Cp4.1LG01g24050 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG01g24050
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description50S ribosomal protein L23, chloroplastic
LocationCp4.1LG01: 19211572 .. 19215288 (+)
RNA-Seq ExpressionCp4.1LG01g24050
SyntenyCp4.1LG01g24050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATAAGCCGCTTCGCCTTCTCAACTGCGGAAACCTAGCCTTCCAGATAGCAGCTGTTCGTCTGGGTAAGGACCTTTTATCTGCTTCACTTCCTCTTAAAATATCGATAGGTGATTGTTTGTTCTTAGTGTTTTTGAGTTTGTATATGTTTCCATTACTTGGATTCGTATGCGTAGTCTAAGATTTCGTTAGTATTTTTCTTGTTAATTTGTTGAGAGTTTTCTGCAATCCTTGATATATATTTCCGTCGCTTCTATTATCAACAGGTTGGAGTAGTGATTAGGTAGAGGATTCTGCAATGGCTCCAAAAGGTAAGTTATCGATTTCTCTCTCAAACTGTTATCGGTGGCTCTGTTTATAACATTGTGCATTAAGAGTTGAATATCTGCTACACATTCTTTTCCGTTTAATTTCGTTTCTCATGACCGCCGTTCGATATTAACCAGATATTATCGTAAGAACAAAATAACAAGATCTGAGTAATCTGTTTAGACTTTAGTCAGCGGGTTACTGACTTCAAACAAAAGGTTTGCTTGATTCTCACAGTCTCGCCTGTTTTCTTTTCTGGTCTTGTTAGCTGATTATTCCAAACAGATTGTGTAGGGCCAAAATCGAAAAATGGCGATTTGAAGTTTATTAATAGTTTTATCATTTTTATTAACTATGTTATTAAGTCTAATAAAATTTGTAGAAGATTATGGACTAAATTAATTATATTATTTTTATGAAATGGATGCTCTATGACTTTGTTGAAGTAAGTTTTATTCAATAAATTAGTTGGCTTAATGAAATTAATATCAAATTGATACTATCAAATGAGTGGATAACCTGCTCTTTTTTTTAATATCCTAGGTCCAGTTTGATAACAATTTAGTTTTTGGTTTTGAAAATTAAGCTTTTAATCCCCGTTTCTTTGTTTTGTTATTTACTTTGTAGTTATGTTTAAAAAATCAAGCCAAGTTTTGAAAACTGAAAATCACAATAGAGAATATTGAGAATACAAGCATAATTTTTCTAAACCAAAAACCAATTGGTTATCGAGCAAGGCCTTGTTTCCTTATCTTCTCTTCATTATTTGATACAATTTTGCCTACGTTTTTCCAGAATTTTATGTCTCGGATCTGATATTTATTTTCCTTCTGAAATAGGATTGTTTTTTAACACTGTTGCTCATTAATAGAATAGTACGCATGCATGGCGGAATTTGGCCTAATCAAGTTGAATTGATTTTTTCTATCATAATAAGAGATTGGGGTGCATGATAATGATAATTAGTCATTTATATGTGTGTTCCGTTGGGTAACAAACTTCTTTACCATATTCATCTAAGGCTGAATTCAAGAACGCCCTCCCAAGAAATTGTATACGTGATTAGTTTTAAGTGATTAAATCAGGTTTGATTGATACCTTTCTTTTCCCTCAGCTGACAGCTCCAAGAAGGCCGATCCTAAGGCTCAAGCCTTGAAAGCTGCGAAGGCAGTTAAATCAGGTCCAACATTTAAGAAAGCAAAGAAGATCAGGACATCTGTCACATTTCACCGGCCGAAGACATTGAAGAAGGATAGAAATCCCAAGTATCCACGTATTAGTGCTACTCCAAGGAACAAGTTGGACCAGTATCAGATTCTTAAATATCCTTTGACCACTGAGTCTGCAATGAAGAAGATCGAAGATAACAATACTTTGGTTTTCATTGTGGACATTCGTGCTGATAAGAAGAAGATCAAGGATGCCGTGAAGAAGATGTATGACATCCAGACCAAGAAAGTGAACACGTTGATCAGGTAATCTTATTCAAGCATTCCTATAGTTTCTTCTTAGAATATTGAGTTGGGCTGTTTATTTTGGATGTGATCTCAATTTTAAATATCATACTGGACCGAAATAATCCAATGTCTTGTGGAAAATAAGCTGATTAGGCAGTCTCATTTTATTGCCATATGTTTGCGAGTCACCTTATGAATAAAAATTAGACACTTCGATTATGAAGATCGTATAACTATAATTTATATTTTTGTTATTACACACCCCGATGACTGTTTTATATAATAATTGCAGGCCTGATGGAACCAAGAAGGCGTATGTTAGGCTGACTCCCGATTACGATGCTTTGGATGTTGCAAACAAGATTGGAATTATCTAAGAAGATATTAGCGTTTGTTTTTGTTTGAGAAAATTTGATTGATTCTGCTTCTGCGATGACAATTTTGATTTATGGAATGACCTCTATTTTCTCTAGAGAATTATTAAGTTGTTTTTCACTTAGCTGCTGCAATGCTGGTTGACTTCGTGCTTGGATTTTTTAGTTTGGATTTCTCTAGTCTTGGCCATTTTACTCCTTTCCACTAACGATCTGAAGAATTTTAACCCTACTTCCCTGGATTTCTAGTCATTACCATAATTTTTTTATTTGAGATTTTTTATATTACTTTTGTTATTGGATTTCATTTTATGTTTCACATTTAGGCGATATCTGATGCTTGTTTCTCCCCCATTTCTTTGTTATACTTCTACCATTATTAAAGAAACAAATGGATTGTTGTGTAAATTTTAGAAAATAGACATTAAATAATCAACTCTAAAAGTAGTGATAAACTAAGATTTAGAAACATAGGGTCCAATGGTAAATTAATTTATCTCCCTTTACCTTTAGGTTAATTGTTTGTTTTCTACTTTTCGTTTCTTTTTAAATCAAATCAATTTTGGAAAATTTAAAAATTTGTTTCTTGTTTTTGGATGTTGATTGTTGATTCAAACGTTTTCCATTGTGTCCATAATATTTATATTTAATTATGCTCTCTGCCATGCGGGAGACAGGAGCATCAAACATCAGACAAGTGTTTGGAACCGTATGAAGTGGAAGCTCCGCGTATGTTTTGAAGCCGCCGGATTCGACTTTTGAATAATAAGAAGGTGAGCTGATCTGCTTCCGGTGGAGCACTCTAGATGACCGACGCTGGTTACTGTCCGATTCGACTTTTGAATAATAAGAAGGTGAGCTGATCCACTTCGAGTGGATCACTCTAGATGACCCGGCGCCGGTTACCATAGAAGAGGGGTTGAAGTACTTTCGTTCGGTAAGACACATTATATTTTTATATTGATATTTAATATCTATTTTATGAGATTAAACTACAAATTCAATTGTTTAATCTAAGTTAGTTGATAAAAGTTTAGGAAAAACAATTATTAAAATAAAAAAGAAAAGAATTGATTGATATATGATGAAATAGATGTGAAAAAAAAGGGTAATATGGAAGGATTAGATTGAGAATAGAAAATAATTACGTGATTATGCACATTAAAATAAATAATAAAAATACTTGGATAAATTAAAAAAGAATTAATTTTACCAACATGTTTGATGATTAAGATTCTTCTATAATTGCTTCTAAGTTTTGACCCTACAAACAAAAGCAATCCAAACGGACCCAAAAAAGCACATGACTAACATCAAACCTTGTGGTGTTATTGCATTCTTTTAGGTATACATCCGACAATACAAGGCAAATTGCAATCCCTCTCAAGCTCACTCCTCAATCTAAAGAATTAAAGCACAAAAGGTGTGGAAACGTTACTGAAGTTTAGTTCTAAACAACCTGAGAGAATCAAACGTTTGAAATTGTGAAGGAATCAACAACTGTGCGCAATTTATCTTTCATTTTCTCCCACCTCCTCTCATTTGCTCCGGTCGTCAAAGTGTAGAATTTTCCTGCCA

mRNA sequence

TATAAGCCGCTTCGCCTTCTCAACTGCGGAAACCTAGCCTTCCAGATAGCAGCTGTTCGTCTGGGTTGGAGTAGTGATTAGGTAGAGGATTCTGCAATGGCTCCAAAAGCTGACAGCTCCAAGAAGGCCGATCCTAAGGCTCAAGCCTTGAAAGCTGCGAAGGCAGTTAAATCAGGTCCAACATTTAAGAAAGCAAAGAAGATCAGGACATCTGTCACATTTCACCGGCCGAAGACATTGAAGAAGGATAGAAATCCCAAGTATCCACGTATTAGTGCTACTCCAAGGAACAAGTTGGACCAGTATCAGATTCTTAAATATCCTTTGACCACTGAGTCTGCAATGAAGAAGATCGAAGATAACAATACTTTGGTTTTCATTGTGGACATTCGTGCTGATAAGAAGAAGATCAAGGATGCCGTGAAGAAGATGTATGACATCCAGACCAAGAAAGTGAACACGTTGATCAGGCCTGATGGAACCAAGAAGGCGTATGTTAGGCTGACTCCCGATTACGATGCTTTGGATGTTGCAAACAAGATTGGAATTATCTAAGAAGATATTAGCGTTTGTTTTTGTTTGAGAAAATTTGATTGATTCTGCTTCTGCGATGACAATTTTGATTTATGGAATGACCTCTATTTTCTCTAGAGAATTATTAAGTTGTTTTTCACTTAGCTGCTGCAATGCTGGTTGACTTCGTGCTTGGATTTTTTAGTTTGGATTTCTCTAGTCTTGGCCATTTTACTCCTTTCCACTAACGATCTGAAGAATTTTAACCCTACTTCCCTGGATTTCTAGTCATTACCATAATTTTTTTATTTGAGATTTTTTATATTACTTTTGTTATTGGATTTCATTTTATGTTTCACATTTAGGCGATATCTGATGCTTGTTTCTCCCCCATTTCTTTGTTATACTTCTACCATTATTAAAGAAACAAATGGATTGTTGTGTAAATTTTAGAAAATAGACATTAAATAATCAACTCTAAAAGTAGTGATAAACTAAGATTTAGAAACATAGGGTCCAATGAATTAAAGCACAAAAGGTGTGGAAACGTTACTGAAGTTTAGTTCTAAACAACCTGAGAGAATCAAACGTTTGAAATTGTGAAGGAATCAACAACTGTGCGCAATTTATCTTTCATTTTCTCCCACCTCCTCTCATTTGCTCCGGTCGTCAAAGTGTAGAATTTTCCTGCCA

Coding sequence (CDS)

ATGGCTCCAAAAGCTGACAGCTCCAAGAAGGCCGATCCTAAGGCTCAAGCCTTGAAAGCTGCGAAGGCAGTTAAATCAGGTCCAACATTTAAGAAAGCAAAGAAGATCAGGACATCTGTCACATTTCACCGGCCGAAGACATTGAAGAAGGATAGAAATCCCAAGTATCCACGTATTAGTGCTACTCCAAGGAACAAGTTGGACCAGTATCAGATTCTTAAATATCCTTTGACCACTGAGTCTGCAATGAAGAAGATCGAAGATAACAATACTTTGGTTTTCATTGTGGACATTCGTGCTGATAAGAAGAAGATCAAGGATGCCGTGAAGAAGATGTATGACATCCAGACCAAGAAAGTGAACACGTTGATCAGGCCTGATGGAACCAAGAAGGCGTATGTTAGGCTGACTCCCGATTACGATGCTTTGGATGTTGCAAACAAGATTGGAATTATCTAA

Protein sequence

MAPKADSSKKADPKAQALKAAKAVKSGPTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Homology
[Close]
BLAST of Cp4.1LG01g24050 vs. ExPASy Swiss-Prot
Match: Q9AT35 (60S ribosomal protein L23a OS=Daucus carota OX=4039 GN=RPL23A PE=2 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 3.2e-67
Identity = 140/154 (90.91%), Postives = 145/154 (94.16%), Query Frame = 0 

Query: 1   MAP-KADSSKKADPKAQALKAAKAVKSGPT-FKKAKKIRTSVTFHRPKTLKKDRNPKYPR 60
           M+P K D +KK+D KAQALK AKAVKSG T FKK KKIRTSVTFHRP+TL KDRNPKYPR
Sbjct: 1   MSPAKVDVTKKSDAKAQALKTAKAVKSGTTKFKKVKKIRTSVTFHRPRTLTKDRNPKYPR 60

Query: 61  ISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK 120
           ISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRA+KKKIKDAVKKMYDIQTK
Sbjct: 61  ISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKKIKDAVKKMYDIQTK 120

Query: 121 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153
           KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154

[Close]
BLAST of Cp4.1LG01g24050 vs. ExPASy Swiss-Prot
Match: Q07761 (60S ribosomal protein L23a OS=Nicotiana tabacum OX=4097 GN=RPL23A PE=2 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 4.6e-66
Identity = 139/154 (90.26%), Postives = 143/154 (92.86%), Query Frame = 0 

Query: 1   MAP-KADSSKKADPKAQALKAAKAVKSGPTF-KKAKKIRTSVTFHRPKTLKKDRNPKYPR 60
           MAP KAD SKK+DPKAQA K AKAVKSG T  KK++KIRT VTFHRPKTLKKDRNPKYPR
Sbjct: 1   MAPAKADPSKKSDPKAQAAKVAKAVKSGSTLKKKSQKIRTKVTFHRPKTLKKDRNPKYPR 60

Query: 61  ISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK 120
           ISA  RNKLDQY ILKYPLTTESAMKKIEDNNTLVFIVDI+ADKKKIKDAVKKMYDIQTK
Sbjct: 61  ISAPGRNKLDQYGILKYPLTTESAMKKIEDNNTLVFIVDIKADKKKIKDAVKKMYDIQTK 120

Query: 121 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153
           KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154

[Close]
BLAST of Cp4.1LG01g24050 vs. ExPASy Swiss-Prot
Match: O22644 (60S ribosomal protein L23A OS=Fritillaria agrestis OX=64177 GN=RPL23A PE=2 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.0e-65
Identity = 138/154 (89.61%), Postives = 141/154 (91.56%), Query Frame = 0 

Query: 1   MAPKADSSKKADPKAQALKAAKAVKSGPTF--KKAKKIRTSVTFHRPKTLKKDRNPKYPR 60
           MAP A  +KK D KAQALK AKAVKSG +   KKAKKIRTSVTFHRPKTLKKDRNPKYPR
Sbjct: 1   MAPPAKVAKKPDGKAQALKVAKAVKSGVSTLQKKAKKIRTSVTFHRPKTLKKDRNPKYPR 60

Query: 61  ISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK 120
           ISA PRNKLD YQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIK AVKKMYDIQTK
Sbjct: 61  ISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKAAVKKMYDIQTK 120

Query: 121 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153
           KVNTLIRPDGTKKAYVRLTPDYDALD+ANKIGII
Sbjct: 121 KVNTLIRPDGTKKAYVRLTPDYDALDIANKIGII 154

[Close]
BLAST of Cp4.1LG01g24050 vs. ExPASy Swiss-Prot
Match: Q8LD46 (60S ribosomal protein L23a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL23AA PE=2 SV=2)

HSP 1 Score: 248.8 bits (634), Expect = 3.9e-65
Identity = 137/154 (88.96%), Postives = 142/154 (92.21%), Query Frame = 0 

Query: 1   MAP-KADSSKKADPKAQALKAAKAVKSGPTFKKA-KKIRTSVTFHRPKTLKKDRNPKYPR 60
           M+P K D++KKADPKA+ALKAAKAVKSG  FKK  KKIRT VTFHRPKTL K R  KYP+
Sbjct: 1   MSPAKVDTTKKADPKAKALKAAKAVKSGQAFKKKDKKIRTKVTFHRPKTLTKPRTGKYPK 60

Query: 61  ISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK 120
           ISATPRNKLD YQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK
Sbjct: 61  ISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK 120

Query: 121 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153
           KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154

[Close]
BLAST of Cp4.1LG01g24050 vs. ExPASy Swiss-Prot
Match: Q9M3C3 (60S ribosomal protein L23a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL23AB PE=2 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.1e-64
Identity = 137/154 (88.96%), Postives = 141/154 (91.56%), Query Frame = 0 

Query: 1   MAP-KADSSKKADPKAQALKAAKAVKSGPTFKK-AKKIRTSVTFHRPKTLKKDRNPKYPR 60
           M+P K D +KKADPKA+ALKAAKAVKSG   KK AKKIRT VTFHRPKTL   R PKYP+
Sbjct: 1   MSPAKVDVTKKADPKAKALKAAKAVKSGQIVKKPAKKIRTKVTFHRPKTLTVPRKPKYPK 60

Query: 61  ISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK 120
           ISATPRNKLD YQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK
Sbjct: 61  ISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK 120

Query: 121 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153
           KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154

[Close]
BLAST of Cp4.1LG01g24050 vs. NCBI nr
Match: XP_022922609.1 (60S ribosomal protein L23a-like [Cucurbita moschata] >XP_022990476.1 60S ribosomal protein L23a-like isoform X1 [Cucurbita maxima] >XP_023541243.1 60S ribosomal protein L23a-like [Cucurbita pepo subsp. pepo] >KAG7033024.1 60S ribosomal protein L23a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 286 bits (733), Expect = 3.27e-97
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0 

Query: 1   MAPKADSSKKADPKAQALKAAKAVKSGPTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRIS 60
           MAPKADSSKKADPKAQALKAAKAVKSGPTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRIS
Sbjct: 1   MAPKADSSKKADPKAQALKAAKAVKSGPTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRIS 60

Query: 61  ATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV 120
           ATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV
Sbjct: 61  ATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV 120

Query: 121 NTLIRPDGTKKAYVRLTPDYDALDVANKIGII 152
           NTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 NTLIRPDGTKKAYVRLTPDYDALDVANKIGII 152

[Close]
BLAST of Cp4.1LG01g24050 vs. NCBI nr
Match: KAG6602342.1 (60S ribosomal protein L23a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 285 bits (729), Expect = 1.33e-96
Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0 

Query: 1   MAPKADSSKKADPKAQALKAAKAVKSGPTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRIS 60
           MAPKADSSKKADPKAQALKAAKAVKSGPTFKK KKIRTSVTFHRPKTLKKDRNPKYPRIS
Sbjct: 1   MAPKADSSKKADPKAQALKAAKAVKSGPTFKKTKKIRTSVTFHRPKTLKKDRNPKYPRIS 60

Query: 61  ATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV 120
           ATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV
Sbjct: 61  ATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV 120

Query: 121 NTLIRPDGTKKAYVRLTPDYDALDVANKIGII 152
           NTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 NTLIRPDGTKKAYVRLTPDYDALDVANKIGII 152

[Close]
BLAST of Cp4.1LG01g24050 vs. NCBI nr
Match: XP_022991052.1 (60S ribosomal protein L23a [Cucurbita maxima])

HSP 1 Score: 281 bits (719), Expect = 4.46e-95
Identity = 147/152 (96.71%), Postives = 151/152 (99.34%), Query Frame = 0 

Query: 1   MAPKADSSKKADPKAQALKAAKAVKSGPTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRIS 60
           MAPKAD++KKADPKAQALK AKAVKSGPTFKKAKKIRTSVTFHRP+TLKKDRNPKYPRIS
Sbjct: 1   MAPKADNTKKADPKAQALKTAKAVKSGPTFKKAKKIRTSVTFHRPRTLKKDRNPKYPRIS 60

Query: 61  ATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV 120
           ATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV
Sbjct: 61  ATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV 120

Query: 121 NTLIRPDGTKKAYVRLTPDYDALDVANKIGII 152
           NTLIRPDGTKKAYVRLTPDYDALDVANKIGI+
Sbjct: 121 NTLIRPDGTKKAYVRLTPDYDALDVANKIGIV 152

[Close]
BLAST of Cp4.1LG01g24050 vs. NCBI nr
Match: XP_004140408.1 (60S ribosomal protein L23a isoform X1 [Cucumis sativus])

HSP 1 Score: 280 bits (717), Expect = 8.99e-95
Identity = 148/152 (97.37%), Postives = 149/152 (98.03%), Query Frame = 0 

Query: 1   MAPKADSSKKADPKAQALKAAKAVKSGPTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRIS 60
           MAPKAD +KKADPKAQALK AKAVKSGPTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRIS
Sbjct: 1   MAPKADMTKKADPKAQALKTAKAVKSGPTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRIS 60

Query: 61  ATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV 120
            TPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV
Sbjct: 61  VTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV 120

Query: 121 NTLIRPDGTKKAYVRLTPDYDALDVANKIGII 152
           NTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 NTLIRPDGTKKAYVRLTPDYDALDVANKIGII 152

[Close]
BLAST of Cp4.1LG01g24050 vs. NCBI nr
Match: XP_022995723.1 (60S ribosomal protein L23a [Cucurbita maxima])

HSP 1 Score: 280 bits (717), Expect = 9.31e-95
Identity = 151/153 (98.69%), Postives = 151/153 (98.69%), Query Frame = 0 

Query: 1   MAPKADSSKKADPKAQALKAAKAVKSGPTFKK-AKKIRTSVTFHRPKTLKKDRNPKYPRI 60
           MAPKADSSKKADPKAQALK AKAVKSGPTFKK AKKIRTSVTFHRPKTLKKDRNPKYPRI
Sbjct: 1   MAPKADSSKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPRI 60

Query: 61  SATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKK 120
           SATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKK
Sbjct: 61  SATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKK 120

Query: 121 VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 152
           VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153

[Close]
BLAST of Cp4.1LG01g24050 vs. ExPASy TrEMBL
Match: A0A6J1JN21 (50S ribosomal protein L23, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111487327 PE=3 SV=1)

HSP 1 Score: 286 bits (733), Expect = 1.58e-97
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0 

Query: 1   MAPKADSSKKADPKAQALKAAKAVKSGPTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRIS 60
           MAPKADSSKKADPKAQALKAAKAVKSGPTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRIS
Sbjct: 1   MAPKADSSKKADPKAQALKAAKAVKSGPTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRIS 60

Query: 61  ATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV 120
           ATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV
Sbjct: 61  ATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV 120

Query: 121 NTLIRPDGTKKAYVRLTPDYDALDVANKIGII 152
           NTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 NTLIRPDGTKKAYVRLTPDYDALDVANKIGII 152

[Close]
BLAST of Cp4.1LG01g24050 vs. ExPASy TrEMBL
Match: A0A6J1E3W3 (50S ribosomal protein L23, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111430563 PE=3 SV=1)

HSP 1 Score: 286 bits (733), Expect = 1.58e-97
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0 

Query: 1   MAPKADSSKKADPKAQALKAAKAVKSGPTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRIS 60
           MAPKADSSKKADPKAQALKAAKAVKSGPTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRIS
Sbjct: 1   MAPKADSSKKADPKAQALKAAKAVKSGPTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRIS 60

Query: 61  ATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV 120
           ATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV
Sbjct: 61  ATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV 120

Query: 121 NTLIRPDGTKKAYVRLTPDYDALDVANKIGII 152
           NTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 NTLIRPDGTKKAYVRLTPDYDALDVANKIGII 152

[Close]
BLAST of Cp4.1LG01g24050 vs. ExPASy TrEMBL
Match: A0A6J1JKM4 (50S ribosomal protein L23, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111487755 PE=3 SV=1)

HSP 1 Score: 281 bits (719), Expect = 2.16e-95
Identity = 147/152 (96.71%), Postives = 151/152 (99.34%), Query Frame = 0 

Query: 1   MAPKADSSKKADPKAQALKAAKAVKSGPTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRIS 60
           MAPKAD++KKADPKAQALK AKAVKSGPTFKKAKKIRTSVTFHRP+TLKKDRNPKYPRIS
Sbjct: 1   MAPKADNTKKADPKAQALKTAKAVKSGPTFKKAKKIRTSVTFHRPRTLKKDRNPKYPRIS 60

Query: 61  ATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV 120
           ATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV
Sbjct: 61  ATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV 120

Query: 121 NTLIRPDGTKKAYVRLTPDYDALDVANKIGII 152
           NTLIRPDGTKKAYVRLTPDYDALDVANKIGI+
Sbjct: 121 NTLIRPDGTKKAYVRLTPDYDALDVANKIGIV 152

[Close]
BLAST of Cp4.1LG01g24050 vs. ExPASy TrEMBL
Match: A0A0A0KQU4 (50S ribosomal protein L23, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_5G264270 PE=3 SV=1)

HSP 1 Score: 280 bits (717), Expect = 4.35e-95
Identity = 148/152 (97.37%), Postives = 149/152 (98.03%), Query Frame = 0 

Query: 1   MAPKADSSKKADPKAQALKAAKAVKSGPTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRIS 60
           MAPKAD +KKADPKAQALK AKAVKSGPTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRIS
Sbjct: 1   MAPKADMTKKADPKAQALKTAKAVKSGPTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRIS 60

Query: 61  ATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV 120
            TPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV
Sbjct: 61  VTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV 120

Query: 121 NTLIRPDGTKKAYVRLTPDYDALDVANKIGII 152
           NTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 NTLIRPDGTKKAYVRLTPDYDALDVANKIGII 152

[Close]
BLAST of Cp4.1LG01g24050 vs. ExPASy TrEMBL
Match: A0A6J1K8U2 (50S ribosomal protein L23, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111491145 PE=3 SV=1)

HSP 1 Score: 280 bits (717), Expect = 4.51e-95
Identity = 151/153 (98.69%), Postives = 151/153 (98.69%), Query Frame = 0 

Query: 1   MAPKADSSKKADPKAQALKAAKAVKSGPTFKK-AKKIRTSVTFHRPKTLKKDRNPKYPRI 60
           MAPKADSSKKADPKAQALK AKAVKSGPTFKK AKKIRTSVTFHRPKTLKKDRNPKYPRI
Sbjct: 1   MAPKADSSKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPRI 60

Query: 61  SATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKK 120
           SATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKK
Sbjct: 61  SATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKK 120

Query: 121 VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 152
           VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153

[Close]
BLAST of Cp4.1LG01g24050 vs. TAIR 10
Match: AT2G39460.1 (ribosomal protein L23AA )

HSP 1 Score: 248.8 bits (634), Expect = 2.7e-66
Identity = 137/154 (88.96%), Postives = 142/154 (92.21%), Query Frame = 0 

Query: 1   MAP-KADSSKKADPKAQALKAAKAVKSGPTFKKA-KKIRTSVTFHRPKTLKKDRNPKYPR 60
           M+P K D++KKADPKA+ALKAAKAVKSG  FKK  KKIRT VTFHRPKTL K R  KYP+
Sbjct: 1   MSPAKVDTTKKADPKAKALKAAKAVKSGQAFKKKDKKIRTKVTFHRPKTLTKPRTGKYPK 60

Query: 61  ISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK 120
           ISATPRNKLD YQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK
Sbjct: 61  ISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK 120

Query: 121 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153
           KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154

[Close]
BLAST of Cp4.1LG01g24050 vs. TAIR 10
Match: AT2G39460.2 (ribosomal protein L23AA )

HSP 1 Score: 248.8 bits (634), Expect = 2.7e-66
Identity = 137/154 (88.96%), Postives = 142/154 (92.21%), Query Frame = 0 

Query: 1   MAP-KADSSKKADPKAQALKAAKAVKSGPTFKKA-KKIRTSVTFHRPKTLKKDRNPKYPR 60
           M+P K D++KKADPKA+ALKAAKAVKSG  FKK  KKIRT VTFHRPKTL K R  KYP+
Sbjct: 1   MSPAKVDTTKKADPKAKALKAAKAVKSGQAFKKKDKKIRTKVTFHRPKTLTKPRTGKYPK 60

Query: 61  ISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK 120
           ISATPRNKLD YQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK
Sbjct: 61  ISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK 120

Query: 121 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153
           KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154

[Close]
BLAST of Cp4.1LG01g24050 vs. TAIR 10
Match: AT3G55280.1 (ribosomal protein L23AB )

HSP 1 Score: 247.3 bits (630), Expect = 8.0e-66
Identity = 137/154 (88.96%), Postives = 141/154 (91.56%), Query Frame = 0 

Query: 1   MAP-KADSSKKADPKAQALKAAKAVKSGPTFKK-AKKIRTSVTFHRPKTLKKDRNPKYPR 60
           M+P K D +KKADPKA+ALKAAKAVKSG   KK AKKIRT VTFHRPKTL   R PKYP+
Sbjct: 1   MSPAKVDVTKKADPKAKALKAAKAVKSGQIVKKPAKKIRTKVTFHRPKTLTVPRKPKYPK 60

Query: 61  ISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK 120
           ISATPRNKLD YQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK
Sbjct: 61  ISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK 120

Query: 121 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153
           KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154

[Close]
BLAST of Cp4.1LG01g24050 vs. TAIR 10
Match: AT3G55280.2 (ribosomal protein L23AB )

HSP 1 Score: 247.3 bits (630), Expect = 8.0e-66
Identity = 137/154 (88.96%), Postives = 141/154 (91.56%), Query Frame = 0 

Query: 1   MAP-KADSSKKADPKAQALKAAKAVKSGPTFKK-AKKIRTSVTFHRPKTLKKDRNPKYPR 60
           M+P K D +KKADPKA+ALKAAKAVKSG   KK AKKIRT VTFHRPKTL   R PKYP+
Sbjct: 1   MSPAKVDVTKKADPKAKALKAAKAVKSGQIVKKPAKKIRTKVTFHRPKTLTVPRKPKYPK 60

Query: 61  ISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK 120
           ISATPRNKLD YQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK
Sbjct: 61  ISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK 120

Query: 121 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153
           KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154

[Close]
BLAST of Cp4.1LG01g24050 vs. TAIR 10
Match: AT3G55280.3 (ribosomal protein L23AB )

HSP 1 Score: 240.0 bits (611), Expect = 1.3e-63
Identity = 133/153 (86.93%), Postives = 137/153 (89.54%), Query Frame = 0 

Query: 1   MAP-KADSSKKADPKAQALKAAKAVKSGPTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRI 60
           M+P K D +KKADPKA+ALKAAKAVKSG       KIRT VTFHRPKTL   R PKYP+I
Sbjct: 1   MSPAKVDVTKKADPKAKALKAAKAVKSGQI-----KIRTKVTFHRPKTLTVPRKPKYPKI 60

Query: 61  SATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKK 120
           SATPRNKLD YQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKK
Sbjct: 61  SATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKK 120

Query: 121 VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153
           VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 148

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g24050 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9AT353.2e-6790.9160S ribosomal protein L23a OS=Daucus carota OX=4039 GN=RPL23A PE=2 SV=1[more]
Q077614.6e-6690.2660S ribosomal protein L23a OS=Nicotiana tabacum OX=4097 GN=RPL23A PE=2 SV=1[more]
O226441.0e-6589.6160S ribosomal protein L23A OS=Fritillaria agrestis OX=64177 GN=RPL23A PE=2 SV=1[more]
Q8LD463.9e-6588.9660S ribosomal protein L23a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL23AA PE=2 SV=... [more]
Q9M3C31.1e-6488.9660S ribosomal protein L23a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL23AB PE=2 SV=... [more]
BLAST of Cp4.1LG01g24050 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022922609.13.27e-97100.0060S ribosomal protein L23a-like [Cucurbita moschata] >XP_022990476.1 60S ribosom... [more]
KAG6602342.11.33e-9699.3460S ribosomal protein L23a, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022991052.14.46e-9596.7160S ribosomal protein L23a [Cucurbita maxima][more]
XP_004140408.18.99e-9597.3760S ribosomal protein L23a isoform X1 [Cucumis sativus][more]
XP_022995723.19.31e-9598.6960S ribosomal protein L23a [Cucurbita maxima][more]
BLAST of Cp4.1LG01g24050 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JN211.58e-97100.0050S ribosomal protein L23, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11148... [more]
A0A6J1E3W31.58e-97100.0050S ribosomal protein L23, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1JKM42.16e-9596.7150S ribosomal protein L23, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11148... [more]
A0A0A0KQU44.35e-9597.3750S ribosomal protein L23, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_5G264... [more]
A0A6J1K8U24.51e-9598.6950S ribosomal protein L23, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11149... [more]
BLAST of Cp4.1LG01g24050 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G39460.12.7e-6688.96ribosomal protein L23AA [more]
AT2G39460.22.7e-6688.96ribosomal protein L23AA [more]
AT3G55280.18.0e-6688.96ribosomal protein L23AB [more]
AT3G55280.28.0e-6688.96ribosomal protein L23AB [more]
AT3G55280.31.3e-6386.93ribosomal protein L23AB [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019985Ribosomal protein L23TIGRFAMTIGR03636TIGR03636coord: 76..152
e-value: 4.9E-29
score: 98.5
IPR013025Ribosomal protein L25/L23PFAMPF00276Ribosomal_L23coord: 72..134
e-value: 1.6E-14
score: 54.0
IPR013025Ribosomal protein L25/L23PANTHERPTHR1162060S RIBOSOMAL PROTEIN L23Acoord: 1..152
IPR013025Ribosomal protein L25/L23HAMAPMF_01369_ARibosomal_L23_Acoord: 72..152
score: 22.356056
IPR005633Ribosomal protein L23/L25, N-terminalPFAMPF03939Ribosomal_L23eNcoord: 14..61
e-value: 2.6E-19
score: 69.2
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 33..152
e-value: 3.7E-53
score: 180.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availablePANTHERPTHR11620:SF7860S RIBOSOMAL PROTEIN L23A-2coord: 1..152
IPR001014Ribosomal protein L23/L25, conserved sitePROSITEPS00050RIBOSOMAL_L23coord: 130..145
IPR012678Ribosomal protein L23/L15e core domain superfamilySUPERFAMILY54189Ribosomal proteins S24e, L23 and L15ecoord: 70..145

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g24050.1Cp4.1LG01g24050.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000027 ribosomal large subunit assembly
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003729 mRNA binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome