Cp4.1LG01g25210 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g25210
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RING-CH-type domain-containing protein
Location	Cp4.1LG01: 20756211 .. 20758905 (+)
RNA-Seq Expression	Cp4.1LG01g25210
Synteny	Cp4.1LG01g25210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGAGTGGGAAGAAAGGGAAAGAAGGGAAGGGCCCCAAAAGAAAGGAATATGGAGAAAAGCAAAGTAAAAAGAGTGTAAATGTGGGACAAGAATGGGGCATGATGGCGCCTCAGCCTCAGCCTCAGCCACAGCCTCTGCCTCTCTCGGTCACAGTACTTGGCTTGCTGCACTCAACCTCTCAAAAACTTAATTAAATTGGTACTCCTTCCTTCTTCTTCTCTTGGATCGGGTTGAATGGATGAGTGAGATACCACATCGGTTGGAGAATGTAACGAAACATTTCTTATTAGAATTGGGTAGGGGTTACCGGTTGAAGTTGAGGTGTAGTTGGGAAAAGGGTTGATGAAATTTTGTTGCTTTTGTACACAATTTGTGATGTAATTTTTGTGTTGAAGAACGGTGTTTTCGGTGGAACAATGATTTGGGTGATCACGTTTCTACTTTTTTTTTTTCTTTGGAGTGATGTTTTTTGTTATTAAACAAAGGGGAAAAAAGAGAGAAGCTGAATGATACTCTGCATAATGCAGTGCAAAAATTGTGTCCTAAATCTTTCTCCGTCTTTTTCCTCTCTGCAACTCTGTTTTAGGCTGCATATCGACACTGACACCCAACAAACCCGCTGAAACAGGGGACACCCACCACACTTACTTCTACTCCTCATTCCATTACTGATTATCATATCAAAATCACACCCTAAATCTAATCATTTTTGTTTATGGCACCTCTTTCTCTCTCTGGGTTTTCATGGTTTTCGCCTCACACACCCATTTCATGAGGATTCACTGTCTGAATCTTCCGATGTCCACAATCCAAAACACCCACGTTGTGGCAATGGAAGAAGAGCAAGAAGAGCGGCCTTCCCGGGTTTCTACAGCTGGGACTGCCGCTTCACCGGCGTCTGATGATGTGCGGCGGTGCTCGGTCCAGTCGAGTGCTGAGATTGTGGGGGCGGCGGCGGTGGTGGAGAAAAGAAGGGGATCCTCTGTGTCGGAGTGCTCTGTTGAGATGGATCTGGAATGTGGGTTAGGTGAGATTAAGGTACATTTGGCGAAAATGGAGAGAGATTGCCGTATTTGTCATCTGAGCTTGGATGCTACGAATCATGAATCTGGAATCCCCATTGAGTTGGGTTGTTCTTGCAAGGATGATTTGGCTGCTGCTCATAAGCACTGTGCTGAGGCTTGGTTCAAGGTTAAGGGTGACATGTAAGTTCCCCCCAAATTAGAACAAAGCCCTCAAGTTTCATTTCTCTTATCTCCTGAGTTTTGTTCATATCTAGTGTTTAATTACATTTCATGCATTGGATATACTGAATAATATAGTACGAGAATCATGAAGCTCAAAACTTGTAGCTACACATTTGAGAGTATGTGGTCATCTGGACTCCTGCTTCTACCTAAATCCATCAGCCTTTGTTCTTACAAAGCTAAATCAAAATGGGACCGAGATCGCATTTGATTGACGAGACGACCGTGCTCGGCTTGGAGGTGTTTCTTGCACAAGAACTTACCCTTCCATCTCCTAAAACATGCTCATTTCATAGCCTACACATGCTTTTGCTTGCTTTAGTCTGATGCACAATTGATTAGAGTCCTTTTCTTAGCTGAGTTGAAATGTTTGAATGTTTCTTCACTGCTTCATTGCATGATGTTGGTATCTACACAAGTATAAGGAATCAACGTTTATTCCAAAAATGTCCAATCAGTGAGATTCTTTCCTGTTTAACCATCTTTGAACAGGATTGTTTTCTCATTCCTTGTACTATCTTCATTGTGTCTTCTGCTGAAGTTTGAAATATTTTTCTGTTTTCTTATTAAACCGTAAAGAATCGATGAGCTTAAGAAATGGATTGTGAGATCCCACATCGGTTGGAGAGGAGAACGAAGCATTCTTTATAAGGGTGTGAAAACCTCTTCTTAGTAGACGCGTTTAAAAACCTTGAGAGCAAGCTCGAAAGGGAAAGCCCAAAGAGAACCATGTGTAGTTTGGCTGGGAATTTGAATGTAAAAACGTTAAAGGGAAGCCCAAAAGTAATTTGAACGTTTCATTCTCTAGAAGATAACGAAAAAGGAACTTAATATGTGCCTTTTGTCTCTACTTGCACTTACCCATCTGCAATTTGTTGCAGCACCTGTGAAATCTGTGGATCAATTGCACACAATGTTACTAGTACTTGTGAAGCTGATTCGACCGAGCAGTGCAACGAGTCGAACGATGGAACGACAGCAACCACTGCAGCTGCTGTCATGGTGCCACCACACCCTATGGAGGCTCGAAACTTCTGGCAGGGCCACAGGTTCCTGAATTTCTTGCTTGCTTGCATGGTTTTCGCCTTCGTCATATCATGGCTATTTCACTTCAAAATACCCTCATAATGAAAACTACATTGGAAACAAGGGAGCATCAAACCAAAAAGATCGTCAAAAACTTCATCCCTCATCGTCTGCAACGACGGTGTCGTGGTTCGTATACTCATCTTCTGTTAATATGTATTAGTTTTAGAGCACTGTGGAAGAAGACTGGTTTGTGTATTGTATGATTGGGGCCTCGTGTTGTTTCATCGTACTGAAAACAGACAGGTTGGATTGATGTTTGAAAAGATGCTGTAACGATTCAGCTAGCTAGCTGGATTGCCCATTTTCTGTTCTTCATGCTGTTTTTTTGTCATGTCGTCTCGTTGTGGATAATCCTCTG

mRNA sequence

TGGAGTGGGAAGAAAGGGAAAGAAGGGAAGGGCCCCAAAAGAAAGGAATATGGAGAAAAGCAAAGTAAAAAGAGTGTAAATGTGGGACAAGAATGGGGCATGATGGCGCCTCAGCCTCAGCCTCAGCCACAGCCTCTGCCTCTCTCGGTCACAGTACTTGGCTTGCTGCACTCAACCTCTCAAAAACTTAATTAAATTGGTACTCCTTCCTTCTTCTTCTCTTGGATCGGGTTGAATGGATGAGTGAGATACCACATCGGTTGGAGAATGTAACGAAACATTTCTTATTAGAATTGGGTAGGGGTTACCGGTTGAAGTTGAGGTGTAGTTGGGAAAAGGGTTGATGAAATTTTGTTGCTTTTGTACACAATTTGTGATGTAATTTTTGTGTTGAAGAACGGTGTTTTCGGTGGAACAATGATTTGGGTGATCACGTTTCTACTTTTTTTTTTTCTTTGGAGTGATGTTTTTTGTTATTAAACAAAGGGGAAAAAAGAGAGAAGCTGAATGATACTCTGCATAATGCAGTGCAAAAATTGTGTCCTAAATCTTTCTCCGTCTTTTTCCTCTCTGCAACTCTGTTTTAGGCTGCATATCGACACTGACACCCAACAAACCCGCTGAAACAGGGGACACCCACCACACTTACTTCTACTCCTCATTCCATTACTGATTATCATATCAAAATCACACCCTAAATCTAATCATTTTTGTTTATGGCACCTCTTTCTCTCTCTGGGTTTTCATGGTTTTCGCCTCACACACCCATTTCATGAGGATTCACTGTCTGAATCTTCCGATGTCCACAATCCAAAACACCCACGTTGTGGCAATGGAAGAAGAGCAAGAAGAGCGGCCTTCCCGGGTTTCTACAGCTGGGACTGCCGCTTCACCGGCGTCTGATGATGTGCGGCGGTGCTCGGTCCAGTCGAGTGCTGAGATTGTGGGGGCGGCGGCGGTGGTGGAGAAAAGAAGGGGATCCTCTGTGTCGGAGTGCTCTGTTGAGATGGATCTGGAATGTGGGTTAGGTGAGATTAAGGTACATTTGGCGAAAATGGAGAGAGATTGCCGTATTTGTCATCTGAGCTTGGATGCTACGAATCATGAATCTGGAATCCCCATTGAGTTGGGTTGTTCTTGCAAGGATGATTTGGCTGCTGCTCATAAGCACTGTGCTGAGGCTTGGTTCAAGGTTAAGGGTGACATCACCTGTGAAATCTGTGGATCAATTGCACACAATGTTACTAGTACTTGTGAAGCTGATTCGACCGAGCAGTGCAACGAGTCGAACGATGGAACGACAGCAACCACTGCAGCTGCTGTCATGGTGCCACCACACCCTATGGAGGCTCGAAACTTCTGGCAGGGCCACAGGTTCCTGAATTTCTTGCTTGCTTGCATGGTTTTCGCCTTCGTCATATCATGGCTATTTCACTTCAAAATACCCTCATAATGAAAACTACATTGGAAACAAGGGAGCATCAAACCAAAAAGATCGTCAAAAACTTCATCCCTCATCGTCTGCAACGACGGTGTCGTGGTTCGTATACTCATCTTCTGTTAATATGTATTAGTTTTAGAGCACTGTGGAAGAAGACTGGTTTGTGTATTGTATGATTGGGGCCTCGTGTTGTTTCATCGTACTGAAAACAGACAGGTTGGATTGATGTTTGAAAAGATGCTGTAACGATTCAGCTAGCTAGCTGGATTGCCCATTTTCTGTTCTTCATGCTGTTTTTTTGTCATGTCGTCTCGTTGTGGATAATCCTCTG

Coding sequence (CDS)

ATGGTTTTCGCCTCACACACCCATTTCATGAGGATTCACTGTCTGAATCTTCCGATGTCCACAATCCAAAACACCCACGTTGTGGCAATGGAAGAAGAGCAAGAAGAGCGGCCTTCCCGGGTTTCTACAGCTGGGACTGCCGCTTCACCGGCGTCTGATGATGTGCGGCGGTGCTCGGTCCAGTCGAGTGCTGAGATTGTGGGGGCGGCGGCGGTGGTGGAGAAAAGAAGGGGATCCTCTGTGTCGGAGTGCTCTGTTGAGATGGATCTGGAATGTGGGTTAGGTGAGATTAAGGTACATTTGGCGAAAATGGAGAGAGATTGCCGTATTTGTCATCTGAGCTTGGATGCTACGAATCATGAATCTGGAATCCCCATTGAGTTGGGTTGTTCTTGCAAGGATGATTTGGCTGCTGCTCATAAGCACTGTGCTGAGGCTTGGTTCAAGGTTAAGGGTGACATCACCTGTGAAATCTGTGGATCAATTGCACACAATGTTACTAGTACTTGTGAAGCTGATTCGACCGAGCAGTGCAACGAGTCGAACGATGGAACGACAGCAACCACTGCAGCTGCTGTCATGGTGCCACCACACCCTATGGAGGCTCGAAACTTCTGGCAGGGCCACAGGTTCCTGAATTTCTTGCTTGCTTGCATGGTTTTCGCCTTCGTCATATCATGGCTATTTCACTTCAAAATACCCTCATAA

Protein sequence

MVFASHTHFMRIHCLNLPMSTIQNTHVVAMEEEQEERPSRVSTAGTAASPASDDVRRCSVQSSAEIVGAAAVVEKRRGSSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAAAHKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAAVMVPPHPMEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS

Homology

[Close]

BLAST of Cp4.1LG01g25210 vs. NCBI nr
Match: XP_023524419.1 (uncharacterized protein LOC111788319 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 473 bits (1217), Expect = 2.89e-168
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   MVFASHTHFMRIHCLNLPMSTIQNTHVVAMEEEQEERPSRVSTAGTAASPASDDVRRCSV 60
           MVFASHTHFMRIHCLNLPMSTIQNTHVVAMEEEQEERPSRVSTAGTAASPASDDVRRCSV
Sbjct: 1   MVFASHTHFMRIHCLNLPMSTIQNTHVVAMEEEQEERPSRVSTAGTAASPASDDVRRCSV 60

Query: 61  QSSAEIVGAAAVVEKRRGSSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNH 120
           QSSAEIVGAAAVVEKRRGSSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNH
Sbjct: 61  QSSAEIVGAAAVVEKRRGSSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNH 120

Query: 121 ESGIPIELGCSCKDDLAAAHKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNE 180
           ESGIPIELGCSCKDDLAAAHKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNE
Sbjct: 121 ESGIPIELGCSCKDDLAAAHKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNE 180

Query: 181 SNDGTTATTAAAVMVPPHPMEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 235
           SNDGTTATTAAAVMVPPHPMEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 SNDGTTATTAAAVMVPPHPMEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 235

[Close]

BLAST of Cp4.1LG01g25210 vs. NCBI nr
Match: KAG6602635.1 (hypothetical protein SDJN03_07868, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 419 bits (1078), Expect = 2.34e-147
Identity = 208/217 (95.85%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 19  MSTIQNTHVVAMEEEQEERPSRVSTAGTAASPASDDVRRCSVQSSAEIVGAAAVVEKRRG 78
           MSTI++THVVAMEEE+EERPSRVSTAGTAASPASDDVRRCSVQSSAEIVGAAA VEKRRG
Sbjct: 1   MSTIEDTHVVAMEEEKEERPSRVSTAGTAASPASDDVRRCSVQSSAEIVGAAAAVEKRRG 60

Query: 79  SSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAA 138
           SSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAA
Sbjct: 61  SSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAA 120

Query: 139 AHKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAAVMVPPH 198
           AHKHCAEAWFKVKGDITCEICGSIAHNVT TCEADSTEQCNESNDGTTATT AAV+VPPH
Sbjct: 121 AHKHCAEAWFKVKGDITCEICGSIAHNVTGTCEADSTEQCNESNDGTTATTVAAVVVPPH 180

Query: 199 PMEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 235
             EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 STEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 217

[Close]

BLAST of Cp4.1LG01g25210 vs. NCBI nr
Match: XP_022957596.1 (uncharacterized protein LOC111458938 [Cucurbita moschata])

HSP 1 Score: 418 bits (1074), Expect = 9.20e-147
Identity = 210/217 (96.77%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 19  MSTIQNTHVVAMEEEQEERPSRVSTAGTAASPASDDVRRCSVQSSAEIVGAAAVVEKRRG 78
           MSTI++THVVAMEEE+EERPSRVSTAGTAASPASDDVRRCSVQSSAEIVGAAAV EKRRG
Sbjct: 1   MSTIEDTHVVAMEEEKEERPSRVSTAGTAASPASDDVRRCSVQSSAEIVGAAAV-EKRRG 60

Query: 79  SSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAA 138
           SSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAA
Sbjct: 61  SSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAA 120

Query: 139 AHKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAAVMVPPH 198
           AHKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAAV+VPPH
Sbjct: 121 AHKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAAVVVPPH 180

Query: 199 PMEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 235
             EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 STEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 216

[Close]

BLAST of Cp4.1LG01g25210 vs. NCBI nr
Match: XP_022990745.1 (uncharacterized protein LOC111487535 [Cucurbita maxima])

HSP 1 Score: 417 bits (1072), Expect = 1.79e-146
Identity = 210/217 (96.77%), Postives = 211/217 (97.24%), Query Frame = 0


Query: 19  MSTIQNTHVVAMEEEQEERPSRVSTAGTAASPASDDVRRCSVQSSAEIVGAAAVVEKRRG 78
           MSTIQNTHVVAMEEEQEERPSRVSTAGT ASPASDDVRRCSVQSSAEIVGAA  VEKRRG
Sbjct: 1   MSTIQNTHVVAMEEEQEERPSRVSTAGTDASPASDDVRRCSVQSSAEIVGAA--VEKRRG 60

Query: 79  SSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAA 138
           SSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAA
Sbjct: 61  SSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAA 120

Query: 139 AHKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAAVMVPPH 198
           AHKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAAV+VPPH
Sbjct: 121 AHKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAAVVVPPH 180

Query: 199 PMEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 235
             E RNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 STETRNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of Cp4.1LG01g25210 vs. NCBI nr
Match: XP_022993070.1 (uncharacterized protein LOC111489196 [Cucurbita maxima] >XP_022993071.1 uncharacterized protein LOC111489196 [Cucurbita maxima])

HSP 1 Score: 352 bits (904), Expect = 7.11e-121
Identity = 181/217 (83.41%), Postives = 191/217 (88.02%), Query Frame = 0


Query: 19  MSTIQNTHVVAMEEEQEERPSRVSTAGTAASPASDDVRRCSVQSSAEIVGAAAVVEKRRG 78
           M+T QN+HVVAME  + E+PSR S AG  A  ASDDVR+CS QS AEIVGAAA  EKRR 
Sbjct: 1   MTTTQNSHVVAMEVGEVEQPSRTSAAGADALLASDDVRQCSGQSRAEIVGAAA--EKRRE 60

Query: 79  SSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAA 138
           SS SECSVEMDLECGL EIKVHL KM RDCRICHLSLDA+N ESGIPIELGCSCKDDLAA
Sbjct: 61  SSASECSVEMDLECGLSEIKVHLTKMGRDCRICHLSLDASNQESGIPIELGCSCKDDLAA 120

Query: 139 AHKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAAVMVPPH 198
           AHKHCAEAWFK+KGDITCEICGSIAHNVT T E DSTEQ N+SND TTATTAAAV+VPPH
Sbjct: 121 AHKHCAEAWFKIKGDITCEICGSIAHNVTVTYEPDSTEQRNDSNDETTATTAAAVVVPPH 180

Query: 199 PMEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 235
            +EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 SIEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of Cp4.1LG01g25210 vs. ExPASy TrEMBL
Match: A0A6J1GZN3 (uncharacterized protein LOC111458938 OS=Cucurbita moschata OX=3662 GN=LOC111458938 PE=4 SV=1)

HSP 1 Score: 418 bits (1074), Expect = 4.45e-147
Identity = 210/217 (96.77%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 19  MSTIQNTHVVAMEEEQEERPSRVSTAGTAASPASDDVRRCSVQSSAEIVGAAAVVEKRRG 78
           MSTI++THVVAMEEE+EERPSRVSTAGTAASPASDDVRRCSVQSSAEIVGAAAV EKRRG
Sbjct: 1   MSTIEDTHVVAMEEEKEERPSRVSTAGTAASPASDDVRRCSVQSSAEIVGAAAV-EKRRG 60

Query: 79  SSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAA 138
           SSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAA
Sbjct: 61  SSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAA 120

Query: 139 AHKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAAVMVPPH 198
           AHKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAAV+VPPH
Sbjct: 121 AHKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAAVVVPPH 180

Query: 199 PMEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 235
             EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 STEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 216

[Close]

BLAST of Cp4.1LG01g25210 vs. ExPASy TrEMBL
Match: A0A6J1JQX9 (uncharacterized protein LOC111487535 OS=Cucurbita maxima OX=3661 GN=LOC111487535 PE=4 SV=1)

HSP 1 Score: 417 bits (1072), Expect = 8.67e-147
Identity = 210/217 (96.77%), Postives = 211/217 (97.24%), Query Frame = 0


Query: 19  MSTIQNTHVVAMEEEQEERPSRVSTAGTAASPASDDVRRCSVQSSAEIVGAAAVVEKRRG 78
           MSTIQNTHVVAMEEEQEERPSRVSTAGT ASPASDDVRRCSVQSSAEIVGAA  VEKRRG
Sbjct: 1   MSTIQNTHVVAMEEEQEERPSRVSTAGTDASPASDDVRRCSVQSSAEIVGAA--VEKRRG 60

Query: 79  SSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAA 138
           SSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAA
Sbjct: 61  SSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAA 120

Query: 139 AHKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAAVMVPPH 198
           AHKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAAV+VPPH
Sbjct: 121 AHKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAAVVVPPH 180

Query: 199 PMEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 235
             E RNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 STETRNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of Cp4.1LG01g25210 vs. ExPASy TrEMBL
Match: A0A6J1JXH7 (uncharacterized protein LOC111489196 OS=Cucurbita maxima OX=3661 GN=LOC111489196 PE=4 SV=1)

HSP 1 Score: 352 bits (904), Expect = 3.44e-121
Identity = 181/217 (83.41%), Postives = 191/217 (88.02%), Query Frame = 0


Query: 19  MSTIQNTHVVAMEEEQEERPSRVSTAGTAASPASDDVRRCSVQSSAEIVGAAAVVEKRRG 78
           M+T QN+HVVAME  + E+PSR S AG  A  ASDDVR+CS QS AEIVGAAA  EKRR 
Sbjct: 1   MTTTQNSHVVAMEVGEVEQPSRTSAAGADALLASDDVRQCSGQSRAEIVGAAA--EKRRE 60

Query: 79  SSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAA 138
           SS SECSVEMDLECGL EIKVHL KM RDCRICHLSLDA+N ESGIPIELGCSCKDDLAA
Sbjct: 61  SSASECSVEMDLECGLSEIKVHLTKMGRDCRICHLSLDASNQESGIPIELGCSCKDDLAA 120

Query: 139 AHKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAAVMVPPH 198
           AHKHCAEAWFK+KGDITCEICGSIAHNVT T E DSTEQ N+SND TTATTAAAV+VPPH
Sbjct: 121 AHKHCAEAWFKIKGDITCEICGSIAHNVTVTYEPDSTEQRNDSNDETTATTAAAVVVPPH 180

Query: 199 PMEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 235
            +EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 SIEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of Cp4.1LG01g25210 vs. ExPASy TrEMBL
Match: A0A6J1FEB0 (uncharacterized protein LOC111444740 OS=Cucurbita moschata OX=3662 GN=LOC111444740 PE=4 SV=1)

HSP 1 Score: 351 bits (900), Expect = 1.40e-120
Identity = 179/217 (82.49%), Postives = 191/217 (88.02%), Query Frame = 0


Query: 19  MSTIQNTHVVAMEEEQEERPSRVSTAGTAASPASDDVRRCSVQSSAEIVGAAAVVEKRRG 78
           M+T QN+HVVAME  + E+P R S AG  A  AS+DVR+CS QS AEIVGAAA  EKRR 
Sbjct: 1   MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEIVGAAA--EKRRE 60

Query: 79  SSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAA 138
           SSVSECSVEMDLECGL EIK+HL KMERDCRICHLSLDA+N ESGIPIELGCSCKDDLAA
Sbjct: 61  SSVSECSVEMDLECGLAEIKLHLTKMERDCRICHLSLDASNQESGIPIELGCSCKDDLAA 120

Query: 139 AHKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAAVMVPPH 198
           AHKHCAEAWFK+KGDITCEICGSIAHNVT+T E DSTEQ N+SND TTAT AAAV+VPPH
Sbjct: 121 AHKHCAEAWFKIKGDITCEICGSIAHNVTATYEPDSTEQRNDSNDATTATAAAAVVVPPH 180

Query: 199 PMEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 235
             EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 STEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of Cp4.1LG01g25210 vs. ExPASy TrEMBL
Match: A0A0A0K8G0 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G009420 PE=4 SV=1)

HSP 1 Score: 339 bits (870), Expect = 5.18e-116
Identity = 172/224 (76.79%), Postives = 187/224 (83.48%), Query Frame = 0


Query: 19  MSTIQNTHVVAMEEEQEERPSRVSTAGTAASPASDDVRRCSVQSSAEI-------VGAAA 78
           M+T+Q +HVVAM+ EQ ++  R           SDDVRRCSV S A+I       V AAA
Sbjct: 1   MTTVQASHVVAMDVEQHQQRPRTD---------SDDVRRCSVHSRADILEEDGVAVAAAA 60

Query: 79  VVEKRRGSSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCS 138
            VEKRRGSSVSECSVEMDLECGL EIKVHLAK+E+DCRICHLSLDA+NHESGIPIELGCS
Sbjct: 61  AVEKRRGSSVSECSVEMDLECGLAEIKVHLAKIEKDCRICHLSLDASNHESGIPIELGCS 120

Query: 139 CKDDLAAAHKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAA 198
           CKDDLAAAHKHCAEAWFK+KGDITCEICGSIAHNVT T EADSTEQ NE N+ TTAT  A
Sbjct: 121 CKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATA 180

Query: 199 AVMVPPHPMEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 235
           A+++PPH  EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 AIVMPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of Cp4.1LG01g25210 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 213.0 bits (541), Expect = 2.6e-55
Identity = 119/211 (56.40%), Postives = 141/211 (66.82%), Query Frame = 0


Query: 30  MEEEQEERPSRVSTAGTAASPASD---DVRRCS--VQSSAEIVGAAAVVEKRRGSSVSEC 89
           ME  Q    + VS     +S   D   + RR S  V+   EI     V ++ R S+ S C
Sbjct: 1   MESVQPHLETFVSVKVINSSSGCDGDGEPRRSSGAVEKEEEI-----VKDEERRSNASVC 60

Query: 90  SVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAAAHKHCA 149
           SVE+DLE GL E  VHL++ ERDCRICH+SLDA N ESG+PIELGCSCK DLAAAHKHCA
Sbjct: 61  SVEIDLELGLPEKVVHLSQSERDCRICHMSLDAANLESGVPIELGCSCKADLAAAHKHCA 120

Query: 150 EAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAAVMVPPHPMEARN 209
           E WFK+KG+  CE+CGSIA NV  + E +S E  NE+N     T   +    P  +E R+
Sbjct: 121 ETWFKIKGNKICEVCGSIAGNVVGSVEVESEESRNEANGVENLTLRTS---GPRLVEGRS 180

Query: 210 FWQGHRFLNFLLACMVFAFVISWLFHFKIPS 236
           FWQGHRFLNFLLACMVFAFVISWLFHF +PS
Sbjct: 181 FWQGHRFLNFLLACMVFAFVISWLFHFNVPS 203

[Close]

BLAST of Cp4.1LG01g25210 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 138.3 bits (347), Expect = 8.1e-33
Identity = 67/131 (51.15%), Postives = 83/131 (63.36%), Query Frame = 0


Query: 105 ERDCRICHLSLDATNHESGIPIELGCSCKDDLAAAHKHCAEAWFKVKGDITCEICGSIAH 164
           E+DCRICHL L+++ HE G P+ LGCSCKDDL   HK CA+ WFK+KG+ TCEIC SIA 
Sbjct: 75  EKDCRICHLGLESSRHECGDPMVLGCSCKDDLGYVHKQCADTWFKIKGNKTCEICRSIAQ 134

Query: 165 NVTSTCEADSTEQCNESNDGTTATTAAAVMVPPHPMEARNFWQGHRFLNFLLACMVFAFV 224
           N     + +  +   E+N           MV     + R   +G+RFLNFLL CMV AFV
Sbjct: 135 NFFKV-DNEIGQTTVETNVDDVEAGNTPTMVATSDSDDRRLCRGNRFLNFLLTCMVCAFV 194

Query: 225 ISWLFHFKIPS 236
           ISW FHF +PS
Sbjct: 195 ISWFFHFNLPS 204

[Close]

BLAST of Cp4.1LG01g25210 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 125.9 bits (315), Expect = 4.2e-29
Identity = 69/137 (50.36%), Postives = 82/137 (59.85%), Query Frame = 0


Query: 102 AKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAAAHKHCAEAWFKVKGDITCEICGS 161
           A  E+DCRICHL ++ +    G  IELGCSCKDDLA AH+ CAE WFK+KGD TCEIC S
Sbjct: 78  APPEKDCRICHLGVETS---GGGAIELGCSCKDDLAVAHRQCAETWFKIKGDKTCEICQS 137

Query: 162 IAHNVTSTCE-ADSTEQCNESNDG--TTATTAAAVMVPPHPMEARNFWQGHRFLNFLLAC 221
           +A NV    E   ST +  E  +G  T A       V        N WQ  R +N +LAC
Sbjct: 138 VARNVGGANEMVGSTMEERELRNGEETAAGEGGGATV------VENRWQPQRVVNLVLAC 197

Query: 222 MVFAFVISWLFHFKIPS 236
           MVF F ISW+FHF + S
Sbjct: 198 MVFGFFISWIFHFHVSS 205

[Close]

BLAST of Cp4.1LG01g25210 vs. TAIR 10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 124.0 bits (310), Expect = 1.6e-28
Identity = 70/160 (43.75%), Postives = 86/160 (53.75%), Query Frame = 0


Query: 106 RDCRICHLSLDATNHES--------------------------------GIPIELGCSCK 165
           RDCRICHL L+ TN E+                                G+P++LGCSCK
Sbjct: 79  RDCRICHLPLE-TNKEAEDEDEEEEDDSDDDEDEEDEEEEEEEEEEEYYGLPLQLGCSCK 138

Query: 166 DDLAAAHKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAAV 225
            DL  AH  CAE WFK+KG++TCEICG++A NV         EQ N  +  +T + AAA 
Sbjct: 139 GDLGVAHSKCAETWFKIKGNMTCEICGAMALNVAG-------EQSNPESTASTHSQAAAG 198

Query: 226 MVPPHPMEARNFWQGHRFLNFLLACMVFAFVISWLFHFKI 234
                  E R  W G   +NFLLA MVFAFV+SWLFHFK+
Sbjct: 199 QSLTQ-TEPRGIWHGRPVMNFLLAAMVFAFVVSWLFHFKV 229

[Close]

BLAST of Cp4.1LG01g25210 vs. TAIR 10
Match: AT2G34200.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 77.0 bits (188), Expect = 2.2e-14
Identity = 59/169 (34.91%), Postives = 79/169 (46.75%), Query Frame = 0


Query: 33  EQEERPSRVSTAGTAASPASDDVRRCSVQSSAEIV------GAAAVVEKRRGSSVSECSV 92
           E+EE   +        S  + DV  CS   SA +V         AV      S +S+   
Sbjct: 27  EEEEDVKKPQQGKENDSRMAKDVVSCSSNISAHVVHEEVADNVTAVSCNEAESDISKAKA 86

Query: 93  E----MDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIP-------IELGCSCKDD 152
           +    +DL  G+G         ER CRICH   D +   SG         IE+GC CK++
Sbjct: 87  KEFHTIDLS-GVG---------ERICRICHFGSDQSPEASGDDKSVSPELIEIGCKCKNE 146

Query: 153 LAAAHKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDG 185
           L  AH HCAEAWFK++G+  CEICG  A NVT     D + + + + DG
Sbjct: 147 LGLAHFHCAEAWFKLRGNSVCEICGCTAKNVTVRLMEDWSGERDNTLDG 185

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g25210 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g25210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023524419.1	2.89e-168	100.00	uncharacterized protein LOC111788319 [Cucurbita pepo subsp. pepo]	[more]
KAG6602635.1	2.34e-147	95.85	hypothetical protein SDJN03_07868, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022957596.1	9.20e-147	96.77	uncharacterized protein LOC111458938 [Cucurbita moschata]	[more]
XP_022990745.1	1.79e-146	96.77	uncharacterized protein LOC111487535 [Cucurbita maxima]	[more]
XP_022993070.1	7.11e-121	83.41	uncharacterized protein LOC111489196 [Cucurbita maxima] >XP_022993071.1 uncharac...	[more]

BLAST of Cp4.1LG01g25210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GZN3	4.45e-147	96.77	uncharacterized protein LOC111458938 OS=Cucurbita moschata OX=3662 GN=LOC1114589...	[more]
A0A6J1JQX9	8.67e-147	96.77	uncharacterized protein LOC111487535 OS=Cucurbita maxima OX=3661 GN=LOC111487535...	[more]
A0A6J1JXH7	3.44e-121	83.41	uncharacterized protein LOC111489196 OS=Cucurbita maxima OX=3661 GN=LOC111489196...	[more]
A0A6J1FEB0	1.40e-120	82.49	uncharacterized protein LOC111444740 OS=Cucurbita moschata OX=3662 GN=LOC1114447...	[more]
A0A0A0K8G0	5.18e-116	76.79	RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G00942...	[more]

BLAST of Cp4.1LG01g25210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05830.1	2.6e-55	56.40	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.2	8.1e-33	51.15	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G37950.1	4.2e-29	50.36	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G59000.1	1.6e-28	43.75	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G34200.1	2.2e-14	34.91	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 107..160 e-value: 4.5E-17 score: 72.7
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 108..159 e-value: 2.2E-8 score: 34.1
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 100..166 score: 17.117064
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 102..162 e-value: 7.6E-13 score: 50.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..54
None	No IPR available	PANTHER	PTHR46214	ZINC FINGER, RING-CH-TYPE	coord: 21..235
None	No IPR available	PANTHER	PTHR46214:SF30	RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN	coord: 21..235
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 105..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g25210.1	Cp4.1LG01g25210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding