLRGSNSCDHVHSPMVNLDECPEDLWRSV 120
           LAFGSECKGDGKVHVEAASQLVVQTVQETLYTLRGSNSCDHVHSPMVNLDECPEDLWRSV
Sbjct: 61  LAFGSECKGDGKVHVEAASQLVVQTVQETLYTLRGSNSCDHVHSPMVNLDECPEDLWRSV 120

Query: 121 LLQQIYQSSSVNGGNVPMCVHDGLASHSGANDPSRFKIFDAQHGNSNIDLLRTGSVSSRV 180
           LLQQIYQSSSVNGGNVPMCVHDGLASHSGANDPSRFKIFDAQHGNSNIDLLRTGSVSSRV
Sbjct: 121 LLQQIYQSSSVNGGNVPMCVHDGLASHSGANDPSRFKIFDAQHGNSNIDLLRTGSVSSRV 180

Query: 181 QMASHKENGVVSSGSLENSNRCSVSESCWRAFFSIIDSQKFISLCKLLSENFRGIKADNV 240
           QMASHKENGVVSSGSLENSNRCSVSESCWRAFFSIIDSQKFISLCKLLSENFRGIKADNV
Sbjct: 181 QMASHKENGVVSSGSLENSNRCSVSESCWRAFFSIIDSQKFISLCKLLSENFRGIKADNV 240

Query: 241 FDFSLVNSRIKEGAYENSPMLFLSD---IWRKFQAIGTELVSLAESLSDFSRAAYQEKVG 300
           FDFSLVNSRIKEGAYENSPMLFLSD   IWRKFQAIGTELVSLAESLSDFSRAAYQEKVG
Sbjct: 241 FDFSLVNSRIKEGAYENSPMLFLSDVQQIWRKFQAIGTELVSLAESLSDFSRAAYQEKVG 300

Query: 301 VSGRNVFEDGKHEFSTRESPSHAKAEHMDGYGVYKVCACRSCGEKAEGIDCLVCDSCEEI 360
           VSGRNVFEDGKHEFSTRESPSHAKAEHMDGYGVYKVCACRSCGEKAEGIDCLVCDSCEEI
Sbjct: 301 VSGRNVFEDGKHEFSTRESPSHAKAEHMDGYGVYKVCACRSCGEKAEGIDCLVCDSCEEI 360

Query: 361 YHISCIKPPVKEIPLKSWFCASCISSGFSLCHENCVVCERLNTPTMLANGVGEILETSEV 420
           YHISCIKPPVKEIPLKSWFCASCISSGFSLCHENCVVCERLNTPTMLANGVGEILETSEV
Sbjct: 361 YHISCIKPPVKEIPLKSWFCASCISSGFSLCHENCVVCERLNTPTMLANGVGEILETSEV 420

Query: 421 NENLNCCLDDGIEQLNDSQDLGPCKICGNEVESGDNFRICSHLFCPHKCYHTRCLTKKQL 480
           NENLNCCLDDGIEQLNDSQDLGPCKICGNEVESGDNFRICSHLFCPHKCYHTRCLTKKQL
Sbjct: 421 NENLNCCLDDGIEQLNDSQDLGPCKICGNEVESGDNFRICSHLFCPHKCYHTRCLTKKQL 480

Query: 481 KSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWFCSKCEA 540
           KSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWFCSKCEA
Sbjct: 481 KSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWFCSKCEA 540

Query: 541 GIEAIRRVKRAYENFEHKRSKRGKDTFGGYGNSGKKRINGGDQESDTGRRGMDMLLTAAK 600
           GIEAIRRVKRAYENFEHKRSKRGKDTFGGYGNSGKKRINGGDQESDTGRRGMDMLLTAAK
Sbjct: 541 GIEAIRRVKRAYENFEHKRSKRGKDTFGGYGNSGKKRINGGDQESDTGRRGMDMLLTAAK 600

Query: 601 TLNYEEGLANL 608
           TLNYEEGLANL
Sbjct: 601 TLNYEEGLANL 611

[Close]

BLAST of Cp4.1LG02g00120 vs. NCBI nr
Match: XP_022926263.1 (PHD finger protein EHD3-like [Cucurbita moschata] >XP_022926264.1 PHD finger protein EHD3-like [Cucurbita moschata] >XP_022926266.1 PHD finger protein EHD3-like [Cucurbita moschata] >XP_022926267.1 PHD finger protein EHD3-like [Cucurbita moschata])

HSP 1 Score: 1228 bits (3177), Expect = 0.0
Identity = 601/614 (97.88%), Postives = 604/614 (98.37%), Query Frame = 0


Query: 1   MVIEDGESNGNCTGRPLEVKFMKSVAGKNGIGMGVLNVVTEGVPGTSDGFRTYKRRKQTK 60
           MVIEDGESNGNCTGRPLEVKFMKSVAGKNGIGMGVLNVVTEGVPGTSDGFRTYKRRKQTK
Sbjct: 1   MVIEDGESNGNCTGRPLEVKFMKSVAGKNGIGMGVLNVVTEGVPGTSDGFRTYKRRKQTK 60

Query: 61  LAFGSECKGDGKVHVEAASQLVVQTVQETLYTLRGSNSCDHVHSPMVNLDECPEDLWRSV 120
           LA GSECKGDGKVHVEAASQLVVQTVQETLYTLRGSNS DHVHSPMVNLDECPEDLWRSV
Sbjct: 61  LALGSECKGDGKVHVEAASQLVVQTVQETLYTLRGSNSYDHVHSPMVNLDECPEDLWRSV 120

Query: 121 LLQQIYQSSSVNGGN---VPMCVHDGLASHSGANDPSRFKIFDAQHGNSNIDLLRTGSVS 180
           LLQQIYQSSSVNGGN   +PMCVHDGLASHSGA DPSRFKIFDAQHGNSNIDLLRTGSVS
Sbjct: 121 LLQQIYQSSSVNGGNGGNIPMCVHDGLASHSGAIDPSRFKIFDAQHGNSNIDLLRTGSVS 180

Query: 181 SRVQMASHKENGVVSSGSLENSNRCSVSESCWRAFFSIIDSQKFISLCKLLSENFRGIKA 240
           SRVQMASHKENGVVSSGSLENSNRCSVSESCWRAFFSIIDSQKFISLCKLLSENFRGIKA
Sbjct: 181 SRVQMASHKENGVVSSGSLENSNRCSVSESCWRAFFSIIDSQKFISLCKLLSENFRGIKA 240

Query: 241 DNVFDFSLVNSRIKEGAYENSPMLFLSD---IWRKFQAIGTELVSLAESLSDFSRAAYQE 300
           DNVFDFSLVNSRIKEGAYENSPMLFLSD   IWRKFQAIGTELVSLAESLSDFSRAAYQE
Sbjct: 241 DNVFDFSLVNSRIKEGAYENSPMLFLSDVQQIWRKFQAIGTELVSLAESLSDFSRAAYQE 300

Query: 301 KVGVSGRNVFEDGKHEFSTRESPSHAKAEHMDGYGVYKVCACRSCGEKAEGIDCLVCDSC 360
           KVGVSGRNVFEDGKHEFSTRESPSHAKAEHMDGYGVYKVCACRSCGEKAEGIDCLVCDSC
Sbjct: 301 KVGVSGRNVFEDGKHEFSTRESPSHAKAEHMDGYGVYKVCACRSCGEKAEGIDCLVCDSC 360

Query: 361 EEIYHISCIKPPVKEIPLKSWFCASCISSGFSLCHENCVVCERLNTPTMLANGVGEILET 420
           EEIYHISCIKPPVKEIPLKSWFCASCISSGFSLCH+NCVVCERLNTPTMLANGVGEILET
Sbjct: 361 EEIYHISCIKPPVKEIPLKSWFCASCISSGFSLCHDNCVVCERLNTPTMLANGVGEILET 420

Query: 421 SEVNENLNCCLDDGIEQLNDSQDLGPCKICGNEVESGDNFRICSHLFCPHKCYHTRCLTK 480
           SEVNENLNCCLDDGIEQLNDS+DLGPCKICGN VESGDNFRICSHLFCPHKCYHTRCLTK
Sbjct: 421 SEVNENLNCCLDDGIEQLNDSKDLGPCKICGNGVESGDNFRICSHLFCPHKCYHTRCLTK 480

Query: 481 KQLKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWFCSK 540
           KQLKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWFCSK
Sbjct: 481 KQLKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWFCSK 540

Query: 541 CEAGIEAIRRVKRAYENFEHKRSKRGKDTFGGYGNSGKKRINGGDQESDTGRRGMDMLLT 600
           CEAGIEAIRRVKRAYENFEHKRSKRGKDTFGGYGNSGKKRINGGDQESDTGRRGMDMLLT
Sbjct: 541 CEAGIEAIRRVKRAYENFEHKRSKRGKDTFGGYGNSGKKRINGGDQESDTGRRGMDMLLT 600

Query: 601 AAKTLNYEEGLANL 608
           AAKTLNYEEGLANL
Sbjct: 601 AAKTLNYEEGLANL 614

[Close]

BLAST of Cp4.1LG02g00120 vs. NCBI nr
Match: XP_022981421.1 (PHD finger protein EHD3-like [Cucurbita maxima] >XP_022981422.1 PHD finger protein EHD3-like [Cucurbita maxima] >XP_022981423.1 PHD finger protein EHD3-like [Cucurbita maxima] >XP_022981425.1 PHD finger protein EHD3-like [Cucurbita maxima])

HSP 1 Score: 1211 bits (3134), Expect = 0.0
Identity = 596/612 (97.39%), Postives = 599/612 (97.88%), Query Frame = 0


Query: 1   MVIEDGESNGNCTGRPLEVKFMKSVAGKNGIGMGVLNVVTEG-VPGTSDGFRTYKRRKQT 60
           MVIEDGESNGNCTGRPLEVKFMKSVAGKNGIGMGVLNVVTEG VPGTSDGFRTYKRRKQT
Sbjct: 1   MVIEDGESNGNCTGRPLEVKFMKSVAGKNGIGMGVLNVVTEGGVPGTSDGFRTYKRRKQT 60

Query: 61  KLAFGSECKGDGKVHVEAASQLVVQTVQETLYTLRGSNSCDHVHSPMVNLDECPEDLWRS 120
           KLAFGSEC GDGKVHVEAASQLV QTVQETLYTLRGSNSCDHVHSPMVNLDECPEDLWRS
Sbjct: 61  KLAFGSECMGDGKVHVEAASQLVFQTVQETLYTLRGSNSCDHVHSPMVNLDECPEDLWRS 120

Query: 121 VLLQQIYQSSSVNGGNVPMCVHDGLASHSGANDPSRFKIFDAQHGNSNIDLLRTGSVSSR 180
           VLLQQIYQSSSVNGGNV    HDGLASHSGA DPSRFKIFDAQHGNSNIDLLRTGSVSSR
Sbjct: 121 VLLQQIYQSSSVNGGNV----HDGLASHSGAIDPSRFKIFDAQHGNSNIDLLRTGSVSSR 180

Query: 181 VQMASHKENGVVSSGSLENSNRCSVSESCWRAFFSIIDSQKFISLCKLLSENFRGIKADN 240
           VQMASHKENGVVSSGSLENSNRCSVSESCWRAFFSIIDSQKFISLCKLLSENFRGIKADN
Sbjct: 181 VQMASHKENGVVSSGSLENSNRCSVSESCWRAFFSIIDSQKFISLCKLLSENFRGIKADN 240

Query: 241 VFDFSLVNSRIKEGAYENSPMLFLSD---IWRKFQAIGTELVSLAESLSDFSRAAYQEKV 300
           VFDFSLVNSRIKEGAY NSPMLFLSD   IWRKFQAIGTELVSLAESLSDFSRAAYQEKV
Sbjct: 241 VFDFSLVNSRIKEGAYGNSPMLFLSDVQQIWRKFQAIGTELVSLAESLSDFSRAAYQEKV 300

Query: 301 GVSGRNVFEDGKHEFSTRESPSHAKAEHMDGYGVYKVCACRSCGEKAEGIDCLVCDSCEE 360
           GVSGRNVFEDGKHEFSTRESPSHAKAEHMDGYGVYKVCACRSCGEKAEGIDCLVCDSCEE
Sbjct: 301 GVSGRNVFEDGKHEFSTRESPSHAKAEHMDGYGVYKVCACRSCGEKAEGIDCLVCDSCEE 360

Query: 361 IYHISCIKPPVKEIPLKSWFCASCISSGFSLCHENCVVCERLNTPTMLANGVGEILETSE 420
           IYHISCIKPPVKEIPLKSWFCASCISSGFSLCH+NCVVCERLNTPTMLANGVGEILETSE
Sbjct: 361 IYHISCIKPPVKEIPLKSWFCASCISSGFSLCHDNCVVCERLNTPTMLANGVGEILETSE 420

Query: 421 VNENLNCCLDDGIEQLNDSQDLGPCKICGNEVESGDNFRICSHLFCPHKCYHTRCLTKKQ 480
           VNENLNCCLDDGIEQLNDS+DLGPCKICGN VESGDNFRICSHLFCPHKCYHTRCLTKKQ
Sbjct: 421 VNENLNCCLDDGIEQLNDSKDLGPCKICGNGVESGDNFRICSHLFCPHKCYHTRCLTKKQ 480

Query: 481 LKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWFCSKCE 540
           LKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWFCSKCE
Sbjct: 481 LKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWFCSKCE 540

Query: 541 AGIEAIRRVKRAYENFEHKRSKRGKDTFGGYGNSGKKRINGGDQESDTGRRGMDMLLTAA 600
           AGIEAIRRVKRAYENFEHKRSKRGK+TFGGYGNSGKKRINGGDQESDTGRRGMDMLLTAA
Sbjct: 541 AGIEAIRRVKRAYENFEHKRSKRGKNTFGGYGNSGKKRINGGDQESDTGRRGMDMLLTAA 600

Query: 601 KTLNYEEGLANL 608
           KTLNYEEGLANL
Sbjct: 601 KTLNYEEGLANL 608

[Close]

BLAST of Cp4.1LG02g00120 vs. NCBI nr
Match: KAG6607698.1 (PHD finger protein EHD3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1165 bits (3014), Expect = 0.0
Identity = 578/614 (94.14%), Postives = 582/614 (94.79%), Query Frame = 0


Query: 1   MVIEDGESNGNCTGRPLEVKFMKSVAGKNGIGMGVLNVVTEGVPGTSDGFRTYKRRKQTK 60
           MVIEDGESNGNCTGRPLEVKFMKSVAGKNGIGMGVLNVVTEGVPGTSDGFRTYKRRKQTK
Sbjct: 1   MVIEDGESNGNCTGRPLEVKFMKSVAGKNGIGMGVLNVVTEGVPGTSDGFRTYKRRKQTK 60

Query: 61  LAFGSECKGDGKVHVEAASQLVVQTVQETLYTLRGSNSCDHVHSPMVNLDECPEDLWRSV 120
           LA GSECKGDGKVHVEAASQLVVQTVQETLYTLRGSNSCDHVHSPMVNLDECPEDLWRSV
Sbjct: 61  LALGSECKGDGKVHVEAASQLVVQTVQETLYTLRGSNSCDHVHSPMVNLDECPEDLWRSV 120

Query: 121 LLQQIYQSSSVNGGN---VPMCVHDGLASHSGANDPSRFKIFDAQHGNSNIDLLRTGSVS 180
           LLQQIYQSSSVNGGN   VPMCVHDGLASHSGA DPSRFKIFDAQHGNSNIDLLRTGS+ 
Sbjct: 121 LLQQIYQSSSVNGGNGGNVPMCVHDGLASHSGAIDPSRFKIFDAQHGNSNIDLLRTGSMY 180

Query: 181 SRVQMASHKENGVVSSGSLENSNRCSVSESCWRAFFSIIDSQKFISLCKLLSENFRGIKA 240
           SRVQMASHKENGVVSSGSLENSNRCSVSESCWRAFFSIIDSQKFISLCKLLSENFRGIKA
Sbjct: 181 SRVQMASHKENGVVSSGSLENSNRCSVSESCWRAFFSIIDSQKFISLCKLLSENFRGIKA 240

Query: 241 DNVFDFSLVNSRIKEGAYENSPMLFLSD---IWRKFQAIGTELVSLAESLSDFSRAAYQE 300
           DNVFDFSLVNSRIKEGAYENSPMLFLSD   IWRKFQAIGTELVSLAESLSDFSRAAYQE
Sbjct: 241 DNVFDFSLVNSRIKEGAYENSPMLFLSDVQQIWRKFQAIGTELVSLAESLSDFSRAAYQE 300

Query: 301 KVGVSGRNVFEDGKHEFSTRESPSHAKAEHMDGYGVYKVCACRSCGEKAEGIDCLVCDSC 360
           KVGVSGRNVFEDGKHEFSTRESPSHAKAEHMDGYGVYKVCACRSCGEKAEGIDCLVCDSC
Sbjct: 301 KVGVSGRNVFEDGKHEFSTRESPSHAKAEHMDGYGVYKVCACRSCGEKAEGIDCLVCDSC 360

Query: 361 EEIYHISCIKPPVKEIPLKSWFCASCISSGFSLCHENCVVCERLNTPTMLANGVGEILET 420
           EEIYHISCIKPPVKEIPLKSWFCASCISSGFSLCH+NCVVCERLNTPTMLANGVGEI+ET
Sbjct: 361 EEIYHISCIKPPVKEIPLKSWFCASCISSGFSLCHDNCVVCERLNTPTMLANGVGEIMET 420

Query: 421 SEVNENLNCCLDDGIEQLNDSQDLGPCKICGNEVESGDNFRICSHLFCPHKCYHTRCLTK 480
           SEVNENLNCCLDDGIEQLNDS+DLGPCKICGN VESGDNFRICSHLFCPHKCYHT     
Sbjct: 421 SEVNENLNCCLDDGIEQLNDSKDLGPCKICGNGVESGDNFRICSHLFCPHKCYHT----- 480

Query: 481 KQLKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWFCSK 540
                            RACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWFCSK
Sbjct: 481 -----------------RACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWFCSK 540

Query: 541 CEAGIEAIRRVKRAYENFEHKRSKRGKDTFGGYGNSGKKRINGGDQESDTGRRGMDMLLT 600
           CEAGIEAIRRVKRAYENFEHKRSKRGKDTFGGYGNSGKKRINGGDQESDTGRRGMDMLLT
Sbjct: 541 CEAGIEAIRRVKRAYENFEHKRSKRGKDTFGGYGNSGKKRINGGDQESDTGRRGMDMLLT 592

Query: 601 AAKTLNYEEGLANL 608
           AAKTLNYEEGLANL
Sbjct: 601 AAKTLNYEEGLANL 592

[Close]

BLAST of Cp4.1LG02g00120 vs. NCBI nr
Match: XP_022975583.1 (PHD finger protein EHD3-like [Cucurbita maxima] >XP_022975586.1 PHD finger protein EHD3-like [Cucurbita maxima] >XP_022975591.1 PHD finger protein EHD3-like [Cucurbita maxima])

HSP 1 Score: 1053 bits (2724), Expect = 0.0
Identity = 519/616 (84.25%), Postives = 554/616 (89.94%), Query Frame = 0


Query: 1   MVIEDGESNGNCTGRPLEVKFMKSVAGKNGIGMGVLNVVTEGVPGTSDGFRTYKRRKQTK 60
           M+IE+ +SNG+ TGR LEVKF+KS AG+NGIGMG+LNVVTEGVPGTSDGFRTYKRRKQTK
Sbjct: 1   MIIENRKSNGDFTGRALEVKFVKSEAGENGIGMGILNVVTEGVPGTSDGFRTYKRRKQTK 60

Query: 61  LAFGSECKGDGKVHVEAASQLVVQTVQETLYTLRGSNSCDHVHSPMVNLDECPEDLWRSV 120
           L  GSECKG+GK HVEA+ Q V  TV+ETL+ LRGSNSCDHVH PMVNLDE P+DLWRSV
Sbjct: 61  LTCGSECKGNGKTHVEASGQFV--TVEETLHLLRGSNSCDHVHPPMVNLDESPDDLWRSV 120

Query: 121 LLQQIYQSSSVNGGNVPMCVHDGLASHSGANDPSRFKIFDAQHGNSNIDLLRTGSVSSRV 180
           L++Q+   SSVNG NVPMCVHDGLA++SGANDPSRF+ FDAQ  NSN DL RTGSVSS V
Sbjct: 121 LVKQMCHLSSVNGDNVPMCVHDGLATNSGANDPSRFRKFDAQDANSNNDLARTGSVSSTV 180

Query: 181 QMASHKENGVVSSGSLENSNRCSVSESCWRAFFSIIDSQKFISLCKLLSENFRGIKADNV 240
           QMASH+ENGVVS+GSLEN +RCSV+ESCWRAF SIIDSQKFISLCKLLSENFRGIKADNV
Sbjct: 181 QMASHRENGVVSNGSLENPDRCSVNESCWRAFLSIIDSQKFISLCKLLSENFRGIKADNV 240

Query: 241 FDFSLVNSRIKEGAYENSPMLFLSD---IWRKFQAIGTELVSLAESLSDFSRAAYQEKVG 300
           FDFSLVNSRIKEGAYENSP LFLSD   IWRKFQAIGTELVSLAESLSDFSR  Y+EKVG
Sbjct: 241 FDFSLVNSRIKEGAYENSPTLFLSDVQQIWRKFQAIGTELVSLAESLSDFSRTTYREKVG 300

Query: 301 VSGRNVFEDGKHEFSTRESPSHAKAEHMDGYGVYKVCACRSCGEKAEGIDCLVCDSCEEI 360
           VSGRNVFEDGKHE ST ESPSHAKAEHMDGYG YKVCACRSCGEKAEGI+CLVCDSCEEI
Sbjct: 301 VSGRNVFEDGKHESSTWESPSHAKAEHMDGYGAYKVCACRSCGEKAEGINCLVCDSCEEI 360

Query: 361 YHISCIKPPVKEIPLKSWFCASCISSGFSLCHENCVVCERLNTPTMLANGVGEILETSEV 420
           YHISCIKPPVKEIPLKSW+CASC  SGFSL H+NCVVCERLNTPTMLANGVGEILETSE 
Sbjct: 361 YHISCIKPPVKEIPLKSWYCASCTGSGFSLRHDNCVVCERLNTPTMLANGVGEILETSEH 420

Query: 421 N-----ENLNCCLDDGIEQLNDSQDLGPCKICGNEVESGDNFRICSHLFCPHKCYHTRCL 480
           N     +N N C DDG EQL DSQDLGPCKICGN VE GD +R+CSHLFCPH+ YHTRCL
Sbjct: 421 NHFHGDDNPNYCTDDGFEQLKDSQDLGPCKICGNGVEGGDKYRMCSHLFCPHQFYHTRCL 480

Query: 481 TKKQLKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWFC 540
           TK QLKSYDTCWYCPSCLCRACL+NQDDDKIVLCDGCDHGYHIYCMRPPLA IPKG+WFC
Sbjct: 481 TKNQLKSYDTCWYCPSCLCRACLVNQDDDKIVLCDGCDHGYHIYCMRPPLAAIPKGQWFC 540

Query: 541 SKCEAGIEAIRRVKRAYENFEHKRSKRGKDTFGGYGNSGKKRINGGDQESDTGRRGMDML 600
           SKCEAGI+AIRRVK AYENFE+KRSKRGKDTFG    SGKKRINGGD+ESDTGR GMDML
Sbjct: 541 SKCEAGIQAIRRVKMAYENFENKRSKRGKDTFG---KSGKKRINGGDEESDTGRGGMDML 600

Query: 601 LTAAKTLNYEEGLANL 608
           LTAAKTLNYEEGL NL
Sbjct: 601 LTAAKTLNYEEGLTNL 611

[Close]

BLAST of Cp4.1LG02g00120 vs. ExPASy TrEMBL
Match: A0A6J1EE29 (PHD finger protein EHD3-like OS=Cucurbita moschata OX=3662 GN=LOC111433442 PE=4 SV=1)

HSP 1 Score: 1228 bits (3177), Expect = 0.0
Identity = 601/614 (97.88%), Postives = 604/614 (98.37%), Query Frame = 0


Query: 1   MVIEDGESNGNCTGRPLEVKFMKSVAGKNGIGMGVLNVVTEGVPGTSDGFRTYKRRKQTK 60
           MVIEDGESNGNCTGRPLEVKFMKSVAGKNGIGMGVLNVVTEGVPGTSDGFRTYKRRKQTK
Sbjct: 1   MVIEDGESNGNCTGRPLEVKFMKSVAGKNGIGMGVLNVVTEGVPGTSDGFRTYKRRKQTK 60

Query: 61  LAFGSECKGDGKVHVEAASQLVVQTVQETLYTLRGSNSCDHVHSPMVNLDECPEDLWRSV 120
           LA GSECKGDGKVHVEAASQLVVQTVQETLYTLRGSNS DHVHSPMVNLDECPEDLWRSV
Sbjct: 61  LALGSECKGDGKVHVEAASQLVVQTVQETLYTLRGSNSYDHVHSPMVNLDECPEDLWRSV 120

Query: 121 LLQQIYQSSSVNGGN---VPMCVHDGLASHSGANDPSRFKIFDAQHGNSNIDLLRTGSVS 180
           LLQQIYQSSSVNGGN   +PMCVHDGLASHSGA DPSRFKIFDAQHGNSNIDLLRTGSVS
Sbjct: 121 LLQQIYQSSSVNGGNGGNIPMCVHDGLASHSGAIDPSRFKIFDAQHGNSNIDLLRTGSVS 180

Query: 181 SRVQMASHKENGVVSSGSLENSNRCSVSESCWRAFFSIIDSQKFISLCKLLSENFRGIKA 240
           SRVQMASHKENGVVSSGSLENSNRCSVSESCWRAFFSIIDSQKFISLCKLLSENFRGIKA
Sbjct: 181 SRVQMASHKENGVVSSGSLENSNRCSVSESCWRAFFSIIDSQKFISLCKLLSENFRGIKA 240

Query: 241 DNVFDFSLVNSRIKEGAYENSPMLFLSD---IWRKFQAIGTELVSLAESLSDFSRAAYQE 300
           DNVFDFSLVNSRIKEGAYENSPMLFLSD   IWRKFQAIGTELVSLAESLSDFSRAAYQE
Sbjct: 241 DNVFDFSLVNSRIKEGAYENSPMLFLSDVQQIWRKFQAIGTELVSLAESLSDFSRAAYQE 300

Query: 301 KVGVSGRNVFEDGKHEFSTRESPSHAKAEHMDGYGVYKVCACRSCGEKAEGIDCLVCDSC 360
           KVGVSGRNVFEDGKHEFSTRESPSHAKAEHMDGYGVYKVCACRSCGEKAEGIDCLVCDSC
Sbjct: 301 KVGVSGRNVFEDGKHEFSTRESPSHAKAEHMDGYGVYKVCACRSCGEKAEGIDCLVCDSC 360

Query: 361 EEIYHISCIKPPVKEIPLKSWFCASCISSGFSLCHENCVVCERLNTPTMLANGVGEILET 420
           EEIYHISCIKPPVKEIPLKSWFCASCISSGFSLCH+NCVVCERLNTPTMLANGVGEILET
Sbjct: 361 EEIYHISCIKPPVKEIPLKSWFCASCISSGFSLCHDNCVVCERLNTPTMLANGVGEILET 420

Query: 421 SEVNENLNCCLDDGIEQLNDSQDLGPCKICGNEVESGDNFRICSHLFCPHKCYHTRCLTK 480
           SEVNENLNCCLDDGIEQLNDS+DLGPCKICGN VESGDNFRICSHLFCPHKCYHTRCLTK
Sbjct: 421 SEVNENLNCCLDDGIEQLNDSKDLGPCKICGNGVESGDNFRICSHLFCPHKCYHTRCLTK 480

Query: 481 KQLKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWFCSK 540
           KQLKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWFCSK
Sbjct: 481 KQLKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWFCSK 540

Query: 541 CEAGIEAIRRVKRAYENFEHKRSKRGKDTFGGYGNSGKKRINGGDQESDTGRRGMDMLLT 600
           CEAGIEAIRRVKRAYENFEHKRSKRGKDTFGGYGNSGKKRINGGDQESDTGRRGMDMLLT
Sbjct: 541 CEAGIEAIRRVKRAYENFEHKRSKRGKDTFGGYGNSGKKRINGGDQESDTGRRGMDMLLT 600

Query: 601 AAKTLNYEEGLANL 608
           AAKTLNYEEGLANL
Sbjct: 601 AAKTLNYEEGLANL 614

[Close]

BLAST of Cp4.1LG02g00120 vs. ExPASy TrEMBL
Match: A0A6J1IZG8 (PHD finger protein EHD3-like OS=Cucurbita maxima OX=3661 GN=LOC111480549 PE=4 SV=1)

HSP 1 Score: 1211 bits (3134), Expect = 0.0
Identity = 596/612 (97.39%), Postives = 599/612 (97.88%), Query Frame = 0


Query: 1   MVIEDGESNGNCTGRPLEVKFMKSVAGKNGIGMGVLNVVTEG-VPGTSDGFRTYKRRKQT 60
           MVIEDGESNGNCTGRPLEVKFMKSVAGKNGIGMGVLNVVTEG VPGTSDGFRTYKRRKQT
Sbjct: 1   MVIEDGESNGNCTGRPLEVKFMKSVAGKNGIGMGVLNVVTEGGVPGTSDGFRTYKRRKQT 60

Query: 61  KLAFGSECKGDGKVHVEAASQLVVQTVQETLYTLRGSNSCDHVHSPMVNLDECPEDLWRS 120
           KLAFGSEC GDGKVHVEAASQLV QTVQETLYTLRGSNSCDHVHSPMVNLDECPEDLWRS
Sbjct: 61  KLAFGSECMGDGKVHVEAASQLVFQTVQETLYTLRGSNSCDHVHSPMVNLDECPEDLWRS 120

Query: 121 VLLQQIYQSSSVNGGNVPMCVHDGLASHSGANDPSRFKIFDAQHGNSNIDLLRTGSVSSR 180
           VLLQQIYQSSSVNGGNV    HDGLASHSGA DPSRFKIFDAQHGNSNIDLLRTGSVSSR
Sbjct: 121 VLLQQIYQSSSVNGGNV----HDGLASHSGAIDPSRFKIFDAQHGNSNIDLLRTGSVSSR 180

Query: 181 VQMASHKENGVVSSGSLENSNRCSVSESCWRAFFSIIDSQKFISLCKLLSENFRGIKADN 240
           VQMASHKENGVVSSGSLENSNRCSVSESCWRAFFSIIDSQKFISLCKLLSENFRGIKADN
Sbjct: 181 VQMASHKENGVVSSGSLENSNRCSVSESCWRAFFSIIDSQKFISLCKLLSENFRGIKADN 240

Query: 241 VFDFSLVNSRIKEGAYENSPMLFLSD---IWRKFQAIGTELVSLAESLSDFSRAAYQEKV 300
           VFDFSLVNSRIKEGAY NSPMLFLSD   IWRKFQAIGTELVSLAESLSDFSRAAYQEKV
Sbjct: 241 VFDFSLVNSRIKEGAYGNSPMLFLSDVQQIWRKFQAIGTELVSLAESLSDFSRAAYQEKV 300

Query: 301 GVSGRNVFEDGKHEFSTRESPSHAKAEHMDGYGVYKVCACRSCGEKAEGIDCLVCDSCEE 360
           GVSGRNVFEDGKHEFSTRESPSHAKAEHMDGYGVYKVCACRSCGEKAEGIDCLVCDSCEE
Sbjct: 301 GVSGRNVFEDGKHEFSTRESPSHAKAEHMDGYGVYKVCACRSCGEKAEGIDCLVCDSCEE 360

Query: 361 IYHISCIKPPVKEIPLKSWFCASCISSGFSLCHENCVVCERLNTPTMLANGVGEILETSE 420
           IYHISCIKPPVKEIPLKSWFCASCISSGFSLCH+NCVVCERLNTPTMLANGVGEILETSE
Sbjct: 361 IYHISCIKPPVKEIPLKSWFCASCISSGFSLCHDNCVVCERLNTPTMLANGVGEILETSE 420

Query: 421 VNENLNCCLDDGIEQLNDSQDLGPCKICGNEVESGDNFRICSHLFCPHKCYHTRCLTKKQ 480
           VNENLNCCLDDGIEQLNDS+DLGPCKICGN VESGDNFRICSHLFCPHKCYHTRCLTKKQ
Sbjct: 421 VNENLNCCLDDGIEQLNDSKDLGPCKICGNGVESGDNFRICSHLFCPHKCYHTRCLTKKQ 480

Query: 481 LKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWFCSKCE 540
           LKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWFCSKCE
Sbjct: 481 LKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWFCSKCE 540

Query: 541 AGIEAIRRVKRAYENFEHKRSKRGKDTFGGYGNSGKKRINGGDQESDTGRRGMDMLLTAA 600
           AGIEAIRRVKRAYENFEHKRSKRGK+TFGGYGNSGKKRINGGDQESDTGRRGMDMLLTAA
Sbjct: 541 AGIEAIRRVKRAYENFEHKRSKRGKNTFGGYGNSGKKRINGGDQESDTGRRGMDMLLTAA 600

Query: 601 KTLNYEEGLANL 608
           KTLNYEEGLANL
Sbjct: 601 KTLNYEEGLANL 608

[Close]

BLAST of Cp4.1LG02g00120 vs. ExPASy TrEMBL
Match: A0A6J1IEM0 (PHD finger protein EHD3-like OS=Cucurbita maxima OX=3661 GN=LOC111475137 PE=4 SV=1)

HSP 1 Score: 1053 bits (2724), Expect = 0.0
Identity = 519/616 (84.25%), Postives = 554/616 (89.94%), Query Frame = 0


Query: 1   MVIEDGESNGNCTGRPLEVKFMKSVAGKNGIGMGVLNVVTEGVPGTSDGFRTYKRRKQTK 60
           M+IE+ +SNG+ TGR LEVKF+KS AG+NGIGMG+LNVVTEGVPGTSDGFRTYKRRKQTK
Sbjct: 1   MIIENRKSNGDFTGRALEVKFVKSEAGENGIGMGILNVVTEGVPGTSDGFRTYKRRKQTK 60

Query: 61  LAFGSECKGDGKVHVEAASQLVVQTVQETLYTLRGSNSCDHVHSPMVNLDECPEDLWRSV 120
           L  GSECKG+GK HVEA+ Q V  TV+ETL+ LRGSNSCDHVH PMVNLDE P+DLWRSV
Sbjct: 61  LTCGSECKGNGKTHVEASGQFV--TVEETLHLLRGSNSCDHVHPPMVNLDESPDDLWRSV 120

Query: 121 LLQQIYQSSSVNGGNVPMCVHDGLASHSGANDPSRFKIFDAQHGNSNIDLLRTGSVSSRV 180
           L++Q+   SSVNG NVPMCVHDGLA++SGANDPSRF+ FDAQ  NSN DL RTGSVSS V
Sbjct: 121 LVKQMCHLSSVNGDNVPMCVHDGLATNSGANDPSRFRKFDAQDANSNNDLARTGSVSSTV 180

Query: 181 QMASHKENGVVSSGSLENSNRCSVSESCWRAFFSIIDSQKFISLCKLLSENFRGIKADNV 240
           QMASH+ENGVVS+GSLEN +RCSV+ESCWRAF SIIDSQKFISLCKLLSENFRGIKADNV
Sbjct: 181 QMASHRENGVVSNGSLENPDRCSVNESCWRAFLSIIDSQKFISLCKLLSENFRGIKADNV 240

Query: 241 FDFSLVNSRIKEGAYENSPMLFLSD---IWRKFQAIGTELVSLAESLSDFSRAAYQEKVG 300
           FDFSLVNSRIKEGAYENSP LFLSD   IWRKFQAIGTELVSLAESLSDFSR  Y+EKVG
Sbjct: 241 FDFSLVNSRIKEGAYENSPTLFLSDVQQIWRKFQAIGTELVSLAESLSDFSRTTYREKVG 300

Query: 301 VSGRNVFEDGKHEFSTRESPSHAKAEHMDGYGVYKVCACRSCGEKAEGIDCLVCDSCEEI 360
           VSGRNVFEDGKHE ST ESPSHAKAEHMDGYG YKVCACRSCGEKAEGI+CLVCDSCEEI
Sbjct: 301 VSGRNVFEDGKHESSTWESPSHAKAEHMDGYGAYKVCACRSCGEKAEGINCLVCDSCEEI 360

Query: 361 YHISCIKPPVKEIPLKSWFCASCISSGFSLCHENCVVCERLNTPTMLANGVGEILETSEV 420
           YHISCIKPPVKEIPLKSW+CASC  SGFSL H+NCVVCERLNTPTMLANGVGEILETSE 
Sbjct: 361 YHISCIKPPVKEIPLKSWYCASCTGSGFSLRHDNCVVCERLNTPTMLANGVGEILETSEH 420

Query: 421 N-----ENLNCCLDDGIEQLNDSQDLGPCKICGNEVESGDNFRICSHLFCPHKCYHTRCL 480
           N     +N N C DDG EQL DSQDLGPCKICGN VE GD +R+CSHLFCPH+ YHTRCL
Sbjct: 421 NHFHGDDNPNYCTDDGFEQLKDSQDLGPCKICGNGVEGGDKYRMCSHLFCPHQFYHTRCL 480

Query: 481 TKKQLKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWFC 540
           TK QLKSYDTCWYCPSCLCRACL+NQDDDKIVLCDGCDHGYHIYCMRPPLA IPKG+WFC
Sbjct: 481 TKNQLKSYDTCWYCPSCLCRACLVNQDDDKIVLCDGCDHGYHIYCMRPPLAAIPKGQWFC 540

Query: 541 SKCEAGIEAIRRVKRAYENFEHKRSKRGKDTFGGYGNSGKKRINGGDQESDTGRRGMDML 600
           SKCEAGI+AIRRVK AYENFE+KRSKRGKDTFG    SGKKRINGGD+ESDTGR GMDML
Sbjct: 541 SKCEAGIQAIRRVKMAYENFENKRSKRGKDTFG---KSGKKRINGGDEESDTGRGGMDML 600

Query: 601 LTAAKTLNYEEGLANL 608
           LTAAKTLNYEEGL NL
Sbjct: 601 LTAAKTLNYEEGLTNL 611

[Close]

BLAST of Cp4.1LG02g00120 vs. ExPASy TrEMBL
Match: A0A6J1F863 (PHD finger protein EHD3-like OS=Cucurbita moschata OX=3662 GN=LOC111442986 PE=4 SV=1)

HSP 1 Score: 1046 bits (2706), Expect = 0.0
Identity = 517/616 (83.93%), Postives = 551/616 (89.45%), Query Frame = 0


Query: 1   MVIEDGESNGNCTGRPLEVKFMKSVAGKNGIGMGVLNVVTEGVPGTSDGFRTYKRRKQTK 60
           M+IE+ +SNG+ TGR LEVKF+KS AG+NGIGMG+LNVVTEGVPGTSDGFRTYKRRKQTK
Sbjct: 1   MIIENRKSNGDFTGRALEVKFVKSEAGENGIGMGILNVVTEGVPGTSDGFRTYKRRKQTK 60

Query: 61  LAFGSECKGDGKVHVEAASQLVVQTVQETLYTLRGSNSCDHVHSPMVNLDECPEDLWRSV 120
           L  GSECKG+GK HVEA+ Q V  TV+ETL+ LRGSNSCDHVH PMVNLDE P+DLWRSV
Sbjct: 61  LTCGSECKGNGKTHVEASGQFV--TVEETLHLLRGSNSCDHVHPPMVNLDESPDDLWRSV 120

Query: 121 LLQQIYQSSSVNGGNVPMCVHDGLASHSGANDPSRFKIFDAQHGNSNIDLLRTGSVSSRV 180
             +Q+   SSVNG NVPMCV+DGLA++SGANDP RF+ FDAQ  NSN DL RTGSVSS V
Sbjct: 121 FSKQMCHLSSVNGDNVPMCVNDGLATNSGANDPPRFRKFDAQDANSNNDLARTGSVSSTV 180

Query: 181 QMASHKENGVVSSGSLENSNRCSVSESCWRAFFSIIDSQKFISLCKLLSENFRGIKADNV 240
           QMASH+ENGVVS+GSLEN +RCSV+ESCWRAF SIIDSQKFISLCKLLSENFRGIKADNV
Sbjct: 181 QMASHRENGVVSNGSLENPDRCSVNESCWRAFLSIIDSQKFISLCKLLSENFRGIKADNV 240

Query: 241 FDFSLVNSRIKEGAYENSPMLFLSD---IWRKFQAIGTELVSLAESLSDFSRAAYQEKVG 300
           FDFSLVNSRIKEGAYENSP LFLSD   IWRKFQAIGTELVSLAESLSDFSR  Y+EKVG
Sbjct: 241 FDFSLVNSRIKEGAYENSPTLFLSDVQQIWRKFQAIGTELVSLAESLSDFSRTTYREKVG 300

Query: 301 VSGRNVFEDGKHEFSTRESPSHAKAEHMDGYGVYKVCACRSCGEKAEGIDCLVCDSCEEI 360
           VSGRNVFEDGKHE ST ESPSHAKAEHMDGYG YKVCACRSCGEKAEGI+CLVCDSCEEI
Sbjct: 301 VSGRNVFEDGKHESSTWESPSHAKAEHMDGYGAYKVCACRSCGEKAEGINCLVCDSCEEI 360

Query: 361 YHISCIKPPVKEIPLKSWFCASCISSGFSLCHENCVVCERLNTPTMLANGVGEILETSEV 420
           YHISCIKPPVKEIPLKSW+CASC  SGFSL H+NCVVCERLNTPTMLANGVGEILETSE 
Sbjct: 361 YHISCIKPPVKEIPLKSWYCASCTGSGFSLRHDNCVVCERLNTPTMLANGVGEILETSEH 420

Query: 421 N-----ENLNCCLDDGIEQLNDSQDLGPCKICGNEVESGDNFRICSHLFCPHKCYHTRCL 480
           N     +N N C DDG EQL DSQDLGPCKICGN VE GD +R+CSHLFCPH+ YHTRCL
Sbjct: 421 NHFHGDDNPNYCTDDGFEQLKDSQDLGPCKICGNGVEGGDKYRMCSHLFCPHQFYHTRCL 480

Query: 481 TKKQLKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWFC 540
           TK QLKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLA IPKG+WFC
Sbjct: 481 TKNQLKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAAIPKGQWFC 540

Query: 541 SKCEAGIEAIRRVKRAYENFEHKRSKRGKDTFGGYGNSGKKRINGGDQESDTGRRGMDML 600
           SKCEAGI+AIRRVK AYENFE+KRSKRGKDTFG    SGKKRINGGD+ESDTGR GMDML
Sbjct: 541 SKCEAGIQAIRRVKMAYENFENKRSKRGKDTFG---KSGKKRINGGDEESDTGRGGMDML 600

Query: 601 LTAAKTLNYEEGLANL 608
           LTAAKTLNYEEGL NL
Sbjct: 601 LTAAKTLNYEEGLTNL 611

[Close]

BLAST of Cp4.1LG02g00120 vs. ExPASy TrEMBL
Match: A0A6J1DJP9 (PHD finger protein EHD3 OS=Momordica charantia OX=3673 GN=LOC111021164 PE=4 SV=1)

HSP 1 Score: 1044 bits (2700), Expect = 0.0
Identity = 518/616 (84.09%), Postives = 552/616 (89.61%), Query Frame = 0


Query: 1   MVIEDGESNGNCTGRPLEVKFMKSVAGKNGIGMGVLNVVTEGVPGTSDGFRTYKRRKQTK 60
           MVIED +SNG+CTG  LEVKF+KS AGKNG+GMGVLNVVTEGVPGTSDGFRTYKRRK TK
Sbjct: 1   MVIEDEKSNGDCTGHALEVKFVKSEAGKNGVGMGVLNVVTEGVPGTSDGFRTYKRRKHTK 60

Query: 61  LAFGSECKGDGKVHVEAASQLVVQTVQETLYTLRGSNSCDHVHSPMVNLDECPEDLWRSV 120
           L  GSECKGDGK HVEAA QL+  T +ET +TLRGSNSCDHVHS MVNLDECPED+WRSV
Sbjct: 61  LTSGSECKGDGKTHVEAAGQLM--TDEETFHTLRGSNSCDHVHSSMVNLDECPEDIWRSV 120

Query: 121 LLQQIYQSSSVNGGNVPMCVHDGLASHSGANDPSRFKIFDAQHGNSNIDLLRTGSVSSRV 180
           LLQQI  SSSVNGGNV   V DG+  HSG NDPSR  IFDAQ GN N DL  T S+S+ V
Sbjct: 121 LLQQICHSSSVNGGNV---VQDGI--HSGFNDPSR--IFDAQDGNRNNDLACTESMSNTV 180

Query: 181 QMASHKENGVVSSGSLENSNRCSVSESCWRAFFSIIDSQKFISLCKLLSENFRGIKADNV 240
           QMASH+ NGVVS+GSLENSNRC+++ESC RAFFSIIDSQKF+SLCKLLSENFRGIKADNV
Sbjct: 181 QMASHRGNGVVSNGSLENSNRCNINESCRRAFFSIIDSQKFVSLCKLLSENFRGIKADNV 240

Query: 241 FDFSLVNSRIKEGAYENSPMLFLSD---IWRKFQAIGTELVSLAESLSDFSRAAYQEKVG 300
           FDFSLVNSRIKEGAYENSPMLFLSD   IWRKFQAIGTELVSLA SLSDFSRAAY+EKVG
Sbjct: 241 FDFSLVNSRIKEGAYENSPMLFLSDVQQIWRKFQAIGTELVSLAASLSDFSRAAYREKVG 300

Query: 301 VSGRNVFEDGKHEFSTRESPSHAKAEHMDGYGVYKVCACRSCGEKAEGIDCLVCDSCEEI 360
           VSGRNVFEDGKHEFST ESPSHAKAEHMDG G YKVC CRSCGEKAEGIDCLVCDSCEEI
Sbjct: 301 VSGRNVFEDGKHEFSTWESPSHAKAEHMDGNGTYKVCTCRSCGEKAEGIDCLVCDSCEEI 360

Query: 361 YHISCIKPPVKEIPLKSWFCASCISSGFSLCHENCVVCERLNTPTMLANGVGEILETSEV 420
           YHISCIKPPVKEIPLKSW+CASCI+SGF   H+NCVVCERLNTPT LANGVGEIL TSE 
Sbjct: 361 YHISCIKPPVKEIPLKSWYCASCIASGFCSRHDNCVVCERLNTPTTLANGVGEILNTSEQ 420

Query: 421 N-----ENLNCCLDDGIEQLNDSQDLGPCKICGNEVESGDNFRICSHLFCPHKCYHTRCL 480
           N     E+ NCC+DDGIEQL +S+DLGPCKICGNEVESGD FRICSHLFCPHKCYHT CL
Sbjct: 421 NHDHRDEDPNCCIDDGIEQLKESKDLGPCKICGNEVESGDKFRICSHLFCPHKCYHTWCL 480

Query: 481 TKKQLKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWFC 540
           TKKQLKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLA IPKGKWFC
Sbjct: 481 TKKQLKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAAIPKGKWFC 540

Query: 541 SKCEAGIEAIRRVKRAYENFEHKRSKRGKDTFGGYGNSGKKRINGGDQESDTGRRGMDML 600
            KCEAGI+AIRRVK+AYENFE+K++KRGKDTFGGYG SGKKR+N GD+ES+ G  GMDML
Sbjct: 541 DKCEAGIQAIRRVKKAYENFENKQNKRGKDTFGGYGTSGKKRVNSGDEESEKGMGGMDML 600

Query: 601 LTAAKTLNYEEGLANL 608
           LTAAKTLNYEEGLAN+
Sbjct: 601 LTAAKTLNYEEGLANI 607

[Close]

BLAST of Cp4.1LG02g00120 vs. TAIR 10
Match: AT1G77250.1 (RING/FYVE/PHD-type zinc finger family protein )

HSP 1 Score: 338.6 bits (867), Expect = 1.1e-92
Identity = 171/424 (40.33%), Postives = 246/424 (58.02%), Query Frame = 0


Query: 195 SLENSNRCSVSESCWRAFFSIIDSQKFISLCKLLSENFRGIKADNVFDFSLVNSRIKEGA 254
           S E++N  +V+  C      ++ S++F SL +LLSEN +G+K D+    +L+++R+KEG 
Sbjct: 113 SSESTNHETVTAGCQHVLSHVLASKEFASLNRLLSENLQGVKIDDFTSRTLIDTRMKEGV 172

Query: 255 YENSPMLF---LSDIWRKFQAIGTELVSLAESLSDFSRAAYQEKVGVSGRNVFEDGKHEF 314
           YE SP+LF   L ++W+K Q +G ++  LA SL + SR +Y+E++             +F
Sbjct: 173 YEGSPLLFSTDLQEVWQKMQDVGNDMAVLANSLLELSRTSYKEQL------------KQF 232

Query: 315 STRESPSHAKAEHMDGYGVYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPPVKEIP 374
            T ES     AE++    V  +  C+ CGEKAE  DCL CD CE++YH+SC +P  K +P
Sbjct: 233 YTGESKPCPNAENIRNDSVSDI--CKLCGEKAEARDCLACDHCEDMYHVSCAQPGGKGMP 292

Query: 375 LKSWFCASCISSGFSLCHENCVVCERLNTPTMLANGVGEI-------LETSEVNENLNCC 434
             SW+C  C S G    HENCVVCE++ T  M+      +        +++E  EN +C 
Sbjct: 293 THSWYCLDCTSKGIGSPHENCVVCEKMKTQGMMKTDNRSVDTSTECKEDSNESEENSSCN 352

Query: 435 LDDGIEQLNDSQDLGPCKICGNEVESGDNFRICSHLFCPHKCYHTRCLTKKQLKSYDTCW 494
           ++  +  +  S+D   C+ CG +V+SG  +  C H FCPHK YH RCLT +Q+K +   W
Sbjct: 353 MNHEVHHVEMSRDSELCRTCGTKVDSGGKYITCDHPFCPHKYYHIRCLTSRQIKLHGVRW 412

Query: 495 YCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWFCSKCEAGIEAIRR 554
           YC SCLCR CL ++DDDKIVLCDGCD  YHIYCMRPP   +P G+WFC+ C+A I  +++
Sbjct: 413 YCSSCLCRNCLTDKDDDKIVLCDGCDDAYHIYCMRPPCESVPNGEWFCTACKAAILKVQK 472

Query: 555 VKRAYENFEHKRSKRGKDTFGGYGNSGKKRINGGDQESDTGR-----RGMDMLLTAAKTL 604
            ++A+E        +  +T         K + G  Q  D G       GMDMLL AA TL
Sbjct: 473 ARKAFE--------KKMETVQKQKGIKPKNLQGKPQSKDNGELDQSVGGMDMLLNAADTL 514

[Close]

BLAST of Cp4.1LG02g00120 vs. TAIR 10
Match: AT3G01460.1 (methyl-CPG-binding domain 9 )

HSP 1 Score: 75.5 bits (184), Expect = 1.7e-13
Identity = 29/72 (40.28%), Postives = 46/72 (63.89%), Query Frame = 0


