Cp4.1LG01g21890 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g21890
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	dehydration-responsive element-binding protein 2C-like isoform X1
Location	Cp4.1LG01: 20579047 .. 20580210 (+)
RNA-Seq Expression	Cp4.1LG01g21890
Synteny	Cp4.1LG01g21890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCTGGGTAATCGATATTCTGACGCAATTTCTTTACCTACCAAACGAATTAGGAAGAGGAAGTCACGGAGTAGACGAGATCCATCGACCGTGGCTGAGACTCTTGCTAAGTGGAAGGCTTATAATGAATGTGTTAATTCTTGTGATGATGGAAGCAAGCCAATTCGTAAAGCTCCAGCGAAAGGATCTAAGAAGGGATGTATGAAAGGTAAAGGTGGACCCATGAATTCAAATTGTAAATACAGAGGTGTGAGGCAGAGGACTTGGGGGAAATGGGTTGCGGAGATTCGTGAGCCTGATAGAGGTAGTAGGCTGTGGCTTGGTACTTTCTCTAATGCCATTGAAGCTGCTCTCGCCTATGACGAGGCTGCCAGGACCATGTATGGCCAGACTGCTCGTTTGAACCTTCCCAACATTACAAACACACGGCTGCTAGCAGGCTCTGCCTCGGATTCTTCAACCACCACGTCGACGACAACCACATCATCGAACCAATCTGATGTCTGTGTGTCTGAGGAGCTTACACTGACGCCACAACCTGTCCCCCCAGACGTTAAGATCGAAGGTGAGCCAAGGACCGGGTTCCCAGTTGATCACGTTGCGACATCGGCGATCGATGCTAAATTTTGTGACCAAGGCAATGATCAGGCAGCTCTGTTGGGGATTGAATTTCCCAGTTTGGATCACTTCCCGAACTTTCAAATGGATGAAATGTTCGAGTTGAGGACTAATGACATTGCAATGCCGGTGAGCTTAGAGAAGAAAGTGAAGCATGAAAGTGTCGATGGCGAATATCCCGATCGGAACAGTGATCCATTCGACATCCAGGATGTGCTGCAGGACTTTCAAATAGATGAAATGTTTGATGTGGAGGAGCTTCTAAGCATTATAAATAGTGATTCCATGCATGATCAAAGCTTCTTGCAAGGGAATGTGTATGATTCTAACAACATGGTGCCTCCCCAACCATCAAGCTTATCGAATCAGTTCCGATACCCCGACGAGAAGCTGCTCGGAAGCCTTCAACACATGGAGCAAGCTCCAGCCGACGTCAATCATGGGTTCGATTTCCTGAAGGAGGGGAGGGAGGAGGATCTGAATGCTACAACAGATGATTTTGCAAGATACTTGAATTATGAGATGGGTGGTTTGGGTTTCTGA

mRNA sequence

ATGAGTCTGGGTAATCGATATTCTGACGCAATTTCTTTACCTACCAAACGAATTAGGAAGAGGAAGTCACGGAGTAGACGAGATCCATCGACCGTGGCTGAGACTCTTGCTAAGTGGAAGGCTTATAATGAATGTGTTAATTCTTGTGATGATGGAAGCAAGCCAATTCGCTCTGCCTCGGATTCTTCAACCACCACGTCGACGACAACCACATCATCGAACCAATCTGATGTCTGTGTGTCTGAGGAGCTTACACTGACGCCACAACCTGTCCCCCCAGACGTTAAGATCGAAGGTGAGCCAAGGACCGGGTTCCCAGTTGATCACGTTGCGACATCGGCGATCGATGCTAAATTTTGTGACCAAGGCAATGATCAGGCAGCTCTGTTGGGGATTGAATTTCCCAGTTTGGATCACTTCCCGAACTTTCAAATGGATGAAATGTTCGAGTTGAGGACTAATGACATTGCAATGCCGGTGAGCTTAGAGAAGAAAGTGAAGCATGAAAGTGTCGATGGCGAATATCCCGATCGGAACAGTGATCCATTCGACATCCAGGATGTGCTGCAGGACTTTCAAATAGATGAAATGTTTGATGTGGAGGAGCTTCTAAGCATTATAAATAGTGATTCCATGCATGATCAAAGCTTCTTGCAAGGGAATGTGTATGATTCTAACAACATGGTGCCTCCCCAACCATCAAGCTTATCGAATCAGTTCCGATACCCCGACGAGAAGCTGCTCGGAAGCCTTCAACACATGGAGCAAGCTCCAGCCGACGTCAATCATGGGTTCGATTTCCTGAAGGAGGGGAGGGAGGAGGATCTGAATGCTACAACAGATGATTTTGCAAGATACTTGAATTATGAGATGGGTGGTTTGGGTTTCTGA

Coding sequence (CDS)

ATGAGTCTGGGTAATCGATATTCTGACGCAATTTCTTTACCTACCAAACGAATTAGGAAGAGGAAGTCACGGAGTAGACGAGATCCATCGACCGTGGCTGAGACTCTTGCTAAGTGGAAGGCTTATAATGAATGTGTTAATTCTTGTGATGATGGAAGCAAGCCAATTCGCTCTGCCTCGGATTCTTCAACCACCACGTCGACGACAACCACATCATCGAACCAATCTGATGTCTGTGTGTCTGAGGAGCTTACACTGACGCCACAACCTGTCCCCCCAGACGTTAAGATCGAAGGTGAGCCAAGGACCGGGTTCCCAGTTGATCACGTTGCGACATCGGCGATCGATGCTAAATTTTGTGACCAAGGCAATGATCAGGCAGCTCTGTTGGGGATTGAATTTCCCAGTTTGGATCACTTCCCGAACTTTCAAATGGATGAAATGTTCGAGTTGAGGACTAATGACATTGCAATGCCGGTGAGCTTAGAGAAGAAAGTGAAGCATGAAAGTGTCGATGGCGAATATCCCGATCGGAACAGTGATCCATTCGACATCCAGGATGTGCTGCAGGACTTTCAAATAGATGAAATGTTTGATGTGGAGGAGCTTCTAAGCATTATAAATAGTGATTCCATGCATGATCAAAGCTTCTTGCAAGGGAATGTGTATGATTCTAACAACATGGTGCCTCCCCAACCATCAAGCTTATCGAATCAGTTCCGATACCCCGACGAGAAGCTGCTCGGAAGCCTTCAACACATGGAGCAAGCTCCAGCCGACGTCAATCATGGGTTCGATTTCCTGAAGGAGGGGAGGGAGGAGGATCTGAATGCTACAACAGATGATTTTGCAAGATACTTGAATTATGAGATGGGTGGTTTGGGTTTCTGA

Protein sequence

MSLGNRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIRSASDSSTTTSTTTTSSNQSDVCVSEELTLTPQPVPPDVKIEGEPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMFELRTNDIAMPVSLEKKVKHESVDGEYPDRNSDPFDIQDVLQDFQIDEMFDVEELLSIINSDSMHDQSFLQGNVYDSNNMVPPQPSSLSNQFRYPDEKLLGSLQHMEQAPADVNHGFDFLKEGREEDLNATTDDFARYLNYEMGGLGF

Homology

[Close]

BLAST of Cp4.1LG01g21890 vs. NCBI nr
Match: XP_023535858.1 (dehydration-responsive element-binding protein 2C-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 548 bits (1411), Expect = 2.38e-194
Identity = 296/387 (76.49%), Postives = 296/387 (76.49%), Query Frame = 0


Query: 1   MSLGNRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIR--- 60
           MSLGNRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIR   
Sbjct: 1   MSLGNRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIRKAP 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  AKGSKKGCMKGKGGPMNSNCKYRGVRQRTWGKWVAEIREPDRGSRLWLGTFSNAIEAALA 120

Query: 121 ----------------------------SASDSSTTTSTTTTSSNQSDVCVSEELTLTPQ 180
                                       SASDSSTTTSTTTTSSNQSDVCVSEELTLTPQ
Sbjct: 121 YDEAARTMYGQTARLNLPNITNTRLLAGSASDSSTTTSTTTTSSNQSDVCVSEELTLTPQ 180

Query: 181 PVPPDVKIEGEPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMF 240
           PVPPDVKIEGEPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMF
Sbjct: 181 PVPPDVKIEGEPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMF 240

Query: 241 ELRTNDIAMPVSLEKKVKHESVDGEYPDRNSDPFDIQDVLQDFQIDEMFDVEELLSIINS 296
           ELRTNDIAMPVSLEKKVKHESVDGEYPDRNSDPFDIQDVLQDFQIDEMFDVEELLSIINS
Sbjct: 241 ELRTNDIAMPVSLEKKVKHESVDGEYPDRNSDPFDIQDVLQDFQIDEMFDVEELLSIINS 300

[Close]

BLAST of Cp4.1LG01g21890 vs. NCBI nr
Match: XP_023521653.1 (dehydration-responsive element-binding protein 2C-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 542 bits (1396), Expect = 4.57e-192
Identity = 293/387 (75.71%), Postives = 295/387 (76.23%), Query Frame = 0


Query: 1   MSLGNRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIR--- 60
           MSL ++YSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIR   
Sbjct: 1   MSLSDQYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIRKAP 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  AKGSKKGCMKGKGGPMNSNCKYRGVRQRTWGKWVAEIREPDRGSRLWLGTFSNAIEAALA 120

Query: 121 ----------------------------SASDSSTTTSTTTTSSNQSDVCVSEELTLTPQ 180
                                       SASDSSTTTSTTTTSSNQSDVCVSEELTLTPQ
Sbjct: 121 YDEAARTMYGQTARLNLPNITNTRLLAGSASDSSTTTSTTTTSSNQSDVCVSEELTLTPQ 180

Query: 181 PVPPDVKIEGEPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMF 240
           PVPPDVKIEGEPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMF
Sbjct: 181 PVPPDVKIEGEPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMF 240

Query: 241 ELRTNDIAMPVSLEKKVKHESVDGEYPDRNSDPFDIQDVLQDFQIDEMFDVEELLSIINS 296
           ELRTNDIAMPVSLEKKVKHESVDGEYPDRNSDPFDIQDVLQDFQIDEMFDVEELLSIINS
Sbjct: 241 ELRTNDIAMPVSLEKKVKHESVDGEYPDRNSDPFDIQDVLQDFQIDEMFDVEELLSIINS 300

[Close]

BLAST of Cp4.1LG01g21890 vs. NCBI nr
Match: XP_022922977.1 (dehydration-responsive element-binding protein 2C-like isoform X3 [Cucurbita moschata] >XP_022922984.1 dehydration-responsive element-binding protein 2C-like isoform X4 [Cucurbita moschata])

HSP 1 Score: 526 bits (1354), Expect = 1.22e-185
Identity = 286/389 (73.52%), Postives = 292/389 (75.06%), Query Frame = 0


Query: 1   MSLGNRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIR--- 60
           MSLG+RYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIR   
Sbjct: 1   MSLGDRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIRKAP 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  AKGSKKGCMKGKGGPMNSNCKYRGVRQRTWGKWVAEIREPDRGSRLWLGTFSNAIEAALA 120

Query: 121 ----------------------------SASDSSTTTSTTTTSSNQSDVCVSEELTLTPQ 180
                                       SASDSSTTTSTTTTSSNQSDVCVSEELT+TPQ
Sbjct: 121 YDEAARTMYGQTARLNLPNITNTRLLAGSASDSSTTTSTTTTSSNQSDVCVSEELTMTPQ 180

Query: 181 PVPPDVKIEGEPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMF 240
           PVPPDVKIEGEPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPS+DHFPNFQMDEMF
Sbjct: 181 PVPPDVKIEGEPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSMDHFPNFQMDEMF 240

Query: 241 ELRTNDIAMPVSLEKKVKHESVDG--EYPDRNSDPFDIQDVLQDFQIDEMFDVEELLSII 296
           ELRT+DIA+PVSLEKKVKHESVDG  EYPDR+SDPFDIQDVLQDFQIDEMFDVEELLSII
Sbjct: 241 ELRTSDIAIPVSLEKKVKHESVDGDDEYPDRSSDPFDIQDVLQDFQIDEMFDVEELLSII 300

[Close]

BLAST of Cp4.1LG01g21890 vs. NCBI nr
Match: KAG6602606.1 (Dehydration-responsive element-binding protein 2C, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 521 bits (1342), Expect = 8.16e-184
Identity = 283/389 (72.75%), Postives = 290/389 (74.55%), Query Frame = 0


Query: 1   MSLGNRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIRSA- 60
           MSLG+RYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIR A 
Sbjct: 1   MSLGDRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIRKAP 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  AKGSKKGCMKGKGGPMNSNCKYRGVRQRTWGKWVAEIREPDRGSRLWLGTFSNAIEAALA 120

Query: 121 ------------------------------SDSSTTTSTTTTSSNQSDVCVSEELTLTPQ 180
                                         SDSSTTTSTTTTSSNQSDVCVSEELT+TPQ
Sbjct: 121 YDEAARTMYGQTARLNLPNITNTRLLAGSTSDSSTTTSTTTTSSNQSDVCVSEELTMTPQ 180

Query: 181 PVPPDVKIEGEPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMF 240
           PVPPDVKIEGEPRTGFPVDH ATSAIDAKFCDQGNDQAALLGIEFPS+DHFPNFQMDEMF
Sbjct: 181 PVPPDVKIEGEPRTGFPVDHAATSAIDAKFCDQGNDQAALLGIEFPSMDHFPNFQMDEMF 240

Query: 241 ELRTNDIAMPVSLEKKVKHESVDG--EYPDRNSDPFDIQDVLQDFQIDEMFDVEELLSII 296
           ELRT+DIA+PVSLEKKVKHESVDG  EYPDR+SDPFDIQDVLQDFQIDEMFDVEELLSII
Sbjct: 241 ELRTSDIAIPVSLEKKVKHESVDGDGEYPDRSSDPFDIQDVLQDFQIDEMFDVEELLSII 300

[Close]

BLAST of Cp4.1LG01g21890 vs. NCBI nr
Match: XP_023535865.1 (dehydration-responsive element-binding protein 2C-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 514 bits (1323), Expect = 3.99e-181
Identity = 278/369 (75.34%), Postives = 278/369 (75.34%), Query Frame = 0


Query: 19  RKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIR--------------------- 78
           RKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIR                     
Sbjct: 8   RKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIRKAPAKGSKKGCMKGKGGPMNS 67

Query: 79  ------------------------------------------------------------ 138
                                                                       
Sbjct: 68  NCKYRGVRQRTWGKWVAEIREPDRGSRLWLGTFSNAIEAALAYDEAARTMYGQTARLNLP 127

Query: 139 ----------SASDSSTTTSTTTTSSNQSDVCVSEELTLTPQPVPPDVKIEGEPRTGFPV 198
                     SASDSSTTTSTTTTSSNQSDVCVSEELTLTPQPVPPDVKIEGEPRTGFPV
Sbjct: 128 NITNTRLLAGSASDSSTTTSTTTTSSNQSDVCVSEELTLTPQPVPPDVKIEGEPRTGFPV 187

Query: 199 DHVATSAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMFELRTNDIAMPVSLEKKVK 258
           DHVATSAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMFELRTNDIAMPVSLEKKVK
Sbjct: 188 DHVATSAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMFELRTNDIAMPVSLEKKVK 247

Query: 259 HESVDGEYPDRNSDPFDIQDVLQDFQIDEMFDVEELLSIINSDSMHDQSFLQGNVYDSNN 296
           HESVDGEYPDRNSDPFDIQDVLQDFQIDEMFDVEELLSIINSDSMHDQSFLQGNVYDSNN
Sbjct: 248 HESVDGEYPDRNSDPFDIQDVLQDFQIDEMFDVEELLSIINSDSMHDQSFLQGNVYDSNN 307

[Close]

BLAST of Cp4.1LG01g21890 vs. ExPASy TrEMBL
Match: A0A6J1E4V9 (dehydration-responsive element-binding protein 2C-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111430785 PE=4 SV=1)

HSP 1 Score: 526 bits (1354), Expect = 5.89e-186
Identity = 286/389 (73.52%), Postives = 292/389 (75.06%), Query Frame = 0


Query: 1   MSLGNRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIR--- 60
           MSLG+RYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIR   
Sbjct: 1   MSLGDRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIRKAP 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  AKGSKKGCMKGKGGPMNSNCKYRGVRQRTWGKWVAEIREPDRGSRLWLGTFSNAIEAALA 120

Query: 121 ----------------------------SASDSSTTTSTTTTSSNQSDVCVSEELTLTPQ 180
                                       SASDSSTTTSTTTTSSNQSDVCVSEELT+TPQ
Sbjct: 121 YDEAARTMYGQTARLNLPNITNTRLLAGSASDSSTTTSTTTTSSNQSDVCVSEELTMTPQ 180

Query: 181 PVPPDVKIEGEPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMF 240
           PVPPDVKIEGEPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPS+DHFPNFQMDEMF
Sbjct: 181 PVPPDVKIEGEPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSMDHFPNFQMDEMF 240

Query: 241 ELRTNDIAMPVSLEKKVKHESVDG--EYPDRNSDPFDIQDVLQDFQIDEMFDVEELLSII 296
           ELRT+DIA+PVSLEKKVKHESVDG  EYPDR+SDPFDIQDVLQDFQIDEMFDVEELLSII
Sbjct: 241 ELRTSDIAIPVSLEKKVKHESVDGDDEYPDRSSDPFDIQDVLQDFQIDEMFDVEELLSII 300

[Close]

BLAST of Cp4.1LG01g21890 vs. ExPASy TrEMBL
Match: A0A6J1E8A4 (dehydration-responsive element-binding protein 2C-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430785 PE=4 SV=1)

HSP 1 Score: 513 bits (1320), Expect = 2.00e-180
Identity = 286/412 (69.42%), Postives = 292/412 (70.87%), Query Frame = 0


Query: 1   MSLGNRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIR--- 60
           MSLG+RYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIR   
Sbjct: 1   MSLGDRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIRKAP 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  AKGSKKGCMKGKGGPMNSNCKYRGVRQRTWGKWVAEIREPDRGSRLWLGTFSNAIEAALA 120

Query: 121 ----------------------------SASDSSTTTSTTTTSSNQSDVCVSEELTLTPQ 180
                                       SASDSSTTTSTTTTSSNQSDVCVSEELT+TPQ
Sbjct: 121 YDEAARTMYGQTARLNLPNITNTRLLAGSASDSSTTTSTTTTSSNQSDVCVSEELTMTPQ 180

Query: 181 PVPPDVKIEGEPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMF 240
           PVPPDVKIEGEPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPS+DHFPNFQMDEMF
Sbjct: 181 PVPPDVKIEGEPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSMDHFPNFQMDEMF 240

Query: 241 ELRTNDIAMPVSLEKK-----------------------VKHESVDG--EYPDRNSDPFD 296
           ELRT+DIA+PVSLEKK                       VKHESVDG  EYPDR+SDPFD
Sbjct: 241 ELRTSDIAIPVSLEKKFQMDEMFELRTSDIAIPVSLEKKVKHESVDGDDEYPDRSSDPFD 300

[Close]

BLAST of Cp4.1LG01g21890 vs. ExPASy TrEMBL
Match: A0A6J1JR01 (dehydration-responsive element-binding protein 2C-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487548 PE=4 SV=1)

HSP 1 Score: 510 bits (1314), Expect = 6.03e-180
Identity = 277/384 (72.14%), Postives = 284/384 (73.96%), Query Frame = 0


Query: 1   MSLGNRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIR--- 60
           MSLG+RYSDAI LP KRIRKRKSRS RDPSTVAETLAKWKAYNECVNSCDDGSKPIR   
Sbjct: 1   MSLGDRYSDAIYLPAKRIRKRKSRSGRDPSTVAETLAKWKAYNECVNSCDDGSKPIRKAP 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  AKGSKKGCMKGKGGPMNSNCNYRGVRQRTWGKWVAEIREPDRGSRLWLGTFSNALEAALA 120

Query: 121 ----------------------------SASDSSTTTSTTTTSSNQSDVCVSEELTLTPQ 180
                                       SASDSSTTTSTTTTSSNQS+V VSEELT+TPQ
Sbjct: 121 YDEAARTMYGHTARLNLPKITNTGLLAGSASDSSTTTSTTTTSSNQSEVRVSEELTMTPQ 180

Query: 181 PVPPDVKIEGEPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMF 240
           PVPPDVKIEGEPRTGFPVDH+ATSA+DAKFCDQGNDQAALLGIEFP LDHFPNFQMDEM+
Sbjct: 181 PVPPDVKIEGEPRTGFPVDHIATSALDAKFCDQGNDQAALLGIEFPRLDHFPNFQMDEMY 240

Query: 241 ELRTNDIAMPVSLEKKVKHESVDGEYPDRNSDPFDIQDVLQDFQIDEMFDVEELLSIINS 293
           E RTNDIAMPVSLEKKVKHESVDGEYPD +SDPFDIQDVLQDFQIDEMFDVEELLSIINS
Sbjct: 241 EFRTNDIAMPVSLEKKVKHESVDGEYPDWSSDPFDIQDVLQDFQIDEMFDVEELLSIINS 300

[Close]

BLAST of Cp4.1LG01g21890 vs. ExPASy TrEMBL
Match: A0A6J1JNV8 (dehydration-responsive element-binding protein 2C-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487548 PE=4 SV=1)

HSP 1 Score: 483 bits (1242), Expect = 3.69e-169
Identity = 262/366 (71.58%), Postives = 268/366 (73.22%), Query Frame = 0


Query: 19  RKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIR--------------------- 78
           RKRKSRS RDPSTVAETLAKWKAYNECVNSCDDGSKPIR                     
Sbjct: 8   RKRKSRSGRDPSTVAETLAKWKAYNECVNSCDDGSKPIRKAPAKGSKKGCMKGKGGPMNS 67

Query: 79  ------------------------------------------------------------ 138
                                                                       
Sbjct: 68  NCNYRGVRQRTWGKWVAEIREPDRGSRLWLGTFSNALEAALAYDEAARTMYGHTARLNLP 127

Query: 139 ----------SASDSSTTTSTTTTSSNQSDVCVSEELTLTPQPVPPDVKIEGEPRTGFPV 198
                     SASDSSTTTSTTTTSSNQS+V VSEELT+TPQPVPPDVKIEGEPRTGFPV
Sbjct: 128 KITNTGLLAGSASDSSTTTSTTTTSSNQSEVRVSEELTMTPQPVPPDVKIEGEPRTGFPV 187

Query: 199 DHVATSAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMFELRTNDIAMPVSLEKKVK 258
           DH+ATSA+DAKFCDQGNDQAALLGIEFP LDHFPNFQMDEM+E RTNDIAMPVSLEKKVK
Sbjct: 188 DHIATSALDAKFCDQGNDQAALLGIEFPRLDHFPNFQMDEMYEFRTNDIAMPVSLEKKVK 247

Query: 259 HESVDGEYPDRNSDPFDIQDVLQDFQIDEMFDVEELLSIINSDSMHDQSFLQGNVYDSNN 293
           HESVDGEYPD +SDPFDIQDVLQDFQIDEMFDVEELLSIINSDSMHDQSFLQGNVYDSNN
Sbjct: 248 HESVDGEYPDWSSDPFDIQDVLQDFQIDEMFDVEELLSIINSDSMHDQSFLQGNVYDSNN 307

[Close]

BLAST of Cp4.1LG01g21890 vs. ExPASy TrEMBL
Match: A0A6J1EAB0 (dehydration-responsive element-binding protein 2C-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430785 PE=4 SV=1)

HSP 1 Score: 481 bits (1237), Expect = 5.71e-168
Identity = 269/394 (68.27%), Postives = 274/394 (69.54%), Query Frame = 0


Query: 19  RKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIR--------------------- 78
           RKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIR                     
Sbjct: 8   RKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIRKAPAKGSKKGCMKGKGGPMNS 67

Query: 79  ------------------------------------------------------------ 138
                                                                       
Sbjct: 68  NCKYRGVRQRTWGKWVAEIREPDRGSRLWLGTFSNAIEAALAYDEAARTMYGQTARLNLP 127

Query: 139 ----------SASDSSTTTSTTTTSSNQSDVCVSEELTLTPQPVPPDVKIEGEPRTGFPV 198
                     SASDSSTTTSTTTTSSNQSDVCVSEELT+TPQPVPPDVKIEGEPRTGFPV
Sbjct: 128 NITNTRLLAGSASDSSTTTSTTTTSSNQSDVCVSEELTMTPQPVPPDVKIEGEPRTGFPV 187

Query: 199 DHVATSAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMFELRTNDIAMPVSLEKK-- 258
           DHVATSAIDAKFCDQGNDQAALLGIEFPS+DHFPNFQMDEMFELRT+DIA+PVSLEKK  
Sbjct: 188 DHVATSAIDAKFCDQGNDQAALLGIEFPSMDHFPNFQMDEMFELRTSDIAIPVSLEKKFQ 247

Query: 259 ---------------------VKHESVDG--EYPDRNSDPFDIQDVLQDFQIDEMFDVEE 296
                                VKHESVDG  EYPDR+SDPFDIQDVLQDFQIDEMFDVEE
Sbjct: 248 MDEMFELRTSDIAIPVSLEKKVKHESVDGDDEYPDRSSDPFDIQDVLQDFQIDEMFDVEE 307

[Close]

BLAST of Cp4.1LG01g21890 vs. TAIR 10
Match: AT2G40340.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 45.4 bits (106), Expect = 9.0e-05
Identity = 28/91 (30.77%), Postives = 47/91 (51.65%), Query Frame = 0


Query: 191 DFQIDEMFDVEELLSIINSDSMHDQSFLQGNVYDSNNMVPPQPSSLSNQFRYPDEKLLGS 250
           +F +DE FD+ ELL I+N +++  Q  +Q  V         +  + S Q ++P+  LLGS
Sbjct: 235 EFGVDETFDINELLGILNDNNVSGQETMQYQV--------DRHPNFSYQTQFPNSNLLGS 294

Query: 251 LQHMEQAPADVNHGFDFLKEGREEDLNATTD 282
           L  ME A   V++G  +++    E+     D
Sbjct: 295 LNPMEIAQPGVDYGCPYVQPSDMENYGIDLD 317

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g21890 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g21890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023535858.1	2.38e-194	76.49	dehydration-responsive element-binding protein 2C-like isoform X1 [Cucurbita pep...	[more]
XP_023521653.1	4.57e-192	75.71	dehydration-responsive element-binding protein 2C-like [Cucurbita pepo subsp. pe...	[more]
XP_022922977.1	1.22e-185	73.52	dehydration-responsive element-binding protein 2C-like isoform X3 [Cucurbita mos...	[more]
KAG6602606.1	8.16e-184	72.75	Dehydration-responsive element-binding protein 2C, partial [Cucurbita argyrosper...	[more]
XP_023535865.1	3.99e-181	75.34	dehydration-responsive element-binding protein 2C-like isoform X2 [Cucurbita pep...	[more]

BLAST of Cp4.1LG01g21890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E4V9	5.89e-186	73.52	dehydration-responsive element-binding protein 2C-like isoform X3 OS=Cucurbita m...	[more]
A0A6J1E8A4	2.00e-180	69.42	dehydration-responsive element-binding protein 2C-like isoform X1 OS=Cucurbita m...	[more]
A0A6J1JR01	6.03e-180	72.14	dehydration-responsive element-binding protein 2C-like isoform X1 OS=Cucurbita m...	[more]
A0A6J1JNV8	3.69e-169	71.58	dehydration-responsive element-binding protein 2C-like isoform X2 OS=Cucurbita m...	[more]
A0A6J1EAB0	5.71e-168	68.27	dehydration-responsive element-binding protein 2C-like isoform X2 OS=Cucurbita m...	[more]

BLAST of Cp4.1LG01g21890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40340.1	9.0e-05	30.77	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g21890.1	Cp4.1LG01g21890.1	mRNA