Query: 490  LCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWFCSKCEAGIEAIRRVKRAY 549
            +C+ C +++DDD ++LCD CD  YH YC+ PPL  IP G W+C  C   + A R  + A 
Sbjct: 1289 VCKVCGVDKDDDSVLLCDTCDAEYHTYCLNPPLIRIPDGNWYCPSC---VIAKRMAQEAL 1348

Query: 550  ENFEHKRSKRGK 562
            E+++  R ++G+
Sbjct: 1349 ESYKLVRRRKGR 1357

HSP 2 Score: 45.4 bits (106), Expect = 1.8e-04
Identity = 25/86 (29.07%), Postives = 44/86 (51.16%), Query Frame = 0


Query: 305 EDGKHE-----FSTRESPSHAKAEHMDGYGVYKVCACRSCGEKAEGID-CLVCDSCEEIY 364
           +DG++E      S  ++P  A     +     +  +C +CG + E I+  +VCD+CE  +
Sbjct: 50  DDGEYEPVEVVRSIHDNPDPAPGAPAEVPEPDRDASCGACG-RPESIELVVVCDACERGF 109

Query: 365 HISCIKPPVKEIPLKSWFCASCISSG 385
           H+SC+   V+  P   W C+ C + G
Sbjct: 110 HMSCVNDGVEAAPSADWMCSDCRTGG 134

[Close]

BLAST of Cp4.1LG02g00120 vs. TAIR 10
Match: AT5G24330.1 (ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 )

HSP 1 Score: 64.7 bits (156), Expect = 2.9e-10
Identity = 21/46 (45.65%), Postives = 30/46 (65.22%), Query Frame = 0


Query: 490 LCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWFCSKC 536
           +C  C   +   K++LCD CD G+H++C+RP L  +PKG WFC  C
Sbjct: 34  VCEECSSGKQPAKLLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSC 79

[Close]

BLAST of Cp4.1LG02g00120 vs. TAIR 10
Match: AT5G44800.1 (chromatin remodeling 4 )

HSP 1 Score: 59.3 bits (142), Expect = 1.2e-08
Identity = 26/68 (38.24%), Postives = 34/68 (50.00%), Query Frame = 0


Query: 494 CLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWFCSKCEAGIEAIRRVKRAYENFE 553
           C+I      ++ CD C   YH  C+ PPL  IP GKW C KC    EA++ V R     +
Sbjct: 78  CVICDLGGDLLCCDSCPRTYHTACLNPPLKRIPNGKWICPKCSPNSEALKPVNRLDAIAK 137

Query: 554 HKRSKRGK 562
             R+K  K
Sbjct: 138 RARTKTKK 145

[Close]

BLAST of Cp4.1LG02g00120 vs. TAIR 10
Match: AT5G09790.1 (ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5 )

HSP 1 Score: 58.2 bits (139), Expect = 2.8e-08
Identity = 19/45 (42.22%), Postives = 28/45 (62.22%), Query Frame = 0


Query: 491 CRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWFCSKC 536
           C  C   + DD+++LCD CD G+H+ C+RP +  +P G W C  C
Sbjct: 67  CEKCGSGEGDDELLLCDKCDRGFHMKCLRPIVVRVPIGTWLCVDC 111

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g00120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6ZJM9	3.7e-58	30.60	PHD finger protein EHD3 OS=Oryza sativa subsp. japonica OX=39947 GN=EHD3 PE=1 SV...	[more]
Q38JA7	1.6e-13	39.77	Lysine-specific demethylase 5C OS=Canis lupus familiaris OX=9615 GN=KDM5C PE=2 S...	[more]
P41229	1.6e-13	39.77	Lysine-specific demethylase 5C OS=Homo sapiens OX=9606 GN=KDM5C PE=1 SV=2	[more]
P41230	1.6e-13	39.77	Lysine-specific demethylase 5C OS=Mus musculus OX=10090 GN=Kdm5c PE=1 SV=4	[more]
A1YVX4	1.6e-13	39.77	Lysine-specific demethylase 5C OS=Sus scrofa OX=9823 GN=KDM5C PE=2 SV=1	[more]

BLAST of Cp4.1LG02g00120 vs. NCBI nr


Match Name	Identity	Description
XP_023525092.1	99.51	PHD finger protein EHD3-like [Cucurbita pepo subsp. pepo] >XP_023525093.1 PHD fi...	[more]
XP_022926263.1	97.88	PHD finger protein EHD3-like [Cucurbita moschata] >XP_022926264.1 PHD finger pro...	[more]
XP_022981421.1	97.39	PHD finger protein EHD3-like [Cucurbita maxima] >XP_022981422.1 PHD finger prote...	[more]
KAG6607698.1	94.14	PHD finger protein EHD3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022975583.1	84.25	PHD finger protein EHD3-like [Cucurbita maxima] >XP_022975586.1 PHD finger prote...	[more]

BLAST of Cp4.1LG02g00120 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1EE29	97.88	PHD finger protein EHD3-like OS=Cucurbita moschata OX=3662 GN=LOC111433442 PE=4 ...	[more]
A0A6J1IZG8	97.39	PHD finger protein EHD3-like OS=Cucurbita maxima OX=3661 GN=LOC111480549 PE=4 SV...	[more]
A0A6J1IEM0	84.25	PHD finger protein EHD3-like OS=Cucurbita maxima OX=3661 GN=LOC111475137 PE=4 SV...	[more]
A0A6J1F863	83.93	PHD finger protein EHD3-like OS=Cucurbita moschata OX=3662 GN=LOC111442986 PE=4 ...	[more]
A0A6J1DJP9	84.09	PHD finger protein EHD3 OS=Momordica charantia OX=3673 GN=LOC111021164 PE=4 SV=1	[more]

BLAST of Cp4.1LG02g00120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77250.1	1.1e-92	40.33	RING/FYVE/PHD-type zinc finger family protein	[more]
AT3G01460.1	1.7e-13	40.28	methyl-CPG-binding domain 9	[more]
AT5G24330.1	2.9e-10	45.65	ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6	[more]
AT5G44800.1	1.2e-08	38.24	chromatin remodeling 4	[more]
AT5G09790.1	2.8e-08	42.22	ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001965	Zinc finger, PHD-type	SMART	SM00249	PHD_3	coord: 440..490 e-value: 0.025 score: 23.8 coord: 335..381 e-value: 2.2E-8 score: 43.9 coord: 493..536 e-value: 7.0E-10 score: 48.8
IPR019787	Zinc finger, PHD-finger	PFAM	PF00628	PHD	coord: 336..382 e-value: 6.4E-8 score: 32.4 coord: 491..536 e-value: 1.1E-12 score: 47.6
IPR019787	Zinc finger, PHD-finger	PROSITE	PS50016	ZF_PHD_2	coord: 488..538 score: 9.8727
IPR019787	Zinc finger, PHD-finger	PROSITE	PS50016	ZF_PHD_2	coord: 333..383 score: 8.9471
None	No IPR available	GENE3D	2.30.30.1150		coord: 265..383 e-value: 5.5E-17 score: 64.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 560..586
None	No IPR available	PANTHER	PTHR10615	HISTONE ACETYLTRANSFERASE	coord: 138..603
None	No IPR available	PANTHER	PTHR10615:SF190	D4, ISOFORM A	coord: 138..603
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 433..541 e-value: 9.1E-20 score: 72.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 441..489 score: 8.815781
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 332..381
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 491..542

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g00120.1	Cp4.1LG02g00120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding